Carg12893 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12893
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transmembrane protein
Location	Cucurbita_argyrosperma_scaffold_043 : 1020477 .. 1021154 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGACCACAGCCATAGCTCCTTCTTCACATCCCTCCATTTTCTTCAACCCACTTCTCAATTTCACCATTTCAAATCCCCTAATCCCCTCCAACTCGACATTTCTCTCGACCCTTGTTGCAGTTTCCGATGGATTTCGGGCTCAAACGTCGATCATTTGCGCCAGGAAGAAGAGGAGGAGACCCGTGTTTCTGAGATCGACCAAAATAGTGCTTGAATTGGCGTCTCTCTTAGCCTCCAATCTTAAGATCTTACCGCCGCCTCTGGATTTGGTCGTTGCGGAATTGAGCGGCGGAAATGGGAATGGAGGCGGTTCGCGGTTGTGGAGGAGATTTGGTGGAGGCGGCTATGATGGATGGAGAGGTAAGAGGAAGAAAACCCCATTGTTGATTGGGTTTTTGATTCTTTGTGGTCTTGCTTTGTGCGTTTTCACTGATTTTGAGCTCGATGCGATTTGTGGAGCTCTTGGATTTGCTCTATTTAGCGTTGCATTAATTCAATTGTGGCAGAGAAGTGGGATTTCGAAACATTTCGTTTGGGGATTTGGCCTTTTCGGCATTCTGATTGCCTTGGGATTGAGAAGATCTGAGGTGCAAAAATGGGCTGGAAAATTAGGGTTTTACCGTCCAAAGATGAAGAGTTTGAGAAGAAAAATTGAAGGTAAGAAAATCTTCTGA

mRNA sequence

ATGCAGACCACAGCCATAGCTCCTTCTTCACATCCCTCCATTTTCTTCAACCCACTTCTCAATTTCACCATTTCAAATCCCCTAATCCCCTCCAACTCGACATTTCTCTCGACCCTTGTTGCAGTTTCCGATGGATTTCGGGCTCAAACGTCGATCATTTGCGCCAGGAAGAAGAGGAGGAGACCCGTGTTTCTGAGATCGACCAAAATAGTGCTTGAATTGGCGTCTCTCTTAGCCTCCAATCTTAAGATCTTACCGCCGCCTCTGGATTTGGTCGTTGCGGAATTGAGCGGCGGAAATGGGAATGGAGGCGGTTCGCGGTTGTGGAGGAGATTTGGTGGAGGCGGCTATGATGGATGGAGAGGTAAGAGGAAGAAAACCCCATTGTTGATTGGGTTTTTGATTCTTTGTGGTCTTGCTTTGTGCGTTTTCACTGATTTTGAGCTCGATGCGATTTGTGGAGCTCTTGGATTTGCTCTATTTAGCGTTGCATTAATTCAATTGTGGCAGAGAAGTGGGATTTCGAAACATTTCGTTTGGGGATTTGGCCTTTTCGGCATTCTGATTGCCTTGGGATTGAGAAGATCTGAGGTGCAAAAATGGGCTGGAAAATTAGGGTTTTACCGTCCAAAGATGAAGAGTTTGAGAAGAAAAATTGAAGGTAAGAAAATCTTCTGA

Coding sequence (CDS)

ATGCAGACCACAGCCATAGCTCCTTCTTCACATCCCTCCATTTTCTTCAACCCACTTCTCAATTTCACCATTTCAAATCCCCTAATCCCCTCCAACTCGACATTTCTCTCGACCCTTGTTGCAGTTTCCGATGGATTTCGGGCTCAAACGTCGATCATTTGCGCCAGGAAGAAGAGGAGGAGACCCGTGTTTCTGAGATCGACCAAAATAGTGCTTGAATTGGCGTCTCTCTTAGCCTCCAATCTTAAGATCTTACCGCCGCCTCTGGATTTGGTCGTTGCGGAATTGAGCGGCGGAAATGGGAATGGAGGCGGTTCGCGGTTGTGGAGGAGATTTGGTGGAGGCGGCTATGATGGATGGAGAGGTAAGAGGAAGAAAACCCCATTGTTGATTGGGTTTTTGATTCTTTGTGGTCTTGCTTTGTGCGTTTTCACTGATTTTGAGCTCGATGCGATTTGTGGAGCTCTTGGATTTGCTCTATTTAGCGTTGCATTAATTCAATTGTGGCAGAGAAGTGGGATTTCGAAACATTTCGTTTGGGGATTTGGCCTTTTCGGCATTCTGATTGCCTTGGGATTGAGAAGATCTGAGGTGCAAAAATGGGCTGGAAAATTAGGGTTTTACCGTCCAAAGATGAAGAGTTTGAGAAGAAAAATTGAAGGTAAGAAAATCTTCTGA

Protein sequence

MQTTAIAPSSHPSIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRRRPVFLRSTKIVLELASLLASNLKILPPPLDLVVAELSGGNGNGGGSRLWRRFGGGGYDGWRGKRKKTPLLIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVWGFGLFGILIALGLRRSEVQKWAGKLGFYRPKMKSLRRKIEGKKIF

Homology

[Close]

BLAST of Carg12893 vs. NCBI nr
Match: XP_022946763.1 (uncharacterized protein LOC111450736 isoform X1 [Cucurbita moschata])

HSP 1 Score: 433.3 bits (1113), Expect = 4.9e-118
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MQTTAIAPSSHPSIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR 60
           MQTTAIAPSSHPSIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR
Sbjct: 1   MQTTAIAPSSHPSIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR 60

Query: 61  RPVFLRSTKIVLELASLLASNLKILPPPLDLVVAELSGGNGNGGGSRLWRRFGGGGYDGW 120
           RPVFLRSTK+VLELASLLASNLKILPPPLDLVVAELSGGNGNGGGSRLWRRFGGGGYDGW
Sbjct: 61  RPVFLRSTKLVLELASLLASNLKILPPPLDLVVAELSGGNGNGGGSRLWRRFGGGGYDGW 120

Query: 121 RGKRKKTPLLIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVW 180
           RGKRKKTPLLIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVW
Sbjct: 121 RGKRKKTPLLIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVW 180

Query: 181 GFGLFGILIALGLRRSEVQKWAGKLGFYRPKMKSLRRKIEG 222
           GFGLFGILIALGLRRSEVQKWAGKLGFYRPKMKSLRRKIEG
Sbjct: 181 GFGLFGILIALGLRRSEVQKWAGKLGFYRPKMKSLRRKIEG 221

[Close]

BLAST of Carg12893 vs. NCBI nr
Match: XP_023545829.1 (uncharacterized protein LOC111805147 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422.5 bits (1085), Expect = 8.7e-115
Identity = 214/221 (96.83%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MQTTAIAPSSHPSIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR 60
           MQTTAIAPSS+PSIFFNPLLNFTISNPLIPSNS FLSTLVAVSDGFRAQTSI+CARKKRR
Sbjct: 1   MQTTAIAPSSNPSIFFNPLLNFTISNPLIPSNSPFLSTLVAVSDGFRAQTSIVCARKKRR 60

Query: 61  RPVFLRSTKIVLELASLLASNLKILPPPLDLVVAELSGGNGNGGGSRLWRRFGGGGYDGW 120
           RPVFLRSTK+VLELASL ASNLKILPPPLDLVVAELSGGNGNGGGSRLWR FGGGGYDGW
Sbjct: 61  RPVFLRSTKLVLELASLFASNLKILPPPLDLVVAELSGGNGNGGGSRLWRSFGGGGYDGW 120

Query: 121 RGKRKKTPLLIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVW 180
           RGKRKKTPLLIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVW
Sbjct: 121 RGKRKKTPLLIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVW 180

Query: 181 GFGLFGILIALGLRRSEVQKWAGKLGFYRPKMKSLRRKIEG 222
           GFGLFGILIALGLRRSEVQKWAGKLGFYRPK+KSLRRKIEG
Sbjct: 181 GFGLFGILIALGLRRSEVQKWAGKLGFYRPKIKSLRRKIEG 221

[Close]

BLAST of Carg12893 vs. NCBI nr
Match: XP_022999122.1 (uncharacterized protein LOC111493602 isoform X2 [Cucurbita maxima])

HSP 1 Score: 421.0 bits (1081), Expect = 2.5e-114
Identity = 212/221 (95.93%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MQTTAIAPSSHPSIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR 60
           MQTTAIAPSSH SIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR
Sbjct: 1   MQTTAIAPSSHASIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR 60

Query: 61  RPVFLRSTKIVLELASLLASNLKILPPPLDLVVAELSGGNGNGGGSRLWRRFGGGGYDGW 120
           RPVFLRSTK+VLELASL ASNLKILPPPLDLVVAELSGG+GNGGGSRLWRRFGGGGYDGW
Sbjct: 61  RPVFLRSTKLVLELASLFASNLKILPPPLDLVVAELSGGDGNGGGSRLWRRFGGGGYDGW 120

Query: 121 RGKRKKTPLLIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVW 180
           RGKRKKTPLLIGFL+LCGLALCVFTDFELDAICGALGFA+FSVALIQLW+RSGISKHFVW
Sbjct: 121 RGKRKKTPLLIGFLVLCGLALCVFTDFELDAICGALGFAVFSVALIQLWERSGISKHFVW 180

Query: 181 GFGLFGILIALGLRRSEVQKWAGKLGFYRPKMKSLRRKIEG 222
           GFGLFGILIALGLRRSEVQKWAGKLGFYRPK+KSLRRKI+G
Sbjct: 181 GFGLFGILIALGLRRSEVQKWAGKLGFYRPKIKSLRRKIKG 221

[Close]

BLAST of Carg12893 vs. NCBI nr
Match: XP_022999121.1 (uncharacterized protein LOC111493602 isoform X1 [Cucurbita maxima])

HSP 1 Score: 420.6 bits (1080), Expect = 3.3e-114
Identity = 212/223 (95.07%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 1   MQTTAIAPSSHPSIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR 60
           MQTTAIAPSSH SIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR
Sbjct: 1   MQTTAIAPSSHASIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR 60

Query: 61  RPVFLRSTKIVLELASLLASNLKILPPPLDLVVAELSGGNGNGGGSRLWRRFGGGGYDGW 120
           RPVFLRSTK+VLELASL ASNLKILPPPLDLVVAELSGG+GNGGGSRLWRRFGGGGYDGW
Sbjct: 61  RPVFLRSTKLVLELASLFASNLKILPPPLDLVVAELSGGDGNGGGSRLWRRFGGGGYDGW 120

Query: 121 RGKRKKTPLLIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVW 180
           RGKRKKTPLLIGFL+LCGLALCVFTDFELDAICGALGFA+FSVALIQLW+RSGISKHFVW
Sbjct: 121 RGKRKKTPLLIGFLVLCGLALCVFTDFELDAICGALGFAVFSVALIQLWERSGISKHFVW 180

Query: 181 GFGLFGILIALGLRRSEVQKWAGKLGFYRPKMKSLRRKIEGKK 224
           GFGLFGILIALGLRRSEVQKWAGKLGFYRPK+KSLRRKI+G +
Sbjct: 181 GFGLFGILIALGLRRSEVQKWAGKLGFYRPKIKSLRRKIKGSE 223

[Close]

BLAST of Carg12893 vs. NCBI nr
Match: XP_022946764.1 (uncharacterized protein LOC111450736 isoform X2 [Cucurbita moschata])

HSP 1 Score: 356.7 bits (914), Expect = 5.9e-95
Identity = 191/225 (84.89%), Postives = 192/225 (85.33%), Query Frame = 0


Query: 1   MQTTAIAPSSHPSIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR 60
           MQTTAIAPSSHPSIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR
Sbjct: 1   MQTTAIAPSSHPSIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR 60

Query: 61  RPVFLRSTKIVLELASLLASNLKILPPPLDLVVAELSGGNGNGGGSRLWRRFGGGGYDGW 120
           RPVFLRSTK+VLELASLLASNLKILPPPLDLVVAELSGGNGNGGGSRLWRRFGGGGYDGW
Sbjct: 61  RPVFLRSTKLVLELASLLASNLKILPPPLDLVVAELSGGNGNGGGSRLWRRFGGGGYDGW 120

Query: 121 RGKRKKTPLLIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVW 180
           R                                 ALGFALFSVALIQLWQRSGISKHFVW
Sbjct: 121 R---------------------------------ALGFALFSVALIQLWQRSGISKHFVW 180

Query: 181 GFGLFGILIALGLRRSEVQKWAGKLGFYRPKMKSLRRKIEGKKIF 226
           GFGLFGILIALGLRRSEVQKWAGKLGFYRPKMKSLRRKIEGKKIF
Sbjct: 181 GFGLFGILIALGLRRSEVQKWAGKLGFYRPKMKSLRRKIEGKKIF 192

[Close]

BLAST of Carg12893 vs. TAIR10
Match: AT5G27440.1 (unknown protein)

HSP 1 Score: 73.9 bits (180), Expect = 1.4e-13
Identity = 54/186 (29.03%), Postives = 94/186 (50.54%), Query Frame = 0


Query: 28  LIPSNSTFLSTLVAVSDGF----RAQTSIICARKKRRRPVFLRSTKIVLELASLLASNLK 87
           L P  S  LS++  VS       + Q+ ++CA+K+++R  + R T+ +    SLLA NL+
Sbjct: 16  LNPQKSLRLSSISRVSSSISHRTQFQSLVLCAKKRKQRVGYRRITRFLFNSLSLLAPNLQ 75

Query: 88  ILPPPLDLVVAELSGGNGNGGGSRLWRRFGGGG-YDGWRGKRKKTPLLIGFLILCGL-AL 147
           ILP PLDLV+A+L G +G                +DGWR K+ K P+L+   ++  +   
Sbjct: 76  ILPQPLDLVIADLGGVDGGXXXXXXXXXXXXXXRFDGWRRKKNKVPILVFVCVILWIYGF 135

Query: 148 CVFTDFEL--DAICGALGFALFSVALIQLWQRSGISKHFVWGFGLFGILIALGLRRSEVQ 206
           C  +  E+  + +   LG  LF V +++  +R   ++  V+GF      +  G ++    
Sbjct: 136 CKISGIEIKSELVLKVLGLCLFGVTVVKELKRE--ARFLVFGFLCVVASLVFGYKKENFV 195

[Close]

BLAST of Carg12893 vs. TrEMBL
Match: tr|A0A1S3C0R6|A0A1S3C0R6_CUCME (uncharacterized protein LOC103495165 OS=Cucumis melo OX=3656 GN=LOC103495165 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 8.1e-93
Identity = 177/225 (78.67%), Postives = 196/225 (87.11%), Query Frame = 0


Query: 1   MQTTAIAPSSHPSIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR 60
           M TTAIA SS  SIFFNPLLNFT+SNP+ P  S F+STLVAVSDG + QT  ICARKK+R
Sbjct: 1   MHTTAIASSSSCSIFFNPLLNFTLSNPITPPKSPFISTLVAVSDGLQPQTLTICARKKKR 60

Query: 61  RPVFLRSTKIVLELASLLASNLKILPPPLDLVVAELSGGNGNGGGSRLWRRFGGGGYDGW 120
            P F RSTK+VLELASLLASN+KILPPPLDLVVAELSGG+GNGGGSRLWR FGGG YDGW
Sbjct: 61  SPGFQRSTKLVLELASLLASNIKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120

Query: 121 RGKRKKTPLLIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVW 180
           RGKRKKTPL IGFL++CGL L   TDFE++ +CG LGFA+FSVALIQLWQ+ GISKHFV 
Sbjct: 121 RGKRKKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWQKIGISKHFVL 180

Query: 181 GFGLFGILIALGLRRSEVQKWAGKLGFYRPKMKSLRRKIEGKKIF 226
           GFGLFGILIALGLRRSEVQKW  KLGFY PKMKSLRRK++G++IF
Sbjct: 181 GFGLFGILIALGLRRSEVQKWVRKLGFYSPKMKSLRRKLKGRRIF 225

[Close]

BLAST of Carg12893 vs. TrEMBL
Match: tr|Q84KA4|Q84KA4_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 6.8e-92
Identity = 176/225 (78.22%), Postives = 195/225 (86.67%), Query Frame = 0


Query: 1   MQTTAIAPSSHPSIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR 60
           M TTAIA SS  SIFFNPLLNFT+SNP+ P  S F+STLVAVSDG + QT  ICARKK+R
Sbjct: 1   MHTTAIASSSSCSIFFNPLLNFTLSNPITPPKSPFISTLVAVSDGLQPQTLTICARKKKR 60

Query: 61  RPVFLRSTKIVLELASLLASNLKILPPPLDLVVAELSGGNGNGGGSRLWRRFGGGGYDGW 120
            P F RSTK+VLELASLLASN+KILPPPLDLVVAELSGG+GNGGGSRLWR FG G YDGW
Sbjct: 61  SPGFQRSTKLVLELASLLASNIKILPPPLDLVVAELSGGDGNGGGSRLWRGFGEGDYDGW 120

Query: 121 RGKRKKTPLLIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVW 180
           RGKRKKTPL IGFL++CGL L   TDFE++ +CG LGFA+FSVALIQLWQ+ GISKHFV 
Sbjct: 121 RGKRKKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWQKIGISKHFVL 180

Query: 181 GFGLFGILIALGLRRSEVQKWAGKLGFYRPKMKSLRRKIEGKKIF 226
           GFGLFGILIALGLRRSEVQKW  KLGFY PKMKSLRRK++G++IF
Sbjct: 181 GFGLFGILIALGLRRSEVQKWVRKLGFYSPKMKSLRRKLKGRRIF 225

[Close]

BLAST of Carg12893 vs. TrEMBL
Match: tr|A0A0A0LFR0|A0A0A0LFR0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021610 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.8e-90
Identity = 173/225 (76.89%), Postives = 192/225 (85.33%), Query Frame = 0


Query: 1   MQTTAIAPSSHPSIFFNPLLNFTISNPLIPSNSTFLSTLVAVSDGFRAQTSIICARKKRR 60
           MQTT IA SS  SIFFNPLLNFT+SNP+ P  S F+ST+VAVSDG + QT  ICARKK+R
Sbjct: 1   MQTTTIASSSTCSIFFNPLLNFTLSNPITPPKSLFISTIVAVSDGLQPQTLTICARKKKR 60

Query: 61  RPVFLRSTKIVLELASLLASNLKILPPPLDLVVAELSGGNGNGGGSRLWRRFGGGGYDGW 120
            P F RSTK+V ELASLLASNLKILPPPLDLVVAELSGG+GNGGGSRLWR FGGG YDGW
Sbjct: 61  SPGFQRSTKLVFELASLLASNLKILPPPLDLVVAELSGGDGNGGGSRLWRGFGGGDYDGW 120

Query: 121 RGKRKKTPLLIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVW 180
           RGKRKKTPLLIGFLI+CGL L   TDFE++ +CG LGFA+F VALIQLWQ+ GISK FV 
Sbjct: 121 RGKRKKTPLLIGFLIVCGLVLLFVTDFEINVVCGVLGFAVFGVALIQLWQKIGISKDFVL 180

Query: 181 GFGLFGILIALGLRRSEVQKWAGKLGFYRPKMKSLRRKIEGKKIF 226
           GFGLFGILIALGLRRSEVQ+W GKLG Y  K KSLRRK++G++IF
Sbjct: 181 GFGLFGILIALGLRRSEVQRWVGKLGIYSSKRKSLRRKLKGRRIF 225

[Close]

BLAST of Carg12893 vs. TrEMBL
Match: tr|Q6GX33|Q6GX33_CUCME (Ctp (Fragment) OS=Cucumis melo OX=3656 GN=Ctp PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.1e-30
Identity = 68/89 (76.40%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 125 KKTPLLIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVWGFGL 184
           KKTPL IGFL++CGL L   TDFE++ +CG LGFA+FSVALIQLW++ GISKHFV GFGL
Sbjct: 1   KKTPLFIGFLMVCGLVLLFVTDFEINEVCGILGFAVFSVALIQLWRKIGISKHFVLGFGL 60

Query: 185 FGILIALGLRRSEVQKWAGKLGFYRPKMK 214
           FGILIALGL RSEVQKW  KLGFY PKMK
Sbjct: 61  FGILIALGLGRSEVQKWVRKLGFYSPKMK 89

[Close]

BLAST of Carg12893 vs. TrEMBL
Match: tr|W9RSC8|W9RSC8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002442 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.8e-29
Identity = 85/220 (38.64%), Postives = 127/220 (57.73%), Query Frame = 0


Query: 10  SHPSIFFNPLLNFTISNPL--IPSNSTFLSTLVAVSDGFRAQTSIICARKKRRRPVFLRS 69
           S+ S  FN +   T+S  +   P  S    + ++ +     Q  IICARK+R+R    +S
Sbjct: 14  SYNSRRFNTIAERTVSLQISPFPRKSPDFGSFLSNAPQIYLQNPIICARKRRKRINSDKS 73

Query: 70  TKIVLELASLLASNLKILPPPLDLVVAELSGGNGNGGGS---RLWRRFGGGGYDGWRGKR 129
           T+ ++ L S++AS+LKILP PLDLV+ E+ GG+G  GG      W+ FG GG+DGWR +R
Sbjct: 74  TRFLINLISVVASSLKILPQPLDLVLEEIGGGDGTAGGCGGLGFWKGFGWGGFDGWRKRR 133

Query: 130 KKTPL-LIGFLILCGLALCVFTDFELDAICGALGFALFSVALIQLWQRSGISKHFVWGFG 189
           +K  L L GF+ +CGL L    + E +A    LG   F VALIQ W+++G  + +V G  
Sbjct: 134 RKRNLWLYGFIAICGLGLLFGREIESNAFWWGLGLGPFGVALIQWWEKTGGVQAWVLGLC 193

Query: 190 LFGILIALGLRRSEVQKWAGKLGFYRPKMKSLRRKIEGKK 224
           L+  L+ L  RR E+QKW  +     P + ++RR++   K
Sbjct: 194 LWSFLVGLTFRREELQKWLARFRVTIPLVDTVRRRMRRGK 233

The following BLAST results are available for this feature:

BLAST of Carg12893 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946763.1	4.9e-118	99.55	uncharacterized protein LOC111450736 isoform X1 [Cucurbita moschata]	[more]
XP_023545829.1	8.7e-115	96.83	uncharacterized protein LOC111805147 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022999122.1	2.5e-114	95.93	uncharacterized protein LOC111493602 isoform X2 [Cucurbita maxima]	[more]
XP_022999121.1	3.3e-114	95.07	uncharacterized protein LOC111493602 isoform X1 [Cucurbita maxima]	[more]
XP_022946764.1	5.9e-95	84.89	uncharacterized protein LOC111450736 isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg12893 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G27440.1	1.4e-13	29.03	unknown protein	[more]

BLAST of Carg12893 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg12893 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C0R6\|A0A1S3C0R6_CUCME	8.1e-93	78.67	uncharacterized protein LOC103495165 OS=Cucumis melo OX=3656 GN=LOC103495165 PE=...	[more]
tr\|Q84KA4\|Q84KA4_CUCME	6.8e-92	78.22	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A0A0LFR0\|A0A0A0LFR0_CUCSA	3.8e-90	76.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021610 PE=4 SV=1	[more]
tr\|Q6GX33\|Q6GX33_CUCME	1.1e-30	76.40	Ctp (Fragment) OS=Cucumis melo OX=3656 GN=Ctp PE=2 SV=1	[more]
tr\|W9RSC8\|W9RSC8_9ROSA	4.8e-29	38.64	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002442 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12893-RA	Carg12893-RA	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12893	Cla019878	Watermelon (97103) v1	carwmB0907
Carg12893	Csa2G021610	Cucumber (Chinese Long) v2	carcuB0917
Carg12893	MELO3C004280	Melon (DHL92) v3.5.1	carmeB0893
Carg12893	ClCG02G015920	Watermelon (Charleston Gray)	carwcgB0883
Carg12893	CSPI02G03800	Wild cucumber (PI 183967)	carcpiB0938
Carg12893	CmoCh05G011600	Cucurbita moschata (Rifu)	carcmoB1216
Carg12893	CsGy2G003890	Cucumber (Gy14) v2	carcgybB0890
Carg12893	MELO3C004280.2	Melon (DHL92) v3.6.1	carmedB0900
Carg12893	Cla97C02G041690	Watermelon (97103) v2	carwmbB0946
Carg12893	Bhi05G001655	Wax gourd	carwgoB1046

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12893	Silver-seed gourd	carcarB587
Carg12893	Cucumber (Gy14) v1	carcgyB1020
Carg12893	Cucurbita maxima (Rimu)	carcmaB1241
Carg12893	Cucurbita maxima (Rimu)	carcmaB1246
Carg12893	Cucurbita moschata (Rifu)	carcmoB1212
Carg12893	Cucurbita pepo (Zucchini)	carcpeB1252
Carg12893	Cucurbita pepo (Zucchini)	carcpeB1256
Carg12893	Cucumber (Chinese Long) v3	carcucB0940
Carg12893	Bottle gourd (USVL1VR-Ls)	carlsiB822
Carg12893	Watermelon (97103) v2	carwmbB0949