Cla013037 (gene) Watermelon (97103) v1

Overview
NameCla013037
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPreproricin (Fragment) (AHRD V1 **-- D6MWJ0_RICCO); contains Interpro domain(s) IPR000772 Ricin B lectin
LocationChr5 : 10209933 .. 10210811 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGAAATTGTGTTGAGCATTGTTGTGGCCTTCTCACTCACTGCCCATATCGCGATGGCTGTGCCCCCCAAATATGGATATGGAGGGTTCCCTGGAAGCACACATCTTGTCGGTCGAGACGGATTGTGTTTAGAGATGTCTCCATGGTTTAACAAAGGTACTTATTTTCCAACTCGATTATCACCATGCGACGAACGCAAGAAACAAATTCAATTATGGACAGTTCTCCAAGACGGCACGATTCGGCCCATGAATGATAAATATTGCTTGGTTTCTTACCTACCCGTCGGTATGCCCACAACCAATGTGATAGTAAGCGAGTGTGATAAGGAGTCAAATCCTAACAAGGTATGGAACCACAAGAAGGACGGAACAATCGTCCACGTCGGATCAGGAATGGTTCTAACGGGAAAATCAAACGCATATGTGAGTGTGACATTAGAAAAGAACGAAAATGTACCGTCGCAAAGTTGGGAAGCCACAGAAAGTTTCTCCCCAATGGAGGCCAACATCAAGTGGCTCGACAACTTGTGTTTGCAGTCTACAGAAGATTCGAATCATGTCGGGTTGGATGGATGTAATAGAGAAAATAAGAACCAAAGATGGGCATTGTATGGAGATGGAACCATTCGACAAAGTGTCAATAGAAACCATTGCTTGACTTCTAAAGAAGATTATGGTCATTATATAGTTGTGTCTCAATGTGAAGACATACCACAACAACGTTGGGGCCTTAGCGCAGAAGACAACACTATTAACCATCCAGCCAACATTGACATGGTCATGGATGCGCTTAGTGTCCCATTTAGCTTTGGTCAAGCGATCTTTATGGGCCGCCGTGATGGAAGTCCTAGCCAGCGATGGATCATCTACTGA

mRNA sequence

ATGAGAGAAATTGTGTTGAGCATTGTTGTGGCCTTCTCACTCACTGCCCATATCGCGATGGCTGTGCCCCCCAAATATGGATATGGAGGGTTCCCTGGAAGCACACATCTTGTCGGTCGAGACGGATTGTGTTTAGAGATGTCTCCATGGTTTAACAAAGGTACTTATTTTCCAACTCGATTATCACCATGCGACGAACGCAAGAAACAAATTCAATTATGGACAGTTCTCCAAGACGGCACGATTCGGCCCATGAATGATAAATATTGCTTGGTTTCTTACCTACCCGTCGGTATGCCCACAACCAATGTGATAGTAAGCGAGTGTGATAAGGAGTCAAATCCTAACAAGGTATGGAACCACAAGAAGGACGGAACAATCGTCCACGTCGGATCAGGAATGGTTCTAACGGGAAAATCAAACGCATATGTGAGTGTGACATTAGAAAAGAACGAAAATGTACCGTCGCAAAGTTGGGAAGCCACAGAAAGTTTCTCCCCAATGGAGGCCAACATCAAGTGGCTCGACAACTTGTGTTTGCAGTCTACAGAAGATTCGAATCATGTCGGGTTGGATGGATGTAATAGAGAAAATAAGAACCAAAGATGGGCATTGTATGGAGATGGAACCATTCGACAAAGTGTCAATAGAAACCATTGCTTGACTTCTAAAGAAGATTATGGTCATTATATAGTTGTGTCTCAATGTGAAGACATACCACAACAACGTTGGGGCCTTAGCGCAGAAGACAACACTATTAACCATCCAGCCAACATTGACATGGTCATGGATGCGCTTAGTGTCCCATTTAGCTTTGGTCAAGCGATCTTTATGGGCCGCCGTGATGGAAGTCCTAGCCAGCGATGGATCATCTACTGA

Coding sequence (CDS)

ATGAGAGAAATTGTGTTGAGCATTGTTGTGGCCTTCTCACTCACTGCCCATATCGCGATGGCTGTGCCCCCCAAATATGGATATGGAGGGTTCCCTGGAAGCACACATCTTGTCGGTCGAGACGGATTGTGTTTAGAGATGTCTCCATGGTTTAACAAAGGTACTTATTTTCCAACTCGATTATCACCATGCGACGAACGCAAGAAACAAATTCAATTATGGACAGTTCTCCAAGACGGCACGATTCGGCCCATGAATGATAAATATTGCTTGGTTTCTTACCTACCCGTCGGTATGCCCACAACCAATGTGATAGTAAGCGAGTGTGATAAGGAGTCAAATCCTAACAAGGTATGGAACCACAAGAAGGACGGAACAATCGTCCACGTCGGATCAGGAATGGTTCTAACGGGAAAATCAAACGCATATGTGAGTGTGACATTAGAAAAGAACGAAAATGTACCGTCGCAAAGTTGGGAAGCCACAGAAAGTTTCTCCCCAATGGAGGCCAACATCAAGTGGCTCGACAACTTGTGTTTGCAGTCTACAGAAGATTCGAATCATGTCGGGTTGGATGGATGTAATAGAGAAAATAAGAACCAAAGATGGGCATTGTATGGAGATGGAACCATTCGACAAAGTGTCAATAGAAACCATTGCTTGACTTCTAAAGAAGATTATGGTCATTATATAGTTGTGTCTCAATGTGAAGACATACCACAACAACGTTGGGGCCTTAGCGCAGAAGACAACACTATTAACCATCCAGCCAACATTGACATGGTCATGGATGCGCTTAGTGTCCCATTTAGCTTTGGTCAAGCGATCTTTATGGGCCGCCGTGATGGAAGTCCTAGCCAGCGATGGATCATCTACTGA

Protein sequence

MREIVLSIVVAFSLTAHIAMAVPPKYGYGGFPGSTHLVGRDGLCLEMSPWFNKGTYFPTRLSPCDERKKQIQLWTVLQDGTIRPMNDKYCLVSYLPVGMPTTNVIVSECDKESNPNKVWNHKKDGTIVHVGSGMVLTGKSNAYVSVTLEKNENVPSQSWEATESFSPMEANIKWLDNLCLQSTEDSNHVGLDGCNRENKNQRWALYGDGTIRQSVNRNHCLTSKEDYGHYIVVSQCEDIPQQRWGLSAEDNTINHPANIDMVMDALSVPFSFGQAIFMGRRDGSPSQRWIIY
Homology
[Close]
BLAST of Cla013037 vs. Swiss-Prot
Match: ML3_VISAL (Beta-galactoside-specific lectin 3 OS=Viscum album PE=1 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 3.6e-24
Identity = 82/262 (31.30%), Postives = 129/262 (49.24%), Query Frame = 1 

Query: 34  STHLVGRDGLCLEMSPW-FNKGTYFPTRLSPCDERKKQIQLWTVLQDGTIRPMNDKYCLV 93
           +  +VGRDGLC+++    F+ G   P +LSPC       QLWT+ +DGTIR  ++  CL 
Sbjct: 317 TVRIVGRDGLCVDVRDGKFHNGN--PIQLSPCKSNTDPNQLWTIRRDGTIR--SNGRCLT 376

Query: 94  SY-LPVGMPTTNVIVSECDKESNPNKVWNHKKDGTIVHVGSGMVLTGKSNAY-VSVTLEK 153
           +Y    G+    V++ +C+       +W    +GTI++  S +VL   S +   ++T++ 
Sbjct: 377 TYGYTAGV---YVMIFDCNTAVREATLWQIWGNGTIINPRSNLVLGAASGSSGTTLTVQT 436

Query: 154 NENVPSQSWEATESFSPMEANIKWLDNLCLQSTEDSNHVGLDGCNRENKNQRWALYGDGT 213
                 Q W A    +P E  I    +LC+++   S  V ++ C    +NQ WALYGDG+
Sbjct: 437 QVYSLGQGWLAGNDTAPREVTIYGFRDLCMEANGAS--VWVETCGSSTENQNWALYGDGS 496

Query: 214 IRQSVNRNHCLTSKEDYGHYI--VVSQCEDIPQQRWGLSAEDNTINHPANIDMVMDALSV 273
           IR   N++ CLT + D    +  +VS       QRW  + E   +N   N  +VMD    
Sbjct: 497 IRPKQNQDQCLTCQGDSVATVINIVSCSAGSSGQRWVFTNEGTILN--LNNGLVMDVAQS 556

Query: 274 PFSFGQAIFMGRRDGSPSQRWI 291
             S  + I +    G+P+Q W+
Sbjct: 557 NPSL-RRIIIYPATGNPNQMWL 566

[Close]
BLAST of Cla013037 vs. Swiss-Prot
Match: ABRA_ABRPR (Abrin-a OS=Abrus precatorius PE=1 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 1.0e-23
Identity = 83/257 (32.30%), Postives = 135/257 (52.53%), Query Frame = 1 

Query: 39  GRDGLCLEMSPWFNKGTYFPTRLS--PCDERKKQIQLWTVLQDGTIRPMNDKYCLVSYLP 98
           GRDG+C+++   ++ G +   R+    C +R ++ QLWT+  D TIR  N K CL +Y  
Sbjct: 281 GRDGMCVDV---YDNGYHNGNRIIMWKCKDRLEENQLWTLKSDKTIRS-NGK-CLTTYGY 340

Query: 99  VGMPTTNVIVSECDKESNPNKVWNHKKDGTIVHVGSGMVLTGKSNAYV-SVTLEKNENVP 158
              P + V++ +C         W    +GTI++  S +VL+ +S++   ++T++ NE + 
Sbjct: 341 A--PGSYVMIYDCTSAVAEATYWEIWDNGTIINPKSALVLSAESSSMGGTLTVQTNEYLM 400

Query: 159 SQSWEATESFSPMEANIKWLDNLCLQSTEDSNHVGLDGCNRENKNQRWALYGDGTIRQSV 218
            Q W    + SP   +I    +LC+Q+    ++V +  C+   K Q+WALY DG+IR   
Sbjct: 401 RQGWRTGNNTSPFVTSISGYSDLCMQA--QGSNVWMADCDSNKKEQQWALYTDGSIRSVQ 460

Query: 219 NRNHCLTSKE-DYGHYIVVSQCED-IPQQRWGLSAEDNTINHPANIDMVMDALSVPFSFG 278
           N N+CLTSK+   G  I++  C +    QRW +   D +I +    DMVMD      S  
Sbjct: 461 NTNNCLTSKDHKQGSTILLMGCSNGWASQRW-VFKNDGSI-YSLYDDMVMDVKGSDPSLK 520

Query: 279 QAIFMGRRDGSPSQRWI 291
           Q I +    G P+Q W+
Sbjct: 521 Q-IILWPYTGKPNQIWL 525

[Close]
BLAST of Cla013037 vs. Swiss-Prot
Match: RIP1_SAMNI (Ribosome-inactivating protein SNAI' OS=Sambucus nigra PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.0e-23
Identity = 81/258 (31.40%), Postives = 127/258 (49.22%), Query Frame = 1 

Query: 39  GRDGLCLEMSPWFNK-GTYFPTRLSPCDERKKQIQLWTVLQDGTIRPMNDKYCLVSYLPV 98
           GRDG C E+     K GT  P +LS C E+  Q   WT   DGTI+ +    CL +    
Sbjct: 323 GRDGFCAEVKNGDEKDGT--PVQLSSCGEQSNQ--QWTFSTDGTIQSLGK--CLTT---- 382

Query: 99  GMPTTNVIVSECDKESNPNKVWNHKKDGTIVHVGSGMVLTG-KSNAYVSVTLEKNENVPS 158
              +++V++  C      +  W    DGTI +  SG+VLT  K+     V+LEKN +   
Sbjct: 383 ---SSSVMIYNCKVVPPESTKWVVSIDGTITNPRSGLVLTAPKAAEGTLVSLEKNVHAAR 442

Query: 159 QSWEATESFSPMEANIKWLDNLCLQSTEDSNHVGLDGCNRENK---NQRWALYGDGTIRQ 218
           Q W    +  P+   I   + +CL++   +N V L  C+ ++    +Q+WALYGDGTIR 
Sbjct: 443 QGW-IVGNVEPLVTFIVGYEQMCLETNPGNNDVSLGDCSVKSASKVDQKWALYGDGTIRV 502

Query: 219 SVNRNHCLTSK-EDYGHYIVVSQCEDIPQQRWGLSAEDNTINHPANIDMVMDALSVPFSF 278
           + +R+ C+TS+ +     I++ +C     QRW  + +    N  + + M +D   VP   
Sbjct: 503 NNDRSLCVTSEGKSSNEPIIILKCLGWANQRWVFNTDGTISNPDSKLVMHVDQNDVPL-- 562

Query: 279 GQAIFMGRRDGSPSQRWI 291
            + I +    G+ +Q+WI
Sbjct: 563 -RKIILSHPSGTSNQQWI 563

[Close]
BLAST of Cla013037 vs. Swiss-Prot
Match: ABRC_ABRPR (Abrin-c OS=Abrus precatorius PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.8e-23
Identity = 81/257 (31.52%), Postives = 129/257 (50.19%), Query Frame = 1 

Query: 39  GRDGLCLEMSPWFNKGTYFPTRLSP--CDERKKQIQLWTVLQDGTIRPMNDKYCLVSYLP 98
           GRDG+C+++   ++ G +   R+    C +R ++ QLWT+  D TIR          Y P
Sbjct: 315 GRDGMCVDV---YDDGYHNGNRIIAWKCKDRLEENQLWTLKSDKTIRSNGKCLTTEGYAP 374

Query: 99  VGMPTTNVIVSECDKESNPNKVWNHKKDGTIVHVGSGMVLTGKSNAYV-SVTLEKNENVP 158
                  V++ +C         W    +GTI++  S +VL+ +S++   ++T++ NE + 
Sbjct: 375 GNY----VMIYDCTSAVAEATYWEIWDNGTIINPKSALVLSAESSSMGGTLTVQTNEYLM 434

Query: 159 SQSWEATESFSPMEANIKWLDNLCLQSTEDSNHVGLDGCNRENKNQRWALYGDGTIRQSV 218
            Q W    + SP   +I    +LC+Q+    ++V L  C+   K Q+WALY DG+IR   
Sbjct: 435 RQGWRTGNNTSPFVTSISGYSDLCMQA--QGSNVWLADCDNNKKEQQWALYTDGSIRSVQ 494

Query: 219 NRNHCLTSKE-DYGHYIVVSQCED-IPQQRWGLSAEDNTINHPANIDMVMDALSVPFSFG 278
           N N+CLTSK+   G  IV+  C +    QRW L   D +I +  + DMVMD      S  
Sbjct: 495 NTNNCLTSKDHKQGSPIVLMACSNGWASQRW-LFKNDGSI-YNLHDDMVMDVKRSDPSL- 554

Query: 279 QAIFMGRRDGSPSQRWI 291
           + I +    G P+Q W+
Sbjct: 555 KEIILHPYHGKPNQIWL 559

[Close]
BLAST of Cla013037 vs. Swiss-Prot
Match: ABRD_ABRPR (Abrin-d OS=Abrus precatorius PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.8e-23
Identity = 82/257 (31.91%), Postives = 128/257 (49.81%), Query Frame = 1 

Query: 39  GRDGLCLEMSPWFNKGTYFPTRLSP--CDERKKQIQLWTVLQDGTIRPMNDKYCLVSYLP 98
           GRDG+C+++   ++ G +   R+    C +R ++ QLWT+  D TIR          Y P
Sbjct: 281 GRDGMCVDV---YDDGYHNGNRIIAWKCKDRLEENQLWTLKSDLTIRSNGKCLTTEGYAP 340

Query: 99  VGMPTTNVIVSECDKESNPNKVWNHKKDGTIVHVGSGMVLTGKSNAYV-SVTLEKNENVP 158
                  V++ +C         W    +GTI++  S +VL+ +S++   ++T++ NE + 
Sbjct: 341 GNY----VMIYDCTSAVAEATYWEIWDNGTIINPKSALVLSAESSSMGGTLTVQTNEYLM 400

Query: 159 SQSWEATESFSPMEANIKWLDNLCLQSTEDSNHVGLDGCNRENKNQRWALYGDGTIRQSV 218
            Q W    + SP   +I    +LC+Q+    ++V L  C+   K Q+WALY DG+IR   
Sbjct: 401 RQGWRTGNNTSPFVTSISGYSDLCMQA--QGSNVWLADCDNNKKEQQWALYTDGSIRSVQ 460

Query: 219 NRNHCLTSKE-DYGHYIVVSQCED-IPQQRWGLSAEDNTINHPANIDMVMDALSVPFSFG 278
           N N+CLTSK+   G  IV+  C +    QRW L   D +I +    DMVMD      S  
Sbjct: 461 NTNNCLTSKDHKQGSPIVLMACSNGWASQRW-LFKNDGSI-YSLYDDMVMDVKGSDPSLK 520

Query: 279 QAIFMGRRDGSPSQRWI 291
           Q I +    G P+Q W+
Sbjct: 521 Q-IILWPYTGKPNQIWL 525

[Close]
BLAST of Cla013037 vs. TrEMBL
Match: A0A0A0L756_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219180 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 3.0e-118
Identity = 210/293 (71.67%), Postives = 243/293 (82.94%), Query Frame = 1 

Query: 1   MREIVLSIVVAFSLTAHIAMAVPPKYGYGGFPGSTHLVGRDGLCLEMSPWFNKGTYFPTR 60
           M+EIVLSIVVAFSLT H+AMAVP  YGY   PG+THLVGRDGLCLEMSPWF KG+ FPTR
Sbjct: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTR 60

Query: 61  LSPCDERKKQIQLWTVLQDGTIRPMNDKYCLVSYLPVGMPTTNVIVSECDKESNPNKVWN 120
           LSPC+E+KKQ QLWTVLQD TIRPMND+YCLVSY+ V    TNV+VSEC KE + NK W 
Sbjct: 61  LSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNF-ITNVVVSECAKEPHSNKKWI 120

Query: 121 HKKDGTIVHVGSGMVLTGKSNAYVSVTLEKNENVPSQSWEATESFSPMEANIKWLDNLCL 180
           HK+D TIVHVGSGMVLTG SN    VT+++N+N PSQSWEAT+S +PM ANIKWL+NLCL
Sbjct: 121 HKEDRTIVHVGSGMVLTGNSNY---VTVQRNKNAPSQSWEATKSLTPMVANIKWLENLCL 180

Query: 181 QSTEDSNHVGLDGCNRENKNQRWALYGDGTIRQSVNRNHCLTSKEDYGHYIVVSQCEDIP 240
           QST+DSN+V LDGCN ENK+Q W+LYGDGTIR+ VNRN+CLTS++D+G ++ VS+CED P
Sbjct: 181 QSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDKP 240

Query: 241 QQRWGLSAEDNTINHPANIDMVMDALSVPF-SFGQAIFMGRRDGSPSQRWIIY 293
           QQRWGL AEDNTINHP N DMVMD LSVPF     A+    RDG+ +QRWIIY
Sbjct: 241 QQRWGLGAEDNTINHP-NTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWIIY 288

[Close]
BLAST of Cla013037 vs. TrEMBL
Match: Q9SLV9_CUCSA (XSP30 OS=Cucumis sativus GN=XSP30 PE=2 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 5.7e-101
Identity = 190/297 (63.97%), Postives = 225/297 (75.76%), Query Frame = 1 

Query: 1   MREIVLSIVVAFSLTAHIAMAVPPKYGYG----GFPGSTHLVGRDGLCLEMSPWFNK-GT 60
           M+EIVLSI+VAFSLT  +A+AVPP YGYG    G PG+THLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  YFPTRLSPCDERKKQIQLWTVLQDGTIRPMNDKYCLVSYLPVGMPTTNVIVSECDKESNP 120
            FPTRLSPCDE KKQ QLWT++ DGTIRPMNDK+CL + +  G+     +VSEC K S+P
Sbjct: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGV-INKAVVSECGKVSDP 120

Query: 121 NKVWNHKKDGTIVHVGSGMVLTGKSNAYVSVTLEKNENVPSQSWEATESFSPMEANIKWL 180
           NK W  K DGTI  V S MVLTG  +    VTL+ N+  PSQSWE TES + M ANI+WL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDY---VTLQSNKYTPSQSWEVTESLNSMVANIEWL 180

Query: 181 DNLCLQSTEDSNHVGLDGCNRENKNQRWALYGDGTIRQSVNRNHCLTSKEDYGHYIVVSQ 240
           +NLCLQST+DS+HVGL+GCN +NK QRWALY DGTIRQ VN+N+CLTS +D+G ++VVS+
Sbjct: 181 NNLCLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSK 240

Query: 241 CEDIPQQRWGLSAEDNTINHPANIDMVMDALSVPFS-FGQAIFMGRRDGSPSQRWII 292
           CED PQQRW L A+D TI+HP N DMV+D  SVP S F   +   RRDGS SQRW I
Sbjct: 241 CEDKPQQRWSLDAKDYTIDHP-NTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

[Close]
BLAST of Cla013037 vs. TrEMBL
Match: A0A0A0L9D1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G217160 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.6e-100
Identity = 189/297 (63.64%), Postives = 224/297 (75.42%), Query Frame = 1 

Query: 1   MREIVLSIVVAFSLTAHIAMAVPPKYGYG----GFPGSTHLVGRDGLCLEMSPWFNK-GT 60
           M+EIVLSI+VAFSLT  + +AVPP YGYG    G PG+THLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  YFPTRLSPCDERKKQIQLWTVLQDGTIRPMNDKYCLVSYLPVGMPTTNVIVSECDKESNP 120
            FPTRLSPCDE KKQ QLWT++ DGTIRPMNDK+CL + +  G+     +VSEC K S+P
Sbjct: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGV-INKAVVSECGKVSDP 120

Query: 121 NKVWNHKKDGTIVHVGSGMVLTGKSNAYVSVTLEKNENVPSQSWEATESFSPMEANIKWL 180
           NK W  K DGTI  V S MVLTG  +    VTL+ N+  PSQSWE TES + M ANI+WL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDY---VTLQSNKYTPSQSWEVTESLNSMVANIEWL 180

Query: 181 DNLCLQSTEDSNHVGLDGCNRENKNQRWALYGDGTIRQSVNRNHCLTSKEDYGHYIVVSQ 240
           +NLCLQST+DS+HVGL+GCN +NK QRWALY DGTIRQ VN+N+CLTS +D+G ++VVS+
Sbjct: 181 NNLCLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSK 240

Query: 241 CEDIPQQRWGLSAEDNTINHPANIDMVMDALSVPFS-FGQAIFMGRRDGSPSQRWII 292
           CED PQQRW L A+D TI+HP N DMV+D  SVP S F   +   RRDGS SQRW I
Sbjct: 241 CEDKPQQRWSLDAKDYTIDHP-NTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

[Close]
BLAST of Cla013037 vs. TrEMBL
Match: A0A0A0LAC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G217140 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 3.8e-89
Identity = 177/297 (59.60%), Postives = 216/297 (72.73%), Query Frame = 1 

Query: 1   MREIVLSIVVAFSLTAHIAMAVPPKYGYG----GFPGSTHLVGRDGLCLEM---SPWFNK 60
           M+EIVLSI+VAFSLT  + +AVPP YGYG    G PG+THLVGRDGLCLEM     +   
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60

Query: 61  GTYFPTRLSPCDERKKQIQLWTVLQDGTIRPMNDKYCLVSYLPVGMPTTNVIVSECDKES 120
           G  FPTRL PCDE KKQ QLWTV+ DGTIRPMND++CL + +  G+     +VSEC K S
Sbjct: 61  GINFPTRLLPCDE-KKQTQLWTVVGDGTIRPMNDRFCLAADVFYGV-INKAVVSECGKVS 120

Query: 121 NPNKVWNHKKDGTIVHVGSGMVLTGKSNAYVSVTLEKNENVPSQSWEATESFSPMEANIK 180
           + NK W HK DGTI    S MVLTG S+    VTL+  +  PSQSWE TES +PM ANI+
Sbjct: 121 DSNKQWIHKNDGTIALAESRMVLTGDSDY---VTLQSIKYTPSQSWEVTESLNPMVANIE 180

Query: 181 WLDNLCLQSTEDSNHVGLDGCNRENKNQRWALYGDGTIRQSVNRNHCLTSKEDYGHYIVV 240
           WL+NLCLQST+DS++VGL+GCN   K QRWALY DGTIRQ VNRN+CLTS+++Y   +VV
Sbjct: 181 WLNNLCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVV 240

Query: 241 SQCEDIPQQRWGLSAEDNTINHPANIDMVMDALSVPFSFGQAIFM-GRRDGSPSQRW 290
           S+CED PQQRW L+A+D+TI+HP N +MV+D L+V  S    + +    DGS SQRW
Sbjct: 241 SKCEDKPQQRWSLNAKDSTIDHP-NTNMVLDVLNVLDSASPLVIVTNHPDGSASQRW 291

[Close]
BLAST of Cla013037 vs. TrEMBL
Match: Q58A89_SAMRA (Lectin OS=Sambucus racemosa subsp. sieboldiana GN=LecSSA-b-3a PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.7e-26
Identity = 82/264 (31.06%), Postives = 141/264 (53.41%), Query Frame = 1 

Query: 30  GFPGSTHLVGRDGLCLEMSPWFNK-GTYFPTRLSPCDERKKQIQLWTVLQDGTIRPMNDK 89
           G P + +++GR+GLC+++   ++  GT  P +L PC   +++ Q WT  +DGTIR M  K
Sbjct: 15  GEPITGNIIGRNGLCVDVRNGYSTDGT--PIQLWPCG--RQRNQQWTFYEDGTIRSMG-K 74

Query: 90  YCLVSYLPVGMPTTNVIVSECDKESNPNKVWNHKKDGTIVHVGSGMVLTGKSNAYVSV-T 149
               + L  G   +N+++  C         W    DG+I+++ SG+V+T  S A  ++  
Sbjct: 75  CMTANGLNSG---SNIMIFNCSTAVENAIKWEVTIDGSIINLSSGLVMTAPSAASRTILL 134

Query: 150 LEKNENVPSQSWEATESFSPMEANIKWLDNLCLQSTEDSNHVGLDGCNRENKNQRWALYG 209
           LE N    SQ W  +    P+ A+I     +CLQ+  ++N V ++ C   +  Q+WAL+G
Sbjct: 135 LENNIYAASQGWTVSNDVKPIVASIVGYKEMCLQANGENNGVWMEDCEVTSLQQQWALFG 194

Query: 210 DGTIRQSVNRNHCLTSK-EDYGHYIVVSQCEDIPQQRWGLSAEDNTINHPANIDMVMDAL 269
           D TIR + +R  C+TS   +    I+  +C+ +P QRW  ++    +N   N  +VMD  
Sbjct: 195 DRTIRVNSSRGLCVTSNGYNSKDLIITLKCQGLPSQRWFFNSNGAIVN--PNSTLVMDVR 254

Query: 270 SVPFSFGQAIFMGRRDGSPSQRWI 291
           +   S  + I +    G+P+Q+W+
Sbjct: 255 ASNVSL-REIIISPATGNPNQQWV 267

[Close]
BLAST of Cla013037 vs. NCBI nr
Match: gi|449457105|ref|XP_004146289.1| (PREDICTED: nigrin b-like [Cucumis sativus])

HSP 1 Score: 433.0 bits (1112), Expect = 4.3e-118
Identity = 210/293 (71.67%), Postives = 243/293 (82.94%), Query Frame = 1 

Query: 1   MREIVLSIVVAFSLTAHIAMAVPPKYGYGGFPGSTHLVGRDGLCLEMSPWFNKGTYFPTR 60
           M+EIVLSIVVAFSLT H+AMAVP  YGY   PG+THLVGRDGLCLEMSPWF KG+ FPTR
Sbjct: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTR 60

Query: 61  LSPCDERKKQIQLWTVLQDGTIRPMNDKYCLVSYLPVGMPTTNVIVSECDKESNPNKVWN 120
           LSPC+E+KKQ QLWTVLQD TIRPMND+YCLVSY+ V    TNV+VSEC KE + NK W 
Sbjct: 61  LSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNF-ITNVVVSECAKEPHSNKKWI 120

Query: 121 HKKDGTIVHVGSGMVLTGKSNAYVSVTLEKNENVPSQSWEATESFSPMEANIKWLDNLCL 180
           HK+D TIVHVGSGMVLTG SN    VT+++N+N PSQSWEAT+S +PM ANIKWL+NLCL
Sbjct: 121 HKEDRTIVHVGSGMVLTGNSNY---VTVQRNKNAPSQSWEATKSLTPMVANIKWLENLCL 180

Query: 181 QSTEDSNHVGLDGCNRENKNQRWALYGDGTIRQSVNRNHCLTSKEDYGHYIVVSQCEDIP 240
           QST+DSN+V LDGCN ENK+Q W+LYGDGTIR+ VNRN+CLTS++D+G ++ VS+CED P
Sbjct: 181 QSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDKP 240

Query: 241 QQRWGLSAEDNTINHPANIDMVMDALSVPF-SFGQAIFMGRRDGSPSQRWIIY 293
           QQRWGL AEDNTINHP N DMVMD LSVPF     A+    RDG+ +QRWIIY
Sbjct: 241 QQRWGLGAEDNTINHP-NTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWIIY 288

[Close]
BLAST of Cla013037 vs. NCBI nr
Match: gi|659112133|ref|XP_008456079.1| (PREDICTED: nigrin b-like [Cucumis melo])

HSP 1 Score: 417.9 bits (1073), Expect = 1.4e-113
Identity = 207/296 (69.93%), Postives = 237/296 (80.07%), Query Frame = 1 

Query: 1   MREIVLSIVVAFSLTAHIAMAVPPKYGYGG----FPGSTHLVGRDGLCLEMSPWFNKGTY 60
           M+EIVLSI+VAFSLT H+AMAVP  YGYGG     P +THLVGRDGLCLEMSPWF +G  
Sbjct: 1   MKEIVLSIIVAFSLTTHLAMAVPSNYGYGGEYGGVPRATHLVGRDGLCLEMSPWFYRGNN 60

Query: 61  FPTRLSPCDERKKQIQLWTVLQDGTIRPMNDKYCLVSYLPVGMPTTNVIVSECDKESNPN 120
           FPTRLSPCDE KKQ QLWTV+ DGTIRPMNDK+CLV+ + VG+     +V EC KE N N
Sbjct: 61  FPTRLSPCDEHKKQTQLWTVVGDGTIRPMNDKFCLVADVLVGL-INKAVVRECAKEPNSN 120

Query: 121 KVWNHKKDGTIVHVGSGMVLTGKSNAYVSVTLEKNENVPSQSWEATESFSPMEANIKWLD 180
           K W HKKDGTI HV SGMVLTG S+    VTL+ N+N PSQSWEATES +PM ANI+WL+
Sbjct: 121 KRWTHKKDGTITHVESGMVLTGDSDY---VTLQSNKNTPSQSWEATESSTPMIANIEWLN 180

Query: 181 NLCLQSTEDSNHVGLDGCNRENKNQRWALYGDGTIRQSVNRNHCLTSKEDYGHYIVVSQC 240
           NLCLQST+DSNHVGL+GCNRENK+QRWALYGDGTIRQ+VNRN+CLTS E  G +IV+S+C
Sbjct: 181 NLCLQSTDDSNHVGLNGCNRENKDQRWALYGDGTIRQNVNRNYCLTSDEYLGRFIVMSKC 240

Query: 241 EDIPQQRWGLSAEDNTINHPANIDMVMDALSVP-FSFGQAIFMGRRDGSPSQRWII 292
           ED PQQRW L A+D+TI+HP N DMVMD L VP + F  A+   RRDGS SQRW I
Sbjct: 241 EDKPQQRWNLGAKDSTIDHP-NSDMVMDVLFVPYYDFSSAVVTNRRDGSASQRWTI 291

[Close]
BLAST of Cla013037 vs. NCBI nr
Match: gi|566006087|ref|NP_001274403.1| (uncharacterized protein LOC101221335 precursor [Cucumis sativus])

HSP 1 Score: 375.6 bits (963), Expect = 8.1e-101
Identity = 190/297 (63.97%), Postives = 225/297 (75.76%), Query Frame = 1 

Query: 1   MREIVLSIVVAFSLTAHIAMAVPPKYGYG----GFPGSTHLVGRDGLCLEMSPWFNK-GT 60
           M+EIVLSI+VAFSLT  +A+AVPP YGYG    G PG+THLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  YFPTRLSPCDERKKQIQLWTVLQDGTIRPMNDKYCLVSYLPVGMPTTNVIVSECDKESNP 120
            FPTRLSPCDE KKQ QLWT++ DGTIRPMNDK+CL + +  G+     +VSEC K S+P
Sbjct: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGV-INKAVVSECGKVSDP 120

Query: 121 NKVWNHKKDGTIVHVGSGMVLTGKSNAYVSVTLEKNENVPSQSWEATESFSPMEANIKWL 180
           NK W  K DGTI  V S MVLTG  +    VTL+ N+  PSQSWE TES + M ANI+WL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDY---VTLQSNKYTPSQSWEVTESLNSMVANIEWL 180

Query: 181 DNLCLQSTEDSNHVGLDGCNRENKNQRWALYGDGTIRQSVNRNHCLTSKEDYGHYIVVSQ 240
           +NLCLQST+DS+HVGL+GCN +NK QRWALY DGTIRQ VN+N+CLTS +D+G ++VVS+
Sbjct: 181 NNLCLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSK 240

Query: 241 CEDIPQQRWGLSAEDNTINHPANIDMVMDALSVPFS-FGQAIFMGRRDGSPSQRWII 292
           CED PQQRW L A+D TI+HP N DMV+D  SVP S F   +   RRDGS SQRW I
Sbjct: 241 CEDKPQQRWSLDAKDYTIDHP-NTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

[Close]
BLAST of Cla013037 vs. NCBI nr
Match: gi|700202446|gb|KGN57579.1| (hypothetical protein Csa_3G217160 [Cucumis sativus])

HSP 1 Score: 374.0 bits (959), Expect = 2.4e-100
Identity = 189/297 (63.64%), Postives = 224/297 (75.42%), Query Frame = 1 

Query: 1   MREIVLSIVVAFSLTAHIAMAVPPKYGYG----GFPGSTHLVGRDGLCLEMSPWFNK-GT 60
           M+EIVLSI+VAFSLT  + +AVPP YGYG    G PG+THLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  YFPTRLSPCDERKKQIQLWTVLQDGTIRPMNDKYCLVSYLPVGMPTTNVIVSECDKESNP 120
            FPTRLSPCDE KKQ QLWT++ DGTIRPMNDK+CL + +  G+     +VSEC K S+P
Sbjct: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGV-INKAVVSECGKVSDP 120

Query: 121 NKVWNHKKDGTIVHVGSGMVLTGKSNAYVSVTLEKNENVPSQSWEATESFSPMEANIKWL 180
           NK W  K DGTI  V S MVLTG  +    VTL+ N+  PSQSWE TES + M ANI+WL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDY---VTLQSNKYTPSQSWEVTESLNSMVANIEWL 180

Query: 181 DNLCLQSTEDSNHVGLDGCNRENKNQRWALYGDGTIRQSVNRNHCLTSKEDYGHYIVVSQ 240
           +NLCLQST+DS+HVGL+GCN +NK QRWALY DGTIRQ VN+N+CLTS +D+G ++VVS+
Sbjct: 181 NNLCLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSK 240

Query: 241 CEDIPQQRWGLSAEDNTINHPANIDMVMDALSVPFS-FGQAIFMGRRDGSPSQRWII 292
           CED PQQRW L A+D TI+HP N DMV+D  SVP S F   +   RRDGS SQRW I
Sbjct: 241 CEDKPQQRWSLDAKDYTIDHP-NTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

[Close]
BLAST of Cla013037 vs. NCBI nr
Match: gi|659112435|ref|XP_008456219.1| (PREDICTED: nigrin b-like [Cucumis melo])

HSP 1 Score: 350.5 bits (898), Expect = 2.8e-93
Identity = 168/250 (67.20%), Postives = 200/250 (80.00%), Query Frame = 1 

Query: 1   MREIVLSIVVAFSLTAHIAMAVPPKYGYGGFPGSTHLVGRDGLCLEMSPWFNKGTYFPTR 60
           M+E V SI+VAFSLT H+AMA+P  + +  F  +THLVGRDG CLEMS WF KG Y PTR
Sbjct: 1   MKEFVSSIIVAFSLTTHLAMAMPQLWIWR-FSVATHLVGRDGFCLEMSSWFYKGNYIPTR 60

Query: 61  LSPCDERKKQIQLWTVLQDGTIRPMNDKYCLVSYLPVGMPTTNVIVSECDKESNPNKVWN 120
           LSPCD+ KKQ Q  TVLQDGTIRPMND+YCLV Y+ V    TNV+VSEC KE N NK W 
Sbjct: 61  LSPCDKHKKQTQFRTVLQDGTIRPMNDRYCLVLYVLVNKFITNVVVSECAKEPNSNKKWT 120

Query: 121 HKKDGTIVHVGSGMVLTGKSNAYVSVTLEKNENVPSQSWEATESFSPMEANIKWLDNLCL 180
           HK+DGTIVH+GS MV+TG  +    VTL++N+N PSQSW+ATES +PM  NIKWL+NLCL
Sbjct: 121 HKEDGTIVHIGSEMVITGNLDY---VTLQRNKNAPSQSWKATESLTPMVVNIKWLENLCL 180

Query: 181 QSTEDSNHVGLDGCNRENKNQRWALYGDGTIRQSVNRNHCLTSKEDYGHYIVVSQCEDIP 240
           QSTEDSN+VGLDGCN ENK+QRWALY DGTIR+ VNRN+CLTS++  G +++VS+CED P
Sbjct: 181 QSTEDSNYVGLDGCNSENKSQRWALYSDGTIRKHVNRNYCLTSEKYSGRFVIVSKCEDKP 240

Query: 241 QQRWGLSAED 251
           QQRW L A+D
Sbjct: 241 QQRWDLGAKD 246

The following BLAST results are available for this feature:
BLAST of Cla013037 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ML3_VISAL3.6e-2431.30Beta-galactoside-specific lectin 3 OS=Viscum album PE=1 SV=2[more]
ABRA_ABRPR1.0e-2332.30Abrin-a OS=Abrus precatorius PE=1 SV=2[more]
RIP1_SAMNI1.0e-2331.40Ribosome-inactivating protein SNAI' OS=Sambucus nigra PE=1 SV=1[more]
ABRC_ABRPR1.8e-2331.52Abrin-c OS=Abrus precatorius PE=1 SV=1[more]
ABRD_ABRPR1.8e-2331.91Abrin-d OS=Abrus precatorius PE=2 SV=1[more]
BLAST of Cla013037 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L756_CUCSA3.0e-11871.67Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219180 PE=4 SV=1[more]
Q9SLV9_CUCSA5.7e-10163.97XSP30 OS=Cucumis sativus GN=XSP30 PE=2 SV=1[more]
A0A0A0L9D1_CUCSA1.6e-10063.64Uncharacterized protein OS=Cucumis sativus GN=Csa_3G217160 PE=4 SV=1[more]
A0A0A0LAC2_CUCSA3.8e-8959.60Uncharacterized protein OS=Cucumis sativus GN=Csa_3G217140 PE=4 SV=1[more]
Q58A89_SAMRA2.7e-2631.06Lectin OS=Sambucus racemosa subsp. sieboldiana GN=LecSSA-b-3a PE=2 SV=1[more]
BLAST of Cla013037 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457105|ref|XP_004146289.1|4.3e-11871.67PREDICTED: nigrin b-like [Cucumis sativus][more]
gi|659112133|ref|XP_008456079.1|1.4e-11369.93PREDICTED: nigrin b-like [Cucumis melo][more]
gi|566006087|ref|NP_001274403.1|8.1e-10163.97uncharacterized protein LOC101221335 precursor [Cucumis sativus][more]
gi|700202446|gb|KGN57579.1|2.4e-10063.64hypothetical protein Csa_3G217160 [Cucumis sativus][more]
gi|659112435|ref|XP_008456219.1|2.8e-9367.20PREDICTED: nigrin b-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000772Ricin_B_lectin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006952 defense response
biological_process GO:0017148 negative regulation of translation
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0030598 rRNA N-glycosylase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla013037Cla013037.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000772Ricin B, lectin domainPFAMPF00652Ricin_B_lectincoord: 176..289
score: 9.8E-17coord: 35..159
score: 1.5
IPR000772Ricin B, lectin domainSMARTSM00458ricin_3coord: 166..292
score: 3.4E-13coord: 31..162
score: 1.
IPR000772Ricin B, lectin domainPROFILEPS50231RICIN_B_LECTINcoord: 31..162
score: 20.898coord: 176..292
score: 25
IPR000772Ricin B, lectin domainunknownSSF50370Ricin B-like lectinscoord: 35..160
score: 1.31E-18coord: 172..291
score: 6.03
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 172..291
score: 3.1E-20coord: 37..161
score: 1.0