CsaV3_1G000290 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G000290
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionmitochondrial import inner membrane translocase subunit TIM8
Locationchr1 : 180793 .. 182032 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCCTCGTCTCTTAACTCCCCGGAGCTGATGAATTTTATCAATGTGAGTTCATTTTCGTGGTTTTTAATTGTCACTTCTTGGCTATGATTCATTCTGGATCGAGTATGAAAAATGAAATGACGGTAATCATTTGTGGTATTTGAAATAGGAAAAAAGACAAGATCTTTAATTTCCTCTCCCATGAATATGCTATTGGGTTGCTTTTTATCGCCTTTATGCATTACCTATTTAGTTCGTAGAATATCCGAGAATGGTAAAATTGATATCAGTCATGATTATTTCTTGTCAACTCTGCTACTTAGTGTCTAATAGGACATAATGTGTTTGCAAGAAACTATTTTTTAGAAGCAATGACAGAGCCCTTGAGACTGAGACCTACACTGACCCTGTCTAAAGATAAGTCTTAAGAAATGCTTTGTTGTCATCAGAACTCCTTACTCACCAGATAGTACGCTCTTGAAATTAGAATATTATGTCTACAGCAGATTTGAGTTTGTCTCTAAATCGGAAATGAATTATATTTTTATCACAGTTTGACTTTGGTCCGAAAACTTCAGAGACGTCACTTGATGATTGTACTGCTATGTGGAATATCAATGAATACAAATCTGGAAACAATACATGCTCTGACTTCTTTTTGTTTCTTTTTCTTGAAAACAGAAACAAACATTTTTTTCCGATAAGCGTATTCAATGAGTTTATCAGCCATGCAAGTAATTATAGGCTATGGAATTCCATGGGTTCATATCACTTAAAAAGATCAGAGTTTGTCTGAACTTGGGGGTTACAGTTATATGTCTTTAAGTATGATTTTGTTTATGTAAGATGTTCAATTTTATTTGCCAACAAACCATAGGTGGCAATCAGTTGACTACTCATTGTGTGTTGTCTACTCTTCACCACGCACCCTCCATCGTTTTTCATTTCTGGATTTCAACCTTCCTCCCTGTTCAGTTTAGACAGAAGATGCTTTGTTTTGTGACTTCTATTTGTTGCAGTGACAAAATTTAAATGCTATTGGTCAATTATTTGATCATTTGTTAAACAGGAAGAGAAGCAAAGAGCTATGGTTGCTGAGATGGTGGCTAAGCTTACCAGTGTCTGTTGGGACAAGTGCATAACTGGAACACCAGGGAGTAAGTTCAGCTCCAGTGAATCCAACTGTCTATCCAACTGTGCCCAGCGCTATATGGATATGAGCATCATCATTATGAAACGATTTCAAAATAGTTAA

mRNA sequence

ATGGATTCCTCGTCTCTTAACTCCCCGGAGCTGATGAATTTTATCAATGAAGAGAAGCAAAGAGCTATGGTTGCTGAGATGGTGGCTAAGCTTACCAGTGTCTGTTGGGACAAGTGCATAACTGGAACACCAGGGAGTAAGTTCAGCTCCAGTGAATCCAACTGTCTATCCAACTGTGCCCAGCGCTATATGGATATGAGCATCATCATTATGAAACGATTTCAAAATAGTTAA

Coding sequence (CDS)

ATGGATTCCTCGTCTCTTAACTCCCCGGAGCTGATGAATTTTATCAATGAAGAGAAGCAAAGAGCTATGGTTGCTGAGATGGTGGCTAAGCTTACCAGTGTCTGTTGGGACAAGTGCATAACTGGAACACCAGGGAGTAAGTTCAGCTCCAGTGAATCCAACTGTCTATCCAACTGTGCCCAGCGCTATATGGATATGAGCATCATCATTATGAAACGATTTCAAAATAGTTAA

Protein sequence

MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCAQRYMDMSIIIMKRFQNS
Homology
[Close]
BLAST of CsaV3_1G000290 vs. NCBI nr
Match: XP_008464391.1 (PREDICTED: mitochondrial import inner membrane translocase subunit TIM8 [Cucumis melo] >XP_011649996.1 PREDICTED: mitochondrial import inner membrane translocase subunit TIM8 [Cucumis sativus] >XP_022924732.1 mitochondrial import inner membrane translocase subunit TIM8-like [Cucurbita moschata] >XP_022921432.1 mitochondrial import inner membrane translocase subunit TIM8 [Cucurbita moschata] >XP_022974369.1 mitochondrial import inner membrane translocase subunit TIM8-like [Cucurbita maxima] >XP_022988609.1 mitochondrial import inner membrane translocase subunit TIM8 [Cucurbita maxima] >XP_023529319.1 mitochondrial import inner membrane translocase subunit TIM8-like [Cucurbita pepo subsp. pepo] >XP_023516926.1 mitochondrial import inner membrane translocase subunit TIM8 [Cucurbita pepo subsp. pepo] >KGN63456.1 hypothetical protein Csa_1G001280 [Cucumis sativus])

HSP 1 Score: 156.0 bits (393), Expect = 5.3e-35
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA
Sbjct: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQNS 78
          QRYMDMSIIIMKRFQNS
Sbjct: 61 QRYMDMSIIIMKRFQNS 77

[Close]
BLAST of CsaV3_1G000290 vs. NCBI nr
Match: XP_022135207.1 (mitochondrial import inner membrane translocase subunit TIM8 [Momordica charantia])

HSP 1 Score: 154.5 bits (389), Expect = 1.5e-34
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITG+PGSKFSSSESNCLSNCA
Sbjct: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGSPGSKFSSSESNCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQNS 78
          QRYMDMSIIIMKRFQNS
Sbjct: 61 QRYMDMSIIIMKRFQNS 77

[Close]
BLAST of CsaV3_1G000290 vs. NCBI nr
Match: XP_022872200.1 (mitochondrial import inner membrane translocase subunit TIM8-like [Olea europaea var. sylvestris])

HSP 1 Score: 137.1 bits (344), Expect = 2.5e-29
Identity = 64/76 (84.21%), Postives = 73/76 (96.05%), Query Frame = 0 

Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MDSSSLNSPEL  FI++EK++AMV EM+AKLT+VCWDKCITGTPGSKFSSSES+CL+NCA
Sbjct: 1  MDSSSLNSPELQQFISQEKEKAMVNEMIAKLTTVCWDKCITGTPGSKFSSSESSCLTNCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          QRYMDMS+IIMKRFQN
Sbjct: 61 QRYMDMSLIIMKRFQN 76

[Close]
BLAST of CsaV3_1G000290 vs. NCBI nr
Match: XP_011073110.1 (mitochondrial import inner membrane translocase subunit TIM8 [Sesamum indicum])

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 62/75 (82.67%), Postives = 69/75 (92.00%), Query Frame = 0 

Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MD SSLNSPEL  F+N+EK++AMV EM+ KLTS CWDKCITGTPGSKFSSSESNCL+NCA
Sbjct: 1  MDPSSLNSPELQQFLNQEKEKAMVTEMIGKLTSACWDKCITGTPGSKFSSSESNCLTNCA 60

Query: 61 QRYMDMSIIIMKRFQ 76
          QRYMDMS+IIMKRFQ
Sbjct: 61 QRYMDMSLIIMKRFQ 75

[Close]
BLAST of CsaV3_1G000290 vs. NCBI nr
Match: XP_017256956.1 (PREDICTED: mitochondrial import inner membrane translocase subunit TIM8-like [Daucus carota subsp. sativus])

HSP 1 Score: 133.7 bits (335), Expect = 2.8e-28
Identity = 61/76 (80.26%), Postives = 73/76 (96.05%), Query Frame = 0 

Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MD S+LNSP++ +FIN+EK++AM+ EMVAKLT+VCWDKC++GTPGSKFSSSESNCLSNCA
Sbjct: 1  MDPSALNSPQMQHFINQEKEKAMLNEMVAKLTNVCWDKCVSGTPGSKFSSSESNCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          QRYMDMSIIIMKRFQ+
Sbjct: 61 QRYMDMSIIIMKRFQS 76

[Close]
BLAST of CsaV3_1G000290 vs. TAIR10
Match: AT5G50810.1 (translocase inner membrane subunit 8)

HSP 1 Score: 119.4 bits (298), Expect = 9.9e-28
Identity = 55/76 (72.37%), Postives = 67/76 (88.16%), Query Frame = 0 

Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MD S  N+PEL+ F+ +EK+RAMV EMV+K+TSVCWDKCIT  PGSKFSSSES+CL++CA
Sbjct: 1  MDPSMANNPELLQFLAQEKERAMVNEMVSKMTSVCWDKCITSAPGSKFSSSESSCLTHCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          QRYMDMS+IIMKRF +
Sbjct: 61 QRYMDMSMIIMKRFNS 76

[Close]
BLAST of CsaV3_1G000290 vs. Swiss-Prot
Match: sp|Q9XGY4|TIM8_ARATH (Mitochondrial import inner membrane translocase subunit TIM8 OS=Arabidopsis thaliana OX=3702 GN=TIM8 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.8e-26
Identity = 55/76 (72.37%), Postives = 67/76 (88.16%), Query Frame = 0 

Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MD S  N+PEL+ F+ +EK+RAMV EMV+K+TSVCWDKCIT  PGSKFSSSES+CL++CA
Sbjct: 1  MDPSMANNPELLQFLAQEKERAMVNEMVSKMTSVCWDKCITSAPGSKFSSSESSCLTHCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          QRYMDMS+IIMKRF +
Sbjct: 61 QRYMDMSMIIMKRFNS 76

[Close]
BLAST of CsaV3_1G000290 vs. Swiss-Prot
Match: sp|Q9Y1A3|TIM8_DROME (Mitochondrial import inner membrane translocase subunit Tim8 OS=Drosophila melanogaster OX=7227 GN=Tim8 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-09
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 0 

Query: 2  DSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCAQ 61
          ++ S N  EL  F+  EKQ+A V   + +   +CW+KCI G P +K   +   CLSNC  
Sbjct: 5  ENLSGNDKELQEFLLIEKQKAQVNAQIHEFNEICWEKCI-GKPSTKLDHATETCLSNCVD 64

Query: 62 RYMDMSIIIMKRF 75
          R++D S++I +RF
Sbjct: 65 RFIDTSLLITQRF 76

[Close]
BLAST of CsaV3_1G000290 vs. Swiss-Prot
Match: sp|Q09783|TIM8_SCHPO (Mitochondrial import inner membrane translocase subunit tim8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tim8 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.6e-09
Identity = 29/73 (39.73%), Postives = 42/73 (57.53%), Query Frame = 0 

Query: 2  DSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCAQ 61
          D S     EL  FI  E+Q+  + + + + TS CW KCI G  G+K   SE  CL NC +
Sbjct: 11 DLSESEQLELSKFIESEQQKVKLQQAIHQFTSTCWPKCI-GNIGNKLDKSEEQCLQNCVE 70

Query: 62 RYMDMSIIIMKRF 75
          R++D +  I+KR+
Sbjct: 71 RFLDCNFHIIKRY 82

[Close]
BLAST of CsaV3_1G000290 vs. Swiss-Prot
Match: sp|Q4IJW4|TIM8_GIBZE (Mitochondrial import inner membrane translocase subunit TIM8 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) OX=229533 GN=TIM8 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-08
Identity = 25/64 (39.06%), Postives = 38/64 (59.38%), Query Frame = 0 

Query: 10 ELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGT-PGSKFSSSESNCLSNCAQRYMDMSI 69
          EL  F+  E+QR+ +      LT +CW KC+ GT    K   SE  CL+NC +R++D++ 
Sbjct: 23 ELRQFLANEQQRSQIQAQTHSLTQMCWSKCVPGTIKNPKLDKSEETCLANCVERFLDVNY 82

Query: 70 IIMK 73
          + MK
Sbjct: 83 LTMK 86

[Close]
BLAST of CsaV3_1G000290 vs. Swiss-Prot
Match: sp|Q3ZBS8|TIM8A_BOVIN (Mitochondrial import inner membrane translocase subunit Tim8 A OS=Bos taurus OX=9913 GN=TIMM8A PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.9e-08
Identity = 30/85 (35.29%), Postives = 47/85 (55.29%), Query Frame = 0 

Query: 1  MDSSSLNS--------PELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSE 60
          MDSSS +S        P+L +FI  E Q+    ++V ++T +CW+KC+   PG K  S  
Sbjct: 1  MDSSSSSSAAGLGSVDPQLQHFIEVETQKQRFQQLVHQMTELCWEKCM-DKPGPKLDSRA 60

Query: 61 SNCLSNCAQRYMDMSIIIMKRFQNS 78
            C  NC +R++D S  I+ R + +
Sbjct: 61 EACFVNCVERFIDTSQFILNRLEQT 84

[Close]
BLAST of CsaV3_1G000290 vs. TrEMBL
Match: tr|A0A1S3CLD0|A0A1S3CLD0_CUCME (mitochondrial import inner membrane translocase subunit TIM8 OS=Cucumis melo OX=3656 GN=LOC103502294 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.5e-35
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA
Sbjct: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQNS 78
          QRYMDMSIIIMKRFQNS
Sbjct: 61 QRYMDMSIIIMKRFQNS 77

[Close]
BLAST of CsaV3_1G000290 vs. TrEMBL
Match: tr|A0A0A0LTY7|A0A0A0LTY7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001280 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.5e-35
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA
Sbjct: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQNS 78
          QRYMDMSIIIMKRFQNS
Sbjct: 61 QRYMDMSIIIMKRFQNS 77

[Close]
BLAST of CsaV3_1G000290 vs. TrEMBL
Match: tr|A0A2R6QGA2|A0A2R6QGA2_ACTCH (Mitochondrial import inner membrane translocase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc17989 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.4e-28
Identity = 64/76 (84.21%), Postives = 71/76 (93.42%), Query Frame = 0 

Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MD SSLNS EL +FIN+EK++AMV EMVAKLT+VCWDKCIT TPGSKFSSSES+CLSNCA
Sbjct: 1  MDPSSLNSAELQHFINKEKEKAMVNEMVAKLTTVCWDKCITSTPGSKFSSSESSCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          QRYMDMSIIIMKRFQ+
Sbjct: 61 QRYMDMSIIIMKRFQS 76

[Close]
BLAST of CsaV3_1G000290 vs. TrEMBL
Match: tr|M5WBB3|M5WBB3_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G146200 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.0e-28
Identity = 61/76 (80.26%), Postives = 71/76 (93.42%), Query Frame = 0 

Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MD SS+N+PEL+ FIN+EK+RAMV EMV KLT+VCWDKCITGTPGSKFSSSES CL+NCA
Sbjct: 1  MDPSSMNNPELLQFINQEKERAMVNEMVGKLTNVCWDKCITGTPGSKFSSSESACLANCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          +RY+DMS+IIMKRFQN
Sbjct: 61 RRYLDMSMIIMKRFQN 76

[Close]
BLAST of CsaV3_1G000290 vs. TrEMBL
Match: tr|A0A1U7ZGK1|A0A1U7ZGK1_NELNU (mitochondrial import inner membrane translocase subunit TIM8 OS=Nelumbo nucifera OX=4432 GN=LOC104592801 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.6e-27
Identity = 62/76 (81.58%), Postives = 70/76 (92.11%), Query Frame = 0 

Query: 1  MDSSSLNSPELMNFINEEKQRAMVAEMVAKLTSVCWDKCITGTPGSKFSSSESNCLSNCA 60
          MD S+LNS EL  F+++EKQ+AMV EMVAKLT+VCWDKCITGTPGSKFSSSES CLSNCA
Sbjct: 1  MDPSALNSAELQQFLDQEKQKAMVNEMVAKLTNVCWDKCITGTPGSKFSSSESTCLSNCA 60

Query: 61 QRYMDMSIIIMKRFQN 77
          QRYMDMS+IIMKRFQ+
Sbjct: 61 QRYMDMSLIIMKRFQS 76

The following BLAST results are available for this feature:
BLAST of CsaV3_1G000290 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008464391.15.3e-35100.00PREDICTED: mitochondrial import inner membrane translocase subunit TIM8 [Cucumis... [more]
XP_022135207.11.5e-3498.70mitochondrial import inner membrane translocase subunit TIM8 [Momordica charanti... [more]
XP_022872200.12.5e-2984.21mitochondrial import inner membrane translocase subunit TIM8-like [Olea europaea... [more]
XP_011073110.11.3e-2882.67mitochondrial import inner membrane translocase subunit TIM8 [Sesamum indicum][more]
XP_017256956.12.8e-2880.26PREDICTED: mitochondrial import inner membrane translocase subunit TIM8-like [Da... [more]
BLAST of CsaV3_1G000290 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G50810.19.9e-2872.37translocase inner membrane subunit 8[more]
BLAST of CsaV3_1G000290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9XGY4|TIM8_ARATH1.8e-2672.37Mitochondrial import inner membrane translocase subunit TIM8 OS=Arabidopsis thal... [more]
sp|Q9Y1A3|TIM8_DROME1.2e-0939.73Mitochondrial import inner membrane translocase subunit Tim8 OS=Drosophila melan... [more]
sp|Q09783|TIM8_SCHPO2.6e-0939.73Mitochondrial import inner membrane translocase subunit tim8 OS=Schizosaccharomy... [more]
sp|Q4IJW4|TIM8_GIBZE2.2e-0839.06Mitochondrial import inner membrane translocase subunit TIM8 OS=Gibberella zeae ... [more]
sp|Q3ZBS8|TIM8A_BOVIN4.9e-0835.29Mitochondrial import inner membrane translocase subunit Tim8 A OS=Bos taurus OX=... [more]
BLAST of CsaV3_1G000290 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CLD0|A0A1S3CLD0_CUCME3.5e-35100.00mitochondrial import inner membrane translocase subunit TIM8 OS=Cucumis melo OX=... [more]
tr|A0A0A0LTY7|A0A0A0LTY7_CUCSA3.5e-35100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001280 PE=3 SV=1[more]
tr|A0A2R6QGA2|A0A2R6QGA2_ACTCH5.4e-2884.21Mitochondrial import inner membrane translocase OS=Actinidia chinensis var. chin... [more]
tr|M5WBB3|M5WBB3_PRUPE7.0e-2880.26Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G146200 PE=3 SV=1[more]
tr|A0A1U7ZGK1|A0A1U7ZGK1_NELNU1.6e-2781.58mitochondrial import inner membrane translocase subunit TIM8 OS=Nelumbo nucifera... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0072321chaperone-mediated protein transport
Vocabulary: Cellular Component
TermDefinition
GO:0005758mitochondrial intermembrane space
Vocabulary: INTERPRO
TermDefinition
IPR039238Tim8/13
IPR004217Tim10-like
IPR035427Tim10-like_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0072321 chaperone-mediated protein transport
biological_process GO:0015031 protein transport
cellular_component GO:0005758 mitochondrial intermembrane space
molecular_function GO:0003674 molecular_function
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G000290.1CsaV3_1G000290.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035427Tim10-like domain superfamilyGENE3DG3DSA:1.10.287.810coord: 15..77
e-value: 1.4E-24
score: 87.3
IPR035427Tim10-like domain superfamilySUPERFAMILYSSF144122Tim10-likecoord: 20..76
IPR004217Tim10-likePFAMPF02953zf-Tim10_DDPcoord: 13..75
e-value: 3.3E-25
score: 87.4
IPR039238Mitochondrial import inner membrane translocase subunit Tim8/13PANTHERPTHR19338TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 13 HOMOLOGcoord: 1..76
NoneNo IPR availablePANTHERPTHR19338:SF4MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM8 Acoord: 1..76

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G000290CSPI01G00280Wild cucumber (PI 183967)cpicucB001
CsaV3_1G000290Cucsa.157100Cucumber (Gy14) v1cgycucB236
CsaV3_1G000290CmaCh11G000150Cucurbita maxima (Rimu)cmacucB0100
CsaV3_1G000290CmoCh11G000140Cucurbita moschata (Rifu)cmocucB0091
CsaV3_1G000290Cp4.1LG04g16430Cucurbita pepo (Zucchini)cpecucB0814
CsaV3_1G000290CsGy1G000290Cucumber (Gy14) v2cgybcucB002
CsaV3_1G000290Carg10260Silver-seed gourdcarcucB0395
CsaV3_1G000290Cla019302Watermelon (97103) v1cucwmB105
CsaV3_1G000290MELO3C026182Melon (DHL92) v3.5.1cucmeB053
CsaV3_1G000290ClCG06G018150Watermelon (Charleston Gray)cucwcgB088
CsaV3_1G000290MELO3C026182.2Melon (DHL92) v3.6.1cucmedB050
CsaV3_1G000290Cla97C06G127920Watermelon (97103) v2cucwmbB076
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G000290Cucumber (Chinese Long) v3cuccucB003
CsaV3_1G000290Cucumber (Chinese Long) v3cuccucB017
CsaV3_1G000290Silver-seed gourdcarcucB0643
CsaV3_1G000290Cucumber (Gy14) v2cgybcucB010
CsaV3_1G000290Cucumber (Gy14) v2cgybcucB101
CsaV3_1G000290Cucurbita maxima (Rimu)cmacucB0058
CsaV3_1G000290Cucurbita maxima (Rimu)cmacucB0117
CsaV3_1G000290Cucurbita maxima (Rimu)cmacucB0256
CsaV3_1G000290Cucurbita maxima (Rimu)cmacucB0472
CsaV3_1G000290Cucurbita moschata (Rifu)cmocucB0044
CsaV3_1G000290Cucurbita moschata (Rifu)cmocucB0243
CsaV3_1G000290Cucurbita moschata (Rifu)cmocucB0094
CsaV3_1G000290Cucurbita moschata (Rifu)cmocucB0470
CsaV3_1G000290Cucurbita pepo (Zucchini)cpecucB0029
CsaV3_1G000290Cucurbita pepo (Zucchini)cpecucB0442
CsaV3_1G000290Cucurbita pepo (Zucchini)cpecucB0630
CsaV3_1G000290Cucurbita pepo (Zucchini)cpecucB0804
CsaV3_1G000290Wild cucumber (PI 183967)cpicucB014
CsaV3_1G000290Wild cucumber (PI 183967)cpicucB126
CsaV3_1G000290Bottle gourd (USVL1VR-Ls)cuclsiB039
CsaV3_1G000290Bottle gourd (USVL1VR-Ls)cuclsiB081
CsaV3_1G000290Melon (DHL92) v3.5.1cucmeB019
CsaV3_1G000290Melon (DHL92) v3.5.1cucmeB084
CsaV3_1G000290Melon (DHL92) v3.6.1cucmedB017
CsaV3_1G000290Melon (DHL92) v3.6.1cucmedB077
CsaV3_1G000290Watermelon (Charleston Gray)cucwcgB056
CsaV3_1G000290Watermelon (97103) v1cucwmB032
CsaV3_1G000290Watermelon (97103) v2cucwmbB048
CsaV3_1G000290Wax gourdcucwgoB062
CsaV3_1G000290Wax gourdcucwgoB087