CsGy2G003890 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G003890
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Ctp
Location	Chr2 : 2637715 .. 2638392 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGACCACAACTATAGCTTCTTCTTCAACTTGCTCCATTTTCTTCAACCCTCTTCTCAATTTCACCCTTTCAAATCCCATAACTCCACCCAAATCCCTATTCATTTCCACCATTGTTGCAGTTTCCGATGGATTGCAGCCTCAAACATTGACCATTTGCGCTAGAAAGAAGAAGAGAAGTCCTGGGTTTCAGAGATCAACCAAATTAGTGTTTGAATTGGCTTCTCTCTTAGCCTCCAATCTCAAGATCTTACCGCCGCCTCTGGATTTAGTCGTCGCGGAATTGAGCGGAGGAGATGGTAACGGAGGTGGTTCGAGGCTGTGGAGGGGTTTTGGTGGAGGTGACTATGATGGATGGAGAGGTAAAAGGAAGAAGACGCCGTTGTTGATTGGGTTTTTGATTGTTTGTGGTTTGGTTTTGTTGTTTGTGACTGATTTTGAGATCAATGTGGTTTGTGGGGTTCTTGGATTTGCTGTATTCGGTGTTGCATTGATTCAATTGTGGCAGAAAATCGGGATTTCGAAAGATTTTGTTTTGGGGTTTGGCCTTTTTGGCATTTTGATTGCCTTGGGATTGAGAAGATCTGAAGTGCAAAGATGGGTTGGGAAATTAGGGATTTACAGTCCAAAGAGGAAGAGTTTGAGAAGAAAACTTAAAGGTAGGAGAATCTTCTGA

mRNA sequence

ATGCAGACCACAACTATAGCTTCTTCTTCAACTTGCTCCATTTTCTTCAACCCTCTTCTCAATTTCACCCTTTCAAATCCCATAACTCCACCCAAATCCCTATTCATTTCCACCATTGTTGCAGTTTCCGATGGATTGCAGCCTCAAACATTGACCATTTGCGCTAGAAAGAAGAAGAGAAGTCCTGGGTTTCAGAGATCAACCAAATTAGTGTTTGAATTGGCTTCTCTCTTAGCCTCCAATCTCAAGATCTTACCGCCGCCTCTGGATTTAGTCGTCGCGGAATTGAGCGGAGGAGATGGTAACGGAGGTGGTTCGAGGCTGTGGAGGGGTTTTGGTGGAGGTGACTATGATGGATGGAGAGGTAAAAGGAAGAAGACGCCGTTGTTGATTGGGTTTTTGATTGTTTGTGGTTTGGTTTTGTTGTTTGTGACTGATTTTGAGATCAATGTGGTTTGTGGGGTTCTTGGATTTGCTGTATTCGGTGTTGCATTGATTCAATTGTGGCAGAAAATCGGGATTTCGAAAGATTTTGTTTTGGGGTTTGGCCTTTTTGGCATTTTGATTGCCTTGGGATTGAGAAGATCTGAAGTGCAAAGATGGGTTGGGAAATTAGGGATTTACAGTCCAAAGAGGAAGAGTTTGAGAAGAAAACTTAAAGGTAGGAGAATCTTCTGA

Coding sequence (CDS)

ATGCAGACCACAACTATAGCTTCTTCTTCAACTTGCTCCATTTTCTTCAACCCTCTTCTCAATTTCACCCTTTCAAATCCCATAACTCCACCCAAATCCCTATTCATTTCCACCATTGTTGCAGTTTCCGATGGATTGCAGCCTCAAACATTGACCATTTGCGCTAGAAAGAAGAAGAGAAGTCCTGGGTTTCAGAGATCAACCAAATTAGTGTTTGAATTGGCTTCTCTCTTAGCCTCCAATCTCAAGATCTTACCGCCGCCTCTGGATTTAGTCGTCGCGGAATTGAGCGGAGGAGATGGTAACGGAGGTGGTTCGAGGCTGTGGAGGGGTTTTGGTGGAGGTGACTATGATGGATGGAGAGGTAAAAGGAAGAAGACGCCGTTGTTGATTGGGTTTTTGATTGTTTGTGGTTTGGTTTTGTTGTTTGTGACTGATTTTGAGATCAATGTGGTTTGTGGGGTTCTTGGATTTGCTGTATTCGGTGTTGCATTGATTCAATTGTGGCAGAAAATCGGGATTTCGAAAGATTTTGTTTTGGGGTTTGGCCTTTTTGGCATTTTGATTGCCTTGGGATTGAGAAGATCTGAAGTGCAAAGATGGGTTGGGAAATTAGGGATTTACAGTCCAAAGAGGAAGAGTTTGAGAAGAAAACTTAAAGGTAGGAGAATCTTCTGA

Protein sequence

MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKRSPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGWRGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVLGFGLFGILIALGLRRSEVQRWVGKLGIYSPKRKSLRRKLKGRRIF

Homology

[Close]

BLAST of CsGy2G003890 vs. NCBI nr
Match: XP_004139360.1 (PREDICTED: uncharacterized protein LOC101213268 [Cucumis sativus] >KGN60890.1 hypothetical protein Csa_2G021610 [Cucumis sativus])

HSP 1 Score: 432.2 bits (1110), Expect = 1.1e-117
Identity = 224/225 (99.56%), Postives = 224/225 (99.56%), Query Frame = 0


Query: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60
           MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR
Sbjct: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60

Query: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120
           SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW
Sbjct: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120

Query: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180
           RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL
Sbjct: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180

Query: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSPKRKSLRRKLKGRRIF 226
           GFGLFGILIALGLRRSEVQRWVGKLGIYS KRKSLRRKLKGRRIF
Sbjct: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSSKRKSLRRKLKGRRIF 225

[Close]

BLAST of CsGy2G003890 vs. NCBI nr
Match: XP_008454859.1 (PREDICTED: uncharacterized protein LOC103495165 [Cucumis melo])

HSP 1 Score: 404.8 bits (1039), Expect = 1.9e-109
Identity = 208/225 (92.44%), Postives = 214/225 (95.11%), Query Frame = 0


Query: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60
           M TT IASSS+CSIFFNPLLNFTLSNPITPPKS FIST+VAVSDGLQPQTLTICARKKKR
Sbjct: 1   MHTTAIASSSSCSIFFNPLLNFTLSNPITPPKSPFISTLVAVSDGLQPQTLTICARKKKR 60

Query: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120
           SPGFQRSTKLV ELASLLASN+KILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW
Sbjct: 61  SPGFQRSTKLVLELASLLASNIKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120

Query: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180
           RGKRKKTPL IGFL+VCGLVLLFVTDFEIN VCG+LGFAVF VALIQLWQKIGISK FVL
Sbjct: 121 RGKRKKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWQKIGISKHFVL 180

Query: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSPKRKSLRRKLKGRRIF 226
           GFGLFGILIALGLRRSEVQ+WV KLG YSPK KSLRRKLKGRRIF
Sbjct: 181 GFGLFGILIALGLRRSEVQKWVRKLGFYSPKMKSLRRKLKGRRIF 225

[Close]

BLAST of CsGy2G003890 vs. NCBI nr
Match: AAO45758.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 401.7 bits (1031), Expect = 1.6e-108
Identity = 207/225 (92.00%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60
           M TT IASSS+CSIFFNPLLNFTLSNPITPPKS FIST+VAVSDGLQPQTLTICARKKKR
Sbjct: 1   MHTTAIASSSSCSIFFNPLLNFTLSNPITPPKSPFISTLVAVSDGLQPQTLTICARKKKR 60

Query: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120
           SPGFQRSTKLV ELASLLASN+KILPPPLDLVVAELSGGDGNGGGSRLWRGFG GDYDGW
Sbjct: 61  SPGFQRSTKLVLELASLLASNIKILPPPLDLVVAELSGGDGNGGGSRLWRGFGEGDYDGW 120

Query: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180
           RGKRKKTPL IGFL+VCGLVLLFVTDFEIN VCG+LGFAVF VALIQLWQKIGISK FVL
Sbjct: 121 RGKRKKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWQKIGISKHFVL 180

Query: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSPKRKSLRRKLKGRRIF 226
           GFGLFGILIALGLRRSEVQ+WV KLG YSPK KSLRRKLKGRRIF
Sbjct: 181 GFGLFGILIALGLRRSEVQKWVRKLGFYSPKMKSLRRKLKGRRIF 225

[Close]

BLAST of CsGy2G003890 vs. NCBI nr
Match: XP_022999121.1 (uncharacterized protein LOC111493602 isoform X1 [Cucurbita maxima])

HSP 1 Score: 338.2 bits (866), Expect = 2.2e-89
Identity = 173/221 (78.28%), Postives = 188/221 (85.07%), Query Frame = 0


Query: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60
           MQTT IA SS  SIFFNPLLNFT+SNP+ P  S F+ST+VAVSDG + QT  ICARKK+R
Sbjct: 1   MQTTAIAPSSHASIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR 60

Query: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120
            P F RSTKLV ELASL ASNLKILPPPLDLVVAELSGGDGNGGGSRLWR FGGG YDGW
Sbjct: 61  RPVFLRSTKLVLELASLFASNLKILPPPLDLVVAELSGGDGNGGGSRLWRRFGGGGYDGW 120

Query: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180
           RGKRKKTPLLIGFL++CGL L   TDFE++ +CG LGFAVF VALIQLW++ GISK FV 
Sbjct: 121 RGKRKKTPLLIGFLVLCGLALCVFTDFELDAICGALGFAVFSVALIQLWERSGISKHFVW 180

Query: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSPKRKSLRRKLKG 222
           GFGLFGILIALGLRRSEVQ+W GKLG Y PK KSLRRK+KG
Sbjct: 181 GFGLFGILIALGLRRSEVQKWAGKLGFYRPKIKSLRRKIKG 221

[Close]

BLAST of CsGy2G003890 vs. NCBI nr
Match: XP_022999122.1 (uncharacterized protein LOC111493602 isoform X2 [Cucurbita maxima])

HSP 1 Score: 338.2 bits (866), Expect = 2.2e-89
Identity = 173/221 (78.28%), Postives = 188/221 (85.07%), Query Frame = 0


Query: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60
           MQTT IA SS  SIFFNPLLNFT+SNP+ P  S F+ST+VAVSDG + QT  ICARKK+R
Sbjct: 1   MQTTAIAPSSHASIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR 60

Query: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120
            P F RSTKLV ELASL ASNLKILPPPLDLVVAELSGGDGNGGGSRLWR FGGG YDGW
Sbjct: 61  RPVFLRSTKLVLELASLFASNLKILPPPLDLVVAELSGGDGNGGGSRLWRRFGGGGYDGW 120

Query: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180
           RGKRKKTPLLIGFL++CGL L   TDFE++ +CG LGFAVF VALIQLW++ GISK FV 
Sbjct: 121 RGKRKKTPLLIGFLVLCGLALCVFTDFELDAICGALGFAVFSVALIQLWERSGISKHFVW 180

Query: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSPKRKSLRRKLKG 222
           GFGLFGILIALGLRRSEVQ+W GKLG Y PK KSLRRK+KG
Sbjct: 181 GFGLFGILIALGLRRSEVQKWAGKLGFYRPKIKSLRRKIKG 221

[Close]

BLAST of CsGy2G003890 vs. TAIR10
Match: AT5G27440.1 (unknown protein)

HSP 1 Score: 85.1 bits (209), Expect = 6.0e-17
Identity = 54/148 (36.49%), Postives = 84/148 (56.76%), Query Frame = 0


Query: 28  ITPPKSLFISTIVAVSDGL----QPQTLTICARKKKRSPGFQRSTKLVFELASLLASNLK 87
           + P KSL +S+I  VS  +    Q Q+L +CA+K+K+  G++R T+ +F   SLLA NL+
Sbjct: 16  LNPQKSLRLSSISRVSSSISHRTQFQSLVLCAKKRKQRVGYRRITRFLFNSLSLLAPNLQ 75

Query: 88  ILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGD-YDGWRGKRKKTPLLIGFLIVC---GL 147
           ILP PLDLV+A+L G DG                +DGWR K+ K P+L+   ++    G 
Sbjct: 76  ILPQPLDLVIADLGGVDGGXXXXXXXXXXXXXXRFDGWRRKKNKVPILVFVCVILWIYGF 135

Query: 148 VLLFVTDFEINVVCGVLGFAVFGVALIQ 168
             +   + +  +V  VLG  +FGV +++
Sbjct: 136 CKISGIEIKSELVLKVLGLCLFGVTVVK 163

[Close]

BLAST of CsGy2G003890 vs. TrEMBL
Match: tr|A0A0A0LFR0|A0A0A0LFR0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021610 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 7.3e-118
Identity = 224/225 (99.56%), Postives = 224/225 (99.56%), Query Frame = 0


Query: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60
           MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR
Sbjct: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60

Query: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120
           SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW
Sbjct: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120

Query: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180
           RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL
Sbjct: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180

Query: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSPKRKSLRRKLKGRRIF 226
           GFGLFGILIALGLRRSEVQRWVGKLGIYS KRKSLRRKLKGRRIF
Sbjct: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSSKRKSLRRKLKGRRIF 225

[Close]

BLAST of CsGy2G003890 vs. TrEMBL
Match: tr|A0A1S3C0R6|A0A1S3C0R6_CUCME (uncharacterized protein LOC103495165 OS=Cucumis melo OX=3656 GN=LOC103495165 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 1.2e-109
Identity = 208/225 (92.44%), Postives = 214/225 (95.11%), Query Frame = 0


Query: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60
           M TT IASSS+CSIFFNPLLNFTLSNPITPPKS FIST+VAVSDGLQPQTLTICARKKKR
Sbjct: 1   MHTTAIASSSSCSIFFNPLLNFTLSNPITPPKSPFISTLVAVSDGLQPQTLTICARKKKR 60

Query: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120
           SPGFQRSTKLV ELASLLASN+KILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW
Sbjct: 61  SPGFQRSTKLVLELASLLASNIKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120

Query: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180
           RGKRKKTPL IGFL+VCGLVLLFVTDFEIN VCG+LGFAVF VALIQLWQKIGISK FVL
Sbjct: 121 RGKRKKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWQKIGISKHFVL 180

Query: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSPKRKSLRRKLKGRRIF 226
           GFGLFGILIALGLRRSEVQ+WV KLG YSPK KSLRRKLKGRRIF
Sbjct: 181 GFGLFGILIALGLRRSEVQKWVRKLGFYSPKMKSLRRKLKGRRIF 225

[Close]

BLAST of CsGy2G003890 vs. TrEMBL
Match: tr|Q84KA4|Q84KA4_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.1e-108
Identity = 207/225 (92.00%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60
           M TT IASSS+CSIFFNPLLNFTLSNPITPPKS FIST+VAVSDGLQPQTLTICARKKKR
Sbjct: 1   MHTTAIASSSSCSIFFNPLLNFTLSNPITPPKSPFISTLVAVSDGLQPQTLTICARKKKR 60

Query: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120
           SPGFQRSTKLV ELASLLASN+KILPPPLDLVVAELSGGDGNGGGSRLWRGFG GDYDGW
Sbjct: 61  SPGFQRSTKLVLELASLLASNIKILPPPLDLVVAELSGGDGNGGGSRLWRGFGEGDYDGW 120

Query: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180
           RGKRKKTPL IGFL+VCGLVLLFVTDFEIN VCG+LGFAVF VALIQLWQKIGISK FVL
Sbjct: 121 RGKRKKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWQKIGISKHFVL 180

Query: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSPKRKSLRRKLKGRRIF 226
           GFGLFGILIALGLRRSEVQ+WV KLG YSPK KSLRRKLKGRRIF
Sbjct: 181 GFGLFGILIALGLRRSEVQKWVRKLGFYSPKMKSLRRKLKGRRIF 225

[Close]

BLAST of CsGy2G003890 vs. TrEMBL
Match: tr|Q6GX33|Q6GX33_CUCME (Ctp (Fragment) OS=Cucumis melo OX=3656 GN=Ctp PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 8.5e-34
Identity = 77/89 (86.52%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 125 KKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVLGFGL 184
           KKTPL IGFL+VCGLVLLFVTDFEIN VCG+LGFAVF VALIQLW+KIGISK FVLGFGL
Sbjct: 1   KKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWRKIGISKHFVLGFGL 60

Query: 185 FGILIALGLRRSEVQRWVGKLGIYSPKRK 214
           FGILIALGL RSEVQ+WV KLG YSPK K
Sbjct: 61  FGILIALGLGRSEVQKWVRKLGFYSPKMK 89

[Close]

BLAST of CsGy2G003890 vs. TrEMBL
Match: tr|W9RSC8|W9RSC8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002442 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 3.0e-31
Identity = 88/215 (40.93%), Postives = 130/215 (60.47%), Query Frame = 0


Query: 16  FNPLLNFTLSNPIT--PPKSLFISTIVAVSDGLQPQTLTICARKKKRSPGFQRSTKLVFE 75
           FN +   T+S  I+  P KS    + ++ +  +  Q   ICARK+++     +ST+ +  
Sbjct: 20  FNTIAERTVSLQISPFPRKSPDFGSFLSNAPQIYLQNPIICARKRRKRINSDKSTRFLIN 79

Query: 76  LASLLASNLKILPPPLDLVVAELSGGDGNGGGS---RLWRGFGGGDYDGWRGKRKKTPL- 135
           L S++AS+LKILP PLDLV+ E+ GGDG  GG      W+GFG G +DGWR +R+K  L 
Sbjct: 80  LISVVASSLKILPQPLDLVLEEIGGGDGTAGGCGGLGFWKGFGWGGFDGWRKRRRKRNLW 139

Query: 136 LIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVLGFGLFGILI 195
           L GF+ +CGL LLF  + E N     LG   FGVALIQ W+K G  + +VLG  L+  L+
Sbjct: 140 LYGFIAICGLGLLFGREIESNAFWWGLGLGPFGVALIQWWEKTGGVQAWVLGLCLWSFLV 199

Query: 196 ALGLRRSEVQRWVGKLGIYSPKRKSLRRKL-KGRR 224
            L  RR E+Q+W+ +  +  P   ++RR++ +G+R
Sbjct: 200 GLTFRREELQKWLARFRVTIPLVDTVRRRMRRGKR 234

The following BLAST results are available for this feature:

BLAST of CsGy2G003890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139360.1	1.1e-117	99.56	PREDICTED: uncharacterized protein LOC101213268 [Cucumis sativus] >KGN60890.1 hy...	[more]
XP_008454859.1	1.9e-109	92.44	PREDICTED: uncharacterized protein LOC103495165 [Cucumis melo]	[more]
AAO45758.1	1.6e-108	92.00	hypothetical protein [Cucumis melo subsp. melo]	[more]
XP_022999121.1	2.2e-89	78.28	uncharacterized protein LOC111493602 isoform X1 [Cucurbita maxima]	[more]
XP_022999122.1	2.2e-89	78.28	uncharacterized protein LOC111493602 isoform X2 [Cucurbita maxima]	[more]

BLAST of CsGy2G003890 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G27440.1	6.0e-17	36.49	unknown protein	[more]

BLAST of CsGy2G003890 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy2G003890 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LFR0\|A0A0A0LFR0_CUCSA	7.3e-118	99.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021610 PE=4 SV=1	[more]
tr\|A0A1S3C0R6\|A0A1S3C0R6_CUCME	1.2e-109	92.44	uncharacterized protein LOC103495165 OS=Cucumis melo OX=3656 GN=LOC103495165 PE=...	[more]
tr\|Q84KA4\|Q84KA4_CUCME	1.1e-108	92.00	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|Q6GX33\|Q6GX33_CUCME	8.5e-34	86.52	Ctp (Fragment) OS=Cucumis melo OX=3656 GN=Ctp PE=2 SV=1	[more]
tr\|W9RSC8\|W9RSC8_9ROSA	3.0e-31	40.93	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002442 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G003890.1	CsGy2G003890.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G003890	Cla019878	Watermelon (97103) v1	cgybwmB140
CsGy2G003890	Csa2G021610	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G003890	MELO3C004280	Melon (DHL92) v3.5.1	cgybmeB120
CsGy2G003890	ClCG02G015920	Watermelon (Charleston Gray)	cgybwcgB119
CsGy2G003890	CSPI02G03800	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G003890	CmoCh05G011600	Cucurbita moschata (Rifu)	cgybcmoB243
CsGy2G003890	MELO3C004280.2	Melon (DHL92) v3.6.1	cgybmedB118
CsGy2G003890	Cla97C02G041690	Watermelon (97103) v2	cgybwmbB114
CsGy2G003890	Bhi05G001655	Wax gourd	cgybwgoB145
CsGy2G003890	Carg12893	Silver-seed gourd	carcgybB0890

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G003890	Cucurbita pepo (Zucchini)	cgybcpeB168
CsGy2G003890	Cucurbita maxima (Rimu)	cgybcmaB178
CsGy2G003890	Cucurbita maxima (Rimu)	cgybcmaB257
CsGy2G003890	Cucurbita moschata (Rifu)	cgybcmoB170
CsGy2G003890	Cucurbita pepo (Zucchini)	cgybcpeB271
CsGy2G003890	Bottle gourd (USVL1VR-Ls)	cgyblsiB089
CsGy2G003890	Silver-seed gourd	carcgybB0713
CsGy2G003890	Cucumber (Chinese Long) v3	cgybcucB064