Cla019302 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla019302
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Mitochondrial import inner membrane translocase subunit Tim8 (AHRD V1 **** B6SQH6_MAIZE); contains Interpro domain(s) IPR004217 Mitochondrial inner membrane translocase complex, Tim8/9/10/13-zinc finger-like
Location	Chr6 : 26789126 .. 26790405 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCTCGTCTCTTAATTCCCCGGAGCTTATGAATTTTATCAATGTGAGTTCATTTTCCGTTGTTTTTAATTGTCACTTCTAGGCTCTGATTCGTGTGGGATCGAACGTTAAATCAAATGTCGAATCATTTCACTATATAAAAAAAAATGTCCGACTTCTAATTTCCTTTCCCATGAATATGCTATTGGGTGTCTTTTTATCGGCTTTATGCACCTCCTGTTTAATTCGTATATCCGAGGACGGTGAAACTGATATCATTCTTGGCAACTCTGCTATTTAGGAGCAATGAGCAGAGTCCTTGAAACAGAGGTTTATATTGACCCAGTCTAAAGACAAGTCTTAAGAAATGCTTTGATGTCATCACAACTCATTACTCAGGGGAGATTACATTCTTGAAATTAGCATATTATATCCCACAGATTTGAGTTTGTCTCTAAATCTGAAATGAATTAAATGTGCTCCCCATCTTTCTGCAACTGAGTATAGGAGAAATACATTTTGATTACATTTTATATCAAAGAATTTGAACAGTAGGTTGTAGAAGCAACTTCCCGAGCCTTGAAGGTGTAAATTTGGTTTGAAGATTTTAGAGATGTCATATGATGAGTGTACTGCTGTGTGGAATATCAGTATGTACAAAGTTGGAAAGAATACATGCTCTGAGTTTGTTCTGTTTCTTTTTCTTGAAAACAGAAAGAAACATTTTTTCCGGATAAACGTATTCAATGAGTTTTATCAGCCATGCAAGTAATAATAGGCTATGGAATTCCATGGGTTCATATCACTTAAAAAGATCGGAGTTTGTCTGAACTTGGGGGTTACAGCTATATGTCTTTTTAAAGAATGATTTAGTTAAAGTAAGATGTTCAATTTTATTTGTCAACCAAGCATAGGTGGCAATTAGTTGACTACTAATTGTGTGTTGCCTACTCTTCAACCACACACCCTCCAGCGTTTTTCATTGCTGGATTTGACCCCTCCTCCCCCTCGAGTGTAGATAGAAGGATGCTTTGTTGTGTGACTTCTATTTGTTACAGTGTGACAAAATTTAATGATGTTGGTAATTTATTTGGTCGTTTTGTTAAACAGGAAGAGAAGCAAAGGGCTATGGTTGCTGAGATGGTGGCTAAGCTTACCAGTGTCTGTTGGGACAAGTGCATCACTGGTACACCTGGGAGTAAGTTCAGCAATAGTGAATCCAACTGTCTATCAAACTGTGCCCAACGCTATATGGATATGAGCATCATCATTATGAAACGATTCCAAAACAGTTAA

mRNA sequence

ATGGATTCCTCGTCTCTTAATTCCCCGGAGCTTATGAATTTTATCAATGAAGAGAAGCAAAGGGCTATGGTTGCTGAGATGGTGGCTAAGCTTACCAGTGTCTGTTGGGACAAGTGCATCACTGGTACACCTGGGAGTAAGTTCAGCAATAGTGAATCCAACTGTCTATCAAACTGTGCCCAACGCTATATGGATATGAGCATCATCATTATGAAACGATTCCAAAACAGTTAA

Coding sequence (CDS)

ATGGATTCCTCGTCTCTTAATTCCCCGGAGCTTATGAATTTTATCAATGAAGAGAAGCAAAGGGCTATGGTTGCTGAGATGGTGGCTAAGCTTACCAGTGTCTGTTGGGACAAGTGCATCACTGGTACACCTGGGAGTAAGTTCAGCAATAGTGAATCCAACTGTCTATCAAACTGTGCCCAACGCTATATGGATATGAGCATCATCATTATGAAACGATTCCAAAACAGTTAA

Protein sequence

MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSNSESNCLSNCAQRYMDMSIIIMKRFQNS

Homology

[Close]

BLAST of Cla019302 vs. Swiss-Prot
Match: TIM8_ARATH (Mitochondrial import inner membrane translocase subunit TIM8 OS=Arabidopsis thaliana GN=TIM8 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.0e-26
Identity = 54/76 (71.05%), Postives = 65/76 (85.53%), Query Frame = 1


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSNSESNCLSNCA 60
          MD S  N+PEL+ F+ +EK+RAMV EMV+K+TSVCWDKCIT  PGSKFS+SES+CL++CA
Sbjct: 1  MDPSMANNPELLQFLAQEKERAMVNEMVSKMTSVCWDKCITSAPGSKFSSSESSCLTHCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          QRYMDMS+IIMKRF +
Sbjct: 61 QRYMDMSMIIMKRFNS 76

[Close]

BLAST of Cla019302 vs. Swiss-Prot
Match: TIM8_CRYNJ (Mitochondrial import inner membrane translocase subunit TIM8 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=TIM8 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.0e-11
Identity = 27/66 (40.91%), Postives = 43/66 (65.15%), Query Frame = 1


Query: 10 ELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSNSESNCLSNCAQRYMDMSII 69
          EL +F+ +E+ +A +   + +LT+ CW+ CITG   SKFS SE+ CL NC  R++D S+ 
Sbjct: 17 ELESFLEQEQAKAKLQASIHELTNTCWNTCITGGISSKFSKSEAQCLENCVDRFLDSSLY 76

Query: 70 IMKRFQ 76
          I+++ +
Sbjct: 77 IVRQIE 82

[Close]

BLAST of Cla019302 vs. Swiss-Prot
Match: TIM8_CRYNB (Mitochondrial import inner membrane translocase subunit TIM8 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=TIM8 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 6.0e-11
Identity = 27/66 (40.91%), Postives = 43/66 (65.15%), Query Frame = 1


Query: 10 ELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSNSESNCLSNCAQRYMDMSII 69
          EL +F+ +E+ +A +   + +LT+ CW+ CITG   SKFS SE+ CL NC  R++D S+ 
Sbjct: 17 ELESFLEQEQAKAKLQASIHELTNTCWNTCITGGISSKFSKSEAQCLENCVDRFLDSSLY 76

Query: 70 IMKRFQ 76
          I+++ +
Sbjct: 77 IVRQIE 82

[Close]

BLAST of Cla019302 vs. Swiss-Prot
Match: TIM8_DROME (Mitochondrial import inner membrane translocase subunit Tim8 OS=Drosophila melanogaster GN=Tim8 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.7e-10
Identity = 29/73 (39.73%), Postives = 43/73 (58.90%), Query Frame = 1


Query: 2  DSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSNSESNCLSNCAQ 61
          ++ S N  EL  F+  EKQ+A V   + +   +CW+KCI G P +K  ++   CLSNC  
Sbjct: 5  ENLSGNDKELQEFLLIEKQKAQVNAQIHEFNEICWEKCI-GKPSTKLDHATETCLSNCVD 64

Query: 62 RYMDMSIIIMKRF 75
          R++D S++I +RF
Sbjct: 65 RFIDTSLLITQRF 76

[Close]

BLAST of Cla019302 vs. Swiss-Prot
Match: TIM8_SCHPO (Mitochondrial import inner membrane translocase subunit tim8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tim8 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 6.6e-10
Identity = 29/73 (39.73%), Postives = 41/73 (56.16%), Query Frame = 1


Query: 2  DSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSNSESNCLSNCAQ 61
          D S     EL  FI  E+Q+  + + + + TS CW KCI G  G+K   SE  CL NC +
Sbjct: 11 DLSESEQLELSKFIESEQQKVKLQQAIHQFTSTCWPKCI-GNIGNKLDKSEEQCLQNCVE 70

Query: 62 RYMDMSIIIMKRF 75
          R++D +  I+KR+
Sbjct: 71 RFLDCNFHIIKRY 82

[Close]

BLAST of Cla019302 vs. TrEMBL
Match: A0A0A0LTY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G001280 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.1e-35
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 1


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSNSESNCLSNCA 60
          MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFS+SESNCLSNCA
Sbjct: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQNS 78
          QRYMDMSIIIMKRFQNS
Sbjct: 61 QRYMDMSIIIMKRFQNS 77

[Close]

BLAST of Cla019302 vs. TrEMBL
Match: M5WBB3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014244mg PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.2e-28
Identity = 60/76 (78.95%), Postives = 71/76 (93.42%), Query Frame = 1


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSNSESNCLSNCA 60
          MD SS+N+PEL+ FIN+EK+RAMV EMV KLT+VCWDKCITGTPGSKFS+SES CL+NCA
Sbjct: 1  MDPSSMNNPELLQFINQEKERAMVNEMVGKLTNVCWDKCITGTPGSKFSSSESACLANCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          +RY+DMS+IIMKRFQN
Sbjct: 61 RRYLDMSMIIMKRFQN 76

[Close]

BLAST of Cla019302 vs. TrEMBL
Match: A0A059CY20_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B00077 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 6.4e-28
Identity = 62/76 (81.58%), Postives = 69/76 (90.79%), Query Frame = 1


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSNSESNCLSNCA 60
          MD+SSLNS EL   I++EK+RAMV EMVAKLTS CWDKCITGTPGSKFS+SES CL+NCA
Sbjct: 1  MDASSLNSAELQRLISQEKERAMVNEMVAKLTSACWDKCITGTPGSKFSSSESTCLANCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          QRYMDMSIIIMKRFQ+
Sbjct: 61 QRYMDMSIIIMKRFQS 76

[Close]

BLAST of Cla019302 vs. TrEMBL
Match: W9RHB0_9ROSA (Mitochondrial import inner membrane translocase subunit Tim8 OS=Morus notabilis GN=L484_008830 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 8.4e-28
Identity = 58/76 (76.32%), Postives = 70/76 (92.11%), Query Frame = 1


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSNSESNCLSNCA 60
          MD S++NSPEL+ FIN+EK+RAM+ EMVAKLT+VCWDKCIT TPGSKFS+SE +CLSNCA
Sbjct: 1  MDPSAINSPELLQFINQEKERAMINEMVAKLTTVCWDKCITSTPGSKFSSSEQSCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          +RY+DMS +IMKRFQN
Sbjct: 61 RRYLDMSALIMKRFQN 76

[Close]

BLAST of Cla019302 vs. TrEMBL
Match: F2VPS7_SOLNI (Mitochondrial import inner membrane translocase subunit OS=Solanum nigrum GN=TIM8 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.1e-27
Identity = 58/76 (76.32%), Postives = 70/76 (92.11%), Query Frame = 1


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSNSESNCLSNCA 60
          MD S+L SPEL NF+N+EK+RA++ EMV KLTS CWDKCITGTPGSKFS+SES+CL+NCA
Sbjct: 1  MDPSALQSPELQNFLNQEKERALINEMVGKLTSSCWDKCITGTPGSKFSSSESSCLTNCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          QRYM+MS+II+KRFQN
Sbjct: 61 QRYMEMSLIIVKRFQN 76

[Close]

BLAST of Cla019302 vs. NCBI nr
Match: gi|659128830|ref|XP_008464391.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM8 [Cucumis melo])

HSP 1 Score: 156.8 bits (395), Expect = 1.6e-35
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 1


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSNSESNCLSNCA 60
          MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFS+SESNCLSNCA
Sbjct: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQNS 78
          QRYMDMSIIIMKRFQNS
Sbjct: 61 QRYMDMSIIIMKRFQNS 77

[Close]

BLAST of Cla019302 vs. NCBI nr
Match: gi|747053860|ref|XP_011073110.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM8 [Sesamum indicum])

HSP 1 Score: 135.6 bits (340), Expect = 3.7e-29
Identity = 61/75 (81.33%), Postives = 69/75 (92.00%), Query Frame = 1


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSNSESNCLSNCA 60
          MD SSLNSPEL  F+N+EK++AMV EM+ KLTS CWDKCITGTPGSKFS+SESNCL+NCA
Sbjct: 1  MDPSSLNSPELQQFLNQEKEKAMVTEMIGKLTSACWDKCITGTPGSKFSSSESNCLTNCA 60

Query: 61 QRYMDMSIIIMKRFQ 76
          QRYMDMS+IIMKRFQ
Sbjct: 61 QRYMDMSLIIMKRFQ 75

[Close]

BLAST of Cla019302 vs. NCBI nr
Match: gi|1009130374|ref|XP_015882265.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM8-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 132.5 bits (332), Expect = 3.2e-28
Identity = 60/76 (78.95%), Postives = 71/76 (93.42%), Query Frame = 1


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSNSESNCLSNCA 60
          MD SSL +PEL+ FIN+EK+RAM+ EMVAKLT+VCWDKCITGTPGSKFS+SE +CLSNCA
Sbjct: 1  MDPSSLENPELVQFINQEKERAMLNEMVAKLTNVCWDKCITGTPGSKFSSSEQSCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          +RY+DMS+IIMKRFQN
Sbjct: 61 RRYLDMSVIIMKRFQN 76

[Close]

BLAST of Cla019302 vs. NCBI nr
Match: gi|595849876|ref|XP_007209810.1| (hypothetical protein PRUPE_ppa014244mg [Prunus persica])

HSP 1 Score: 132.5 bits (332), Expect = 3.2e-28
Identity = 60/76 (78.95%), Postives = 71/76 (93.42%), Query Frame = 1


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSNSESNCLSNCA 60
          MD SS+N+PEL+ FIN+EK+RAMV EMV KLT+VCWDKCITGTPGSKFS+SES CL+NCA
Sbjct: 1  MDPSSMNNPELLQFINQEKERAMVNEMVGKLTNVCWDKCITGTPGSKFSSSESACLANCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          +RY+DMS+IIMKRFQN
Sbjct: 61 RRYLDMSMIIMKRFQN 76

[Close]

BLAST of Cla019302 vs. NCBI nr
Match: gi|694429363|ref|XP_009342209.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM8-like [Pyrus x bretschneideri])

HSP 1 Score: 131.7 bits (330), Expect = 5.4e-28
Identity = 59/76 (77.63%), Postives = 72/76 (94.74%), Query Frame = 1


Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSNSESNCLSNCA 60
          MD S++N+PEL+NFIN+EK+RAMV EMV KLT+VCWDKCITGTPGSKFS+SES CL+NCA
Sbjct: 1  MDPSAMNNPELLNFINQEKERAMVNEMVGKLTNVCWDKCITGTPGSKFSSSESACLANCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          +RY+DMS+IIMKRFQ+
Sbjct: 61 RRYLDMSMIIMKRFQS 76

The following BLAST results are available for this feature:

BLAST of Cla019302 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TIM8_ARATH	1.0e-26	71.05	Mitochondrial import inner membrane translocase subunit TIM8 OS=Arabidopsis thal...	[more]
TIM8_CRYNJ	6.0e-11	40.91	Mitochondrial import inner membrane translocase subunit TIM8 OS=Cryptococcus neo...	[more]
TIM8_CRYNB	6.0e-11	40.91	Mitochondrial import inner membrane translocase subunit TIM8 OS=Cryptococcus neo...	[more]
TIM8_DROME	1.7e-10	39.73	Mitochondrial import inner membrane translocase subunit Tim8 OS=Drosophila melan...	[more]
TIM8_SCHPO	6.6e-10	39.73	Mitochondrial import inner membrane translocase subunit tim8 OS=Schizosaccharomy...	[more]

BLAST of Cla019302 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTY7_CUCSA	1.1e-35	98.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G001280 PE=3 SV=1	[more]
M5WBB3_PRUPE	2.2e-28	78.95	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014244mg PE=3 SV=1	[more]
A0A059CY20_EUCGR	6.4e-28	81.58	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B00077 PE=3 SV=1	[more]
W9RHB0_9ROSA	8.4e-28	76.32	Mitochondrial import inner membrane translocase subunit Tim8 OS=Morus notabilis ...	[more]
F2VPS7_SOLNI	1.1e-27	76.32	Mitochondrial import inner membrane translocase subunit OS=Solanum nigrum GN=TIM...	[more]

BLAST of Cla019302 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128830\|ref\|XP_008464391.1\|	1.6e-35	98.70	PREDICTED: mitochondrial import inner membrane translocase subunit TIM8 [Cucumis...	[more]
gi\|747053860\|ref\|XP_011073110.1\|	3.7e-29	81.33	PREDICTED: mitochondrial import inner membrane translocase subunit TIM8 [Sesamum...	[more]
gi\|1009130374\|ref\|XP_015882265.1\|	3.2e-28	78.95	PREDICTED: mitochondrial import inner membrane translocase subunit TIM8-like iso...	[more]
gi\|595849876\|ref\|XP_007209810.1\|	3.2e-28	78.95	hypothetical protein PRUPE_ppa014244mg [Prunus persica]	[more]
gi\|694429363\|ref\|XP_009342209.1\|	5.4e-28	77.63	PREDICTED: mitochondrial import inner membrane translocase subunit TIM8-like [Py...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004217	Tim10-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0071806	protein transmembrane transport
biological_process	GO:0006810	transport
biological_process	GO:0072321	chaperone-mediated protein transport
cellular_component	GO:0005758	mitochondrial intermembrane space
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0008566	mitochondrial protein-transporting ATPase activity
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU41286	watermelon EST collection version 2.0	transcribed_cluster
WMU59413	watermelon EST collection version 2.0	transcribed_cluster
WMU59908	watermelon EST collection version 2.0	transcribed_cluster
WMU69686	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla019302	Cla019302.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU41286	WMU41286	transcribed_cluster
WMU59908	WMU59908	transcribed_cluster
WMU69686	WMU69686	transcribed_cluster
WMU59413	WMU59413	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004217	Tim10/DDP family zinc finger	GENE3D	G3DSA:1.10.287.810		coord: 16..76 score: 1.0
IPR004217	Tim10/DDP family zinc finger	PFAM	PF02953	zf-Tim10_DDP	coord: 13..76 score: 1.4
IPR004217	Tim10/DDP family zinc finger	unknown	SSF144122	Tim10-like	coord: 20..76 score: 2.62

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla019302	Cla97C06G127920	Watermelon (97103) v2	wmwmbB406
Cla019302	Csa1G001280	Cucumber (Chinese Long) v2	cuwmB094
Cla019302	MELO3C026182	Melon (DHL92) v3.5.1	mewmB289
Cla019302	ClCG06G018150	Watermelon (Charleston Gray)	wcgwmB344
Cla019302	CSPI01G00280	Wild cucumber (PI 183967)	cpiwmB099
Cla019302	Cucsa.157100	Cucumber (Gy14) v1	cgywmB279
Cla019302	CmaCh11G000150	Cucurbita maxima (Rimu)	cmawmB144
Cla019302	CmoCh11G000140	Cucurbita moschata (Rifu)	cmowmB128
Cla019302	Cp4.1LG04g16430	Cucurbita pepo (Zucchini)	cpewmB679
Cla019302	CsGy1G000290	Cucumber (Gy14) v2	cgybwmB094
Cla019302	MELO3C026182.2	Melon (DHL92) v3.6.1	medwmB283
Cla019302	Carg10260	Silver-seed gourd	carwmB0356
Cla019302	CsaV3_1G000290	Cucumber (Chinese Long) v3	cucwmB105

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla019302	Watermelon (Charleston Gray)	wcgwmB249
Cla019302	Cucumber (Chinese Long) v2	cuwmB088
Cla019302	Cucumber (Chinese Long) v2	cuwmB281
Cla019302	Cucurbita pepo (Zucchini)	cpewmB373
Cla019302	Cucurbita pepo (Zucchini)	cpewmB530
Cla019302	Bottle gourd (USVL1VR-Ls)	lsiwmB039
Cla019302	Bottle gourd (USVL1VR-Ls)	lsiwmB221
Cla019302	Bottle gourd (USVL1VR-Ls)	lsiwmB414
Cla019302	Cucumber (Gy14) v2	cgybwmB087
Cla019302	Cucumber (Gy14) v2	cgybwmB263
Cla019302	Melon (DHL92) v3.6.1	medwmB137
Cla019302	Melon (DHL92) v3.6.1	medwmB179
Cla019302	Melon (DHL92) v3.6.1	medwmB475
Cla019302	Silver-seed gourd	carwmB0495
Cla019302	Silver-seed gourd	carwmB0606
Cla019302	Cucumber (Chinese Long) v3	cucwmB098
Cla019302	Cucumber (Chinese Long) v3	cucwmB289
Cla019302	Watermelon (97103) v2	wmwmbB396
Cla019302	Wax gourd	wgowmB526
Cla019302	Wax gourd	wgowmB687
Cla019302	Watermelon (97103) v1	wmwmB097
Cla019302	Watermelon (97103) v1	wmwmB167
Cla019302	Cucurbita maxima (Rimu)	cmawmB072
Cla019302	Cucurbita maxima (Rimu)	cmawmB215
Cla019302	Cucurbita moschata (Rifu)	cmowmB064
Cla019302	Cucurbita moschata (Rifu)	cmowmB203
Cla019302	Cucurbita moschata (Rifu)	cmowmB398
Cla019302	Melon (DHL92) v3.5.1	mewmB182
Cla019302	Melon (DHL92) v3.5.1	mewmB485