Cla019878 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla019878
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Ctp (Fragment) (AHRD V1 -- Q6GX33_CUCME)
Location	Chr2 : 26257938 .. 26258612 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGACCACAGCCATAGCTCCTTCAAGTGGCTCCATTTTCTTCAAACCCCTCCTCAGTTTTACCCTTTCAAATCCCATAATTCCACCCAAATCCCCATTCCTCTGGACGCTTGTAGCAGTTTCCAATGGATTGCGGGCTCAATCATCAATCATTTGCGCTAGAAAGAAGAAGAGAAGTCCCGGATTTCAGAGATCAACCAAATTGGTGCTTGAATTGGCTTCTCTCTTAGCCTCCAATCTCAAGATCTTGCCGCCACCGCTGGACTTGGTCGTCGAGGCATTGAGTGGTGGAGATGGAAATGGAGGTGGTTCGCGGCTGTGGAGGGGTTTTGGTGGAGGTGGCTATGATGGATGGAGAGGTAAAAGGAAGAATACGTCATTGTTGATTGGGTTTTTGTTTGTTTGTGGTTTGGCTTTGTTGTTTGTGACTGATTTTGAGATCGATGCGGTTTGTGGGGTTCTTGGATTTGCTCTATTCAGTGTTGCATTGACTCAATTGTGGCAGAAAGGTGGGATTTCTAAAGATTTCGTTTGCGGGTTTGGCCTTTTCGGCATTTTGATTGCCTTGGGATTGAGAAGATCTGAAGTGCAAAAATGGGTTGGAAAATTAGGGATTTACAGTCCAAAGATGAAGAGTTTGAGCAGAAAACTTAAAGGCAAGAAAATTTTCTGA

mRNA sequence

ATGCAGACCACAGCCATAGCTCCTTCAAGTGGCTCCATTTTCTTCAAACCCCTCCTCAGTTTTACCCTTTCAAATCCCATAATTCCACCCAAATCCCCATTCCTCTGGACGCTTGTAGCAGTTTCCAATGGATTGCGGGCTCAATCATCAATCATTTGCGCTAGAAAGAAGAAGAGAAGTCCCGGATTTCAGAGATCAACCAAATTGGTGCTTGAATTGGCTTCTCTCTTAGCCTCCAATCTCAAGATCTTGCCGCCACCGCTGGACTTGGTCGTCGAGGCATTGAGTGGTGGAGATGGAAATGGAGGTGGTTCGCGGCTGTGGAGGGGTTTTGGTGGAGGTGGCTATGATGGATGGAGAGGTAAAAGGAAGAATACGTCATTGTTGATTGGGTTTTTGTTTGTTTGTGGTTTGGCTTTGTTGTTTGTGACTGATTTTGAGATCGATGCGGTTTGTGGGGTTCTTGGATTTGCTCTATTCAGTGTTGCATTGACTCAATTGTGGCAGAAAGGTGGGATTTCTAAAGATTTCGTTTGCGGGTTTGGCCTTTTCGGCATTTTGATTGCCTTGGGATTGAGAAGATCTGAAGTGCAAAAATGGGTTGGAAAATTAGGGATTTACAGTCCAAAGATGAAGAGTTTGAGCAGAAAACTTAAAGGCAAGAAAATTTTCTGA

Coding sequence (CDS)

ATGCAGACCACAGCCATAGCTCCTTCAAGTGGCTCCATTTTCTTCAAACCCCTCCTCAGTTTTACCCTTTCAAATCCCATAATTCCACCCAAATCCCCATTCCTCTGGACGCTTGTAGCAGTTTCCAATGGATTGCGGGCTCAATCATCAATCATTTGCGCTAGAAAGAAGAAGAGAAGTCCCGGATTTCAGAGATCAACCAAATTGGTGCTTGAATTGGCTTCTCTCTTAGCCTCCAATCTCAAGATCTTGCCGCCACCGCTGGACTTGGTCGTCGAGGCATTGAGTGGTGGAGATGGAAATGGAGGTGGTTCGCGGCTGTGGAGGGGTTTTGGTGGAGGTGGCTATGATGGATGGAGAGGTAAAAGGAAGAATACGTCATTGTTGATTGGGTTTTTGTTTGTTTGTGGTTTGGCTTTGTTGTTTGTGACTGATTTTGAGATCGATGCGGTTTGTGGGGTTCTTGGATTTGCTCTATTCAGTGTTGCATTGACTCAATTGTGGCAGAAAGGTGGGATTTCTAAAGATTTCGTTTGCGGGTTTGGCCTTTTCGGCATTTTGATTGCCTTGGGATTGAGAAGATCTGAAGTGCAAAAATGGGTTGGAAAATTAGGGATTTACAGTCCAAAGATGAAGAGTTTGAGCAGAAAACTTAAAGGCAAGAAAATTTTCTGA

Protein sequence

MQTTAIAPSSGSIFFKPLLSFTLSNPIIPPKSPFLWTLVAVSNGLRAQSSIICARKKKRSPGFQRSTKLVLELASLLASNLKILPPPLDLVVEALSGGDGNGGGSRLWRGFGGGGYDGWRGKRKNTSLLIGFLFVCGLALLFVTDFEIDAVCGVLGFALFSVALTQLWQKGGISKDFVCGFGLFGILIALGLRRSEVQKWVGKLGIYSPKMKSLSRKLKGKKIF

Homology

[Close]

BLAST of Cla019878 vs. TrEMBL
Match: Q84KA4_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.5e-98
Identity = 187/225 (83.11%), Postives = 198/225 (88.00%), Query Frame = 1


Query: 1   MQTTAIAPSSG-SIFFKPLLSFTLSNPIIPPKSPFLWTLVAVSNGLRAQSSIICARKKKR 60
           M TTAIA SS  SIFF PLL+FTLSNPI PPKSPF+ TLVAVS+GL+ Q+  ICARKKKR
Sbjct: 1   MHTTAIASSSSCSIFFNPLLNFTLSNPITPPKSPFISTLVAVSDGLQPQTLTICARKKKR 60

Query: 61  SPGFQRSTKLVLELASLLASNLKILPPPLDLVVEALSGGDGNGGGSRLWRGFGGGGYDGW 120
           SPGFQRSTKLVLELASLLASN+KILPPPLDLVV  LSGGDGNGGGSRLWRGFG G YDGW
Sbjct: 61  SPGFQRSTKLVLELASLLASNIKILPPPLDLVVAELSGGDGNGGGSRLWRGFGEGDYDGW 120

Query: 121 RGKRKNTSLLIGFLFVCGLALLFVTDFEIDAVCGVLGFALFSVALTQLWQKGGISKDFVC 180
           RGKRK T L IGFL VCGL LLFVTDFEI+ VCG+LGFA+FSVAL QLWQK GISK FV 
Sbjct: 121 RGKRKKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWQKIGISKHFVL 180

Query: 181 GFGLFGILIALGLRRSEVQKWVGKLGIYSPKMKSLSRKLKGKKIF 225
           GFGLFGILIALGLRRSEVQKWV KLG YSPKMKSL RKLKG++IF
Sbjct: 181 GFGLFGILIALGLRRSEVQKWVRKLGFYSPKMKSLRRKLKGRRIF 225

[Close]

BLAST of Cla019878 vs. TrEMBL
Match: A0A0A0LFR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021610 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.4e-98
Identity = 187/225 (83.11%), Postives = 198/225 (88.00%), Query Frame = 1


Query: 1   MQTTAIAPSSG-SIFFKPLLSFTLSNPIIPPKSPFLWTLVAVSNGLRAQSSIICARKKKR 60
           MQTT IA SS  SIFF PLL+FTLSNPI PPKS F+ T+VAVS+GL+ Q+  ICARKKKR
Sbjct: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60

Query: 61  SPGFQRSTKLVLELASLLASNLKILPPPLDLVVEALSGGDGNGGGSRLWRGFGGGGYDGW 120
           SPGFQRSTKLV ELASLLASNLKILPPPLDLVV  LSGGDGNGGGSRLWRGFGGG YDGW
Sbjct: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120

Query: 121 RGKRKNTSLLIGFLFVCGLALLFVTDFEIDAVCGVLGFALFSVALTQLWQKGGISKDFVC 180
           RGKRK T LLIGFL VCGL LLFVTDFEI+ VCGVLGFA+F VAL QLWQK GISKDFV 
Sbjct: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180

Query: 181 GFGLFGILIALGLRRSEVQKWVGKLGIYSPKMKSLSRKLKGKKIF 225
           GFGLFGILIALGLRRSEVQ+WVGKLGIYS K KSL RKLKG++IF
Sbjct: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSSKRKSLRRKLKGRRIF 225

[Close]

BLAST of Cla019878 vs. TrEMBL
Match: W9RSC8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002442 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 4.1e-35
Identity = 81/198 (40.91%), Postives = 123/198 (62.12%), Query Frame = 1


Query: 29  PPKSPFLWTLVAVSNGLRAQSSIICARKKKRSPGFQRSTKLVLELASLLASNLKILPPPL 88
           P KSP   + ++ +  +  Q+ IICARK+++     +ST+ ++ L S++AS+LKILP PL
Sbjct: 36  PRKSPDFGSFLSNAPQIYLQNPIICARKRRKRINSDKSTRFLINLISVVASSLKILPQPL 95

Query: 89  DLVVEALSGGDGNGGGS---RLWRGFGGGGYDGWRGKRKNTSL-LIGFLFVCGLALLFVT 148
           DLV+E + GGDG  GG      W+GFG GG+DGWR +R+  +L L GF+ +CGL LLF  
Sbjct: 96  DLVLEEIGGGDGTAGGCGGLGFWKGFGWGGFDGWRKRRRKRNLWLYGFIAICGLGLLFGR 155

Query: 149 DFEIDAVCGVLGFALFSVALTQLWQKGGISKDFVCGFGLFGILIALGLRRSEVQKWVGKL 208
           + E +A    LG   F VAL Q W+K G  + +V G  L+  L+ L  RR E+QKW+ + 
Sbjct: 156 EIESNAFWWGLGLGPFGVALIQWWEKTGGVQAWVLGLCLWSFLVGLTFRREELQKWLARF 215

Query: 209 GIYSPKMKSLSRKLKGKK 223
            +  P + ++ R+++  K
Sbjct: 216 RVTIPLVDTVRRRMRRGK 233

[Close]

BLAST of Cla019878 vs. TrEMBL
Match: M5WN09_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb021895mg PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 9.2e-35
Identity = 88/213 (41.31%), Postives = 129/213 (60.56%), Query Frame = 1


Query: 22  TLSNPIIPPKSPFLWTLVAVSNGLRAQSSIICARKKKRSPGFQRSTKLVLELASLLASNL 81
           ++ N I  PKSP     +++ + ++ Q  I+CARK KR  G  R  +L+ +L  ++ SNL
Sbjct: 30  SIQNAIFVPKSPVFSVSLSLCHQIQIQKQIVCARKNKRRAGSLRLPRLLRQLMPVIVSNL 89

Query: 82  KILPPPLDLVVEALSGGDGNGGGSRLWRGF-GGGGYDGWRGKRKNTS-----LLIGFLFV 141
           KILP PLDLV+E +  GDGNGGG  +W+GF GGGG+DG+ G+++N       LL G L +
Sbjct: 90  KILPQPLDLVIEEICSGDGNGGGLGIWKGFGGGGGFDGF-GRKRNRKLFLLFLLYGILVI 149

Query: 142 CGLALLFVTDFEIDAVCGVLGFALFSVALTQLWQKGGISKDFVCGFGLFGILIALGLRRS 201
            GL LLF ++ E   +C  LGF L  VA+ Q W+K GI   F   FG  G+L+  G +R 
Sbjct: 150 SGLGLLFESEVESHVLCCGLGFGLSGVAMVQWWEKIGI---FAVFFG--GVLVGFGFKRE 209

Query: 202 EVQKWVGKLGIYSPKMKSLS----RKLKGKKIF 225
           E++KW  KL    P +++L+    R+  G++ F
Sbjct: 210 ELKKWGLKLRACYPIIETLTWRTRRRRSGRRAF 236

[Close]

BLAST of Cla019878 vs. TrEMBL
Match: A0A061F2T8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_026578 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.0e-33
Identity = 92/218 (42.20%), Postives = 125/218 (57.34%), Query Frame = 1


Query: 12  SIFFKPLLSFTLSNPII--PPKSPFLWTLVAVSNGLRAQSSIICARKKKRSPGFQRSTKL 71
           ++ F P L  TLS        KSP        S+  + Q  IICARK +R  G +RSTK 
Sbjct: 17  NLIFNPFLETTLSLQSFNCSSKSPIFTPSGLFSHKTQIQKPIICARKSRRRYGSERSTKF 76

Query: 72  VLELASLLASNLKILPPPLDLVVEALSGGDGNGGGSRLWRGFGGGGYDGWRGKRKNTSL- 131
           VLEL S+LASNLKILP PLDLVVE+L G D  GGG     GF GG ++GWR + + T+  
Sbjct: 77  VLELISILASNLKILPQPLDLVVESLVGAD--GGGLEFLNGFKGGSFNGWRRRTRRTNWK 136

Query: 132 ----LIGFLFVCGLALLFVTDFEIDAVCGVLGFALFSVALTQLWQKGGISKDFVCGFGLF 191
                +GFL  C L LLF  +   + + G LGF  F +AL + W++G   KD++ GF   
Sbjct: 137 KILGFLGFLGFCVLCLLFGKELRSELLFGGLGFGFFLIALIKEWRRG--LKDWIFGFCCV 196

Query: 192 GILIALGLRRSEVQKWV--GKLGIYSPKMKSLSRKLKG 221
            +L+ LGLR +E  KW+   K+   SP ++++ R  +G
Sbjct: 197 AVLVGLGLRGNEAMKWIKQTKVSSSSPMVENVRRGKRG 230

[Close]

BLAST of Cla019878 vs. NCBI nr
Match: gi|659070394|ref|XP_008454859.1| (PREDICTED: uncharacterized protein LOC103495165 [Cucumis melo])

HSP 1 Score: 370.2 bits (949), Expect = 2.6e-99
Identity = 188/225 (83.56%), Postives = 199/225 (88.44%), Query Frame = 1


Query: 1   MQTTAIAPSSG-SIFFKPLLSFTLSNPIIPPKSPFLWTLVAVSNGLRAQSSIICARKKKR 60
           M TTAIA SS  SIFF PLL+FTLSNPI PPKSPF+ TLVAVS+GL+ Q+  ICARKKKR
Sbjct: 1   MHTTAIASSSSCSIFFNPLLNFTLSNPITPPKSPFISTLVAVSDGLQPQTLTICARKKKR 60

Query: 61  SPGFQRSTKLVLELASLLASNLKILPPPLDLVVEALSGGDGNGGGSRLWRGFGGGGYDGW 120
           SPGFQRSTKLVLELASLLASN+KILPPPLDLVV  LSGGDGNGGGSRLWRGFGGG YDGW
Sbjct: 61  SPGFQRSTKLVLELASLLASNIKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120

Query: 121 RGKRKNTSLLIGFLFVCGLALLFVTDFEIDAVCGVLGFALFSVALTQLWQKGGISKDFVC 180
           RGKRK T L IGFL VCGL LLFVTDFEI+ VCG+LGFA+FSVAL QLWQK GISK FV 
Sbjct: 121 RGKRKKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWQKIGISKHFVL 180

Query: 181 GFGLFGILIALGLRRSEVQKWVGKLGIYSPKMKSLSRKLKGKKIF 225
           GFGLFGILIALGLRRSEVQKWV KLG YSPKMKSL RKLKG++IF
Sbjct: 181 GFGLFGILIALGLRRSEVQKWVRKLGFYSPKMKSLRRKLKGRRIF 225

[Close]

BLAST of Cla019878 vs. NCBI nr
Match: gi|28558787|gb|AAO45758.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 367.1 bits (941), Expect = 2.2e-98
Identity = 187/225 (83.11%), Postives = 198/225 (88.00%), Query Frame = 1


Query: 1   MQTTAIAPSSG-SIFFKPLLSFTLSNPIIPPKSPFLWTLVAVSNGLRAQSSIICARKKKR 60
           M TTAIA SS  SIFF PLL+FTLSNPI PPKSPF+ TLVAVS+GL+ Q+  ICARKKKR
Sbjct: 1   MHTTAIASSSSCSIFFNPLLNFTLSNPITPPKSPFISTLVAVSDGLQPQTLTICARKKKR 60

Query: 61  SPGFQRSTKLVLELASLLASNLKILPPPLDLVVEALSGGDGNGGGSRLWRGFGGGGYDGW 120
           SPGFQRSTKLVLELASLLASN+KILPPPLDLVV  LSGGDGNGGGSRLWRGFG G YDGW
Sbjct: 61  SPGFQRSTKLVLELASLLASNIKILPPPLDLVVAELSGGDGNGGGSRLWRGFGEGDYDGW 120

Query: 121 RGKRKNTSLLIGFLFVCGLALLFVTDFEIDAVCGVLGFALFSVALTQLWQKGGISKDFVC 180
           RGKRK T L IGFL VCGL LLFVTDFEI+ VCG+LGFA+FSVAL QLWQK GISK FV 
Sbjct: 121 RGKRKKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWQKIGISKHFVL 180

Query: 181 GFGLFGILIALGLRRSEVQKWVGKLGIYSPKMKSLSRKLKGKKIF 225
           GFGLFGILIALGLRRSEVQKWV KLG YSPKMKSL RKLKG++IF
Sbjct: 181 GFGLFGILIALGLRRSEVQKWVRKLGFYSPKMKSLRRKLKGRRIF 225

[Close]

BLAST of Cla019878 vs. NCBI nr
Match: gi|449443183|ref|XP_004139360.1| (PREDICTED: uncharacterized protein LOC101213268 [Cucumis sativus])

HSP 1 Score: 365.9 bits (938), Expect = 4.9e-98
Identity = 187/225 (83.11%), Postives = 198/225 (88.00%), Query Frame = 1


Query: 1   MQTTAIAPSSG-SIFFKPLLSFTLSNPIIPPKSPFLWTLVAVSNGLRAQSSIICARKKKR 60
           MQTT IA SS  SIFF PLL+FTLSNPI PPKS F+ T+VAVS+GL+ Q+  ICARKKKR
Sbjct: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60

Query: 61  SPGFQRSTKLVLELASLLASNLKILPPPLDLVVEALSGGDGNGGGSRLWRGFGGGGYDGW 120
           SPGFQRSTKLV ELASLLASNLKILPPPLDLVV  LSGGDGNGGGSRLWRGFGGG YDGW
Sbjct: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120

Query: 121 RGKRKNTSLLIGFLFVCGLALLFVTDFEIDAVCGVLGFALFSVALTQLWQKGGISKDFVC 180
           RGKRK T LLIGFL VCGL LLFVTDFEI+ VCGVLGFA+F VAL QLWQK GISKDFV 
Sbjct: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180

Query: 181 GFGLFGILIALGLRRSEVQKWVGKLGIYSPKMKSLSRKLKGKKIF 225
           GFGLFGILIALGLRRSEVQ+WVGKLGIYS K KSL RKLKG++IF
Sbjct: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSSKRKSLRRKLKGRRIF 225

[Close]

BLAST of Cla019878 vs. NCBI nr
Match: gi|1009117214|ref|XP_015875196.1| (PREDICTED: uncharacterized protein LOC107412014 [Ziziphus jujuba])

HSP 1 Score: 164.9 bits (416), Expect = 1.7e-37
Identity = 89/196 (45.41%), Postives = 125/196 (63.78%), Query Frame = 1


Query: 27  IIPPKSPFLWTLVAVSNGLRAQSSIICARKKKRSPGFQRSTKLVLELASLLASNLKILPP 86
           I  P+SP +   ++  +G + Q  IICARK+KR     RS KL+ +L  ++ASNLKI P 
Sbjct: 35  ISTPRSPTVGLSLSHCHGNQTQKPIICARKRKRQILSARSRKLMFQLIPIIASNLKISPQ 94

Query: 87  PLDLVVEALSGGDGNGGGSRLWRGFGGGGYDGWRGKRKNTSLLIGFLFVCGLALLFVTDF 146
           PLD ++  ++GGDG+GGG   W+GFG GG+DGWR KRK   LL GFL +  L  L   + 
Sbjct: 95  PLDWLIAEIAGGDGSGGGLGFWKGFGWGGFDGWRRKRKRNLLLCGFLLIFCLGFLCGREI 154

Query: 147 EIDAVCGVLGFALFSVALTQLWQKGGISKDFVCGFGLFGILIALGLRRSEVQKWVGKLGI 206
           E + V  VLGF+   VAL QL  K GI + ++ GF L  + ++L LRR EVQKWVGK GI
Sbjct: 155 ESNVVWWVLGFSPIGVALIQLLGKRGI-QSWIFGFCLCIVSVSLCLRREEVQKWVGKFGI 214

Query: 207 YSPKMKSLSRKLKGKK 223
           +S  +++  R+ + ++
Sbjct: 215 FSSMIETERRRRRRRR 229

[Close]

BLAST of Cla019878 vs. NCBI nr
Match: gi|645222234|ref|XP_008246494.1| (PREDICTED: uncharacterized protein LOC103344659 [Prunus mume])

HSP 1 Score: 157.5 bits (397), Expect = 2.7e-35
Identity = 93/236 (39.41%), Postives = 139/236 (58.90%), Query Frame = 1


Query: 1   MQTTAIAPSSGSIFFKPLL--SFTLSNPIIPPKSPFLWTLVAVSNGLRAQSSIICARKKK 60
           +QT      S    F P++  + ++ N I  PKSP     +++ + ++ Q  I+CARK K
Sbjct: 7   LQTQPDFSKSSLCLFNPIVKTNTSIQNAIFVPKSPVFSVSLSLCHEIQIQKQIVCARKNK 66

Query: 61  RSPGFQRSTKLVLELASLLASNLKILPPPLDLVVEALSGGDGNGGGSRLWRGF-GGGGYD 120
           R  G  R  +L+ +L  ++ SNLKILP PLDLV+E +  GDGNGGG  +W+GF GGGG+D
Sbjct: 67  RRDGSLRLPRLLRQLMPVILSNLKILPQPLDLVIEEICSGDGNGGGLGIWKGFGGGGGFD 126

Query: 121 GWRGKRKNTS-----LLIGFLFVCGLALLFVTDFEIDAVCGVLGFALFSVALTQLWQKGG 180
           G+ G+++N       LL G L + GL LLF ++ E + +C  LGF L  VA+ Q W+K G
Sbjct: 127 GF-GRKRNRKLFLLFLLSGILVISGLGLLFGSEVESNVLCCGLGFGLSGVAMVQWWEKIG 186

Query: 181 ISKDFVCGFGLFGILIALGLRRSEVQKWVGKLGIYSPKMKSLS----RKLKGKKIF 225
           I   F   FG  G+L+  G +R E++KW  KL    P +++L+    R+  G++ F
Sbjct: 187 I---FAVFFG--GVLVGFGFKREELKKWGLKLRACYPIIETLTWRTRRRRSGRRAF 236

The following BLAST results are available for this feature:

BLAST of Cla019878 vs. TrEMBL


Match Name	E-value	Identity	Description
Q84KA4_CUCME	1.5e-98	83.11	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0LFR0_CUCSA	3.4e-98	83.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021610 PE=4 SV=1	[more]
W9RSC8_9ROSA	4.1e-35	40.91	Uncharacterized protein OS=Morus notabilis GN=L484_002442 PE=4 SV=1	[more]
M5WN09_PRUPE	9.2e-35	41.31	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb021895mg PE=4 SV=1	[more]
A0A061F2T8_THECC	1.0e-33	42.20	Uncharacterized protein OS=Theobroma cacao GN=TCM_026578 PE=4 SV=1	[more]

BLAST of Cla019878 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070394\|ref\|XP_008454859.1\|	2.6e-99	83.56	PREDICTED: uncharacterized protein LOC103495165 [Cucumis melo]	[more]
gi\|28558787\|gb\|AAO45758.1\|	2.2e-98	83.11	hypothetical protein [Cucumis melo subsp. melo]	[more]
gi\|449443183\|ref\|XP_004139360.1\|	4.9e-98	83.11	PREDICTED: uncharacterized protein LOC101213268 [Cucumis sativus]	[more]
gi\|1009117214\|ref\|XP_015875196.1\|	1.7e-37	45.41	PREDICTED: uncharacterized protein LOC107412014 [Ziziphus jujuba]	[more]
gi\|645222234\|ref\|XP_008246494.1\|	2.7e-35	39.41	PREDICTED: uncharacterized protein LOC103344659 [Prunus mume]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla019878	Cla019878.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla019878	Cla97C02G041690	Watermelon (97103) v2	wmwmbB316
Cla019878	Csa2G021610	Cucumber (Chinese Long) v2	cuwmB147
Cla019878	MELO3C004280	Melon (DHL92) v3.5.1	mewmB418
Cla019878	ClCG02G015920	Watermelon (Charleston Gray)	wcgwmB197
Cla019878	CSPI02G03800	Wild cucumber (PI 183967)	cpiwmB149
Cla019878	CmaCh05G011490	Cucurbita maxima (Rimu)	cmawmB764
Cla019878	CmoCh05G011600	Cucurbita moschata (Rifu)	cmowmB757
Cla019878	Lsi11G005290	Bottle gourd (USVL1VR-Ls)	lsiwmB107
Cla019878	Cp4.1LG11g09480	Cucurbita pepo (Zucchini)	cpewmB113
Cla019878	CsGy2G003890	Cucumber (Gy14) v2	cgybwmB140
Cla019878	MELO3C004280.2	Melon (DHL92) v3.6.1	medwmB407
Cla019878	Carg12893	Silver-seed gourd	carwmB0907
Cla019878	CsaV3_2G005120	Cucumber (Chinese Long) v3	cucwmB159
Cla019878	Bhi05G001655	Wax gourd	wgowmB276

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla019878	Silver-seed gourd	carwmB0714
Cla019878	Cucumber (Gy14) v1	cgywmB105
Cla019878	Cucurbita maxima (Rimu)	cmawmB170
Cla019878	Cucurbita moschata (Rifu)	cmowmB156
Cla019878	Cucurbita pepo (Zucchini)	cpewmB806