CSPI03G18960 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G18960
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionXSP30
LocationChr3 : 14624274 .. 14625297 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAGCCTTGTATTGTATTGTGTGTGTATATGTACCCTTCATTCTAGCCCAACTTTATCACACAAAAATCTATTATCAAATAAAGCAATCAAAAGATGAAAGAAATTGTGTTGAGCATTGTTGTAGCCTTCTCTCTCACCACCCATCTTGCCATGGCAGTGCCCTCCGACTATGGATATCAAGTCGTCCCTGGAGCCACACATCTTGTGGGTCGAGATGGATTGTGTTTGGAGATGTCTCCATGGTTTTACAAAGGTAGTAATTTTCCAACTCGATTATCACCCTGCAGCGAACAAAAGAAACAAACTCAGTTATGGACTGTTCTCCAAGATGAAACGATTCGACCAATGAATGATAGATATTGCTTGGTTTCTTACGTCTCTGTTAACTTCATAACCAATGTGGTGGTAGTAAGCGAGTGTGCTAAAGAGCCACATTCTAATAAGAAATGGATCCATAAGGAGGACAGAACCATAGTCCATGTTGGGTCAGGAATGGTTCTAACAGGAAATTCAAACTATGTGACAGTACAAAGGAACAAAAATGCACCATCACAAAGCTGGGAAGCAACGAAAAGTTTAACCCCAATGATTGCAAACATAAAATGGCTTGAAAACTTGTGTTTGCAATCGACGAAAGATTCAAATTATGTACAGTTGGATGGATGTAATAGTGAAAATAAGAGCCAACATTGGTCATTGTATGGAGATGGAACCATTAGAAAACATGTGAATAGAGACTATTGCTTGACTTCTGAACAAGATTTTGGTCGTTTTGTAGCTGTGTCTAAATGTGAAGACAAACCACAACAACGTTGGGGTCTTGGTGCTGAAGACAATACAATTAACCATCCCAATACTGACATGGTCATGGATGTGCTTAGTGTGCCTTTTGATGATCTTCCATTAGCGGTCGTTACAAACCACCGTGATGGAAGTGCTACCCAACGATGGATTATTTACTAATTAATCATATAAATAAGAAGCTAAGGGATATGTGAATAAGCACAAACTAATGCACGCAAA

mRNA sequence

ATGAAAGAAATTGTGTTGAGCATTGTTGTAGCCTTCTCTCTCACCACCCATCTTGCCATGGCAGTGCCCTCCGACTATGGATATCAAGTCGTCCCTGGAGCCACACATCTTGTGGGTCGAGATGGATTGTGTTTGGAGATGTCTCCATGGTTTTACAAAGGTAGTAATTTTCCAACTCGATTATCACCCTGCAGCGAACAAAAGAAACAAACTCAGTTATGGACTGTTCTCCAAGATGAAACGATTCGACCAATGAATGATAGATATTGCTTGGTTTCTTACGTCTCTGTTAACTTCATAACCAATGTGGTGGTAGTAAGCGAGTGTGCTAAAGAGCCACATTCTAATAAGAAATGGATCCATAAGGAGGACAGAACCATAGTCCATGTTGGGTCAGGAATGGTTCTAACAGGAAATTCAAACTATGTGACAGTACAAAGGAACAAAAATGCACCATCACAAAGCTGGGAAGCAACGAAAAGTTTAACCCCAATGATTGCAAACATAAAATGGCTTGAAAACTTGTGTTTGCAATCGACGAAAGATTCAAATTATGTACAGTTGGATGGATGTAATAGTGAAAATAAGAGCCAACATTGGTCATTGTATGGAGATGGAACCATTAGAAAACATGTGAATAGAGACTATTGCTTGACTTCTGAACAAGATTTTGGTCGTTTTGTAGCTGTGTCTAAATGTGAAGACAAACCACAACAACGTTGGGGTCTTGGTGCTGAAGACAATACAATTAACCATCCCAATACTGACATGGTCATGGATGTGCTTAGTGTGCCTTTTGATGATCTTCCATTAGCGGTCGTTACAAACCACCGTGATGGAAGTGCTACCCAACGATGGATTATTTACTAA

Coding sequence (CDS)

ATGAAAGAAATTGTGTTGAGCATTGTTGTAGCCTTCTCTCTCACCACCCATCTTGCCATGGCAGTGCCCTCCGACTATGGATATCAAGTCGTCCCTGGAGCCACACATCTTGTGGGTCGAGATGGATTGTGTTTGGAGATGTCTCCATGGTTTTACAAAGGTAGTAATTTTCCAACTCGATTATCACCCTGCAGCGAACAAAAGAAACAAACTCAGTTATGGACTGTTCTCCAAGATGAAACGATTCGACCAATGAATGATAGATATTGCTTGGTTTCTTACGTCTCTGTTAACTTCATAACCAATGTGGTGGTAGTAAGCGAGTGTGCTAAAGAGCCACATTCTAATAAGAAATGGATCCATAAGGAGGACAGAACCATAGTCCATGTTGGGTCAGGAATGGTTCTAACAGGAAATTCAAACTATGTGACAGTACAAAGGAACAAAAATGCACCATCACAAAGCTGGGAAGCAACGAAAAGTTTAACCCCAATGATTGCAAACATAAAATGGCTTGAAAACTTGTGTTTGCAATCGACGAAAGATTCAAATTATGTACAGTTGGATGGATGTAATAGTGAAAATAAGAGCCAACATTGGTCATTGTATGGAGATGGAACCATTAGAAAACATGTGAATAGAGACTATTGCTTGACTTCTGAACAAGATTTTGGTCGTTTTGTAGCTGTGTCTAAATGTGAAGACAAACCACAACAACGTTGGGGTCTTGGTGCTGAAGACAATACAATTAACCATCCCAATACTGACATGGTCATGGATGTGCTTAGTGTGCCTTTTGATGATCTTCCATTAGCGGTCGTTACAAACCACCGTGATGGAAGTGCTACCCAACGATGGATTATTTACTAA
Homology
[Close]
BLAST of CSPI03G18960 vs. Swiss-Prot
Match: RIP1_SAMNI (Ribosome-inactivating protein SNAI' OS=Sambucus nigra PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28
Identity = 85/258 (32.95%), Postives = 132/258 (51.16%), Query Frame = 1 

Query: 39  GRDGLCLEMSPWFYKGSNFPTRLSPCSEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVN 98
           GRDG C E+     K    P +LS C EQ  Q   WT   D TI+ +    CL +  SV 
Sbjct: 323 GRDGFCAEVKNGDEKDGT-PVQLSSCGEQSNQQ--WTFSTDGTIQSLGK--CLTTSSSV- 382

Query: 99  FITNVVVVSECAKEPHSNKKWIHKEDRTIVHVGSGMVLTG----NSNYVTVQRNKNAPSQ 158
                 ++  C   P  + KW+   D TI +  SG+VLT         V++++N +A  Q
Sbjct: 383 ------MIYNCKVVPPESTKWVVSIDGTITNPRSGLVLTAPKAAEGTLVSLEKNVHAARQ 442

Query: 159 SWEATKSLTPMIANIKWLENLCLQSTKDSNYVQLDGCNSENKS---QHWSLYGDGTIRKH 218
            W    ++ P++  I   E +CL++   +N V L  C+ ++ S   Q W+LYGDGTIR +
Sbjct: 443 GW-IVGNVEPLVTFIVGYEQMCLETNPGNNDVSLGDCSVKSASKVDQKWALYGDGTIRVN 502

Query: 219 VNRDYCLTSE-QDFGRFVAVSKCEDKPQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLP 278
            +R  C+TSE +     + + KC     QRW     D TI++P++ +VM    V  +D+P
Sbjct: 503 NDRSLCVTSEGKSSNEPIIILKCLGWANQRWVFNT-DGTISNPDSKLVM---HVDQNDVP 562

Query: 279 L-AVVTNHRDGSATQRWI 288
           L  ++ +H  G++ Q+WI
Sbjct: 563 LRKIILSHPSGTSNQQWI 563

[Close]
BLAST of CSPI03G18960 vs. Swiss-Prot
Match: AGGL_RICCO (Agglutinin OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.3e-28
Identity = 88/258 (34.11%), Postives = 134/258 (51.94%), Query Frame = 1 

Query: 37  LVGRDGLCLEMS-PWFYKGSNFPTRLSPCSEQKKQTQLWTVLQDETIRPMNDRYCLVSYV 96
           +VGR+GLC++++   F+ G+  P +L PC       QLWT+ +D TIR  ++  CL   +
Sbjct: 315 IVGRNGLCVDVTGEEFFDGN--PIQLWPCKSNTDWNQLWTLRKDSTIR--SNGKCLT--I 374

Query: 97  SVNFITNVVVVSECAKEPHSNKKWIHKEDRTIVHVGSGMVL---TGNSNY-VTVQRNKNA 156
           S +     VV+  C+       +W   ++RTI++  SG+VL   +GNS   +TVQ N  A
Sbjct: 375 SKSSPRQQVVIYNCSTATVGATRWQIWDNRTIINPRSGLVLAATSGNSGTKLTVQTNIYA 434

Query: 157 PSQSWEATKSLTPMIANIKWLENLCLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKH 216
            SQ W  T +  P +  I  L  +CLQ+  +S  V L+ C SE   Q W+LY DG+IR  
Sbjct: 435 VSQGWLPTNNTQPFVTTIVGLYGMCLQA--NSGKVWLEDCTSEKAEQQWALYADGSIRPQ 494

Query: 217 VNRDYCLTSEQDF-GRFVAVSKCEDKPQ-QRWGLGAEDNTINHPNTDMVMDVLSVPFDDL 276
            NRD CLT++ +  G  V +  C      QRW +   D TI +    +V+DV     D  
Sbjct: 495 QNRDNCLTTDANIKGTVVKILSCGPASSGQRW-MFKNDGTILNLYNGLVLDVRR--SDPS 554

Query: 277 PLAVVTNHRDGSATQRWI 288
              ++ +   G+  Q W+
Sbjct: 555 LKQIIVHPFHGNLNQIWL 561

[Close]
BLAST of CSPI03G18960 vs. Swiss-Prot
Match: RICI_RICCO (Ricin OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.5e-25
Identity = 80/232 (34.48%), Postives = 121/232 (52.16%), Query Frame = 1 

Query: 37  LVGRDGLCLEMSPWFYKGSNFPTRLSPCSEQKKQTQLWTVLQDETIRPMNDRYCLVSYVS 96
           +VGR+GLC+++    +   N   +L PC       QLWT+ +D TIR  ++  CL +Y  
Sbjct: 327 IVGRNGLCVDVRDGRFHNGN-AIQLWPCKSNTDANQLWTLKRDNTIR--SNGKCLTTY-- 386

Query: 97  VNFITNV-VVVSECAKEPHSNKKWIHKEDRTIVHVGSGMVL---TGNSNY-VTVQRNKNA 156
             +   V V++ +C        +W   ++ TI++  S +VL   +GNS   +TVQ N  A
Sbjct: 387 -GYSPGVYVMIYDCNTAATDATRWQIWDNGTIINPRSSLVLAATSGNSGTTLTVQTNIYA 446

Query: 157 PSQSWEATKSLTPMIANIKWLENLCLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKH 216
            SQ W  T +  P +  I  L  LCLQ+  +S  V ++ C+SE   Q W+LY DG+IR  
Sbjct: 447 VSQGWLPTNNTQPFVTTIVGLYGLCLQA--NSGQVWIEDCSSEKAEQQWALYADGSIRPQ 506

Query: 217 VNRDYCLTSEQDFGR-FVAVSKCEDKPQ-QRWGLGAEDNTINHPNTDMVMDV 262
            NRD CLTS+ +     V +  C      QRW +   D TI +  + +V+DV
Sbjct: 507 QNRDNCLTSDSNIRETVVKILSCGPASSGQRW-MFKNDGTILNLYSGLVLDV 549

[Close]
BLAST of CSPI03G18960 vs. Swiss-Prot
Match: AGGL_ABRPR (Agglutinin-1 OS=Abrus precatorius GN=AAG PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.5e-25
Identity = 81/254 (31.89%), Postives = 124/254 (48.82%), Query Frame = 1 

Query: 39  GRDGLCLEMSPWFYKGSNFPTRLSPCSEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVN 98
           GRDGLC+++S   Y   N P  L  C +Q +  QLWT+  D+TIR      CL +Y    
Sbjct: 300 GRDGLCVDVSDNAYNNGN-PIILWKCKDQLEVNQLWTLKSDKTIRSKGK--CLTTYGYAP 359

Query: 99  FITNVVVVSECAKEPHSNKKWIHKEDRTIVHVGSGMVLTGNSNYV----TVQRNKNAPSQ 158
              N V++ +C+        W   ++ TI++  SG+VL+  S+ +    TVQ+N     Q
Sbjct: 360 --GNYVMIYDCSSAVAEATYWDIWDNGTIINPKSGLVLSAESSSMGGTLTVQKNDYRMRQ 419

Query: 159 SWEATKSLTPMIANIKWLENLCLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNR 218
            W      +P + +I     LC+++    N + LD C+   + Q W++Y DG+IR   N 
Sbjct: 420 GWRTGNDTSPFVTSIAGFFKLCMEA--HGNSMWLDVCDITKEEQQWAVYPDGSIRPVQNT 479

Query: 219 DYCLTSEQ-DFGRFVAVSKCEDK-PQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLA 278
           + CLT E+   G  + +  C +    QRW +   D TI +   DMVMDV S   D     
Sbjct: 480 NNCLTCEEHKQGATIVMMGCSNAWASQRW-VFKSDGTIYNLYDDMVMDVKS--SDPSLKQ 539

Query: 279 VVTNHRDGSATQRW 287
           ++     G+A Q W
Sbjct: 540 IILWPYTGNANQMW 543

[Close]
BLAST of CSPI03G18960 vs. Swiss-Prot
Match: SGSL_TRIAN (Seed lectin (Fragments) OS=Trichosanthes anguina PE=1 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 3.6e-24
Identity = 76/264 (28.79%), Postives = 126/264 (47.73%), Query Frame = 1 

Query: 35  THLVGRDGLCLEMSPWFYKGSNFPTRLSPCSEQKKQTQLWTVLQDETIRPMNDRYCLVSY 94
           T + GRD LC++++       +    L PC +Q  Q   WT   D T+R +    CL + 
Sbjct: 265 TRISGRDALCVDVAGALTSDGS-RLILYPCGQQVNQK--WTFHSDGTVRSLGK--CLATN 324

Query: 95  VSVNFITNVVVVSECAKEPHSNKKWIHKEDRTIVHVG-SGMVLTGN----SNYVTVQRNK 154
            S     N+VV+ +C+K    +  W      TI++     + LT N    S  +T++ N 
Sbjct: 325 NSK--FGNLVVIYDCSKLAAEDISWDVSVGGTIMNPNYEDLALTSNKATRSTNLTMEVNT 384

Query: 155 NAPSQSWEATKSLTPMIANIKWLENLCLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIR 214
            + SQ W     + P+I +I  L+++CL++T  +  + L+ C    + Q W+LY DGTIR
Sbjct: 385 YSASQGWRVGNYVQPIIGSIVGLDDMCLEATDGNTNMWLEECVPNQREQSWALYSDGTIR 444

Query: 215 KHVNRDYCLT---SEQDFGRFVAVSKCEDKPQQRWGLGAEDNTINHPNTDMVMDVLSVPF 274
              NR+ C+T   S  D  + + +  C+    QRW   A+ +     N  + MDV     
Sbjct: 445 VDDNRELCVTASSSTYDNWKVITILNCDGSNNQRWVFLADGSISTPGNQRLAMDVAR--- 504

Query: 275 DDLPLAVVTNHR-DGSATQRWIIY 290
            D+ L  +  HR  G   Q+W+++
Sbjct: 505 SDVDLKKIILHRPHGDLNQQWVLF 518

[Close]
BLAST of CSPI03G18960 vs. TrEMBL
Match: A0A0A0L756_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219180 PE=4 SV=1)

HSP 1 Score: 596.7 bits (1537), Expect = 1.6e-167
Identity = 284/289 (98.27%), Postives = 288/289 (99.65%), Query Frame = 1 

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTR 60
           MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTR
Sbjct: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTR 60

Query: 61  LSPCSEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVVSECAKEPHSNKKWI 120
           LSPC+EQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVV SECAKEPHSNKKWI
Sbjct: 61  LSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVV-SECAKEPHSNKKWI 120

Query: 121 HKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMIANIKWLENLCLQST 180
           HKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPM+ANIKWLENLCLQST
Sbjct: 121 HKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLCLQST 180

Query: 181 KDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRDYCLTSEQDFGRFVAVSKCEDKPQQR 240
           KDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNR+YCLTSEQDFGRFVAVSKCEDKPQQR
Sbjct: 181 KDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDKPQQR 240

Query: 241 WGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGSATQRWIIY 290
           WGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDG+ATQRWIIY
Sbjct: 241 WGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWIIY 288

[Close]
BLAST of CSPI03G18960 vs. TrEMBL
Match: Q9SLV9_CUCSA (XSP30 OS=Cucumis sativus GN=XSP30 PE=2 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 8.7e-110
Identity = 200/293 (68.26%), Postives = 230/293 (78.50%), Query Frame = 1 

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEMSPWFYK-GS 60
           MKEIVLSI+VAFSLTT LA+AVP +YGY V    VPGATHLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  NFPTRLSPCSEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVVSECAKEPHS 120
           NFPTRLSPC E KKQTQLWT++ D TIRPMND++CL + V    I N  VVSEC K    
Sbjct: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVI-NKAVVSECGKVSDP 120

Query: 121 NKKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMIANIKWLENL 180
           NKKW  K D TI  V S MVLTG+ +YVT+Q NK  PSQSWE T+SL  M+ANI+WL NL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180

Query: 181 CLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRDYCLTSEQDFGRFVAVSKCED 240
           CLQST DS++V L+GCN++NK Q W+LY DGTIR+HVN++YCLTS+QDFGRFV VSKCED
Sbjct: 181 CLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCED 240

Query: 241 KPQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGSATQRWII 289
           KPQQRW L A+D TI+HPNTDMV+DV SVP    P  +VTN RDGSA+QRW I
Sbjct: 241 KPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

[Close]
BLAST of CSPI03G18960 vs. TrEMBL
Match: A0A0A0L9D1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G217160 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 2.5e-109
Identity = 199/293 (67.92%), Postives = 229/293 (78.16%), Query Frame = 1 

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEMSPWFYK-GS 60
           MKEIVLSI+VAFSLTT L +AVP +YGY V    VPGATHLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  NFPTRLSPCSEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVVSECAKEPHS 120
           NFPTRLSPC E KKQTQLWT++ D TIRPMND++CL + V    I N  VVSEC K    
Sbjct: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVI-NKAVVSECGKVSDP 120

Query: 121 NKKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMIANIKWLENL 180
           NKKW  K D TI  V S MVLTG+ +YVT+Q NK  PSQSWE T+SL  M+ANI+WL NL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180

Query: 181 CLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRDYCLTSEQDFGRFVAVSKCED 240
           CLQST DS++V L+GCN++NK Q W+LY DGTIR+HVN++YCLTS+QDFGRFV VSKCED
Sbjct: 181 CLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCED 240

Query: 241 KPQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGSATQRWII 289
           KPQQRW L A+D TI+HPNTDMV+DV SVP    P  +VTN RDGSA+QRW I
Sbjct: 241 KPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

[Close]
BLAST of CSPI03G18960 vs. TrEMBL
Match: A0A0A0LAC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G217140 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.3e-102
Identity = 194/293 (66.21%), Postives = 224/293 (76.45%), Query Frame = 1 

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEM---SPWFYK 60
           MKEIVLSI+VAFSLTT L +AVP +YGY V    VPGATHLVGRDGLCLEM     +   
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60

Query: 61  GSNFPTRLSPCSEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVVSECAKEP 120
           G NFPTRL PC E KKQTQLWTV+ D TIRPMNDR+CL + V    I N  VVSEC K  
Sbjct: 61  GINFPTRLLPCDE-KKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVI-NKAVVSECGKVS 120

Query: 121 HSNKKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMIANIKWLE 180
            SNK+WIHK D TI    S MVLTG+S+YVT+Q  K  PSQSWE T+SL PM+ANI+WL 
Sbjct: 121 DSNKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLN 180

Query: 181 NLCLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRDYCLTSEQDFGRFVAVSKC 240
           NLCLQST DS+ V L+GCN+  K Q W+LY DGTIR+HVNR+YCLTSEQ++ R V VSKC
Sbjct: 181 NLCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKC 240

Query: 241 EDKPQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGSATQRW 287
           EDKPQQRW L A+D+TI+HPNT+MV+DVL+V     PL +VTNH DGSA+QRW
Sbjct: 241 EDKPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRW 291

[Close]
BLAST of CSPI03G18960 vs. TrEMBL
Match: B5WYH8_SAMEB (rRNA N-glycosylase (Fragment) OS=Sambucus ebulus GN=ar PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.2e-28
Identity = 85/264 (32.20%), Postives = 134/264 (50.76%), Query Frame = 1 

Query: 30  VVPGATHLVGRDGLCLEMSPWFYKGSNFPTRLSPCSEQKKQTQLWTVLQDETIRPMNDRY 89
           VV     + G DGLC+++S   Y   N P +LSPC  Q   TQ WT   D TIR +    
Sbjct: 287 VVEVTRRISGWDGLCVDVSDDHYIDGN-PVQLSPCGNQC--TQQWTFRTDGTIRWLGK-- 346

Query: 90  CLVSYVSVNFITNVVVVSECAKEPHSNKKWIHKEDRTIVHVGSGMVLTG----NSNYVTV 149
           CL +  SV       ++++C   P  + KW+   D TI +  SG+VLT         ++ 
Sbjct: 347 CLTASSSV-------MINDCNTVPPEDTKWVVSIDGTITNPSSGLVLTAPQTLEGTALSP 406

Query: 150 QRNKNAPSQSWEATKSLTPMIANIKWLENLCLQSTKDSNYVQLDGCNSENKSQHWSLYGD 209
           + N +A  Q W     + P++ +I   + +CL+   ++N+V ++ C      Q W+LYGD
Sbjct: 407 ENNIHAAIQGW-TVGDVEPLVTSIVGYKQMCLREDGENNFVWMEHCVLNRTEQEWALYGD 466

Query: 210 GTIRKHVNRDYCLTSE-QDFGRFVAVSKCEDKPQQRWGLGAEDNTINHPNTDMVMDVLSV 269
           GTIR + NR  C+TS+  +    + + KC+    QRW     + TI++PNT  VMDV   
Sbjct: 467 GTIRVNSNRSLCVTSQYHEPSDLIIILKCQGSSNQRWVFNT-NGTISNPNTTKVMDVAQA 526

Query: 270 PFDDLPLAVVTNHR-DGSATQRWI 288
              ++ L  +  +R +G +  +WI
Sbjct: 527 ---NVSLRKIILYRPNGESNHQWI 533

[Close]
BLAST of CSPI03G18960 vs. NCBI nr
Match: gi|449457105|ref|XP_004146289.1| (PREDICTED: nigrin b-like [Cucumis sativus])

HSP 1 Score: 596.7 bits (1537), Expect = 2.2e-167
Identity = 284/289 (98.27%), Postives = 288/289 (99.65%), Query Frame = 1 

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTR 60
           MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTR
Sbjct: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTR 60

Query: 61  LSPCSEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVVSECAKEPHSNKKWI 120
           LSPC+EQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVV SECAKEPHSNKKWI
Sbjct: 61  LSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVV-SECAKEPHSNKKWI 120

Query: 121 HKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMIANIKWLENLCLQST 180
           HKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPM+ANIKWLENLCLQST
Sbjct: 121 HKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLCLQST 180

Query: 181 KDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRDYCLTSEQDFGRFVAVSKCEDKPQQR 240
           KDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNR+YCLTSEQDFGRFVAVSKCEDKPQQR
Sbjct: 181 KDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDKPQQR 240

Query: 241 WGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGSATQRWIIY 290
           WGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDG+ATQRWIIY
Sbjct: 241 WGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWIIY 288

[Close]
BLAST of CSPI03G18960 vs. NCBI nr
Match: gi|659112133|ref|XP_008456079.1| (PREDICTED: nigrin b-like [Cucumis melo])

HSP 1 Score: 454.5 bits (1168), Expect = 1.4e-124
Identity = 217/292 (74.32%), Postives = 249/292 (85.27%), Query Frame = 1 

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEMSPWFYKGSN 60
           MKEIVLSI+VAFSLTTHLAMAVPS+YGY      VP ATHLVGRDGLCLEMSPWFY+G+N
Sbjct: 1   MKEIVLSIIVAFSLTTHLAMAVPSNYGYGGEYGGVPRATHLVGRDGLCLEMSPWFYRGNN 60

Query: 61  FPTRLSPCSEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVVSECAKEPHSN 120
           FPTRLSPC E KKQTQLWTV+ D TIRPMND++CLV+ V V  I N  VV ECAKEP+SN
Sbjct: 61  FPTRLSPCDEHKKQTQLWTVVGDGTIRPMNDKFCLVADVLVGLI-NKAVVRECAKEPNSN 120

Query: 121 KKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMIANIKWLENLC 180
           K+W HK+D TI HV SGMVLTG+S+YVT+Q NKN PSQSWEAT+S TPMIANI+WL NLC
Sbjct: 121 KRWTHKKDGTITHVESGMVLTGDSDYVTLQSNKNTPSQSWEATESSTPMIANIEWLNNLC 180

Query: 181 LQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRDYCLTSEQDFGRFVAVSKCEDK 240
           LQST DSN+V L+GCN ENK Q W+LYGDGTIR++VNR+YCLTS++  GRF+ +SKCEDK
Sbjct: 181 LQSTDDSNHVGLNGCNRENKDQRWALYGDGTIRQNVNRNYCLTSDEYLGRFIVMSKCEDK 240

Query: 241 PQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGSATQRWII 289
           PQQRW LGA+D+TI+HPN+DMVMDVL VP+ D   AVVTN RDGSA+QRW I
Sbjct: 241 PQQRWNLGAKDSTIDHPNSDMVMDVLFVPYYDFSSAVVTNRRDGSASQRWTI 291

[Close]
BLAST of CSPI03G18960 vs. NCBI nr
Match: gi|566006087|ref|NP_001274403.1| (uncharacterized protein LOC101221335 precursor [Cucumis sativus])

HSP 1 Score: 404.8 bits (1039), Expect = 1.2e-109
Identity = 200/293 (68.26%), Postives = 230/293 (78.50%), Query Frame = 1 

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEMSPWFYK-GS 60
           MKEIVLSI+VAFSLTT LA+AVP +YGY V    VPGATHLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  NFPTRLSPCSEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVVSECAKEPHS 120
           NFPTRLSPC E KKQTQLWT++ D TIRPMND++CL + V    I N  VVSEC K    
Sbjct: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVI-NKAVVSECGKVSDP 120

Query: 121 NKKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMIANIKWLENL 180
           NKKW  K D TI  V S MVLTG+ +YVT+Q NK  PSQSWE T+SL  M+ANI+WL NL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180

Query: 181 CLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRDYCLTSEQDFGRFVAVSKCED 240
           CLQST DS++V L+GCN++NK Q W+LY DGTIR+HVN++YCLTS+QDFGRFV VSKCED
Sbjct: 181 CLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCED 240

Query: 241 KPQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGSATQRWII 289
           KPQQRW L A+D TI+HPNTDMV+DV SVP    P  +VTN RDGSA+QRW I
Sbjct: 241 KPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

[Close]
BLAST of CSPI03G18960 vs. NCBI nr
Match: gi|700202446|gb|KGN57579.1| (hypothetical protein Csa_3G217160 [Cucumis sativus])

HSP 1 Score: 403.3 bits (1035), Expect = 3.6e-109
Identity = 199/293 (67.92%), Postives = 229/293 (78.16%), Query Frame = 1 

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEMSPWFYK-GS 60
           MKEIVLSI+VAFSLTT L +AVP +YGY V    VPGATHLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  NFPTRLSPCSEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVVSECAKEPHS 120
           NFPTRLSPC E KKQTQLWT++ D TIRPMND++CL + V    I N  VVSEC K    
Sbjct: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVI-NKAVVSECGKVSDP 120

Query: 121 NKKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMIANIKWLENL 180
           NKKW  K D TI  V S MVLTG+ +YVT+Q NK  PSQSWE T+SL  M+ANI+WL NL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180

Query: 181 CLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRDYCLTSEQDFGRFVAVSKCED 240
           CLQST DS++V L+GCN++NK Q W+LY DGTIR+HVN++YCLTS+QDFGRFV VSKCED
Sbjct: 181 CLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCED 240

Query: 241 KPQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGSATQRWII 289
           KPQQRW L A+D TI+HPNTDMV+DV SVP    P  +VTN RDGSA+QRW I
Sbjct: 241 KPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

[Close]
BLAST of CSPI03G18960 vs. NCBI nr
Match: gi|659112435|ref|XP_008456219.1| (PREDICTED: nigrin b-like [Cucumis melo])

HSP 1 Score: 392.9 bits (1008), Expect = 4.9e-106
Identity = 194/248 (78.23%), Postives = 214/248 (86.29%), Query Frame = 1 

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTR 60
           MKE V SI+VAFSLTTHLAMA+P  + ++    ATHLVGRDG CLEMS WFYKG+  PTR
Sbjct: 1   MKEFVSSIIVAFSLTTHLAMAMPQLWIWRFSV-ATHLVGRDGFCLEMSSWFYKGNYIPTR 60

Query: 61  LSPCSEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVN-FITNVVVVSECAKEPHSNKKW 120
           LSPC + KKQTQ  TVLQD TIRPMNDRYCLV YV VN FITN VVVSECAKEP+SNKKW
Sbjct: 61  LSPCDKHKKQTQFRTVLQDGTIRPMNDRYCLVLYVLVNKFITN-VVVSECAKEPNSNKKW 120

Query: 121 IHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMIANIKWLENLCLQS 180
            HKED TIVH+GS MV+TGN +YVT+QRNKNAPSQSW+AT+SLTPM+ NIKWLENLCLQS
Sbjct: 121 THKEDGTIVHIGSEMVITGNLDYVTLQRNKNAPSQSWKATESLTPMVVNIKWLENLCLQS 180

Query: 181 TKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRDYCLTSEQDFGRFVAVSKCEDKPQQ 240
           T+DSNYV LDGCNSENKSQ W+LY DGTIRKHVNR+YCLTSE+  GRFV VSKCEDKPQQ
Sbjct: 181 TEDSNYVGLDGCNSENKSQRWALYSDGTIRKHVNRNYCLTSEKYSGRFVIVSKCEDKPQQ 240

Query: 241 RWGLGAED 248
           RW LGA+D
Sbjct: 241 RWDLGAKD 246

The following BLAST results are available for this feature:
BLAST of CSPI03G18960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RIP1_SAMNI1.4e-2832.95Ribosome-inactivating protein SNAI' OS=Sambucus nigra PE=1 SV=1[more]
AGGL_RICCO5.3e-2834.11Agglutinin OS=Ricinus communis PE=1 SV=1[more]
RICI_RICCO5.5e-2534.48Ricin OS=Ricinus communis PE=1 SV=1[more]
AGGL_ABRPR5.5e-2531.89Agglutinin-1 OS=Abrus precatorius GN=AAG PE=1 SV=1[more]
SGSL_TRIAN3.6e-2428.79Seed lectin (Fragments) OS=Trichosanthes anguina PE=1 SV=2[more]
BLAST of CSPI03G18960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L756_CUCSA1.6e-16798.27Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219180 PE=4 SV=1[more]
Q9SLV9_CUCSA8.7e-11068.26XSP30 OS=Cucumis sativus GN=XSP30 PE=2 SV=1[more]
A0A0A0L9D1_CUCSA2.5e-10967.92Uncharacterized protein OS=Cucumis sativus GN=Csa_3G217160 PE=4 SV=1[more]
A0A0A0LAC2_CUCSA1.3e-10266.21Uncharacterized protein OS=Cucumis sativus GN=Csa_3G217140 PE=4 SV=1[more]
B5WYH8_SAMEB2.2e-2832.20rRNA N-glycosylase (Fragment) OS=Sambucus ebulus GN=ar PE=4 SV=1[more]
BLAST of CSPI03G18960 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G18960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457105|ref|XP_004146289.1|2.2e-16798.27PREDICTED: nigrin b-like [Cucumis sativus][more]
gi|659112133|ref|XP_008456079.1|1.4e-12474.32PREDICTED: nigrin b-like [Cucumis melo][more]
gi|566006087|ref|NP_001274403.1|1.2e-10968.26uncharacterized protein LOC101221335 precursor [Cucumis sativus][more]
gi|700202446|gb|KGN57579.1|3.6e-10967.92hypothetical protein Csa_3G217160 [Cucumis sativus][more]
gi|659112435|ref|XP_008456219.1|4.9e-10678.23PREDICTED: nigrin b-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000772Ricin_B_lectin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G18960.1CSPI03G18960.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000772Ricin B, lectin domainPFAMPF00652Ricin_B_lectincoord: 173..286
score: 2.8E-19coord: 36..156
score: 1.2
IPR000772Ricin B, lectin domainSMARTSM00458ricin_3coord: 163..289
score: 3.3E-14coord: 32..159
score: 4.
IPR000772Ricin B, lectin domainPROFILEPS50231RICIN_B_LECTINcoord: 162..289
score: 26.533coord: 31..159
score: 19
IPR000772Ricin B, lectin domainunknownSSF50370Ricin B-like lectinscoord: 169..288
score: 1.81E-24coord: 30..157
score: 1.27
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 36..158
score: 6.2E-17coord: 169..288
score: 2.5