Carg26422 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAAACGAGACAAGTCGTGTTGTGTATGGTCGTGGCATTCTCCCTCGCCACCCACATCAGCACCGCCCTCGGGTACGGAGCGTTCGGAGGACGCGCACATCTTTTGGGTCGAGATGGGTTGTGTTTACAGACAGCGCCGCTTTCCATATATTACACTCCAACTAAATTAACAATCTGCGATGAATCAGAGTCGGACCAATTATGGGCGATCGTTGACGATGGCACGATTCGGGCAGATAATGATAGAAGTTGTTTGGTTCCTCATAGTCGGGGTATTAAACCCATTGGAACCAATGTCGTACTAGTAGACTGTACGAAAGAGATAAGAAGTGACATGAAATGGACTAAAACGAACGATGGAACCATACATCACGACGAGTCGGGACTCGTCTTGACGGGGAAACAAGGCCAGTATGTGTCGTTGGAAGTCGATGAAGGTGCGCCGTCGCAGGGGTGGGAAGCCACGGAACGGCCCTACCCAAAGGCGGCCAACATCAAGTGGCATAACAACTTGTGTCTACAATTTGGTGATGGTGAATTTTCGTTGGGGTTGAGTGCGTGTAGTAGCAAATATGATAAGAGGCAGCGATGGGTGCTGTATGGGGATGGCACCATTCGAGGCAATGGCGATAGCAACGTCTGCTTGACTTCGCTCTTAAGCTCTTCGGTGGTTGTGTCTAAGTGCGCAGACATGCCACAACAGCGTTGGGCGCTTGCAGCGGACAACACCATCGGCCATCCCAACACCAACTTGGTCATGGATGCGCGTACGTTTGTGCGTCTCTCGCCAATGGTCCTGGTTGCCAAGCGCGCTGGGACTGATAGCCAACGATGGATCGTTTATTGAATAATATGTAAATAATGAATGTATGAATCCACGCAACGATAAACATTAATAAATAAAGTGTGGACATGTTTTCCCGTCGTACTTGAATTATACAGGGATGTGATTAGTTGTCAATTACTTATACTATTGCTTTTTAAATCTTTCTCGGGATGGAGGCTTAAACATATGTTGTCTGTGTCAATGATGACCCATGTTTTGTTGGTGACTTACTTGAGGGCGAGAGTATGTTTCGACGAACGAATAATATGATAATTGCTTATGCCGACCTTTCGAGAGATGATCCAAGTAGGCAGTTAGCTCGATGACGTTACATTCATTGAATTGTTATTTGGTTGTTGTCAATTAGGTCATGGTGTCGTTGGTTAAGCACCATGTGGTCGATTGTACACAAAGTTGAACGTTATGCTTGTGTTGTTGATCTCTTGGGTCAAGTGGGGAGATTAGAGGAATGACAATGCTACCAAGACTGAGCATCTGGGGTTCGCTACTAGCTGCGAAAATATGGCAATCACTACCCTTGCATAATCACTACCCCTAAAAGTAAAGTTACGAGAGCTCATGTTTAAAGTGGACAATATTAGTACCAATGTGGAGGGTTATTGTTCGTATCTCATGAGTGTTCTTCGATAATGATACAGTAACCTACCAACTGGATCTTAATTAAGATGATTTCATCCTAGATGATATGAAATTTTTAAAATTTTGATTTAATAAAAAATCAACCTATCTGAATCTGTGTTGATTAAATATTTCAGATCAAAAAATTTGTTTGAGATTTGAATTATTCTACGAACACGAACATGGATTAAAAACGTAAACCATAATTTTTTTTTTTTTTTTTTTTTTTATAACCACAATTCCACCCAAAACCTTCCACTTCAAGAATGGATTATTTGTCATAACCCATTCGCTCCTAAAAAAATACTTTTTACCTTCTCCAATAATTTAAATATATGTTAAAAAATTTATGACTCGAAATGATTAAAGTTGAATTATCAATAAATTAAAATTTTATGAATTTTATTATATATATTTATTATGATTTTATTTAACATTTTATGACTTTTGATCGTTTAATAGAATCCATTTTAATAATTATTTGTTCTATATTTAAAATTCACATAGGTTTCTTCTATTCTAATTATTTAAATCTTTATGCAAAAATACTTTGCATTAAATTATAAATTAACCAATTTAATATTTACATATGTTGAGCGTAAATGATCATAATTATCTTATTTTTATTGGAAATTCCCTCATTATTTTGTAATTTTTCTAAACAAATAAATGATCACATAATTAATATCAATTCTTTTTTATATAATTTATCATAAATAAAATGAAAATAATTTAAAACTTTAAAAAAATTTCAATAATATTTTTAATTCTTTATAAGTTAATATTTTATTTAAAAATACCTAACAAAAATACCATCATCTTATAAATATTTTTTAATACCCTTATAAAAAAACCTTTAAACTTTTTAAAAAATATCTATAAACTTTTAAAAAAATTAATATTAATATAAATTTTTAGATTTTTTTTATTATTTTAAAGTTACCTTAAAATAAAAAATGAAAATAATCTATTTTTTTTTAAAACACATTAAAAATTAAAATTTTAACGGTATTTTTTAAACAAAATATTAAAAAAAATCATCCAAAATTATTTTTTTAAAAAAGAAAAATTTTAATTTAAGAATATAATATTATGATATTATATATTATATTACTATTATTATTATATTAGAGAAAGTTTTTTTAATTTTTTTTTAATTTCATCTAAAAAACATGCACCTCAACAACGGGAAAGTAAATGCGGTTGCATATATAATATAGTATTCTATACTTTATATATATTATAATTATATATATCTCACCTTATCTTGATATATTATTTTTTTTTTTTTACAATTATCTTATTTTTAATTTTCATTTCTTTAATAAAAAATATGGGCACCTTCAACCATGGGAAGTAAAGTGGGCTTGATTTACATATATTTATATTTATATATCTTATCTATTATAGATATTTTTTTAATCTTTTATTTTTCATTACTTAATAAAAAGGGCCACCTCAACCATTGAGAGTAGATATAGTGATGTAGAATGGGTTGTGATTCATCATTCGCACTTACCACTATATTTTATTTCGATTTAGGATTGCGAATAAATATCCATCCTCCATGAATGGTGTTAAAGTATTTCACACTATATGATTTATCATCCAATAAATTGGGAGATTTTTCACTATGTTTTTAGATGATACTATAAAATAACCCTTCATTTCATCTCATCTTTCTCACCCTTTACTCAGCTCTAATAATCAAAATGGACAATGATAATCCACAAGTTCACTCTTCTGGCATGTGCACCATTCCAGCATTCATCCTACACCCACCACCGCCAATGCCACACGGCCACGCCACCCGGAAAAACTACGGATCGTATGTCGAGATCCCGCACACATACTTGTCAAAGGTACAAACGGTATATATTGTGTTATTAAACCAACACTTGGCGATTTTTCGAGATATTATTAATCCAAAACTGACTGTCACCTATGCGAACACAATAGGAAATCGATTCCCAACTATTGGCAGATCCTATAGAAGATGGCACGAAATACGAATCAAGTAACAGATTCTATTATGGTTCCTCAAATTCTCAAATCCACTTGAAGACGTTCGGAGCCACAATGTAAACGTTAAAAGCAAATCGGACAAAAGCTCAAAGTAGAATAGAACAACGACATGAATATGGACCAAAAACAAGGACGAAACACGGAAAATCCACTACACCAATGACGAGTCGTGGACTCGGTCTTGACCGCATGAAACACAGGGAGAAAACAGGTACGGATGTACGAAAAAGAAGTACACACAAAATAGAAAAAAAAATTACCAATCACAAAGATGGAGAAAAGCCACAGAAGACCATATTATTAACACAAATTGGATGGCTAAGAATATTCAAATGGCATTTGATAAACTTGATGTTTGAAAATCTATAGAAGAGATGAAAATTCGATATGTGACAGAAAATTGAAAAATATGAGAAGTGTAGCCGAGGATGATTAAGAACCAAACTATGAGGAGTTAATATGTATGGGGACACACAGGAACCATTCGAACAAAATGAGTAGATAGACACTTGAGAGTGCTTGACTATCGAGTTCCTAAAAGTGCAATTACACAGGCGCGATAGCTGGTTGGTCTATGTGATACTATTAGGTGCGCTGACAAGCCACAGCAGCGTTGGGGGCTTGCGGAAGACAACACCATCAACCATCCCAACACCAACTTGGTCATGGATGTGCATAGGGAGGTGCCTCTGTTGCCGCCCATGATCGTGGTTGACAAGCATGACGGCGCTGCTAGCCAACGATGGACCATTTACTGA ATGGAGAAAACGAGACAAGTCGTGTTGTGTATGGTCGTGGCATTCTCCCTCGCCACCCACATCAGCACCGCCCTCGGGTACGGAGCGTTCGGAGGACGCGCACATCTTTTGGGTCGAGATGGGTTGTGTTTACAGACAGCGCCGCTTTCCATATATTACACTCCAACTAAATTAACAATCTGCGATGAATCAGAGTCGGACCAATTATGGGCGATCGTTGACGATGGCACGATTCGGGCAGATAATGATAGAAGTTGTTTGGTTCCTCATAGTCGGGGTATTAAACCCATTGGAACCAATGTCGTACTAGTAGACTGTACGAAAGAGATAAGAAGTGACATGAAATGGACTAAAACGAACGATGGAACCATACATCACGACGAGTCGGGACTCGTCTTGACGGGGAAACAAGGCCAGTATGTGTCGTTGGAAGTCGATGAAGGTGCGCCGTCGCAGGGGTGGGAAGCCACGGAACGGCCCTACCCAAAGGCGGCCAACATCAAGTGGCATAACAACTTGTGTCTACAATTTGGTGATGGTGAATTTTCGTTGGGGTTGAGTGCGTGTAGTAGCAAATATGATAAGAGGCAGCGATGGGTGCTGTATGGGGATGGCACCATTCGAGGCAATGGCGATAGCAACGTCTGCTTGACTTCGCTCTTAAGCTCTTCGGTGGTTGTGTCTAAGTGCGCAGACATGCCACAACAGCGTTGGGCGCTTGCAGCGGACAACACCATCGGCCATCCCAACACCAACTTGGTCATGGATGCGCGTACGTTTGTGCGTCTCTCGCCAATGGTCCTGGTTGCCAAGCGCGCTGGGACTGATAGCCAACGATGGATCCCACAGCAGCGTTGGGGGCTTGCGGAAGACAACACCATCAACCATCCCAACACCAACTTGGTCATGGATGTGCATAGGGAGGTGCCTCTGTTGCCGCCCATGATCGTGGTTGACAAGCATGACGGCGCTGCTAGCCAACGATGGACCATTTACTGA ATGGAGAAAACGAGACAAGTCGTGTTGTGTATGGTCGTGGCATTCTCCCTCGCCACCCACATCAGCACCGCCCTCGGGTACGGAGCGTTCGGAGGACGCGCACATCTTTTGGGTCGAGATGGGTTGTGTTTACAGACAGCGCCGCTTTCCATATATTACACTCCAACTAAATTAACAATCTGCGATGAATCAGAGTCGGACCAATTATGGGCGATCGTTGACGATGGCACGATTCGGGCAGATAATGATAGAAGTTGTTTGGTTCCTCATAGTCGGGGTATTAAACCCATTGGAACCAATGTCGTACTAGTAGACTGTACGAAAGAGATAAGAAGTGACATGAAATGGACTAAAACGAACGATGGAACCATACATCACGACGAGTCGGGACTCGTCTTGACGGGGAAACAAGGCCAGTATGTGTCGTTGGAAGTCGATGAAGGTGCGCCGTCGCAGGGGTGGGAAGCCACGGAACGGCCCTACCCAAAGGCGGCCAACATCAAGTGGCATAACAACTTGTGTCTACAATTTGGTGATGGTGAATTTTCGTTGGGGTTGAGTGCGTGTAGTAGCAAATATGATAAGAGGCAGCGATGGGTGCTGTATGGGGATGGCACCATTCGAGGCAATGGCGATAGCAACGTCTGCTTGACTTCGCTCTTAAGCTCTTCGGTGGTTGTGTCTAAGTGCGCAGACATGCCACAACAGCGTTGGGCGCTTGCAGCGGACAACACCATCGGCCATCCCAACACCAACTTGGTCATGGATGCGCGTACGTTTGTGCGTCTCTCGCCAATGGTCCTGGTTGCCAAGCGCGCTGGGACTGATAGCCAACGATGGATCCCACAGCAGCGTTGGGGGCTTGCGGAAGACAACACCATCAACCATCCCAACACCAACTTGGTCATGGATGTGCATAGGGAGGTGCCTCTGTTGCCGCCCATGATCGTGGTTGACAAGCATGACGGCGCTGCTAGCCAACGATGGACCATTTACTGA MEKTRQVVLCMVVAFSLATHISTALGYGAFGGRAHLLGRDGLCLQTAPLSIYYTPTKLTICDESESDQLWAIVDDGTIRADNDRSCLVPHSRGIKPIGTNVVLVDCTKEIRSDMKWTKTNDGTIHHDESGLVLTGKQGQYVSLEVDEGAPSQGWEATERPYPKAANIKWHNNLCLQFGDGEFSLGLSACSSKYDKRQRWVLYGDGTIRGNGDSNVCLTSLLSSSVVVSKCADMPQQRWALAADNTIGHPNTNLVMDARTFVRLSPMVLVAKRAGTDSQRWIPQQRWGLAEDNTINHPNTNLVMDVHREVPLLPPMIVVDKHDGAASQRWTIY
BLAST of Carg26422 vs. NCBI nr
Match: XP_022988756.1 (ribosome-inactivating protein SNAI'-like [Cucurbita maxima]) HSP 1 Score: 517.3 bits (1331), Expect = 3.8e-143 Identity = 249/280 (88.93%), Postives = 257/280 (91.79%), Query Frame = 0
BLAST of Carg26422 vs. NCBI nr
Match: XP_023513493.1 (ribosome-inactivating protein SNAI'-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 492.3 bits (1266), Expect = 1.3e-135 Identity = 243/280 (86.79%), Postives = 250/280 (89.29%), Query Frame = 0
BLAST of Carg26422 vs. NCBI nr
Match: XP_022941585.1 (nigrin b-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 295.8 bits (756), Expect = 1.8e-76 Identity = 158/285 (55.44%), Postives = 185/285 (64.91%), Query Frame = 0
BLAST of Carg26422 vs. NCBI nr
Match: XP_022982216.1 (ribosome-inactivating protein SNAI-like [Cucurbita maxima]) HSP 1 Score: 277.3 bits (708), Expect = 6.7e-71 Identity = 151/285 (52.98%), Postives = 178/285 (62.46%), Query Frame = 0
BLAST of Carg26422 vs. NCBI nr
Match: XP_023551012.1 (nigrin b-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 274.6 bits (701), Expect = 4.3e-70 Identity = 145/286 (50.70%), Postives = 179/286 (62.59%), Query Frame = 0
BLAST of Carg26422 vs. Swiss-Prot
Match: sp|P33183|NIGB_SAMNI (Nigrin b OS=Sambucus nigra OX=4202 PE=1 SV=2) HSP 1 Score: 120.6 bits (301), Expect = 3.4e-26 Identity = 76/253 (30.04%), Postives = 125/253 (49.41%), Query Frame = 0
BLAST of Carg26422 vs. Swiss-Prot
Match: sp|Q41358|SNAIB_SAMNI (Ribosome-inactivating protein SNAI OS=Sambucus nigra OX=4202 GN=SNA-I PE=1 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.2e-23 Identity = 86/251 (34.26%), Postives = 118/251 (47.01%), Query Frame = 0
BLAST of Carg26422 vs. Swiss-Prot
Match: sp|P82683|ML3_VISAL (Beta-galactoside-specific lectin 3 OS=Viscum album OX=3972 PE=1 SV=2) HSP 1 Score: 110.5 bits (275), Expect = 3.5e-23 Identity = 75/254 (29.53%), Postives = 117/254 (46.06%), Query Frame = 0
BLAST of Carg26422 vs. Swiss-Prot
Match: sp|O22415|SNAIF_SAMNI (Ribosome-inactivating protein SNAIf OS=Sambucus nigra OX=4202 GN=SNA-If PE=1 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.5e-23 Identity = 88/252 (34.92%), Postives = 119/252 (47.22%), Query Frame = 0
BLAST of Carg26422 vs. Swiss-Prot
Match: sp|P02879|RICI_RICCO (Ricin OS=Ricinus communis OX=3988 PE=1 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.3e-20 Identity = 75/254 (29.53%), Postives = 119/254 (46.85%), Query Frame = 0
BLAST of Carg26422 vs. TrEMBL
Match: tr|A0A1S4E0X9|A0A1S4E0X9_CUCME (nigrin b-like OS=Cucumis melo OX=3656 GN=LOC103496121 PE=4 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 9.2e-61 Identity = 139/294 (47.28%), Postives = 186/294 (63.27%), Query Frame = 0
BLAST of Carg26422 vs. TrEMBL
Match: tr|A0A0A0LAC2|A0A0A0LAC2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217140 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 7.3e-58 Identity = 136/294 (46.26%), Postives = 174/294 (59.18%), Query Frame = 0
BLAST of Carg26422 vs. TrEMBL
Match: tr|A0A0A0L756|A0A0A0L756_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G219180 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 8.1e-57 Identity = 137/290 (47.24%), Postives = 177/290 (61.03%), Query Frame = 0
BLAST of Carg26422 vs. TrEMBL
Match: tr|Q9SLV9|Q9SLV9_CUCSA (XSP30 OS=Cucumis sativus OX=3659 GN=XSP30 PE=2 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 3.4e-55 Identity = 133/293 (45.39%), Postives = 177/293 (60.41%), Query Frame = 0
BLAST of Carg26422 vs. TrEMBL
Match: tr|A0A0A0L9D1|A0A0A0L9D1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217160 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 7.6e-55 Identity = 133/293 (45.39%), Postives = 176/293 (60.07%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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