Cla020904 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla020904
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	CG2446-PA (Fragment) (AHRD V1 **-- A9YGJ8_DROSI)
Location	Chr5 : 25734851 .. 25736261 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAATTCTCAAACTCTGCTCCAAGTCTCTGGAGAGAAGCTCTCTCTTCTTATCCATCCAAAATCGAAGCCCTAGGCAAGCCCAATTTGGTTTCTCTCGATGATTTTTACCGAAACGAACTCCCTCTTCTTCTCCACGAGCGAAACCCTAGCCCTTACATCACTACTTCTGAGCTCTCAAAACTCATGCAATGGAAGCTCACTCGAGGAAAATGGAGGTACCCGGTGCTCAGTGCTCTCTATCTCTGTCTTTTTATTTAGGTTTCAACGATTATTTATCAATTTCATGTACAATGACTAAACGAATTTCAGGCCGCGTCTCTTAGACTTCGTTTCGTCATTGGACGAATCCCTCGTCAAATTGGCTTCTCAAAAGGCCTTTCAATGCCTTCCTGATATTTCTAAAGCCGTGTCTGAGCTTACGCCACTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCAGTTCTGGCTGCTTACGCGCCGGATATTGCGCCTTTCATGTCCGACGAGGTGAAATCAGGATAAATGTTGATGCAATTAGATCATCAGTAGCCATTGATTTCTGCATTTTAAGTTTTGAATATTTGTTACGCTTAGATTTCTAACTTCTGATGGTGAAGAAGTAGGCTATGGAGGCGGCTCTAGGCAACTCCAAGGATTATTCGTTGAAGCAATACTTATCGTTCGCAAAGAAGTTGCAAGATAAAGCCAAGGTCTGTTAGCTAATTTCTCCAATTATGTCGCTTGTTTTGTGTATTATGTGAGGAAATTAAGTTCGTTTCTAGAATCCTACAAATTGGGACGCATTTCTGTTTCCATCCTTCAGGCATCACTTTCTTTCTTTCTTTCTTTCTTCACATTGACATTGCTCTGCTTTGTTTTGACTTTATGATGAACCTAGCCCTGAAAGGATTTGTTCCTCAAACCCATGATACGAGCTTAGCATTCTAAAATTGAAGTGTTGTTTCAAACTGAGTTTCCAAAACCTAGGCTTGTGTAACGTGTTTTATTTGTGAATTTATAGTTTGTAATTTGTAAATGTCTGTATTTATCATCAATTCTTGATTTGTATGTATGGGTTTTGTTTATTTTGTGAGATTAACAACCTTGGAATGTGGAATAATAAAGGCACGAGCTAAAACACAACCTTGATTTCTGTATCTTAGACTACAAGCTTAACTTAAAGTCAAACATTCTAATTGTTCAATGGAAGCGGCTGCCAAATATTATTGTTCTTTATGGAATTTGCAGGAATTAAGCTCAGAAGGACAAAATTTCACACCATCGGACGTAGAGAGGGCTTTGTGGAGTATAGCTATAGGGGAAAAATTCAAAGGTTCACAATCAGAATTAGAGCCCAAGAAGGAAGGCAAAACTGGGACCAAAAGAAAGAGAAAAACATCCAAGTGA

mRNA sequence

ATGATGGAATTCTCAAACTCTGCTCCAAGTCTCTGGAGAGAAGCTCTCTCTTCTTATCCATCCAAAATCGAAGCCCTAGGCAAGCCCAATTTGGTTTCTCTCGATGATTTTTACCGAAACGAACTCCCTCTTCTTCTCCACGAGCGAAACCCTAGCCCTTACATCACTACTTCTGAGCTCTCAAAACTCATGCAATGGAAGCTCACTCGAGGAAAATGGAGGCCGCGTCTCTTAGACTTCGTTTCGTCATTGGACGAATCCCTCGTCAAATTGGCTTCTCAAAAGGCCTTTCAATGCCTTCCTGATATTTCTAAAGCCGTGTCTGAGCTTACGCCACTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCAGTTCTGGCTGCTTACGCGCCGGATATTGCGCCTTTCATGTCCGACGAGGCTATGGAGGCGGCTCTAGGCAACTCCAAGGATTATTCGTTGAAGCAATACTTATCGTTCGCAAAGAAGTTGCAAGATAAAGCCAAGGAATTAAGCTCAGAAGGACAAAATTTCACACCATCGGACGTAGAGAGGGCTTTGTGGAGTATAGCTATAGGGGAAAAATTCAAAGGTTCACAATCAGAATTAGAGCCCAAGAAGGAAGGCAAAACTGGGACCAAAAGAAAGAGAAAAACATCCAAGTGA

Coding sequence (CDS)

ATGATGGAATTCTCAAACTCTGCTCCAAGTCTCTGGAGAGAAGCTCTCTCTTCTTATCCATCCAAAATCGAAGCCCTAGGCAAGCCCAATTTGGTTTCTCTCGATGATTTTTACCGAAACGAACTCCCTCTTCTTCTCCACGAGCGAAACCCTAGCCCTTACATCACTACTTCTGAGCTCTCAAAACTCATGCAATGGAAGCTCACTCGAGGAAAATGGAGGCCGCGTCTCTTAGACTTCGTTTCGTCATTGGACGAATCCCTCGTCAAATTGGCTTCTCAAAAGGCCTTTCAATGCCTTCCTGATATTTCTAAAGCCGTGTCTGAGCTTACGCCACTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCAGTTCTGGCTGCTTACGCGCCGGATATTGCGCCTTTCATGTCCGACGAGGCTATGGAGGCGGCTCTAGGCAACTCCAAGGATTATTCGTTGAAGCAATACTTATCGTTCGCAAAGAAGTTGCAAGATAAAGCCAAGGAATTAAGCTCAGAAGGACAAAATTTCACACCATCGGACGTAGAGAGGGCTTTGTGGAGTATAGCTATAGGGGAAAAATTCAAAGGTTCACAATCAGAATTAGAGCCCAAGAAGGAAGGCAAAACTGGGACCAAAAGAAAGAGAAAAACATCCAAGTGA

Protein sequence

MMEFSNSAPSLWREALSSYPSKIEALGKPNLVSLDDFYRNELPLLLHERNPSPYITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATASAVLAAYAPDIAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQNFTPSDVERALWSIAIGEKFKGSQSELEPKKEGKTGTKRKRKTSK

Homology

[Close]

BLAST of Cla020904 vs. TrEMBL
Match: A0A0A0L3W6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G645280 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 3.7e-105
Identity = 196/220 (89.09%), Postives = 207/220 (94.09%), Query Frame = 1


Query: 1   MMEFSNSAPSLWREALSSYPSKIEALGKPNLVSLDDFYRNELPLLLHERNPSPYITTSEL 60
           MMEFS S P+LWREALS+Y S+IEALGKPNLVSLDDFYRNELPL+LH+RNPSPYITTSEL
Sbjct: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDIAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQNFTPS 180
           ASAVLAAYAPD+APFMSDEAMEAALGNSKDYSLKQYL FA KL+ KAKELS EG+ FTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPS 180

Query: 181 DVERALWSIAIGEKFKGSQSELEPKKEGKTGTKRKRKTSK 221
           DVERALWS AIGEK KGS+S+L+P   GKTGTKRKRKTSK
Sbjct: 181 DVERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK 220

[Close]

BLAST of Cla020904 vs. TrEMBL
Match: M5XSQ2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011235mg PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 7.1e-88
Identity = 168/217 (77.42%), Postives = 189/217 (87.10%), Query Frame = 1


Query: 2   MEFSNSAPSLWREALSSYPSKIEALGKPNLVSLDDFYRNELPLLLHERNPSPYITTSELS 61
           MEF  SAPSLWREALSSY S+I++L KPNLVSLDDFYRN LP LLH+RNPSP+ITTSELS
Sbjct: 1   MEFECSAPSLWREALSSYSSRIQSLNKPNLVSLDDFYRNALPSLLHQRNPSPFITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
            LM+WKLTRGKWRPRLLDFVS+LDE++VK ASQKAFQ LPDISKA+SELT LKG+GPATA
Sbjct: 61  DLMRWKLTRGKWRPRLLDFVSALDEAVVKSASQKAFQALPDISKAISELTVLKGLGPATA 120

Query: 122 SAVLAAYAPDIAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQNFTPSD 181
           SAVLAAYAPD+APFMSDEAM AALGNSKDY+LKQYL F  KLQ+KAKEL++EG+ FTPSD
Sbjct: 121 SAVLAAYAPDVAPFMSDEAMVAALGNSKDYTLKQYLLFVNKLQEKAKELTAEGETFTPSD 180

Query: 182 VERALWSIAIGEKFKGSQSELEPKKE-GKTGTKRKRK 218
           VERALWS A+G K   SQS+ + K +  K   KRKRK
Sbjct: 181 VERALWSGAVGAKLPSSQSDPDLKTDKSKNPNKRKRK 217

[Close]

BLAST of Cla020904 vs. TrEMBL
Match: A0A061FEA1_THECC (Gb:AAF48080.1 OS=Theobroma cacao GN=TCM_034642 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.5e-85
Identity = 162/214 (75.70%), Postives = 186/214 (86.92%), Query Frame = 1


Query: 2   MEFSNSAPSLWREALSSYPSKIEALGKPNLVSLDDFYRNELPLLLHERNPSPYITTSELS 61
           + F  +  S+W+EA+SSY S+IE+L KPNLVSLD+FYRNELP LLH+RNP+P+ITTSELS
Sbjct: 3   LHFECTDLSIWKEAISSYKSRIESLDKPNLVSLDEFYRNELPPLLHQRNPNPFITTSELS 62

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           +LMQWKLTRGKWRPRLLDFVSSLD+SLVK ASQKAFQ LPDISKAVSELT LKGVGPATA
Sbjct: 63  RLMQWKLTRGKWRPRLLDFVSSLDDSLVKSASQKAFQSLPDISKAVSELTVLKGVGPATA 122

Query: 122 SAVLAAYAPDIAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQNFTPSD 181
           SAVLAAYAP+ APFMSDEAMEAALGNSKDYSLKQYL F  K+Q K+KELSS+G +FTPSD
Sbjct: 123 SAVLAAYAPETAPFMSDEAMEAALGNSKDYSLKQYLLFVDKIQSKSKELSSKGDSFTPSD 182

Query: 182 VERALWSIAIGEKFKGSQSELEPKKEGKTGTKRK 216
           VERALWS A+G K + SQ+ L+ K +G    KR+
Sbjct: 183 VERALWSSAVGIKLQSSQAVLDNKMKGSNKRKRR 216

[Close]

BLAST of Cla020904 vs. TrEMBL
Match: M5W816_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022189mg PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.8e-84
Identity = 160/206 (77.67%), Postives = 181/206 (87.86%), Query Frame = 1


Query: 2   MEFSNSAPSLWREALSSYPSKIEALGKPNLVSLDDFYRNELPLLLHERNPSPYITTSELS 61
           MEF  SAPSLWREALSSY S+I++L KPNLVSLDDFYRN LP LLH+ NPSP+ITTSELS
Sbjct: 1   MEFECSAPSLWREALSSYSSRIQSLNKPNLVSLDDFYRNALPSLLHQGNPSPFITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
            LM+WKLTRGKWRPRLLDFVS+LDE++VK ASQKAFQ LPDISKA+SELT LKG+GPATA
Sbjct: 61  DLMRWKLTRGKWRPRLLDFVSALDEAVVKSASQKAFQALPDISKAISELTVLKGLGPATA 120

Query: 122 SAVLAAYAPDIAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQNFTPSD 181
           SAVLAAYAPD+APFMSDEAM AALGNSKDY+LKQYL F  KLQ+KAKEL++E + FTPSD
Sbjct: 121 SAVLAAYAPDVAPFMSDEAMVAALGNSKDYTLKQYLLFVNKLQEKAKELTAEWETFTPSD 180

Query: 182 VERALWSIAIGEKFKGSQSELEPKKE 208
           VERALWS A+G K   SQS+ + K +
Sbjct: 181 VERALWSGAVGAKLPSSQSDPDLKTD 206

[Close]

BLAST of Cla020904 vs. TrEMBL
Match: F6H169_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g08560 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.0e-82
Identity = 161/216 (74.54%), Postives = 181/216 (83.80%), Query Frame = 1


Query: 2   MEFSNSAPSLWREALSSYPSKIEALGKPNLVSLDDFYRNELPLLLHERNPSPYITTSELS 61
           M+F     S+W+EALSSY ++I +L KP LVSLDDFY N+LP L+ +RNP+PYITTSELS
Sbjct: 1   MDFQCLNRSVWKEALSSYSARIVSLNKPQLVSLDDFYCNQLPALIRQRNPNPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDE+LVK ASQKAFQ LPDISKA+SELT LKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDEALVKSASQKAFQSLPDISKAISELTVLKGVGPATA 120

Query: 122 SAVLAAYAPDIAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQNFTPSD 181
           SA+LAAYAPD+APFMSDEAM AALGNSKDY+LKQYL FA KLQ+KA+ELS EG ++TPSD
Sbjct: 121 SALLAAYAPDVAPFMSDEAMVAALGNSKDYTLKQYLVFADKLQNKARELSVEGDSYTPSD 180

Query: 182 VERALWSIAIGEKFKGSQSELEPKKEGKTGTKRKRK 218
           VERALWS A+G K   S     P  E K  TKRKRK
Sbjct: 181 VERALWSSAVGTKLLDSL----PNSEPKVNTKRKRK 212

[Close]

BLAST of Cla020904 vs. NCBI nr
Match: gi|659103680|ref|XP_008452684.1| (PREDICTED: uncharacterized protein LOC103493629 isoform X1 [Cucumis melo])

HSP 1 Score: 392.1 bits (1006), Expect = 6.3e-106
Identity = 196/219 (89.50%), Postives = 207/219 (94.52%), Query Frame = 1


Query: 2   MEFSNSAPSLWREALSSYPSKIEALGKPNLVSLDDFYRNELPLLLHERNPSPYITTSELS 61
           M+FSNS P+LWREALSSY S+IEALGKPNLVSLDDFYRNELPL+LH+R PSPYITTSELS
Sbjct: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDIAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQNFTPSD 181
           SA+LAAYAPD+APFMSDEAMEAALGNSKDYSLKQYL FA KLQ+KAKELS EG+ FTPSD
Sbjct: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180

Query: 182 VERALWSIAIGEKFKGSQSELEPKKEGKTGTKRKRKTSK 221
           VERALWS AIGEK KGSQS+L+P   GKTGTKRKRKTSK
Sbjct: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 219

[Close]

BLAST of Cla020904 vs. NCBI nr
Match: gi|449447089|ref|XP_004141302.1| (PREDICTED: uncharacterized protein LOC101204707 isoform X1 [Cucumis sativus])

HSP 1 Score: 389.0 bits (998), Expect = 5.4e-105
Identity = 196/220 (89.09%), Postives = 207/220 (94.09%), Query Frame = 1


Query: 1   MMEFSNSAPSLWREALSSYPSKIEALGKPNLVSLDDFYRNELPLLLHERNPSPYITTSEL 60
           MMEFS S P+LWREALS+Y S+IEALGKPNLVSLDDFYRNELPL+LH+RNPSPYITTSEL
Sbjct: 1   MMEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSEL 60

Query: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120
           SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT
Sbjct: 61  SKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPAT 120

Query: 121 ASAVLAAYAPDIAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQNFTPS 180
           ASAVLAAYAPD+APFMSDEAMEAALGNSKDYSLKQYL FA KL+ KAKELS EG+ FTPS
Sbjct: 121 ASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPS 180

Query: 181 DVERALWSIAIGEKFKGSQSELEPKKEGKTGTKRKRKTSK 221
           DVERALWS AIGEK KGS+S+L+P   GKTGTKRKRKTSK
Sbjct: 181 DVERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK 220

[Close]

BLAST of Cla020904 vs. NCBI nr
Match: gi|596187364|ref|XP_007223399.1| (hypothetical protein PRUPE_ppa011235mg [Prunus persica])

HSP 1 Score: 331.6 bits (849), Expect = 1.0e-87
Identity = 168/217 (77.42%), Postives = 189/217 (87.10%), Query Frame = 1


Query: 2   MEFSNSAPSLWREALSSYPSKIEALGKPNLVSLDDFYRNELPLLLHERNPSPYITTSELS 61
           MEF  SAPSLWREALSSY S+I++L KPNLVSLDDFYRN LP LLH+RNPSP+ITTSELS
Sbjct: 1   MEFECSAPSLWREALSSYSSRIQSLNKPNLVSLDDFYRNALPSLLHQRNPSPFITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
            LM+WKLTRGKWRPRLLDFVS+LDE++VK ASQKAFQ LPDISKA+SELT LKG+GPATA
Sbjct: 61  DLMRWKLTRGKWRPRLLDFVSALDEAVVKSASQKAFQALPDISKAISELTVLKGLGPATA 120

Query: 122 SAVLAAYAPDIAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQNFTPSD 181
           SAVLAAYAPD+APFMSDEAM AALGNSKDY+LKQYL F  KLQ+KAKEL++EG+ FTPSD
Sbjct: 121 SAVLAAYAPDVAPFMSDEAMVAALGNSKDYTLKQYLLFVNKLQEKAKELTAEGETFTPSD 180

Query: 182 VERALWSIAIGEKFKGSQSELEPKKE-GKTGTKRKRK 218
           VERALWS A+G K   SQS+ + K +  K   KRKRK
Sbjct: 181 VERALWSGAVGAKLPSSQSDPDLKTDKSKNPNKRKRK 217

[Close]

BLAST of Cla020904 vs. NCBI nr
Match: gi|645227220|ref|XP_008220412.1| (PREDICTED: uncharacterized protein LOC103320504 [Prunus mume])

HSP 1 Score: 327.8 bits (839), Expect = 1.5e-86
Identity = 167/217 (76.96%), Postives = 189/217 (87.10%), Query Frame = 1


Query: 2   MEFSNSAPSLWREALSSYPSKIEALGKPNLVSLDDFYRNELPLLLHERNPSPYITTSELS 61
           MEF  S  SLWREALSSY S+I++L KPNLVSLDDFYR +LP LLH+RNPSP+ITTSELS
Sbjct: 1   MEFECSTLSLWREALSSYSSRIQSLNKPNLVSLDDFYRTKLPSLLHQRNPSPFITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
            LM+WKLTRGKWRPRLLDFVS+LDE++VK ASQKAFQ LPDISKA+SELT LKGVGPATA
Sbjct: 61  DLMRWKLTRGKWRPRLLDFVSALDEAVVKSASQKAFQALPDISKAISELTVLKGVGPATA 120

Query: 122 SAVLAAYAPDIAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQNFTPSD 181
           SAVLAAYAPD+APFMSDEAM AALGNSKDY+LKQYL FA KLQ+KAKEL++EG++FTPSD
Sbjct: 121 SAVLAAYAPDVAPFMSDEAMVAALGNSKDYTLKQYLLFANKLQEKAKELTAEGESFTPSD 180

Query: 182 VERALWSIAIGEKFKGSQSELEPKKE-GKTGTKRKRK 218
           VERALWS A+G K   SQS+ + K +  K   KRKRK
Sbjct: 181 VERALWSGAVGAKLPSSQSDPDLKTDKSKNPNKRKRK 217

[Close]

BLAST of Cla020904 vs. NCBI nr
Match: gi|659103683|ref|XP_008452685.1| (PREDICTED: uncharacterized protein LOC103493629 isoform X2 [Cucumis melo])

HSP 1 Score: 327.8 bits (839), Expect = 1.5e-86
Identity = 170/219 (77.63%), Postives = 180/219 (82.19%), Query Frame = 1


Query: 2   MEFSNSAPSLWREALSSYPSKIEALGKPNLVSLDDFYRNELPLLLHERNPSPYITTSELS 61
           M+FSNS P+LWREALSSY S+IEALGKPNLVSLDDFYRNELPL+LH+R PSPYITTSELS
Sbjct: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60

Query: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 122 SAVLAAYAPDIAPFMSDEAMEAALGNSKDYSLKQYLSFAKKLQDKAKELSSEGQNFTPSD 181
           SA+LAAYAPD+APFMSDE                             ELS EG+ FTPSD
Sbjct: 121 SAILAAYAPDVAPFMSDE-----------------------------ELSLEGETFTPSD 180

Query: 182 VERALWSIAIGEKFKGSQSELEPKKEGKTGTKRKRKTSK 221
           VERALWS AIGEK KGSQS+L+P   GKTGTKRKRKTSK
Sbjct: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 190

The following BLAST results are available for this feature:

BLAST of Cla020904 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3W6_CUCSA	3.7e-105	89.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G645280 PE=4 SV=1	[more]
M5XSQ2_PRUPE	7.1e-88	77.42	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011235mg PE=4 SV=1	[more]
A0A061FEA1_THECC	2.5e-85	75.70	Gb:AAF48080.1 OS=Theobroma cacao GN=TCM_034642 PE=4 SV=1	[more]
M5W816_PRUPE	2.8e-84	77.67	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022189mg PE=4 S...	[more]
F6H169_VITVI	2.0e-82	74.54	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g08560 PE=4 SV=...	[more]

BLAST of Cla020904 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659103680\|ref\|XP_008452684.1\|	6.3e-106	89.50	PREDICTED: uncharacterized protein LOC103493629 isoform X1 [Cucumis melo]	[more]
gi\|449447089\|ref\|XP_004141302.1\|	5.4e-105	89.09	PREDICTED: uncharacterized protein LOC101204707 isoform X1 [Cucumis sativus]	[more]
gi\|596187364\|ref\|XP_007223399.1\|	1.0e-87	77.42	hypothetical protein PRUPE_ppa011235mg [Prunus persica]	[more]
gi\|645227220\|ref\|XP_008220412.1\|	1.5e-86	76.96	PREDICTED: uncharacterized protein LOC103320504 [Prunus mume]	[more]
gi\|659103683\|ref\|XP_008452685.1\|	1.5e-86	77.63	PREDICTED: uncharacterized protein LOC103493629 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU54420	watermelon EST collection version 2.0	transcribed_cluster
WMU61128	watermelon EST collection version 2.0	transcribed_cluster
WMU68502	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla020904	Cla020904.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU61128	WMU61128	transcribed_cluster
WMU68502	WMU68502	transcribed_cluster
WMU54420	WMU54420	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 153..173 scor
None	No IPR available	PANTHER	PTHR21521	UNCHARACTERIZED	coord: 1..195 score: 9.2
None	No IPR available	PANTHER	PTHR21521:SF0	AMUN, ISOFORM A	coord: 1..195 score: 9.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla020904	Cla97C05G098850	Watermelon (97103) v2	wmwmbB207
Cla020904	Csa4G645280	Cucumber (Chinese Long) v2	cuwmB321
Cla020904	MELO3C016844	Melon (DHL92) v3.5.1	mewmB529
Cla020904	ClCG05G017610	Watermelon (Charleston Gray)	wcgwmB285
Cla020904	CSPI04G25060	Wild cucumber (PI 183967)	cpiwmB326
Cla020904	Cucsa.353090	Cucumber (Gy14) v1	cgywmB632
Cla020904	CmaCh09G003140	Cucurbita maxima (Rimu)	cmawmB028
Cla020904	CmoCh09G003140	Cucurbita moschata (Rifu)	cmowmB020
Cla020904	Lsi04G014520	Bottle gourd (USVL1VR-Ls)	lsiwmB317
Cla020904	Cp4.1LG06g02150	Cucurbita pepo (Zucchini)	cpewmB767
Cla020904	CsGy4G023360	Cucumber (Gy14) v2	cgybwmB297
Cla020904	MELO3C016844.2	Melon (DHL92) v3.6.1	medwmB514
Cla020904	Carg21755	Silver-seed gourd	carwmB0312
Cla020904	CsaV3_4G035340	Cucumber (Chinese Long) v3	cucwmB334
Cla020904	Bhi09G002617	Wax gourd	wgowmB625

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None