MELO3C016844 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C016844
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionDNA-binding protein
Locationchr7 : 1686726 .. 1688463 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTTTCAAACTCCGATCCAACTCTCTGGAGAGAAGCTCTTTCTTCTTATTCATCTCAAATCGAAGCTCTAGGCAAGCCCAATTTGGTTTCTCTCGATGATTTTTACCGAAACGAACTACCTCTTATTCTCCACAAGCGAAAACCTAGCCCGTACATCACTACTTCTGAGCTCTCAAAACTCATGCAATGGAAGCTCACTAGAGGAAAATGGAGGTGCTCGGTGCTCTGCATCTCTCTCTTTTCATTTAGGTTTCGATGATTACTTATCAATTTTATCTACAACGATTTTACGAATTTCAGGCCTCGTCTCTTGGATTTCGTTTCATCATTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTCTCTGAACTTACGCCGCTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCAATTCTTGCTGCCTACGCCCCGGATGTTGCGCCTTTCATGTCCGACGAGGTGAAATCATGATGTATATTTATGCAATTACATTATCCGTAGCCATTGACTTCTTCAATAAGTTTTGAATATTTGTTATGCCTAGATTTCTAACTTATAGTGTTGAAGAATTAGGCTATGGAGGCGGCTCTAGGCAACTCCAAGGATTATTCATTGAAGCAATACTTATTATTCGCAAATAAATTGCAAGAGAAAGCCAAGGTCTGTCAGCTTTTTCCGTTTTCATCTTTTCAACCTTCATGCACCAATGTCTTTCTTGACTTTCTGACGAGCTTAGCTCTGCAAGTATCTGTTTCTCAAAGCCATGATACGAGTTTAGCATTCTAAATTGAACTGTTGTTTCAAACTTTGGGTGTATAGTATGCAAACATATGTTATATAAATATAGACTTCTGTGACATGTGCTTCATTTGTGAATGTACAATATGTAAAGATCTGCATTTAGTACATTTTCTCGATTTATATACATGGGTTTGTGTATTTTGTGAGATTAACAACCTTGGAACGTGGAATAAATGAAGGCACGAGTTAAACATTAGCTTGATTTCTGCATCTTAGACTATAAGCTCAACTTAAAGTCAAACATTCTAATTGTTCGAGGAAGTGGTTACAAAGTTTTTCTGTTTGTTGGACTGTTTTGAAACTGTTCCGACGATCCGAAAGACAAAGTAAGTGTCTCACTATTTAAAGTCTCTATTATAACTAACATATTTACAGTGAATCACATAAATCTGTTTGTTGATTCACTGTTGTTTTACATTTTTTTTAATTATTTCTTAACACTGTTCTTTATGGGAGATGGTCATTTGCAGGAATTAAGCTTAGAAGGAGAAACTTTCACACCATCTGATGTAGAGAGGGCTTTATGGAGTAGAGCTATAGGGGAAAAATTGAAAGGTTCACAATCACAATTAGATCCTAACAATGGAGGCAAAACTGGAACCAAAAGAAAGAGAAAAACTTCCAAGTGACAGCCCCTACCATTGCTTTTGAGTTTTGTACTTGTGGTTTTGGACATGCAGCTGATGTTGGCCTTTCAGGTTTACTCATTACTGCAACAATCTAACTTATATTCCTTAACTTACAATGTGAAATTGTAAATACTGCCTTGACGATCATGTTTGATGGCATCCTTCAATAGGTTTATGTCCTTTTTATTGTTATTTTTTAGAACACTTCCCTACTTTGAAAATATTTTACAAACAATTTTGTAATTTCAGCATAATTTGGGGTTTTT

mRNA sequence

ATGAAGTTTTCAAACTCCGATCCAACTCTCTGGAGAGAAGCTCTTTCTTCTTATTCATCTCAAATCGAAGCTCTAGGCAAGCCCAATTTGGTTTCTCTCGATGATTTTTACCGAAACGAACTACCTCTTATTCTCCACAAGCGAAAACCTAGCCCGTACATCACTACTTCTGAGCTCTCAAAACTCATGCAATGGAAGCTCACTAGAGGAAAATGGAGGCCTCGTCTCTTGGATTTCGTTTCATCATTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTCTCTGAACTTACGCCGCTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCAATTCTTGCTGCCTACGCCCCGGATGTTGCGCCTTTCATGTCCGACGAGGCTATGGAGGCGGCTCTAGGCAACTCCAAGGATTATTCATTGAAGCAATACTTATTATTCGCAAATAAATTGCAAGAGAAAGCCAAGGAATTAAGCTTAGAAGGAGAAACTTTCACACCATCTGATGTAGAGAGGGCTTTATGGAGTAGAGCTATAGGGGAAAAATTGAAAGGTTCACAATCACAATTAGATCCTAACAATGGAGGCAAAACTGGAACCAAAAGAAAGAGAAAAACTTCCAAGTGACAGCCCCTACCATTGCTTTTGAGTTTTGTACTTGTGGTTTTGGACATGCAGCTGATGTTGGCCTTTCAGGTTTACTCATTACTGCAACAATCTAACTTATATTCCTTAACTTACAATGTGAAATTGTAAATACTGCCTTGACGATCATGTTTGATGGCATCCTTCAATAGGTTTATGTCCTTTTTATTGTTATTTTTTAGAACACTTCCCTACTTTGAAAATATTTTACAAACAATTTTGTAATTTCAGCATAATTTGGGGTTTTT

Coding sequence (CDS)

ATGAAGTTTTCAAACTCCGATCCAACTCTCTGGAGAGAAGCTCTTTCTTCTTATTCATCTCAAATCGAAGCTCTAGGCAAGCCCAATTTGGTTTCTCTCGATGATTTTTACCGAAACGAACTACCTCTTATTCTCCACAAGCGAAAACCTAGCCCGTACATCACTACTTCTGAGCTCTCAAAACTCATGCAATGGAAGCTCACTAGAGGAAAATGGAGGCCTCGTCTCTTGGATTTCGTTTCATCATTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTCTCTGAACTTACGCCGCTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCAATTCTTGCTGCCTACGCCCCGGATGTTGCGCCTTTCATGTCCGACGAGGCTATGGAGGCGGCTCTAGGCAACTCCAAGGATTATTCATTGAAGCAATACTTATTATTCGCAAATAAATTGCAAGAGAAAGCCAAGGAATTAAGCTTAGAAGGAGAAACTTTCACACCATCTGATGTAGAGAGGGCTTTATGGAGTAGAGCTATAGGGGAAAAATTGAAAGGTTCACAATCACAATTAGATCCTAACAATGGAGGCAAAACTGGAACCAAAAGAAAGAGAAAAACTTCCAAGTGA

Protein sequence

MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATASAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSDVERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK*
Homology
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BLAST of MELO3C016844 vs. TrEMBL
Match: A0A0A0L3W6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G645280 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 5.7e-114
Identity = 210/219 (95.89%), Postives = 216/219 (98.63%), Query Frame = 1 

Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           M+FS SDPTLWREALS+YSSQIEALGKPNLVSLDDFYRNELPLILHKR PSPYITTSELS
Sbjct: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKL++KAKELSLEGE FTPSD
Sbjct: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPSD 181

Query: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 220
           VERALWSRAIGEKLKGS+SQLDPNNGGKTGTKRKRKTSK
Sbjct: 182 VERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK 220

[Close]
BLAST of MELO3C016844 vs. TrEMBL
Match: M5XSQ2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011235mg PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.4e-88
Identity = 170/217 (78.34%), Postives = 189/217 (87.10%), Query Frame = 1 

Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           M+F  S P+LWREALSSYSS+I++L KPNLVSLDDFYRN LP +LH+R PSP+ITTSELS
Sbjct: 1   MEFECSAPSLWREALSSYSSRIQSLNKPNLVSLDDFYRNALPSLLHQRNPSPFITTSELS 60

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
            LM+WKLTRGKWRPRLLDFVS+LDE++VK ASQKAFQ LPDISKA+SELT LKG+GPATA
Sbjct: 61  DLMRWKLTRGKWRPRLLDFVSALDEAVVKSASQKAFQALPDISKAISELTVLKGLGPATA 120

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAPDVAPFMSDEAM AALGNSKDY+LKQYLLF NKLQEKAKEL+ EGETFTPSD
Sbjct: 121 SAVLAAYAPDVAPFMSDEAMVAALGNSKDYTLKQYLLFVNKLQEKAKELTAEGETFTPSD 180

Query: 181 VERALWSRAIGEKLKGSQSQLD-PNNGGKTGTKRKRK 217
           VERALWS A+G KL  SQS  D   +  K   KRKRK
Sbjct: 181 VERALWSGAVGAKLPSSQSDPDLKTDKSKNPNKRKRK 217

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BLAST of MELO3C016844 vs. TrEMBL
Match: A0A061FEA1_THECC (Gb:AAF48080.1 OS=Theobroma cacao GN=TCM_034642 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.1e-85
Identity = 163/216 (75.46%), Postives = 190/216 (87.96%), Query Frame = 1 

Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           + F  +D ++W+EA+SSY S+IE+L KPNLVSLD+FYRNELP +LH+R P+P+ITTSELS
Sbjct: 3   LHFECTDLSIWKEAISSYKSRIESLDKPNLVSLDEFYRNELPPLLHQRNPNPFITTSELS 62

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
           +LMQWKLTRGKWRPRLLDFVSSLD+SLVK ASQKAFQ LPDISKAVSELT LKGVGPATA
Sbjct: 63  RLMQWKLTRGKWRPRLLDFVSSLDDSLVKSASQKAFQSLPDISKAVSELTVLKGVGPATA 122

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAP+ APFMSDEAMEAALGNSKDYSLKQYLLF +K+Q K+KELS +G++FTPSD
Sbjct: 123 SAVLAAYAPETAPFMSDEAMEAALGNSKDYSLKQYLLFVDKIQSKSKELSSKGDSFTPSD 182

Query: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRK 217
           VERALWS A+G KL+ SQ+ LD  N  K   KRKR+
Sbjct: 183 VERALWSSAVGIKLQSSQAVLD--NKMKGSNKRKRR 216

[Close]
BLAST of MELO3C016844 vs. TrEMBL
Match: M5W816_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022189mg PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.3e-85
Identity = 162/202 (80.20%), Postives = 180/202 (89.11%), Query Frame = 1 

Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           M+F  S P+LWREALSSYSS+I++L KPNLVSLDDFYRN LP +LH+  PSP+ITTSELS
Sbjct: 1   MEFECSAPSLWREALSSYSSRIQSLNKPNLVSLDDFYRNALPSLLHQGNPSPFITTSELS 60

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
            LM+WKLTRGKWRPRLLDFVS+LDE++VK ASQKAFQ LPDISKA+SELT LKG+GPATA
Sbjct: 61  DLMRWKLTRGKWRPRLLDFVSALDEAVVKSASQKAFQALPDISKAISELTVLKGLGPATA 120

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAPDVAPFMSDEAM AALGNSKDY+LKQYLLF NKLQEKAKEL+ E ETFTPSD
Sbjct: 121 SAVLAAYAPDVAPFMSDEAMVAALGNSKDYTLKQYLLFVNKLQEKAKELTAEWETFTPSD 180

Query: 181 VERALWSRAIGEKLKGSQSQLD 203
           VERALWS A+G KL  SQS  D
Sbjct: 181 VERALWSGAVGAKLPSSQSDPD 202

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BLAST of MELO3C016844 vs. TrEMBL
Match: F6H169_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g08560 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.4e-83
Identity = 161/216 (74.54%), Postives = 186/216 (86.11%), Query Frame = 1 

Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           M F   + ++W+EALSSYS++I +L KP LVSLDDFY N+LP ++ +R P+PYITTSELS
Sbjct: 1   MDFQCLNRSVWKEALSSYSARIVSLNKPQLVSLDDFYCNQLPALIRQRNPNPYITTSELS 60

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
           KLMQWKLTRGKWRPRLLDFVSSLDE+LVK ASQKAFQ LPDISKA+SELT LKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDEALVKSASQKAFQSLPDISKAISELTVLKGVGPATA 120

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAPDVAPFMSDEAM AALGNSKDY+LKQYL+FA+KLQ KA+ELS+EG+++TPSD
Sbjct: 121 SALLAAYAPDVAPFMSDEAMVAALGNSKDYTLKQYLVFADKLQNKARELSVEGDSYTPSD 180

Query: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRK 217
           VERALWS A+G KL  S     PN+  K  TKRKRK
Sbjct: 181 VERALWSSAVGTKLLDSL----PNSEPKVNTKRKRK 212

[Close]
BLAST of MELO3C016844 vs. TAIR10
Match: AT3G12210.2 (AT3G12210.2 DNA binding)

HSP 1 Score: 291.2 bits (744), Expect = 5.4e-79
Identity = 151/215 (70.23%), Postives = 175/215 (81.40%), Query Frame = 1 

Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           ++F  SD  +W+EALSSY S+IE+L KP LVSLD FYR +LP +LH R P+PY+TTSELS
Sbjct: 3   LEFKCSDVGVWKEALSSYDSRIESLNKPELVSLDQFYRIKLPCLLHDRDPNPYLTTSELS 62

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
           +LM+WKL+RGKWRPRLLDFVSSLD+S+VK AS+KAF+ LPDISKAV ELT LKGVG ATA
Sbjct: 63  QLMKWKLSRGKWRPRLLDFVSSLDDSVVKSASEKAFKSLPDISKAVKELTVLKGVGAATA 122

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAPD+APFMSDEAME ALGNSKDYSLKQYLLFA KLQ+KAKEL L+GE   PSD
Sbjct: 123 SAVLAAYAPDIAPFMSDEAMEVALGNSKDYSLKQYLLFATKLQDKAKELKLKGEWDGPSD 182

Query: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKR 216
           +ERALWS  +  K     SQ + ++ GK   KRKR
Sbjct: 183 IERALWSCTVRAK-----SQPEKSSSGK---KRKR 209

[Close]
BLAST of MELO3C016844 vs. NCBI nr
Match: gi|659103680|ref|XP_008452684.1| (PREDICTED: uncharacterized protein LOC103493629 isoform X1 [Cucumis melo])

HSP 1 Score: 433.0 bits (1112), Expect = 3.2e-118
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 1 

Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS
Sbjct: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD
Sbjct: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180

Query: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 220
           VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK
Sbjct: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 219

[Close]
BLAST of MELO3C016844 vs. NCBI nr
Match: gi|449447089|ref|XP_004141302.1| (PREDICTED: uncharacterized protein LOC101204707 isoform X1 [Cucumis sativus])

HSP 1 Score: 418.3 bits (1074), Expect = 8.2e-114
Identity = 210/219 (95.89%), Postives = 216/219 (98.63%), Query Frame = 1 

Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           M+FS SDPTLWREALS+YSSQIEALGKPNLVSLDDFYRNELPLILHKR PSPYITTSELS
Sbjct: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKL++KAKELSLEGE FTPSD
Sbjct: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPSD 181

Query: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 220
           VERALWSRAIGEKLKGS+SQLDPNNGGKTGTKRKRKTSK
Sbjct: 182 VERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK 220

[Close]
BLAST of MELO3C016844 vs. NCBI nr
Match: gi|659103683|ref|XP_008452685.1| (PREDICTED: uncharacterized protein LOC103493629 isoform X2 [Cucumis melo])

HSP 1 Score: 362.8 bits (930), Expect = 4.1e-97
Identity = 190/219 (86.76%), Postives = 190/219 (86.76%), Query Frame = 1 

Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS
Sbjct: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SAILAAYAPDVAPFMSDE                             ELSLEGETFTPSD
Sbjct: 121 SAILAAYAPDVAPFMSDE-----------------------------ELSLEGETFTPSD 180

Query: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 220
           VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK
Sbjct: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 190

[Close]
BLAST of MELO3C016844 vs. NCBI nr
Match: gi|778696518|ref|XP_011654161.1| (PREDICTED: uncharacterized protein LOC101204707 isoform X2 [Cucumis sativus])

HSP 1 Score: 350.5 bits (898), Expect = 2.1e-93
Identity = 183/219 (83.56%), Postives = 187/219 (85.39%), Query Frame = 1 

Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           M+FS SDPTLWREALS+YSSQIEALGKPNLVSLDDFYRNELPLILHKR PSPYITTSELS
Sbjct: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAPDVAPFMSDE                             ELSLEGE FTPSD
Sbjct: 122 SAVLAAYAPDVAPFMSDE-----------------------------ELSLEGEIFTPSD 181

Query: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 220
           VERALWSRAIGEKLKGS+SQLDPNNGGKTGTKRKRKTSK
Sbjct: 182 VERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK 191

[Close]
BLAST of MELO3C016844 vs. NCBI nr
Match: gi|596187364|ref|XP_007223399.1| (hypothetical protein PRUPE_ppa011235mg [Prunus persica])

HSP 1 Score: 334.0 bits (855), Expect = 2.0e-88
Identity = 170/217 (78.34%), Postives = 189/217 (87.10%), Query Frame = 1 

Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           M+F  S P+LWREALSSYSS+I++L KPNLVSLDDFYRN LP +LH+R PSP+ITTSELS
Sbjct: 1   MEFECSAPSLWREALSSYSSRIQSLNKPNLVSLDDFYRNALPSLLHQRNPSPFITTSELS 60

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
            LM+WKLTRGKWRPRLLDFVS+LDE++VK ASQKAFQ LPDISKA+SELT LKG+GPATA
Sbjct: 61  DLMRWKLTRGKWRPRLLDFVSALDEAVVKSASQKAFQALPDISKAISELTVLKGLGPATA 120

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAPDVAPFMSDEAM AALGNSKDY+LKQYLLF NKLQEKAKEL+ EGETFTPSD
Sbjct: 121 SAVLAAYAPDVAPFMSDEAMVAALGNSKDYTLKQYLLFVNKLQEKAKELTAEGETFTPSD 180

Query: 181 VERALWSRAIGEKLKGSQSQLD-PNNGGKTGTKRKRK 217
           VERALWS A+G KL  SQS  D   +  K   KRKRK
Sbjct: 181 VERALWSGAVGAKLPSSQSDPDLKTDKSKNPNKRKRK 217

The following BLAST results are available for this feature:
BLAST of MELO3C016844 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3W6_CUCSA5.7e-11495.89Uncharacterized protein OS=Cucumis sativus GN=Csa_4G645280 PE=4 SV=1[more]
M5XSQ2_PRUPE1.4e-8878.34Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011235mg PE=4 SV=1[more]
A0A061FEA1_THECC1.1e-8575.46Gb:AAF48080.1 OS=Theobroma cacao GN=TCM_034642 PE=4 SV=1[more]
M5W816_PRUPE3.3e-8580.20Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022189mg PE=4 S... [more]
F6H169_VITVI2.4e-8374.54Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g08560 PE=4 SV=... [more]
BLAST of MELO3C016844 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12210.25.4e-7970.23 DNA binding[more]
BLAST of MELO3C016844 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659103680|ref|XP_008452684.1|3.2e-118100.00PREDICTED: uncharacterized protein LOC103493629 isoform X1 [Cucumis melo][more]
gi|449447089|ref|XP_004141302.1|8.2e-11495.89PREDICTED: uncharacterized protein LOC101204707 isoform X1 [Cucumis sativus][more]
gi|659103683|ref|XP_008452685.1|4.1e-9786.76PREDICTED: uncharacterized protein LOC103493629 isoform X2 [Cucumis melo][more]
gi|778696518|ref|XP_011654161.1|2.1e-9383.56PREDICTED: uncharacterized protein LOC101204707 isoform X2 [Cucumis sativus][more]
gi|596187364|ref|XP_007223399.1|2.0e-8878.34hypothetical protein PRUPE_ppa011235mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU56778melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016844T1MELO3C016844T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU56778MU56778transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21521UNCHARACTERIZEDcoord: 3..194
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C016844Csa4G645280Cucumber (Chinese Long) v2cumeB313
MELO3C016844Cla020904Watermelon (97103) v1mewmB529
MELO3C016844ClCG05G017610Watermelon (Charleston Gray)mewcgB481
MELO3C016844Cla97C05G098850Watermelon (97103) v2mewmbB486
MELO3C016844Bhi09G002617Wax gourdmewgoB595
MELO3C016844CSPI04G25060Wild cucumber (PI 183967)cpimeB311
MELO3C016844Cucsa.353090Cucumber (Gy14) v1cgymeB570
MELO3C016844CmaCh09G003140Cucurbita maxima (Rimu)cmameB040
MELO3C016844CmoCh09G003140Cucurbita moschata (Rifu)cmomeB029
MELO3C016844Lsi04G014520Bottle gourd (USVL1VR-Ls)lsimeB314
MELO3C016844Cp4.1LG06g02150Cucurbita pepo (Zucchini)cpemeB734
MELO3C016844CsGy4G023360Cucumber (Gy14) v2cgybmeB270
MELO3C016844Carg21755Silver-seed gourdcarmeB0325
MELO3C016844CsaV3_4G035340Cucumber (Chinese Long) v3cucmeB316
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C016844Watermelon (97103) v2mewmbB506
MELO3C016844Wax gourdmewgoB588
MELO3C016844Melon (DHL92) v3.5.1memeB098
MELO3C016844Melon (DHL92) v3.5.1memeB128
MELO3C016844Cucumber (Gy14) v1cgymeB382
MELO3C016844Cucumber (Gy14) v1cgymeB647
MELO3C016844Cucurbita maxima (Rimu)cmameB182
MELO3C016844Cucurbita maxima (Rimu)cmameB432
MELO3C016844Cucurbita maxima (Rimu)cmameB447
MELO3C016844Cucurbita maxima (Rimu)cmameB741
MELO3C016844Cucurbita maxima (Rimu)cmameB795
MELO3C016844Cucurbita moschata (Rifu)cmomeB171
MELO3C016844Cucurbita moschata (Rifu)cmomeB422
MELO3C016844Cucurbita moschata (Rifu)cmomeB729
MELO3C016844Wild cucumber (PI 183967)cpimeB148
MELO3C016844Wild cucumber (PI 183967)cpimeB569
MELO3C016844Cucumber (Chinese Long) v2cumeB149
MELO3C016844Cucumber (Chinese Long) v2cumeB558
MELO3C016844Watermelon (Charleston Gray)mewcgB502
MELO3C016844Watermelon (97103) v1mewmB501
MELO3C016844Cucurbita pepo (Zucchini)cpemeB107
MELO3C016844Cucurbita pepo (Zucchini)cpemeB538
MELO3C016844Cucurbita pepo (Zucchini)cpemeB784
MELO3C016844Bottle gourd (USVL1VR-Ls)lsimeB488
MELO3C016844Cucumber (Gy14) v2cgybmeB128
MELO3C016844Cucumber (Gy14) v2cgybmeB498
MELO3C016844Silver-seed gourdcarmeB0187
MELO3C016844Silver-seed gourdcarmeB0411
MELO3C016844Silver-seed gourdcarmeB0462
MELO3C016844Silver-seed gourdcarmeB0767
MELO3C016844Cucumber (Chinese Long) v3cucmeB150
MELO3C016844Cucumber (Chinese Long) v3cucmeB516
MELO3C016844Cucumber (Chinese Long) v3cucmeB581