Csa3G217140 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G217140
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionrRNA N-glycosidase; contains IPR000772 (Ricin B lectin domain)
LocationChr3 : 14442357 .. 14443280 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAAATCGTGTTGAGCATCATTGTAGCCTTCTCACTCACCACCCAACTTGTCATCGCAGTGCCCCCCAACTATGGATATGGAGTTGGATATGGAGGCGTCCCTGGAGCCACACATCTTGTGGGTCGTGATGGATTGTGTTTAGAGATGGTGCTTCTAAGGTCTTACAAACCTGCAGGTATTAATTTTCCAACTCGATTATTACCATGTGACGAGAAGAAACAAACTCAATTATGGACGGTTGTCGGAGATGGCACAATTCGACCCATGAATGACAGATTTTGCTTGGCTGCTGACGTTTTTTATGGGGTCATAAATAAAGCAGTAGTAAGTGAGTGTGGTAAAGTGTCAGATTCTAACAAGCAATGGATCCACAAGAATGATGGAACTATAGCCCTCGCCGAGTCAAGAATGGTTCTAACAGGAGATTCAGACTATGTGACATTGCAAAGTATCAAATATACACCATCACAAAGCTGGGAAGTCACAGAAAGTTTAAACCCAATGGTTGCAAACATCGAATGGCTTAACAACTTGTGTTTGCAATCTACAGACGATTCAAGTAATGTGGGACTGAATGGATGTAATACATACACTAAGTACCAAAGATGGGCATTGTATGCAGATGGAACCATTCGACAACATGTGAATAGAAACTATTGCTTGACTTCTGAACAAAATTACGATCGCTCTGTGGTTGTGTCTAAATGTGAAGACAAACCACAACAACGTTGGAGTCTTAATGCTAAAGACAGTACTATTGACCATCCCAACACTAACATGGTCTTGGATGTGCTTAATGTACTTGACTCCGCTTCTCCATTAGTAATCGTTACGAACCACCCTGACGGAAGTGCTAGCCAACGATGGACTATGAACTAATGGATCATATAAATAAGCTAAGGGAGATGTGAATCCACA

mRNA sequence

ATGAAAGAAATCGTGTTGAGCATCATTGTAGCCTTCTCACTCACCACCCAACTTGTCATCGCAGTGCCCCCCAACTATGGATATGGAGTTGGATATGGAGGCGTCCCTGGAGCCACACATCTTGTGGGTCGTGATGGATTGTGTTTAGAGATGGTGCTTCTAAGGTCTTACAAACCTGCAGGTATTAATTTTCCAACTCGATTATTACCATGTGACGAGAAGAAACAAACTCAATTATGGACGGTTGTCGGAGATGGCACAATTCGACCCATGAATGACAGATTTTGCTTGGCTGCTGACGTTTTTTATGGGGTCATAAATAAAGCAGTAGTAAGTGAGTGTGGTAAAGTGTCAGATTCTAACAAGCAATGGATCCACAAGAATGATGGAACTATAGCCCTCGCCGAGTCAAGAATGGTTCTAACAGGAGATTCAGACTATGTGACATTGCAAAGTATCAAATATACACCATCACAAAGCTGGGAAGTCACAGAAAGTTTAAACCCAATGGTTGCAAACATCGAATGGCTTAACAACTTGTGTTTGCAATCTACAGACGATTCAAGTAATGTGGGACTGAATGGATGTAATACATACACTAAGTACCAAAGATGGGCATTGTATGCAGATGGAACCATTCGACAACATGTGAATAGAAACTATTGCTTGACTTCTGAACAAAATTACGATCGCTCTGTGGTTGTGTCTAAATGTGAAGACAAACCACAACAACGTTGGAGTCTTAATGCTAAAGACAGTACTATTGACCATCCCAACACTAACATGGTCTTGGATGTGCTTAATGTACTTGACTCCGCTTCTCCATTAGTAATCGTTACGAACCACCCTGACGGAAGTGCTAGCCAACGATGGACTATGAACTAA

Coding sequence (CDS)

ATGAAAGAAATCGTGTTGAGCATCATTGTAGCCTTCTCACTCACCACCCAACTTGTCATCGCAGTGCCCCCCAACTATGGATATGGAGTTGGATATGGAGGCGTCCCTGGAGCCACACATCTTGTGGGTCGTGATGGATTGTGTTTAGAGATGGTGCTTCTAAGGTCTTACAAACCTGCAGGTATTAATTTTCCAACTCGATTATTACCATGTGACGAGAAGAAACAAACTCAATTATGGACGGTTGTCGGAGATGGCACAATTCGACCCATGAATGACAGATTTTGCTTGGCTGCTGACGTTTTTTATGGGGTCATAAATAAAGCAGTAGTAAGTGAGTGTGGTAAAGTGTCAGATTCTAACAAGCAATGGATCCACAAGAATGATGGAACTATAGCCCTCGCCGAGTCAAGAATGGTTCTAACAGGAGATTCAGACTATGTGACATTGCAAAGTATCAAATATACACCATCACAAAGCTGGGAAGTCACAGAAAGTTTAAACCCAATGGTTGCAAACATCGAATGGCTTAACAACTTGTGTTTGCAATCTACAGACGATTCAAGTAATGTGGGACTGAATGGATGTAATACATACACTAAGTACCAAAGATGGGCATTGTATGCAGATGGAACCATTCGACAACATGTGAATAGAAACTATTGCTTGACTTCTGAACAAAATTACGATCGCTCTGTGGTTGTGTCTAAATGTGAAGACAAACCACAACAACGTTGGAGTCTTAATGCTAAAGACAGTACTATTGACCATCCCAACACTAACATGGTCTTGGATGTGCTTAATGTACTTGACTCCGCTTCTCCATTAGTAATCGTTACGAACCACCCTGACGGAAGTGCTAGCCAACGATGGACTATGAACTAA

Protein sequence

MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPAGINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDSNKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNLCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCEDKPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTMN*
Homology
[Close]
BLAST of Csa3G217140 vs. Swiss-Prot
Match: NIGB_SAMNI (Nigrin b OS=Sambucus nigra PE=1 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-26
Identity = 81/257 (31.52%), Postives = 127/257 (49.42%), Query Frame = 1 

Query: 40  HLVGRDGLCLEMVLLRSYKPAGINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAA 99
           ++VGRDGLC+++     Y   G   P +L PC  ++  Q WT   D TIR M    C+ A
Sbjct: 311 NIVGRDGLCVDV--RNGYDTDGT--PLQLWPCGTQRN-QRWTFDSDDTIRSMGK--CMTA 370

Query: 100 DVFYGVINKAVVSECGKVSDSNKQWIHKNDGTIALAESRMVLTG----DSDYVTLQSIKY 159
           +      N  V+  C   +++  +W    DG+I    S +V+T         + L+   Y
Sbjct: 371 NGLNNGSN-IVIFNCSTAAENAIKWEVPIDGSIINPSSGLVMTAPRAASRTILLLEDNIY 430

Query: 160 TPSQSWEVTESLNPMVANIEWLNNLCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQ 219
             SQ W VT ++ P+VA+I     +CLQS  +++ V +  C   +  Q+WALY D TIR 
Sbjct: 431 AASQGWTVTNNVKPIVASIVGYKEMCLQSNGENNGVWMEDCEATSLQQQWALYGDRTIRV 490

Query: 220 HVNRNYCLTSE-QNYDRSVVVSKCEDKPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSAS 279
           +  R  C+T+   N    +++ KC+  P QRW  N+ D  I +P +  V+DV     + S
Sbjct: 491 NSTRGLCVTTNGYNSKDLIIILKCQGLPSQRWFFNS-DGAIVNPKSRHVMDVR--ASNVS 550

Query: 280 PLVIVTNHPDGSASQRW 292
              I+     G+ +Q+W
Sbjct: 551 LREIIIFPATGNPNQQW 556

[Close]
BLAST of Csa3G217140 vs. Swiss-Prot
Match: SGSL_TRIAN (Seed lectin (Fragments) OS=Trichosanthes anguina PE=1 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-23
Identity = 78/264 (29.55%), Postives = 126/264 (47.73%), Query Frame = 1 

Query: 39  THLVGRDGLCLEMVLLRSYKPAGINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLA 98
           T + GRD LC+++    +   + +     L PC ++   Q WT   DGT+R +    CLA
Sbjct: 265 TRISGRDALCVDVAGALTSDGSRLI----LYPCGQQVN-QKWTFHSDGTVRSLGK--CLA 324

Query: 99  ADVF-YGVINKAVVSECGKVSDSNKQWIHKNDGTIALAESR-MVLTGD----SDYVTLQS 158
            +   +G  N  V+ +C K++  +  W     GTI       + LT +    S  +T++ 
Sbjct: 325 TNNSKFG--NLVVIYDCSKLAAEDISWDVSVGGTIMNPNYEDLALTSNKATRSTNLTMEV 384

Query: 159 IKYTPSQSWEVTESLNPMVANIEWLNNLCLQSTDDSSNVGLNGCNTYTKYQRWALYADGT 218
             Y+ SQ W V   + P++ +I  L+++CL++TD ++N+ L  C    + Q WALY+DGT
Sbjct: 385 NTYSASQGWRVGNYVQPIIGSIVGLDDMCLEATDGNTNMWLEECVPNQREQSWALYSDGT 444

Query: 219 IRQHVNRNYCLT-SEQNYD--RSVVVSKCEDKPQQRWSLNAKDSTIDHPNTNMVLDVLNV 278
           IR   NR  C+T S   YD  + + +  C+    QRW   A  S     N  + +DV   
Sbjct: 445 IRVDDNRELCVTASSSTYDNWKVITILNCDGSNNQRWVFLADGSISTPGNQRLAMDVAR- 504

Query: 279 LDSASPLVIVTNHPDGSASQRWTM 294
                   I+ + P G  +Q+W +
Sbjct: 505 -SDVDLKKIILHRPHGDLNQQWVL 517

[Close]
BLAST of Csa3G217140 vs. Swiss-Prot
Match: RIP1_SAMNI (Ribosome-inactivating protein SNAI' OS=Sambucus nigra PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-23
Identity = 78/258 (30.23%), Postives = 129/258 (50.00%), Query Frame = 1 

Query: 43  GRDGLCLEMVLLRSYKPAGINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVF 102
           GRDG C E+      +  G   P +L  C E+   Q WT   DGTI+ +    CL     
Sbjct: 323 GRDGFCAEVK--NGDEKDGT--PVQLSSCGEQSNQQ-WTFSTDGTIQSLGK--CLTTS-- 382

Query: 103 YGVINKAVVSECGKVSDSNKQWIHKNDGTIALAESRMVLTG----DSDYVTLQSIKYTPS 162
               +  ++  C  V   + +W+   DGTI    S +VLT     +   V+L+   +   
Sbjct: 383 ----SSVMIYNCKVVPPESTKWVVSIDGTITNPRSGLVLTAPKAAEGTLVSLEKNVHAAR 442

Query: 163 QSWEVTESLNPMVANIEWLNNLCLQSTDDSSNVGLNGCNTYTKY---QRWALYADGTIRQ 222
           Q W +  ++ P+V  I     +CL++   +++V L  C+  +     Q+WALY DGTIR 
Sbjct: 443 QGW-IVGNVEPLVTFIVGYEQMCLETNPGNNDVSLGDCSVKSASKVDQKWALYGDGTIRV 502

Query: 223 HVNRNYCLTSE-QNYDRSVVVSKCEDKPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSAS 282
           + +R+ C+TSE ++ +  +++ KC     QRW  N  D TI +P++ +   V++V  +  
Sbjct: 503 NNDRSLCVTSEGKSSNEPIIILKCLGWANQRWVFNT-DGTISNPDSKL---VMHVDQNDV 562

Query: 283 PL-VIVTNHPDGSASQRW 292
           PL  I+ +HP G+++Q+W
Sbjct: 563 PLRKIILSHPSGTSNQQW 562

[Close]
BLAST of Csa3G217140 vs. Swiss-Prot
Match: RICI_RICCO (Ricin OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.4e-22
Identity = 90/281 (32.03%), Postives = 129/281 (45.91%), Query Frame = 1 

Query: 18  LVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPAGINFPTRLLPCDEKKQT 77
           L+  V PN+   V     P    +VGR+GLC+++   R +    I    +L PC      
Sbjct: 305 LIRPVVPNFNADVCMDPEP-IVRIVGRNGLCVDVRDGRFHNGNAI----QLWPCKSNTDA 364

Query: 78  -QLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDSNKQWIHKNDGTIALAE 137
            QLWT+  D TIR  N +         GV    ++ +C   +    +W   ++GTI    
Sbjct: 365 NQLWTLKRDNTIRS-NGKCLTTYGYSPGVY--VMIYDCNTAATDATRWQIWDNGTIINPR 424

Query: 138 SRMVLTGDSDY----VTLQSIKYTPSQSWEVTESLNPMVANIEWLNNLCLQSTDDSSNVG 197
           S +VL   S      +T+Q+  Y  SQ W  T +  P V  I  L  LCLQ+  +S  V 
Sbjct: 425 SSLVLAATSGNSGTTLTVQTNIYAVSQGWLPTNNTQPFVTTIVGLYGLCLQA--NSGQVW 484

Query: 198 LNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVV-VSKCEDKPQ-QRWSLNA 257
           +  C++    Q+WALYADG+IR   NR+ CLTS+ N   +VV +  C      QRW    
Sbjct: 485 IEDCSSEKAEQQWALYADGSIRPQQNRDNCLTSDSNIRETVVKILSCGPASSGQRWMFK- 544

Query: 258 KDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRW 292
            D TI +  + +VLDV     S   +++   H  G  +Q W
Sbjct: 545 NDGTILNLYSGLVLDVRASDPSLKQIILYPLH--GDPNQIW 572

[Close]
BLAST of Csa3G217140 vs. Swiss-Prot
Match: ABRC_ABRPR (Abrin-c OS=Abrus precatorius PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.7e-21
Identity = 79/258 (30.62%), Postives = 127/258 (49.22%), Query Frame = 1 

Query: 43  GRDGLCLEMVLLRSYKPAGINFPTRLLPC---DEKKQTQLWTVVGDGTIRPMNDRFCLAA 102
           GRDG+C+++         G +   R++     D  ++ QLWT+  D TIR  ++  CL  
Sbjct: 315 GRDGMCVDVY------DDGYHNGNRIIAWKCKDRLEENQLWTLKSDKTIR--SNGKCLTT 374

Query: 103 DVFYGVINKAVVSECGKVSDSNKQWIHKNDGTIALAESRMVLTGDSDYV----TLQSIKY 162
           +  Y   N  ++ +C         W   ++GTI   +S +VL+ +S  +    T+Q+ +Y
Sbjct: 375 EG-YAPGNYVMIYDCTSAVAEATYWEIWDNGTIINPKSALVLSAESSSMGGTLTVQTNEY 434

Query: 163 TPSQSWEVTESLNPMVANIEWLNNLCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQ 222
              Q W    + +P V +I   ++LC+Q+    SNV L  C+   K Q+WALY DG+IR 
Sbjct: 435 LMRQGWRTGNNTSPFVTSISGYSDLCMQA--QGSNVWLADCDNNKKEQQWALYTDGSIRS 494

Query: 223 HVNRNYCLTSEQNYDRS-VVVSKCEDK-PQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSA 282
             N N CLTS+ +   S +V+  C +    QRW L   D +I + + +MV+DV     S 
Sbjct: 495 VQNTNNCLTSKDHKQGSPIVLMACSNGWASQRW-LFKNDGSIYNLHDDMVMDVKRSDPSL 554

Query: 283 SPLVIVTNHPDGSASQRW 292
             +++   H  G  +Q W
Sbjct: 555 KEIILHPYH--GKPNQIW 558

[Close]
BLAST of Csa3G217140 vs. TrEMBL
Match: A0A0A0LAC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G217140 PE=4 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 1.2e-170
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60

Query: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120
           GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS
Sbjct: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120

Query: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180
           NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL
Sbjct: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180

Query: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240
           CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED
Sbjct: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240

Query: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTMN 295
           KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTMN
Sbjct: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTMN 294

[Close]
BLAST of Csa3G217140 vs. TrEMBL
Match: A0A0A0L9D1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G217160 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 5.5e-144
Identity = 253/293 (86.35%), Postives = 268/293 (91.47%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM     YKPA
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPW--YKPA 60

Query: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120
           GINFPTRL PCDEKKQTQLWT+VGDGTIRPMND+FCLAA+VFYGVINKAVVSECGKVSD 
Sbjct: 61  GINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDP 120

Query: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180
           NK+W  KNDGTIAL +SRMVLTGD DYVTLQS KYTPSQSWEVTESLN MVANIEWLNNL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180

Query: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240
           CLQSTDDSS+VGLNGCNT  KYQRWALYADGTIRQHVN+NYCLTS+Q++ R VVVSKCED
Sbjct: 181 CLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCED 240

Query: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTM 294
           KPQQRWSL+AKD TIDHPNT+MVLDV +V DS  P V+VTN  DGSASQRWT+
Sbjct: 241 KPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

[Close]
BLAST of Csa3G217140 vs. TrEMBL
Match: Q9SLV9_CUCSA (XSP30 OS=Cucumis sativus GN=XSP30 PE=2 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 1.6e-143
Identity = 252/293 (86.01%), Postives = 267/293 (91.13%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSIIVAFSLTTQL IAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM     YKPA
Sbjct: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPW--YKPA 60

Query: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120
           GINFPTRL PCDEKKQTQLWT+VGDGTIRPMND+FCLAA+VFYGVINKAVVSECGKVSD 
Sbjct: 61  GINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDP 120

Query: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180
           NK+W  KNDGTIAL +SRMVLTGD DYVTLQS KYTPSQSWEVTESLN MVANIEWLNNL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180

Query: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240
           CLQSTDDSS+VGLNGCNT  KYQRWALYADGTIRQHVN+NYCLTS+Q++ R VVVSKCED
Sbjct: 181 CLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCED 240

Query: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTM 294
           KPQQRWSL+AKD TIDHPNT+MVLDV +V DS  P V+VTN  DGSASQRWT+
Sbjct: 241 KPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

[Close]
BLAST of Csa3G217140 vs. TrEMBL
Match: A0A0A0L756_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219180 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 6.1e-103
Identity = 194/292 (66.44%), Postives = 224/292 (76.71%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSI+VAFSLTT L +AVP +YGY V    VPGATHLVGRDGLCLEM     +   
Sbjct: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEM---SPWFYK 60

Query: 61  GINFPTRLLPCDE-KKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSD 120
           G NFPTRL PC+E KKQTQLWTV+ D TIRPMNDR+CL + V    I   VVSEC K   
Sbjct: 61  GSNFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPH 120

Query: 121 SNKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNN 180
           SNK+WIHK D TI    S MVLTG+S+YVT+Q  K  PSQSWE T+SL PMVANI+WL N
Sbjct: 121 SNKKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLEN 180

Query: 181 LCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCE 240
           LCLQST DS+ V L+GCN+  K Q W+LY DGTIR+HVNRNYCLTSEQ++ R V VSKCE
Sbjct: 181 LCLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCE 240

Query: 241 DKPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRW 292
           DKPQQRW L A+D+TI+HPNT+MV+DVL+V     PL +VTNH DG+A+QRW
Sbjct: 241 DKPQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRW 285

[Close]
BLAST of Csa3G217140 vs. TrEMBL
Match: Q84LM3_CUCSA (Xylem sap protein 30-kDa (Fragment) OS=Cucumis sativus GN=XSP30 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.5e-27
Identity = 65/72 (90.28%), Postives = 65/72 (90.28%), Query Frame = 1 

Query: 1  MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
          MKEIVLSIIVAFSLTTQL IAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM     YKPA
Sbjct: 1  MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM--SPWYKPA 60

Query: 61 GINFPTRLLPCD 73
          GINFPTRL PCD
Sbjct: 61 GINFPTRLSPCD 70

[Close]
BLAST of Csa3G217140 vs. NCBI nr
Match: gi|778680239|ref|XP_004151509.2| (PREDICTED: nigrin b-like [Cucumis sativus])

HSP 1 Score: 607.1 bits (1564), Expect = 1.7e-170
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60

Query: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120
           GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS
Sbjct: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120

Query: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180
           NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL
Sbjct: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180

Query: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240
           CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED
Sbjct: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240

Query: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTMN 295
           KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTMN
Sbjct: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTMN 294

[Close]
BLAST of Csa3G217140 vs. NCBI nr
Match: gi|700202446|gb|KGN57579.1| (hypothetical protein Csa_3G217160 [Cucumis sativus])

HSP 1 Score: 518.5 bits (1334), Expect = 7.8e-144
Identity = 253/293 (86.35%), Postives = 268/293 (91.47%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM     YKPA
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPW--YKPA 60

Query: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120
           GINFPTRL PCDEKKQTQLWT+VGDGTIRPMND+FCLAA+VFYGVINKAVVSECGKVSD 
Sbjct: 61  GINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDP 120

Query: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180
           NK+W  KNDGTIAL +SRMVLTGD DYVTLQS KYTPSQSWEVTESLN MVANIEWLNNL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180

Query: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240
           CLQSTDDSS+VGLNGCNT  KYQRWALYADGTIRQHVN+NYCLTS+Q++ R VVVSKCED
Sbjct: 181 CLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCED 240

Query: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTM 294
           KPQQRWSL+AKD TIDHPNT+MVLDV +V DS  P V+VTN  DGSASQRWT+
Sbjct: 241 KPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

[Close]
BLAST of Csa3G217140 vs. NCBI nr
Match: gi|566006087|ref|NP_001274403.1| (uncharacterized protein LOC101221335 precursor [Cucumis sativus])

HSP 1 Score: 516.9 bits (1330), Expect = 2.3e-143
Identity = 252/293 (86.01%), Postives = 267/293 (91.13%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSIIVAFSLTTQL IAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM     YKPA
Sbjct: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPW--YKPA 60

Query: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120
           GINFPTRL PCDEKKQTQLWT+VGDGTIRPMND+FCLAA+VFYGVINKAVVSECGKVSD 
Sbjct: 61  GINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDP 120

Query: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180
           NK+W  KNDGTIAL +SRMVLTGD DYVTLQS KYTPSQSWEVTESLN MVANIEWLNNL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180

Query: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240
           CLQSTDDSS+VGLNGCNT  KYQRWALYADGTIRQHVN+NYCLTS+Q++ R VVVSKCED
Sbjct: 181 CLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCED 240

Query: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTM 294
           KPQQRWSL+AKD TIDHPNT+MVLDV +V DS  P V+VTN  DGSASQRWT+
Sbjct: 241 KPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

[Close]
BLAST of Csa3G217140 vs. NCBI nr
Match: gi|659112133|ref|XP_008456079.1| (PREDICTED: nigrin b-like [Cucumis melo])

HSP 1 Score: 435.6 bits (1119), Expect = 6.7e-119
Identity = 219/295 (74.24%), Postives = 239/295 (81.02%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSIIVAFSLTT L +AVP NYGYG  YGGVP ATHLVGRDGLCLEM     +   
Sbjct: 1   MKEIVLSIIVAFSLTTHLAMAVPSNYGYGGEYGGVPRATHLVGRDGLCLEM---SPWFYR 60

Query: 61  GINFPTRLLPCDE-KKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSD 120
           G NFPTRL PCDE KKQTQLWTVVGDGTIRPMND+FCL ADV  G+INKAVV EC K  +
Sbjct: 61  GNNFPTRLSPCDEHKKQTQLWTVVGDGTIRPMNDKFCLVADVLVGLINKAVVRECAKEPN 120

Query: 121 SNKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNN 180
           SNK+W HK DGTI   ES MVLTGDSDYVTLQS K TPSQSWE TES  PM+ANIEWLNN
Sbjct: 121 SNKRWTHKKDGTITHVESGMVLTGDSDYVTLQSNKNTPSQSWEATESSTPMIANIEWLNN 180

Query: 181 LCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCE 240
           LCLQSTDDS++VGLNGCN   K QRWALY DGTIRQ+VNRNYCLTS++   R +V+SKCE
Sbjct: 181 LCLQSTDDSNHVGLNGCNRENKDQRWALYGDGTIRQNVNRNYCLTSDEYLGRFIVMSKCE 240

Query: 241 DKPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTMN 295
           DKPQQRW+L AKDSTIDHPN++MV+DVL V        +VTN  DGSASQRWT+N
Sbjct: 241 DKPQQRWNLGAKDSTIDHPNSDMVMDVLFVPYYDFSSAVVTNRRDGSASQRWTIN 292

[Close]
BLAST of Csa3G217140 vs. NCBI nr
Match: gi|449457105|ref|XP_004146289.1| (PREDICTED: nigrin b-like [Cucumis sativus])

HSP 1 Score: 382.1 bits (980), Expect = 8.8e-103
Identity = 194/292 (66.44%), Postives = 224/292 (76.71%), Query Frame = 1 

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSI+VAFSLTT L +AVP +YGY V    VPGATHLVGRDGLCLEM     +   
Sbjct: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEM---SPWFYK 60

Query: 61  GINFPTRLLPCDE-KKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSD 120
           G NFPTRL PC+E KKQTQLWTV+ D TIRPMNDR+CL + V    I   VVSEC K   
Sbjct: 61  GSNFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPH 120

Query: 121 SNKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNN 180
           SNK+WIHK D TI    S MVLTG+S+YVT+Q  K  PSQSWE T+SL PMVANI+WL N
Sbjct: 121 SNKKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLEN 180

Query: 181 LCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCE 240
           LCLQST DS+ V L+GCN+  K Q W+LY DGTIR+HVNRNYCLTSEQ++ R V VSKCE
Sbjct: 181 LCLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCE 240

Query: 241 DKPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRW 292
           DKPQQRW L A+D+TI+HPNT+MV+DVL+V     PL +VTNH DG+A+QRW
Sbjct: 241 DKPQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRW 285

The following BLAST results are available for this feature:
BLAST of Csa3G217140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NIGB_SAMNI1.7e-2631.52Nigrin b OS=Sambucus nigra PE=1 SV=2[more]
SGSL_TRIAN1.1e-2329.55Seed lectin (Fragments) OS=Trichosanthes anguina PE=1 SV=2[more]
RIP1_SAMNI1.1e-2330.23Ribosome-inactivating protein SNAI' OS=Sambucus nigra PE=1 SV=1[more]
RICI_RICCO3.4e-2232.03Ricin OS=Ricinus communis PE=1 SV=1[more]
ABRC_ABRPR1.7e-2130.62Abrin-c OS=Abrus precatorius PE=1 SV=1[more]
BLAST of Csa3G217140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAC2_CUCSA1.2e-170100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G217140 PE=4 SV=1[more]
A0A0A0L9D1_CUCSA5.5e-14486.35Uncharacterized protein OS=Cucumis sativus GN=Csa_3G217160 PE=4 SV=1[more]
Q9SLV9_CUCSA1.6e-14386.01XSP30 OS=Cucumis sativus GN=XSP30 PE=2 SV=1[more]
A0A0A0L756_CUCSA6.1e-10366.44Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219180 PE=4 SV=1[more]
Q84LM3_CUCSA5.5e-2790.28Xylem sap protein 30-kDa (Fragment) OS=Cucumis sativus GN=XSP30 PE=4 SV=1[more]
BLAST of Csa3G217140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778680239|ref|XP_004151509.2|1.7e-170100.00PREDICTED: nigrin b-like [Cucumis sativus][more]
gi|700202446|gb|KGN57579.1|7.8e-14486.35hypothetical protein Csa_3G217160 [Cucumis sativus][more]
gi|566006087|ref|NP_001274403.1|2.3e-14386.01uncharacterized protein LOC101221335 precursor [Cucumis sativus][more]
gi|659112133|ref|XP_008456079.1|6.7e-11974.24PREDICTED: nigrin b-like [Cucumis melo][more]
gi|449457105|ref|XP_004146289.1|8.8e-10366.44PREDICTED: nigrin b-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000772Ricin_B_lectin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G217140.1Csa3G217140.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000772Ricin B, lectin domainPFAMPF00652Ricin_B_lectincoord: 178..291
score: 1.3E-21coord: 42..161
score: 7.0
IPR000772Ricin B, lectin domainSMARTSM00458ricin_3coord: 168..294
score: 2.3E-18coord: 36..164
score: 1.
IPR000772Ricin B, lectin domainPROFILEPS50231RICIN_B_LECTINcoord: 167..294
score: 28.42coord: 35..164
score: 18
IPR000772Ricin B, lectin domainunknownSSF50370Ricin B-like lectinscoord: 39..163
score: 1.87E-18coord: 173..293
score: 3.51
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 41..164
score: 8.4E-16coord: 173..293
score: 8.9