Csa2G021610 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa2G021610
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Ctp
Location	Chr2 : 2618964 .. 2619816 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGAACTTCAAACTCCAAACTCGAAAGTATGTGGATCGCAACGGTCATTTATACGTCATCTTCTCCTCTATCTATCTCTCCCTCCAAAAGCAAAGCATCAAACTAAAATGCAGACCACAACTATAGCTTCTTCTTCAACTTGCTCCATTTTCTTCAACCCTCTTCTCAATTTCACCCTTTCAAATCCCATAACTCCACCCAAATCCCTATTCATTTCCACCATTGTTGCAGTTTCCGATGGATTGCAGCCTCAAACATTGACCATTTGCGCTAGAAAGAAGAAGAGAAGTCCTGGGTTTCAGAGATCAACCAAATTAGTGTTTGAATTGGCTTCTCTCTTAGCCTCCAATCTCAAGATCTTACCGCCGCCTCTGGATTTAGTCGTCGCGGAATTGAGCGGAGGAGATGGTAACGGAGGTGGTTCGAGGCTGTGGAGGGGTTTTGGTGGAGGTGACTATGATGGATGGAGAGGTAAAAGGAAGAAGACGCCGTTGTTGATTGGGTTTTTGATTGTTTGTGGTTTGGTTTTGTTGTTTGTGACTGATTTTGAGATCAATGTGGTTTGTGGGGTTCTTGGATTTGCTGTATTCGGTGTTGCATTGATTCAATTGTGGCAGAAAATCGGGATTTCGAAAGATTTTGTTTTGGGGTTTGGCCTTTTTGGCATTTTGATTGCCTTGGGATTGAGAAGATCTGAAGTGCAAAGATGGGTTGGGAAATTAGGGATTTACAGTTCAAAGAGGAAGAGTTTGAGAAGAAAACTTAAAGGTAGGAGAATCTTCTGAGCGAGCTATTCGATAAAGACTATATTATCTATTATGCATTTTTTTTTCTTCGAATGAGATTATAGCGA

mRNA sequence

ATGCAGACCACAACTATAGCTTCTTCTTCAACTTGCTCCATTTTCTTCAACCCTCTTCTCAATTTCACCCTTTCAAATCCCATAACTCCACCCAAATCCCTATTCATTTCCACCATTGTTGCAGTTTCCGATGGATTGCAGCCTCAAACATTGACCATTTGCGCTAGAAAGAAGAAGAGAAGTCCTGGGTTTCAGAGATCAACCAAATTAGTGTTTGAATTGGCTTCTCTCTTAGCCTCCAATCTCAAGATCTTACCGCCGCCTCTGGATTTAGTCGTCGCGGAATTGAGCGGAGGAGATGGTAACGGAGGTGGTTCGAGGCTGTGGAGGGGTTTTGGTGGAGGTGACTATGATGGATGGAGAGGTAAAAGGAAGAAGACGCCGTTGTTGATTGGGTTTTTGATTGTTTGTGGTTTGGTTTTGTTGTTTGTGACTGATTTTGAGATCAATGTGGTTTGTGGGGTTCTTGGATTTGCTGTATTCGGTGTTGCATTGATTCAATTGTGGCAGAAAATCGGGATTTCGAAAGATTTTGTTTTGGGGTTTGGCCTTTTTGGCATTTTGATTGCCTTGGGATTGAGAAGATCTGAAGTGCAAAGATGGGTTGGGAAATTAGGGATTTACAGTTCAAAGAGGAAGAGTTTGAGAAGAAAACTTAAAGGTAGGAGAATCTTCTGA

Coding sequence (CDS)

ATGCAGACCACAACTATAGCTTCTTCTTCAACTTGCTCCATTTTCTTCAACCCTCTTCTCAATTTCACCCTTTCAAATCCCATAACTCCACCCAAATCCCTATTCATTTCCACCATTGTTGCAGTTTCCGATGGATTGCAGCCTCAAACATTGACCATTTGCGCTAGAAAGAAGAAGAGAAGTCCTGGGTTTCAGAGATCAACCAAATTAGTGTTTGAATTGGCTTCTCTCTTAGCCTCCAATCTCAAGATCTTACCGCCGCCTCTGGATTTAGTCGTCGCGGAATTGAGCGGAGGAGATGGTAACGGAGGTGGTTCGAGGCTGTGGAGGGGTTTTGGTGGAGGTGACTATGATGGATGGAGAGGTAAAAGGAAGAAGACGCCGTTGTTGATTGGGTTTTTGATTGTTTGTGGTTTGGTTTTGTTGTTTGTGACTGATTTTGAGATCAATGTGGTTTGTGGGGTTCTTGGATTTGCTGTATTCGGTGTTGCATTGATTCAATTGTGGCAGAAAATCGGGATTTCGAAAGATTTTGTTTTGGGGTTTGGCCTTTTTGGCATTTTGATTGCCTTGGGATTGAGAAGATCTGAAGTGCAAAGATGGGTTGGGAAATTAGGGATTTACAGTTCAAAGAGGAAGAGTTTGAGAAGAAAACTTAAAGGTAGGAGAATCTTCTGA

Protein sequence

MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKRSPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGWRGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVLGFGLFGILIALGLRRSEVQRWVGKLGIYSSKRKSLRRKLKGRRIF*

Homology

[Close]

BLAST of Csa2G021610 vs. TrEMBL
Match: A0A0A0LFR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021610 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 7.0e-123
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1


Query: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60
           MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR
Sbjct: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60

Query: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120
           SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW
Sbjct: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120

Query: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180
           RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL
Sbjct: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180

Query: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSSKRKSLRRKLKGRRIF 226
           GFGLFGILIALGLRRSEVQRWVGKLGIYSSKRKSLRRKLKGRRIF
Sbjct: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSSKRKSLRRKLKGRRIF 225

[Close]

BLAST of Csa2G021610 vs. TrEMBL
Match: Q84KA4_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 3.2e-112
Identity = 206/225 (91.56%), Postives = 212/225 (94.22%), Query Frame = 1


Query: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60
           M TT IASSS+CSIFFNPLLNFTLSNPITPPKS FIST+VAVSDGLQPQTLTICARKKKR
Sbjct: 1   MHTTAIASSSSCSIFFNPLLNFTLSNPITPPKSPFISTLVAVSDGLQPQTLTICARKKKR 60

Query: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120
           SPGFQRSTKLV ELASLLASN+KILPPPLDLVVAELSGGDGNGGGSRLWRGFG GDYDGW
Sbjct: 61  SPGFQRSTKLVLELASLLASNIKILPPPLDLVVAELSGGDGNGGGSRLWRGFGEGDYDGW 120

Query: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180
           RGKRKKTPL IGFL+VCGLVLLFVTDFEIN VCG+LGFAVF VALIQLWQKIGISK FVL
Sbjct: 121 RGKRKKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWQKIGISKHFVL 180

Query: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSSKRKSLRRKLKGRRIF 226
           GFGLFGILIALGLRRSEVQ+WV KLG YS K KSLRRKLKGRRIF
Sbjct: 181 GFGLFGILIALGLRRSEVQKWVRKLGFYSPKMKSLRRKLKGRRIF 225

[Close]

BLAST of Csa2G021610 vs. TrEMBL
Match: M5WN09_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb021895mg PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.4e-35
Identity = 96/230 (41.74%), Postives = 137/230 (59.57%), Query Frame = 1


Query: 7   ASSSTCSIFFNPLL--NFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKRSPGF 66
           + SS C   FN ++  N ++ N I  PKS   S  +++   +Q Q   +CARK KR  G 
Sbjct: 14  SKSSLC--LFNHIVKTNTSIQNAIFVPKSPVFSVSLSLCHQIQIQKQIVCARKNKRRAGS 73

Query: 67  QRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGF-GGGDYDGWRGK 126
            R  +L+ +L  ++ SNLKILP PLDLV+ E+  GDGNGGG  +W+GF GGG +DG+  K
Sbjct: 74  LRLPRLLRQLMPVIVSNLKILPQPLDLVIEEICSGDGNGGGLGIWKGFGGGGGFDGFGRK 133

Query: 127 RKKTP----LLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFV 186
           R +      LL G L++ GL LLF ++ E +V+C  LGF + GVA++Q W+KIGI   F 
Sbjct: 134 RNRKLFLLFLLYGILVISGLGLLFESEVESHVLCCGLGFGLSGVAMVQWWEKIGI---FA 193

Query: 187 LGFGLFGILIALGLRRSEVQRWVGKL----GIYSSKRKSLRRKLKGRRIF 226
           + FG  G+L+  G +R E+++W  KL     I  +     RR+  GRR F
Sbjct: 194 VFFG--GVLVGFGFKREELKKWGLKLRACYPIIETLTWRTRRRRSGRRAF 236

[Close]

BLAST of Csa2G021610 vs. TrEMBL
Match: W9RSC8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002442 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.6e-34
Identity = 88/217 (40.55%), Postives = 129/217 (59.45%), Query Frame = 1


Query: 16  FNPLLNFTLSNPITP--PKSLFISTIVAVSDGLQPQTLTICARKKKRSPGFQRSTKLVFE 75
           FN +   T+S  I+P   KS    + ++ +  +  Q   ICARK+++     +ST+ +  
Sbjct: 20  FNTIAERTVSLQISPFPRKSPDFGSFLSNAPQIYLQNPIICARKRRKRINSDKSTRFLIN 79

Query: 76  LASLLASNLKILPPPLDLVVAELSGGDGNGGGSR---LWRGFGGGDYDGWRGKRKKTPL- 135
           L S++AS+LKILP PLDLV+ E+ GGDG  GG      W+GFG G +DGWR +R+K  L 
Sbjct: 80  LISVVASSLKILPQPLDLVLEEIGGGDGTAGGCGGLGFWKGFGWGGFDGWRKRRRKRNLW 139

Query: 136 LIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVLGFGLFGILI 195
           L GF+ +CGL LLF  + E N     LG   FGVALIQ W+K G  + +VLG  L+  L+
Sbjct: 140 LYGFIAICGLGLLFGREIESNAFWWGLGLGPFGVALIQWWEKTGGVQAWVLGLCLWSFLV 199

Query: 196 ALGLRRSEVQRWVGK----LGIYSSKRKSLRRKLKGR 223
            L  RR E+Q+W+ +    + +  + R+ +RR  +GR
Sbjct: 200 GLTFRREELQKWLARFRVTIPLVDTVRRRMRRGKRGR 236

[Close]

BLAST of Csa2G021610 vs. TrEMBL
Match: Q6GX33_CUCME (Ctp (Fragment) OS=Cucumis melo GN=Ctp PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.5e-34
Identity = 76/89 (85.39%), Postives = 80/89 (89.89%), Query Frame = 1


Query: 125 KKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVLGFGL 184
           KKTPL IGFL+VCGLVLLFVTDFEIN VCG+LGFAVF VALIQLW+KIGISK FVLGFGL
Sbjct: 1   KKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWRKIGISKHFVLGFGL 60

Query: 185 FGILIALGLRRSEVQRWVGKLGIYSSKRK 214
           FGILIALGL RSEVQ+WV KLG YS K K
Sbjct: 61  FGILIALGLGRSEVQKWVRKLGFYSPKMK 89

[Close]

BLAST of Csa2G021610 vs. TAIR10
Match: AT5G27440.1 (AT5G27440.1 unknown protein)

HSP 1 Score: 109.4 bits (272), Expect = 3.0e-24
Identity = 61/150 (40.67%), Postives = 90/150 (60.00%), Query Frame = 1


Query: 28  ITPPKSLFISTIVAVSDGL----QPQTLTICARKKKRSPGFQRSTKLVFELASLLASNLK 87
           + P KSL +S+I  VS  +    Q Q+L +CA+K+K+  G++R T+ +F   SLLA NL+
Sbjct: 16  LNPQKSLRLSSISRVSSSISHRTQFQSLVLCAKKRKQRVGYRRITRFLFNSLSLLAPNLQ 75

Query: 88  ILPPPLDLVVAELSGGDGNGGGS---RLWRGFGGGDYDGWRGKRKKTPLLIGFLIVC--- 147
           ILP PLDLV+A+L G DG GGG      WRG+  G +DGWR K+ K P+L+   ++    
Sbjct: 76  ILPQPLDLVIADLGGVDGGGGGRGGLGFWRGW--GRFDGWRRKKNKVPILVFVCVILWIY 135

Query: 148 GLVLLFVTDFEINVVCGVLGFAVFGVALIQ 168
           G   +   + +  +V  VLG  +FGV +++
Sbjct: 136 GFCKISGIEIKSELVLKVLGLCLFGVTVVK 163

[Close]

BLAST of Csa2G021610 vs. NCBI nr
Match: gi|449443183|ref|XP_004139360.1| (PREDICTED: uncharacterized protein LOC101213268 [Cucumis sativus])

HSP 1 Score: 448.0 bits (1151), Expect = 1.0e-122
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 1


Query: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60
           MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR
Sbjct: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60

Query: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120
           SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW
Sbjct: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120

Query: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180
           RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL
Sbjct: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180

Query: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSSKRKSLRRKLKGRRIF 226
           GFGLFGILIALGLRRSEVQRWVGKLGIYSSKRKSLRRKLKGRRIF
Sbjct: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSSKRKSLRRKLKGRRIF 225

[Close]

BLAST of Csa2G021610 vs. NCBI nr
Match: gi|659070394|ref|XP_008454859.1| (PREDICTED: uncharacterized protein LOC103495165 [Cucumis melo])

HSP 1 Score: 415.6 bits (1067), Expect = 5.5e-113
Identity = 207/225 (92.00%), Postives = 213/225 (94.67%), Query Frame = 1


Query: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60
           M TT IASSS+CSIFFNPLLNFTLSNPITPPKS FIST+VAVSDGLQPQTLTICARKKKR
Sbjct: 1   MHTTAIASSSSCSIFFNPLLNFTLSNPITPPKSPFISTLVAVSDGLQPQTLTICARKKKR 60

Query: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120
           SPGFQRSTKLV ELASLLASN+KILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW
Sbjct: 61  SPGFQRSTKLVLELASLLASNIKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120

Query: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180
           RGKRKKTPL IGFL+VCGLVLLFVTDFEIN VCG+LGFAVF VALIQLWQKIGISK FVL
Sbjct: 121 RGKRKKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWQKIGISKHFVL 180

Query: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSSKRKSLRRKLKGRRIF 226
           GFGLFGILIALGLRRSEVQ+WV KLG YS K KSLRRKLKGRRIF
Sbjct: 181 GFGLFGILIALGLRRSEVQKWVRKLGFYSPKMKSLRRKLKGRRIF 225

[Close]

BLAST of Csa2G021610 vs. NCBI nr
Match: gi|28558787|gb|AAO45758.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 412.5 bits (1059), Expect = 4.6e-112
Identity = 206/225 (91.56%), Postives = 212/225 (94.22%), Query Frame = 1


Query: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60
           M TT IASSS+CSIFFNPLLNFTLSNPITPPKS FIST+VAVSDGLQPQTLTICARKKKR
Sbjct: 1   MHTTAIASSSSCSIFFNPLLNFTLSNPITPPKSPFISTLVAVSDGLQPQTLTICARKKKR 60

Query: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120
           SPGFQRSTKLV ELASLLASN+KILPPPLDLVVAELSGGDGNGGGSRLWRGFG GDYDGW
Sbjct: 61  SPGFQRSTKLVLELASLLASNIKILPPPLDLVVAELSGGDGNGGGSRLWRGFGEGDYDGW 120

Query: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180
           RGKRKKTPL IGFL+VCGLVLLFVTDFEIN VCG+LGFAVF VALIQLWQKIGISK FVL
Sbjct: 121 RGKRKKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWQKIGISKHFVL 180

Query: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSSKRKSLRRKLKGRRIF 226
           GFGLFGILIALGLRRSEVQ+WV KLG YS K KSLRRKLKGRRIF
Sbjct: 181 GFGLFGILIALGLRRSEVQKWVRKLGFYSPKMKSLRRKLKGRRIF 225

[Close]

BLAST of Csa2G021610 vs. NCBI nr
Match: gi|1009117214|ref|XP_015875196.1| (PREDICTED: uncharacterized protein LOC107412014 [Ziziphus jujuba])

HSP 1 Score: 181.0 bits (458), Expect = 2.3e-42
Identity = 106/218 (48.62%), Postives = 141/218 (64.68%), Query Frame = 1


Query: 7   ASSSTCSIF-FNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKRSPGFQ 66
           AS   CSI   N LL+ T    I+ P+S  +   ++   G Q Q   ICARK+KR     
Sbjct: 16  ASLCFCSISQMNALLHITT---ISTPRSPTVGLSLSHCHGNQTQKPIICARKRKRQILSA 75

Query: 67  RSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGWRGKRK 126
           RS KL+F+L  ++ASNLKI P PLD ++AE++GGDG+GGG   W+GFG G +DGWR KRK
Sbjct: 76  RSRKLMFQLIPIIASNLKISPQPLDWLIAEIAGGDGSGGGLGFWKGFGWGGFDGWRRKRK 135

Query: 127 KTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVLGFGLF 186
           +  LL GFL++  L  L   + E NVV  VLGF+  GVALIQL  K GI + ++ GF L 
Sbjct: 136 RNLLLCGFLLIFCLGFLCGREIESNVVWWVLGFSPIGVALIQLLGKRGI-QSWIFGFCLC 195

Query: 187 GILIALGLRRSEVQRWVGKLGIYSSKRKSLRRKLKGRR 224
            + ++L LRR EVQ+WVGK GI+SS  ++ RR+ + RR
Sbjct: 196 IVSVSLCLRREEVQKWVGKFGIFSSMIETERRRRRRRR 229

[Close]

BLAST of Csa2G021610 vs. NCBI nr
Match: gi|645222234|ref|XP_008246494.1| (PREDICTED: uncharacterized protein LOC103344659 [Prunus mume])

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36
Identity = 98/230 (42.61%), Postives = 138/230 (60.00%), Query Frame = 1


Query: 7   ASSSTCSIFFNPLL--NFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKRSPGF 66
           + SS C   FNP++  N ++ N I  PKS   S  +++   +Q Q   +CARK KR  G 
Sbjct: 14  SKSSLC--LFNPIVKTNTSIQNAIFVPKSPVFSVSLSLCHEIQIQKQIVCARKNKRRDGS 73

Query: 67  QRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGF-GGGDYDGWRGK 126
            R  +L+ +L  ++ SNLKILP PLDLV+ E+  GDGNGGG  +W+GF GGG +DG+  K
Sbjct: 74  LRLPRLLRQLMPVILSNLKILPQPLDLVIEEICSGDGNGGGLGIWKGFGGGGGFDGFGRK 133

Query: 127 RKKTP----LLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFV 186
           R +      LL G L++ GL LLF ++ E NV+C  LGF + GVA++Q W+KIGI   F 
Sbjct: 134 RNRKLFLLFLLSGILVISGLGLLFGSEVESNVLCCGLGFGLSGVAMVQWWEKIGI---FA 193

Query: 187 LGFGLFGILIALGLRRSEVQRWVGKL----GIYSSKRKSLRRKLKGRRIF 226
           + FG  G+L+  G +R E+++W  KL     I  +     RR+  GRR F
Sbjct: 194 VFFG--GVLVGFGFKREELKKWGLKLRACYPIIETLTWRTRRRRSGRRAF 236

The following BLAST results are available for this feature:

BLAST of Csa2G021610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFR0_CUCSA	7.0e-123	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021610 PE=4 SV=1	[more]
Q84KA4_CUCME	3.2e-112	91.56	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
M5WN09_PRUPE	1.4e-35	41.74	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb021895mg PE=4 SV=1	[more]
W9RSC8_9ROSA	1.6e-34	40.55	Uncharacterized protein OS=Morus notabilis GN=L484_002442 PE=4 SV=1	[more]
Q6GX33_CUCME	3.5e-34	85.39	Ctp (Fragment) OS=Cucumis melo GN=Ctp PE=2 SV=1	[more]

BLAST of Csa2G021610 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G27440.1	3.0e-24	40.67	unknown protein	[more]

BLAST of Csa2G021610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449443183\|ref\|XP_004139360.1\|	1.0e-122	100.00	PREDICTED: uncharacterized protein LOC101213268 [Cucumis sativus]	[more]
gi\|659070394\|ref\|XP_008454859.1\|	5.5e-113	92.00	PREDICTED: uncharacterized protein LOC103495165 [Cucumis melo]	[more]
gi\|28558787\|gb\|AAO45758.1\|	4.6e-112	91.56	hypothetical protein [Cucumis melo subsp. melo]	[more]
gi\|1009117214\|ref\|XP_015875196.1\|	2.3e-42	48.62	PREDICTED: uncharacterized protein LOC107412014 [Ziziphus jujuba]	[more]
gi\|645222234\|ref\|XP_008246494.1\|	1.1e-36	42.61	PREDICTED: uncharacterized protein LOC103344659 [Prunus mume]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU162879	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa2G021610.1	Csa2G021610.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU162879	CU162879	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa2G021610	Cla019878	Watermelon (97103) v1	cuwmB147
Csa2G021610	MELO3C004280	Melon (DHL92) v3.5.1	cumeB139
Csa2G021610	ClCG02G015920	Watermelon (Charleston Gray)	cuwcgB122
Csa2G021610	MELO3C004280.2	Melon (DHL92) v3.6.1	cumedB132
Csa2G021610	Cla97C02G041690	Watermelon (97103) v2	cuwmbB118
Csa2G021610	Bhi05G001655	Wax gourd	cuwgoB150
Csa2G021610	CSPI02G03800	Wild cucumber (PI 183967)	cpicuB065
Csa2G021610	CmoCh05G011600	Cucurbita moschata (Rifu)	cmocuB783
Csa2G021610	CsGy2G003890	Cucumber (Gy14) v2	cgybcuB056
Csa2G021610	Carg12893	Silver-seed gourd	carcuB0917

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa2G021610	Cucurbita maxima (Rimu)	cmacuB173
Csa2G021610	Cucurbita maxima (Rimu)	cmacuB791
Csa2G021610	Cucurbita moschata (Rifu)	cmocuB157
Csa2G021610	Cucurbita moschata (Rifu)	cmocuB782
Csa2G021610	Melon (DHL92) v3.5.1	cumeB144
Csa2G021610	Cucurbita pepo (Zucchini)	cpecuB103
Csa2G021610	Cucurbita pepo (Zucchini)	cpecuB820
Csa2G021610	Bottle gourd (USVL1VR-Ls)	culsiB098
Csa2G021610	Silver-seed gourd	carcuB0735
Csa2G021610	Cucumber (Gy14) v1	cgycuB096