MELO3C016844T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C016844T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	DNA-binding protein
Location	chr7 : 1686726 .. 1688463 (+)
Sequence length	926

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTTTCAAACTCCGATCCAACTCTCTGGAGAGAAGCTCTTTCTTCTTATTCATCTCAAATCGAAGCTCTAGGCAAGCCCAATTTGGTTTCTCTCGATGATTTTTACCGAAACGAACTACCTCTTATTCTCCACAAGCGAAAACCTAGCCCGTACATCACTACTTCTGAGCTCTCAAAACTCATGCAATGGAAGCTCACTAGAGGAAAATGGAGGTGCTCGGTGCTCTGCATCTCTCTCTTTTCATTTAGGTTTCGATGATTACTTATCAATTTTATCTACAACGATTTTACGAATTTCAGGCCTCGTCTCTTGGATTTCGTTTCATCATTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTCTCTGAACTTACGCCGCTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCAATTCTTGCTGCCTACGCCCCGGATGTTGCGCCTTTCATGTCCGACGAGGTGAAATCATGATGTATATTTATGCAATTACATTATCCGTAGCCATTGACTTCTTCAATAAGTTTTGAATATTTGTTATGCCTAGATTTCTAACTTATAGTGTTGAAGAATTAGGCTATGGAGGCGGCTCTAGGCAACTCCAAGGATTATTCATTGAAGCAATACTTATTATTCGCAAATAAATTGCAAGAGAAAGCCAAGGTCTGTCAGCTTTTTCCGTTTTCATCTTTTCAACCTTCATGCACCAATGTCTTTCTTGACTTTCTGACGAGCTTAGCTCTGCAAGTATCTGTTTCTCAAAGCCATGATACGAGTTTAGCATTCTAAATTGAACTGTTGTTTCAAACTTTGGGTGTATAGTATGCAAACATATGTTATATAAATATAGACTTCTGTGACATGTGCTTCATTTGTGAATGTACAATATGTAAAGATCTGCATTTAGTACATTTTCTCGATTTATATACATGGGTTTGTGTATTTTGTGAGATTAACAACCTTGGAACGTGGAATAAATGAAGGCACGAGTTAAACATTAGCTTGATTTCTGCATCTTAGACTATAAGCTCAACTTAAAGTCAAACATTCTAATTGTTCGAGGAAGTGGTTACAAAGTTTTTCTGTTTGTTGGACTGTTTTGAAACTGTTCCGACGATCCGAAAGACAAAGTAAGTGTCTCACTATTTAAAGTCTCTATTATAACTAACATATTTACAGTGAATCACATAAATCTGTTTGTTGATTCACTGTTGTTTTACATTTTTTTTAATTATTTCTTAACACTGTTCTTTATGGGAGATGGTCATTTGCAGGAATTAAGCTTAGAAGGAGAAACTTTCACACCATCTGATGTAGAGAGGGCTTTATGGAGTAGAGCTATAGGGGAAAAATTGAAAGGTTCACAATCACAATTAGATCCTAACAATGGAGGCAAAACTGGAACCAAAAGAAAGAGAAAAACTTCCAAGTGACAGCCCCTACCATTGCTTTTGAGTTTTGTACTTGTGGTTTTGGACATGCAGCTGATGTTGGCCTTTCAGGTTTACTCATTACTGCAACAATCTAACTTATATTCCTTAACTTACAATGTGAAATTGTAAATACTGCCTTGACGATCATGTTTGATGGCATCCTTCAATAGGTTTATGTCCTTTTTATTGTTATTTTTTAGAACACTTCCCTACTTTGAAAATATTTTACAAACAATTTTGTAATTTCAGCATAATTTGGGGTTTTT

mRNA sequence

ATGAAGTTTTCAAACTCCGATCCAACTCTCTGGAGAGAAGCTCTTTCTTCTTATTCATCTCAAATCGAAGCTCTAGGCAAGCCCAATTTGGTTTCTCTCGATGATTTTTACCGAAACGAACTACCTCTTATTCTCCACAAGCGAAAACCTAGCCCGTACATCACTACTTCTGAGCTCTCAAAACTCATGCAATGGAAGCTCACTAGAGGAAAATGGAGGCCTCGTCTCTTGGATTTCGTTTCATCATTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTCTCTGAACTTACGCCGCTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCAATTCTTGCTGCCTACGCCCCGGATGTTGCGCCTTTCATGTCCGACGAGGCTATGGAGGCGGCTCTAGGCAACTCCAAGGATTATTCATTGAAGCAATACTTATTATTCGCAAATAAATTGCAAGAGAAAGCCAAGGAATTAAGCTTAGAAGGAGAAACTTTCACACCATCTGATGTAGAGAGGGCTTTATGGAGTAGAGCTATAGGGGAAAAATTGAAAGGTTCACAATCACAATTAGATCCTAACAATGGAGGCAAAACTGGAACCAAAAGAAAGAGAAAAACTTCCAAGTGACAGCCCCTACCATTGCTTTTGAGTTTTGTACTTGTGGTTTTGGACATGCAGCTGATGTTGGCCTTTCAGGTTTACTCATTACTGCAACAATCTAACTTATATTCCTTAACTTACAATGTGAAATTGTAAATACTGCCTTGACGATCATGTTTGATGGCATCCTTCAATAGGTTTATGTCCTTTTTATTGTTATTTTTTAGAACACTTCCCTACTTTGAAAATATTTTACAAACAATTTTGTAATTTCAGCATAATTTGGGGTTTTT

Coding sequence (CDS)

ATGAAGTTTTCAAACTCCGATCCAACTCTCTGGAGAGAAGCTCTTTCTTCTTATTCATCTCAAATCGAAGCTCTAGGCAAGCCCAATTTGGTTTCTCTCGATGATTTTTACCGAAACGAACTACCTCTTATTCTCCACAAGCGAAAACCTAGCCCGTACATCACTACTTCTGAGCTCTCAAAACTCATGCAATGGAAGCTCACTAGAGGAAAATGGAGGCCTCGTCTCTTGGATTTCGTTTCATCATTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTCTCTGAACTTACGCCGCTCAAAGGCGTTGGTCCGGCCACTGCCTCGGCAATTCTTGCTGCCTACGCCCCGGATGTTGCGCCTTTCATGTCCGACGAGGCTATGGAGGCGGCTCTAGGCAACTCCAAGGATTATTCATTGAAGCAATACTTATTATTCGCAAATAAATTGCAAGAGAAAGCCAAGGAATTAAGCTTAGAAGGAGAAACTTTCACACCATCTGATGTAGAGAGGGCTTTATGGAGTAGAGCTATAGGGGAAAAATTGAAAGGTTCACAATCACAATTAGATCCTAACAATGGAGGCAAAACTGGAACCAAAAGAAAGAGAAAAACTTCCAAGTGA

Protein sequence

MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATASAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSDVERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK*

Homology

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BLAST of MELO3C016844T1 vs. TrEMBL
Match: A0A0A0L3W6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G645280 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 5.7e-114
Identity = 210/219 (95.89%), Postives = 216/219 (98.63%), Query Frame = 1


Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           M+FS SDPTLWREALS+YSSQIEALGKPNLVSLDDFYRNELPLILHKR PSPYITTSELS
Sbjct: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKL++KAKELSLEGE FTPSD
Sbjct: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPSD 181

Query: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 220
           VERALWSRAIGEKLKGS+SQLDPNNGGKTGTKRKRKTSK
Sbjct: 182 VERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK 220

[Close]

BLAST of MELO3C016844T1 vs. TrEMBL
Match: M5XSQ2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011235mg PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.4e-88
Identity = 170/217 (78.34%), Postives = 189/217 (87.10%), Query Frame = 1


Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           M+F  S P+LWREALSSYSS+I++L KPNLVSLDDFYRN LP +LH+R PSP+ITTSELS
Sbjct: 1   MEFECSAPSLWREALSSYSSRIQSLNKPNLVSLDDFYRNALPSLLHQRNPSPFITTSELS 60

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
            LM+WKLTRGKWRPRLLDFVS+LDE++VK ASQKAFQ LPDISKA+SELT LKG+GPATA
Sbjct: 61  DLMRWKLTRGKWRPRLLDFVSALDEAVVKSASQKAFQALPDISKAISELTVLKGLGPATA 120

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAPDVAPFMSDEAM AALGNSKDY+LKQYLLF NKLQEKAKEL+ EGETFTPSD
Sbjct: 121 SAVLAAYAPDVAPFMSDEAMVAALGNSKDYTLKQYLLFVNKLQEKAKELTAEGETFTPSD 180

Query: 181 VERALWSRAIGEKLKGSQSQLD-PNNGGKTGTKRKRK 217
           VERALWS A+G KL  SQS  D   +  K   KRKRK
Sbjct: 181 VERALWSGAVGAKLPSSQSDPDLKTDKSKNPNKRKRK 217

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BLAST of MELO3C016844T1 vs. TrEMBL
Match: A0A061FEA1_THECC (Gb:AAF48080.1 OS=Theobroma cacao GN=TCM_034642 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.1e-85
Identity = 163/216 (75.46%), Postives = 190/216 (87.96%), Query Frame = 1


Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           + F  +D ++W+EA+SSY S+IE+L KPNLVSLD+FYRNELP +LH+R P+P+ITTSELS
Sbjct: 3   LHFECTDLSIWKEAISSYKSRIESLDKPNLVSLDEFYRNELPPLLHQRNPNPFITTSELS 62

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
           +LMQWKLTRGKWRPRLLDFVSSLD+SLVK ASQKAFQ LPDISKAVSELT LKGVGPATA
Sbjct: 63  RLMQWKLTRGKWRPRLLDFVSSLDDSLVKSASQKAFQSLPDISKAVSELTVLKGVGPATA 122

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAP+ APFMSDEAMEAALGNSKDYSLKQYLLF +K+Q K+KELS +G++FTPSD
Sbjct: 123 SAVLAAYAPETAPFMSDEAMEAALGNSKDYSLKQYLLFVDKIQSKSKELSSKGDSFTPSD 182

Query: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRK 217
           VERALWS A+G KL+ SQ+ LD  N  K   KRKR+
Sbjct: 183 VERALWSSAVGIKLQSSQAVLD--NKMKGSNKRKRR 216

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BLAST of MELO3C016844T1 vs. TrEMBL
Match: M5W816_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022189mg PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.3e-85
Identity = 162/202 (80.20%), Postives = 180/202 (89.11%), Query Frame = 1


Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           M+F  S P+LWREALSSYSS+I++L KPNLVSLDDFYRN LP +LH+  PSP+ITTSELS
Sbjct: 1   MEFECSAPSLWREALSSYSSRIQSLNKPNLVSLDDFYRNALPSLLHQGNPSPFITTSELS 60

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
            LM+WKLTRGKWRPRLLDFVS+LDE++VK ASQKAFQ LPDISKA+SELT LKG+GPATA
Sbjct: 61  DLMRWKLTRGKWRPRLLDFVSALDEAVVKSASQKAFQALPDISKAISELTVLKGLGPATA 120

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAPDVAPFMSDEAM AALGNSKDY+LKQYLLF NKLQEKAKEL+ E ETFTPSD
Sbjct: 121 SAVLAAYAPDVAPFMSDEAMVAALGNSKDYTLKQYLLFVNKLQEKAKELTAEWETFTPSD 180

Query: 181 VERALWSRAIGEKLKGSQSQLD 203
           VERALWS A+G KL  SQS  D
Sbjct: 181 VERALWSGAVGAKLPSSQSDPD 202

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BLAST of MELO3C016844T1 vs. TrEMBL
Match: F6H169_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g08560 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.4e-83
Identity = 161/216 (74.54%), Postives = 186/216 (86.11%), Query Frame = 1


Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           M F   + ++W+EALSSYS++I +L KP LVSLDDFY N+LP ++ +R P+PYITTSELS
Sbjct: 1   MDFQCLNRSVWKEALSSYSARIVSLNKPQLVSLDDFYCNQLPALIRQRNPNPYITTSELS 60

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
           KLMQWKLTRGKWRPRLLDFVSSLDE+LVK ASQKAFQ LPDISKA+SELT LKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDEALVKSASQKAFQSLPDISKAISELTVLKGVGPATA 120

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAPDVAPFMSDEAM AALGNSKDY+LKQYL+FA+KLQ KA+ELS+EG+++TPSD
Sbjct: 121 SALLAAYAPDVAPFMSDEAMVAALGNSKDYTLKQYLVFADKLQNKARELSVEGDSYTPSD 180

Query: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRK 217
           VERALWS A+G KL  S     PN+  K  TKRKRK
Sbjct: 181 VERALWSSAVGTKLLDSL----PNSEPKVNTKRKRK 212

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BLAST of MELO3C016844T1 vs. TAIR10
Match: AT3G12210.2 (AT3G12210.2 DNA binding)

HSP 1 Score: 291.2 bits (744), Expect = 5.4e-79
Identity = 151/215 (70.23%), Postives = 175/215 (81.40%), Query Frame = 1


Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           ++F  SD  +W+EALSSY S+IE+L KP LVSLD FYR +LP +LH R P+PY+TTSELS
Sbjct: 3   LEFKCSDVGVWKEALSSYDSRIESLNKPELVSLDQFYRIKLPCLLHDRDPNPYLTTSELS 62

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
           +LM+WKL+RGKWRPRLLDFVSSLD+S+VK AS+KAF+ LPDISKAV ELT LKGVG ATA
Sbjct: 63  QLMKWKLSRGKWRPRLLDFVSSLDDSVVKSASEKAFKSLPDISKAVKELTVLKGVGAATA 122

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAPD+APFMSDEAME ALGNSKDYSLKQYLLFA KLQ+KAKEL L+GE   PSD
Sbjct: 123 SAVLAAYAPDIAPFMSDEAMEVALGNSKDYSLKQYLLFATKLQDKAKELKLKGEWDGPSD 182

Query: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKR 216
           +ERALWS  +  K     SQ + ++ GK   KRKR
Sbjct: 183 IERALWSCTVRAK-----SQPEKSSSGK---KRKR 209

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BLAST of MELO3C016844T1 vs. NCBI nr
Match: gi|659103680|ref|XP_008452684.1| (PREDICTED: uncharacterized protein LOC103493629 isoform X1 [Cucumis melo])

HSP 1 Score: 433.0 bits (1112), Expect = 3.2e-118
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 1


Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS
Sbjct: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD
Sbjct: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180

Query: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 220
           VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK
Sbjct: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 219

[Close]

BLAST of MELO3C016844T1 vs. NCBI nr
Match: gi|449447089|ref|XP_004141302.1| (PREDICTED: uncharacterized protein LOC101204707 isoform X1 [Cucumis sativus])

HSP 1 Score: 418.3 bits (1074), Expect = 8.2e-114
Identity = 210/219 (95.89%), Postives = 216/219 (98.63%), Query Frame = 1


Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           M+FS SDPTLWREALS+YSSQIEALGKPNLVSLDDFYRNELPLILHKR PSPYITTSELS
Sbjct: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKL++KAKELSLEGE FTPSD
Sbjct: 122 SAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLEQKAKELSLEGEIFTPSD 181

Query: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 220
           VERALWSRAIGEKLKGS+SQLDPNNGGKTGTKRKRKTSK
Sbjct: 182 VERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK 220

[Close]

BLAST of MELO3C016844T1 vs. NCBI nr
Match: gi|659103683|ref|XP_008452685.1| (PREDICTED: uncharacterized protein LOC103493629 isoform X2 [Cucumis melo])

HSP 1 Score: 362.8 bits (930), Expect = 4.1e-97
Identity = 190/219 (86.76%), Postives = 190/219 (86.76%), Query Frame = 1


Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS
Sbjct: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SAILAAYAPDVAPFMSDE                             ELSLEGETFTPSD
Sbjct: 121 SAILAAYAPDVAPFMSDE-----------------------------ELSLEGETFTPSD 180

Query: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 220
           VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK
Sbjct: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 190

[Close]

BLAST of MELO3C016844T1 vs. NCBI nr
Match: gi|778696518|ref|XP_011654161.1| (PREDICTED: uncharacterized protein LOC101204707 isoform X2 [Cucumis sativus])

HSP 1 Score: 350.5 bits (898), Expect = 2.1e-93
Identity = 183/219 (83.56%), Postives = 187/219 (85.39%), Query Frame = 1


Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           M+FS SDPTLWREALS+YSSQIEALGKPNLVSLDDFYRNELPLILHKR PSPYITTSELS
Sbjct: 2   MEFSISDPTLWREALSTYSSQIEALGKPNLVSLDDFYRNELPLILHKRNPSPYITTSELS 61

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
           KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA
Sbjct: 62  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 121

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAPDVAPFMSDE                             ELSLEGE FTPSD
Sbjct: 122 SAVLAAYAPDVAPFMSDE-----------------------------ELSLEGEIFTPSD 181

Query: 181 VERALWSRAIGEKLKGSQSQLDPNNGGKTGTKRKRKTSK 220
           VERALWSRAIGEKLKGS+SQLDPNNGGKTGTKRKRKTSK
Sbjct: 182 VERALWSRAIGEKLKGSKSQLDPNNGGKTGTKRKRKTSK 191

[Close]

BLAST of MELO3C016844T1 vs. NCBI nr
Match: gi|596187364|ref|XP_007223399.1| (hypothetical protein PRUPE_ppa011235mg [Prunus persica])

HSP 1 Score: 334.0 bits (855), Expect = 2.0e-88
Identity = 170/217 (78.34%), Postives = 189/217 (87.10%), Query Frame = 1


Query: 1   MKFSNSDPTLWREALSSYSSQIEALGKPNLVSLDDFYRNELPLILHKRKPSPYITTSELS 60
           M+F  S P+LWREALSSYSS+I++L KPNLVSLDDFYRN LP +LH+R PSP+ITTSELS
Sbjct: 1   MEFECSAPSLWREALSSYSSRIQSLNKPNLVSLDDFYRNALPSLLHQRNPSPFITTSELS 60

Query: 61  KLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSELTPLKGVGPATA 120
            LM+WKLTRGKWRPRLLDFVS+LDE++VK ASQKAFQ LPDISKA+SELT LKG+GPATA
Sbjct: 61  DLMRWKLTRGKWRPRLLDFVSALDEAVVKSASQKAFQALPDISKAISELTVLKGLGPATA 120

Query: 121 SAILAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLLFANKLQEKAKELSLEGETFTPSD 180
           SA+LAAYAPDVAPFMSDEAM AALGNSKDY+LKQYLLF NKLQEKAKEL+ EGETFTPSD
Sbjct: 121 SAVLAAYAPDVAPFMSDEAMVAALGNSKDYTLKQYLLFVNKLQEKAKELTAEGETFTPSD 180

Query: 181 VERALWSRAIGEKLKGSQSQLD-PNNGGKTGTKRKRK 217
           VERALWS A+G KL  SQS  D   +  K   KRKRK
Sbjct: 181 VERALWSGAVGAKLPSSQSDPDLKTDKSKNPNKRKRK 217

The following BLAST results are available for this feature:

BLAST of MELO3C016844T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3W6_CUCSA	5.7e-114	95.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G645280 PE=4 SV=1	[more]
M5XSQ2_PRUPE	1.4e-88	78.34	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011235mg PE=4 SV=1	[more]
A0A061FEA1_THECC	1.1e-85	75.46	Gb:AAF48080.1 OS=Theobroma cacao GN=TCM_034642 PE=4 SV=1	[more]
M5W816_PRUPE	3.3e-85	80.20	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022189mg PE=4 S...	[more]
F6H169_VITVI	2.4e-83	74.54	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g08560 PE=4 SV=...	[more]

BLAST of MELO3C016844T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12210.2	5.4e-79	70.23	DNA binding	[more]

BLAST of MELO3C016844T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659103680\|ref\|XP_008452684.1\|	3.2e-118	100.00	PREDICTED: uncharacterized protein LOC103493629 isoform X1 [Cucumis melo]	[more]
gi\|449447089\|ref\|XP_004141302.1\|	8.2e-114	95.89	PREDICTED: uncharacterized protein LOC101204707 isoform X1 [Cucumis sativus]	[more]
gi\|659103683\|ref\|XP_008452685.1\|	4.1e-97	86.76	PREDICTED: uncharacterized protein LOC103493629 isoform X2 [Cucumis melo]	[more]
gi\|778696518\|ref\|XP_011654161.1\|	2.1e-93	83.56	PREDICTED: uncharacterized protein LOC101204707 isoform X2 [Cucumis sativus]	[more]
gi\|596187364\|ref\|XP_007223399.1\|	2.0e-88	78.34	hypothetical protein PRUPE_ppa011235mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C016844	MELO3C016844	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C016844T1	MELO3C016844T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C016844T1.cds1	MELO3C016844T1.cds1	CDS
MELO3C016844T1.cds2	MELO3C016844T1.cds2	CDS
MELO3C016844T1.cds3	MELO3C016844T1.cds3	CDS
MELO3C016844T1.cds4	MELO3C016844T1.cds4	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21521	UNCHARACTERIZED	coord: 3..194 score: 2.1