CsGy3G018790 (gene) Cucumber (Gy14) v2

NameCsGy3G018790
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionnigrin b-like
LocationChr3 : 14908173 .. 14909057 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAAATCGTGTTGAGCATCATTGTAGCCTTCTCACTCACCACCCAACTTGTCATCGCAGTGCCCCCCAACTATGGATATGGAGTTGGATATGGAGGCGTCCCTGGAGCCACACATCTTGTGGGTCGTGATGGATTGTGTTTAGAGATGGTGCTTCTAAGGTCTTACAAACCTGCAGGTATTAATTTTCCAACTCGATTATTACCATGTGACGAGAAGAAACAAACTCAATTATGGACGGTTGTCGGAGATGGCACAATTCGACCCATGAATGACAGATTTTGCTTGGCTGCTGACGTTTTTTATGGGGTCATAAATAAAGCAGTAGTAAGTGAGTGTGGTAAAGTGTCAGATTCTAACAAGCAATGGATCCACAAGAATGATGGAACTATAGCCCTCGCCGAGTCAAGAATGGTTCTAACAGGAGATTCAGACTATGTGACATTGCAAAGTATCAAATATACACCATCACAAAGCTGGGAAGTCACAGAAAGTTTAAACCCAATGGTTGCAAACATCGAATGGCTTAACAACTTGTGTTTGCAATCTACAGACGATTCAAGTAATGTGGGACTGAATGGATGTAATACATACACTAAGTACCAAAGATGGGCATTGTATGCAGATGGAACCATTCGACAACATGTGAATAGAAACTATTGCTTGACTTCTGAACAAAATTACGATCGCTCTGTGGTTGTGTCTAAATGTGAAGACAAACCACAACAACGTTGGAGTCTTAATGCTAAAGACAGTACTATTGACCATCCCAACACTAACATGGTCTTGGATGTGCTTAATGTACTTGACTCCGCTTCTCCATTAGTAATCGTTACGAACCACCCTGACGGAAGTGCTAGCCAACGATGGACTATGAACTAA

mRNA sequence

ATGAAAGAAATCGTGTTGAGCATCATTGTAGCCTTCTCACTCACCACCCAACTTGTCATCGCAGTGCCCCCCAACTATGGATATGGAGTTGGATATGGAGGCGTCCCTGGAGCCACACATCTTGTGGGTCGTGATGGATTGTGTTTAGAGATGGTGCTTCTAAGGTCTTACAAACCTGCAGGTATTAATTTTCCAACTCGATTATTACCATGTGACGAGAAGAAACAAACTCAATTATGGACGGTTGTCGGAGATGGCACAATTCGACCCATGAATGACAGATTTTGCTTGGCTGCTGACGTTTTTTATGGGGTCATAAATAAAGCAGTAGTAAGTGAGTGTGGTAAAGTGTCAGATTCTAACAAGCAATGGATCCACAAGAATGATGGAACTATAGCCCTCGCCGAGTCAAGAATGGTTCTAACAGGAGATTCAGACTATGTGACATTGCAAAGTATCAAATATACACCATCACAAAGCTGGGAAGTCACAGAAAGTTTAAACCCAATGGTTGCAAACATCGAATGGCTTAACAACTTGTGTTTGCAATCTACAGACGATTCAAGTAATGTGGGACTGAATGGATGTAATACATACACTAAGTACCAAAGATGGGCATTGTATGCAGATGGAACCATTCGACAACATGTGAATAGAAACTATTGCTTGACTTCTGAACAAAATTACGATCGCTCTGTGGTTGTGTCTAAATGTGAAGACAAACCACAACAACGTTGGAGTCTTAATGCTAAAGACAGTACTATTGACCATCCCAACACTAACATGGTCTTGGATGTGCTTAATGTACTTGACTCCGCTTCTCCATTAGTAATCGTTACGAACCACCCTGACGGAAGTGCTAGCCAACGATGGACTATGAACTAA

Coding sequence (CDS)

ATGAAAGAAATCGTGTTGAGCATCATTGTAGCCTTCTCACTCACCACCCAACTTGTCATCGCAGTGCCCCCCAACTATGGATATGGAGTTGGATATGGAGGCGTCCCTGGAGCCACACATCTTGTGGGTCGTGATGGATTGTGTTTAGAGATGGTGCTTCTAAGGTCTTACAAACCTGCAGGTATTAATTTTCCAACTCGATTATTACCATGTGACGAGAAGAAACAAACTCAATTATGGACGGTTGTCGGAGATGGCACAATTCGACCCATGAATGACAGATTTTGCTTGGCTGCTGACGTTTTTTATGGGGTCATAAATAAAGCAGTAGTAAGTGAGTGTGGTAAAGTGTCAGATTCTAACAAGCAATGGATCCACAAGAATGATGGAACTATAGCCCTCGCCGAGTCAAGAATGGTTCTAACAGGAGATTCAGACTATGTGACATTGCAAAGTATCAAATATACACCATCACAAAGCTGGGAAGTCACAGAAAGTTTAAACCCAATGGTTGCAAACATCGAATGGCTTAACAACTTGTGTTTGCAATCTACAGACGATTCAAGTAATGTGGGACTGAATGGATGTAATACATACACTAAGTACCAAAGATGGGCATTGTATGCAGATGGAACCATTCGACAACATGTGAATAGAAACTATTGCTTGACTTCTGAACAAAATTACGATCGCTCTGTGGTTGTGTCTAAATGTGAAGACAAACCACAACAACGTTGGAGTCTTAATGCTAAAGACAGTACTATTGACCATCCCAACACTAACATGGTCTTGGATGTGCTTAATGTACTTGACTCCGCTTCTCCATTAGTAATCGTTACGAACCACCCTGACGGAAGTGCTAGCCAACGATGGACTATGAACTAA

Protein sequence

MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPAGINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDSNKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNLCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCEDKPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTMN
BLAST of CsGy3G018790 vs. NCBI nr
Match: XP_004151509.2 (PREDICTED: nigrin b-like [Cucumis sativus] >KGN57577.1 hypothetical protein Csa_3G217140 [Cucumis sativus])

HSP 1 Score: 608.2 bits (1567), Expect = 1.5e-170
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60

Query: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120
           GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS
Sbjct: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120

Query: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180
           NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL
Sbjct: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180

Query: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240
           CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED
Sbjct: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240

Query: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTMN 295
           KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTMN
Sbjct: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTMN 294

BLAST of CsGy3G018790 vs. NCBI nr
Match: KGN57579.1 (hypothetical protein Csa_3G217160 [Cucumis sativus])

HSP 1 Score: 519.6 bits (1337), Expect = 6.8e-144
Identity = 253/293 (86.35%), Postives = 268/293 (91.47%), Query Frame = 0

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM     YKPA
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM--SPWYKPA 60

Query: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120
           GINFPTRL PCDEKKQTQLWT+VGDGTIRPMND+FCLAA+VFYGVINKAVVSECGKVSD 
Sbjct: 61  GINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDP 120

Query: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180
           NK+W  KNDGTIAL +SRMVLTGD DYVTLQS KYTPSQSWEVTESLN MVANIEWLNNL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180

Query: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240
           CLQSTDDSS+VGLNGCNT  KYQRWALYADGTIRQHVN+NYCLTS+Q++ R VVVSKCED
Sbjct: 181 CLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCED 240

Query: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTM 294
           KPQQRWSL+AKD TIDHPNT+MVLDV +V DS  P V+VTN  DGSASQRWT+
Sbjct: 241 KPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

BLAST of CsGy3G018790 vs. NCBI nr
Match: NP_001274403.1 (uncharacterized protein LOC101221335 precursor [Cucumis sativus] >BAA88294.1 XSP30 [Cucumis sativus])

HSP 1 Score: 518.1 bits (1333), Expect = 2.0e-143
Identity = 252/293 (86.01%), Postives = 267/293 (91.13%), Query Frame = 0

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSIIVAFSLTTQL IAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM     YKPA
Sbjct: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM--SPWYKPA 60

Query: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120
           GINFPTRL PCDEKKQTQLWT+VGDGTIRPMND+FCLAA+VFYGVINKAVVSECGKVSD 
Sbjct: 61  GINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDP 120

Query: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180
           NK+W  KNDGTIAL +SRMVLTGD DYVTLQS KYTPSQSWEVTESLN MVANIEWLNNL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180

Query: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240
           CLQSTDDSS+VGLNGCNT  KYQRWALYADGTIRQHVN+NYCLTS+Q++ R VVVSKCED
Sbjct: 181 CLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCED 240

Query: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTM 294
           KPQQRWSL+AKD TIDHPNT+MVLDV +V DS  P V+VTN  DGSASQRWT+
Sbjct: 241 KPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

BLAST of CsGy3G018790 vs. NCBI nr
Match: XP_016901886.1 (PREDICTED: nigrin b-like [Cucumis melo])

HSP 1 Score: 436.8 bits (1122), Expect = 5.8e-119
Identity = 219/295 (74.24%), Postives = 239/295 (81.02%), Query Frame = 0

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSIIVAFSLTT L +AVP NYGYG  YGGVP ATHLVGRDGLCLEM     +   
Sbjct: 1   MKEIVLSIIVAFSLTTHLAMAVPSNYGYGGEYGGVPRATHLVGRDGLCLEM---SPWFYR 60

Query: 61  GINFPTRLLPCDE-KKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSD 120
           G NFPTRL PCDE KKQTQLWTVVGDGTIRPMND+FCL ADV  G+INKAVV EC K  +
Sbjct: 61  GNNFPTRLSPCDEHKKQTQLWTVVGDGTIRPMNDKFCLVADVLVGLINKAVVRECAKEPN 120

Query: 121 SNKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNN 180
           SNK+W HK DGTI   ES MVLTGDSDYVTLQS K TPSQSWE TES  PM+ANIEWLNN
Sbjct: 121 SNKRWTHKKDGTITHVESGMVLTGDSDYVTLQSNKNTPSQSWEATESSTPMIANIEWLNN 180

Query: 181 LCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCE 240
           LCLQSTDDS++VGLNGCN   K QRWALY DGTIRQ+VNRNYCLTS++   R +V+SKCE
Sbjct: 181 LCLQSTDDSNHVGLNGCNRENKDQRWALYGDGTIRQNVNRNYCLTSDEYLGRFIVMSKCE 240

Query: 241 DKPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTMN 295
           DKPQQRW+L AKDSTIDHPN++MV+DVL V        +VTN  DGSASQRWT+N
Sbjct: 241 DKPQQRWNLGAKDSTIDHPNSDMVMDVLFVPYYDFSSAVVTNRRDGSASQRWTIN 292

BLAST of CsGy3G018790 vs. NCBI nr
Match: XP_004146289.1 (PREDICTED: nigrin b-like [Cucumis sativus] >KGN57583.1 hypothetical protein Csa_3G219180 [Cucumis sativus])

HSP 1 Score: 383.6 bits (984), Expect = 5.8e-103
Identity = 194/292 (66.44%), Postives = 224/292 (76.71%), Query Frame = 0

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSI+VAFSLTT L +AVP +YGY V    VPGATHLVGRDGLCLEM     +   
Sbjct: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEM---SPWFYK 60

Query: 61  GINFPTRLLPCDE-KKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSD 120
           G NFPTRL PC+E KKQTQLWTV+ D TIRPMNDR+CL + V    I   VVSEC K   
Sbjct: 61  GSNFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPH 120

Query: 121 SNKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNN 180
           SNK+WIHK D TI    S MVLTG+S+YVT+Q  K  PSQSWE T+SL PMVANI+WL N
Sbjct: 121 SNKKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLEN 180

Query: 181 LCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCE 240
           LCLQST DS+ V L+GCN+  K Q W+LY DGTIR+HVNRNYCLTSEQ++ R V VSKCE
Sbjct: 181 LCLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCE 240

Query: 241 DKPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRW 292
           DKPQQRW L A+D+TI+HPNT+MV+DVL+V     PL +VTNH DG+A+QRW
Sbjct: 241 DKPQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRW 285

BLAST of CsGy3G018790 vs. Swiss-Prot
Match: sp|P33183|NIGB_SAMNI (Nigrin b OS=Sambucus nigra OX=4202 PE=1 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-27
Identity = 81/257 (31.52%), Postives = 128/257 (49.81%), Query Frame = 0

Query: 40  HLVGRDGLCLEMVLLRSYKPAGINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAA 99
           ++VGRDGLC++  +   Y   G   P +L PC  ++  Q WT   D TIR M    C+ A
Sbjct: 311 NIVGRDGLCVD--VRNGYDTDGT--PLQLWPCGTQR-NQRWTFDSDDTIRSMGK--CMTA 370

Query: 100 DVFYGVINKAVVSECGKVSDSNKQWIHKNDGTIALAESRMVLT----GDSDYVTLQSIKY 159
           +      N  V+  C   +++  +W    DG+I    S +V+T         + L+   Y
Sbjct: 371 NGLNNGSN-IVIFNCSTAAENAIKWEVPIDGSIINPSSGLVMTAPRAASRTILLLEDNIY 430

Query: 160 TPSQSWEVTESLNPMVANIEWLNNLCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQ 219
             SQ W VT ++ P+VA+I     +CLQS  +++ V +  C   +  Q+WALY D TIR 
Sbjct: 431 AASQGWTVTNNVKPIVASIVGYKEMCLQSNGENNGVWMEDCEATSLQQQWALYGDRTIRV 490

Query: 220 HVNRNYCLTSE-QNYDRSVVVSKCEDKPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSAS 279
           +  R  C+T+   N    +++ KC+  P QRW  N+ D  I +P +  V+DV     + S
Sbjct: 491 NSTRGLCVTTNGYNSKDLIIILKCQGLPSQRWFFNS-DGAIVNPKSRHVMDVR--ASNVS 550

Query: 280 PLVIVTNHPDGSASQRW 292
              I+     G+ +Q+W
Sbjct: 551 LREIIIFPATGNPNQQW 556

BLAST of CsGy3G018790 vs. Swiss-Prot
Match: sp|Q41358|SNAIB_SAMNI (Ribosome-inactivating protein SNAI OS=Sambucus nigra OX=4202 GN=SNA-I PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.9e-26
Identity = 81/254 (31.89%), Postives = 123/254 (48.43%), Query Frame = 0

Query: 43  GRDGLCLEMVLLRSYKPAGINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVF 102
           G DGLC+++     Y       P +L PC   +  QLWT   DGTIR +    CL A   
Sbjct: 327 GWDGLCVDV----RYGHYIDGNPVQLRPCG-NECNQLWTFRTDGTIRWLGK--CLTAS-- 386

Query: 103 YGVINKAVVSECGKVSDSNKQWIHKNDGTIALAESRMVLT----GDSDYVTLQSIKYTPS 162
               +  ++ +C  V     +W+   DGTI    S +VLT     +   ++L++  +   
Sbjct: 387 ----SSVMIYDCNTVPPEATKWVVSIDGTITNPHSGLVLTAPQAAEGTALSLENNIHAAR 446

Query: 163 QSWEVTESLNPMVANIEWLNNLCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVN 222
           Q W V + + P+V  I     +CL+   +++ V L  C      Q WALY DGTIR + N
Sbjct: 447 QGWTVGD-VEPLVTFIVGYKQMCLRENGENNFVWLEDCVLNRVQQEWALYGDGTIRVNSN 506

Query: 223 RNYCLTSEQNYDRS-VVVSKCEDKPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLV 282
           R+ C+TSE +     +V+ KCE    QRW  N  + TI +PN  +++DV       S   
Sbjct: 507 RSLCVTSEDHEPSDLIVILKCEGSGNQRWVFNT-NGTISNPNAKLLMDVAQ--RDVSLRK 563

Query: 283 IVTNHPDGSASQRW 292
           I+   P G+ +Q+W
Sbjct: 567 IILYRPTGNPNQQW 563

BLAST of CsGy3G018790 vs. Swiss-Prot
Match: sp|O22415|SNAIF_SAMNI (Ribosome-inactivating protein SNAIf OS=Sambucus nigra OX=4202 GN=SNA-If PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.3e-24
Identity = 81/254 (31.89%), Postives = 122/254 (48.03%), Query Frame = 0

Query: 43  GRDGLCLEMVLLRSYKPAGINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVF 102
           G DGLC++   +R       N   +L PC   +  QLWT   DGTIR +    CL     
Sbjct: 327 GWDGLCVD---VRDGHYIDGN-TVQLGPCG-NECNQLWTFRTDGTIRWLGK--CLTTS-- 386

Query: 103 YGVINKAVVSECGKVSDSNKQWIHKNDGTIALAESRMVLT----GDSDYVTLQSIKYTPS 162
               +  ++ +C  V     +W+   DGTI    S +VLT     +   ++L++  +   
Sbjct: 387 ----SSVMIYDCNTVPPEATKWVVSTDGTITNPRSGLVLTAPQAAEGTALSLENNIHAAR 446

Query: 163 QSWEVTESLNPMVANIEWLNNLCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVN 222
           Q W V + + P+V  I     +CL    +++ V L  C      Q WALY DGTIR + N
Sbjct: 447 QGWTVGD-VEPLVTFIVGYKQMCLTENGENNFVWLEDCVLNRVEQEWALYGDGTIRVNSN 506

Query: 223 RNYCLTSEQNYDRS-VVVSKCEDKPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLV 282
           R+ C+TSE +     +V+ KCE    QRW  N  + TI +PN  +V+DV     + S   
Sbjct: 507 RSLCVTSEDHEPSDLIVILKCEGSGNQRWVFNT-NGTISNPNAKLVMDVAQ--SNVSLRK 563

Query: 283 IVTNHPDGSASQRW 292
           I+   P G+ +Q+W
Sbjct: 567 IILYPPTGNPNQQW 563

BLAST of CsGy3G018790 vs. Swiss-Prot
Match: sp|P02879|RICI_RICCO (Ricin OS=Ricinus communis OX=3988 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.1e-23
Identity = 90/281 (32.03%), Postives = 132/281 (46.98%), Query Frame = 0

Query: 18  LVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPAGINFPTRLLPCDEKKQ- 77
           L+  V PN+   V     P    +VGR+GLC+++   R +    I    +L PC      
Sbjct: 305 LIRPVVPNFNADVCMDPEP-IVRIVGRNGLCVDVRDGRFHNGNAI----QLWPCKSNTDA 364

Query: 78  TQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDSNKQWIHKNDGTIALAE 137
            QLWT+  D TIR  ++  CL     Y      ++ +C   +    +W   ++GTI    
Sbjct: 365 NQLWTLKRDNTIR--SNGKCLTT-YGYSPGVYVMIYDCNTAATDATRWQIWDNGTIINPR 424

Query: 138 SRMVLTGDS----DYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNLCLQSTDDSSNVG 197
           S +VL   S      +T+Q+  Y  SQ W  T +  P V  I  L  LCLQ+  +S  V 
Sbjct: 425 SSLVLAATSGNSGTTLTVQTNIYAVSQGWLPTNNTQPFVTTIVGLYGLCLQA--NSGQVW 484

Query: 198 LNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVV-VSKCEDKPQ-QRWSLNA 257
           +  C++    Q+WALYADG+IR   NR+ CLTS+ N   +VV +  C      QRW    
Sbjct: 485 IEDCSSEKAEQQWALYADGSIRPQQNRDNCLTSDSNIRETVVKILSCGPASSGQRWMFK- 544

Query: 258 KDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRW 292
            D TI +  + +VLDV     S   +++   H  G  +Q W
Sbjct: 545 NDGTILNLYSGLVLDVRASDPSLKQIILYPLH--GDPNQIW 572

BLAST of CsGy3G018790 vs. Swiss-Prot
Match: sp|P06750|AGGL_RICCO (Agglutinin OS=Ricinus communis OX=3988 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.8e-21
Identity = 88/282 (31.21%), Postives = 129/282 (45.74%), Query Frame = 0

Query: 18  LVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPAGINFPTRLLPCDEKKQ- 77
           L+  V PN+   V     P    +VGR+GLC+++     +       P +L PC      
Sbjct: 293 LIRPVVPNFNADVCMDPEP-IVRIVGRNGLCVDVTGEEFFD----GNPIQLWPCKSNTDW 352

Query: 78  TQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDSNKQWIHKNDGTIALAE 137
            QLWT+  D TIR  ++  CL          + V+  C   +    +W   ++ TI    
Sbjct: 353 NQLWTLRKDSTIR--SNGKCLTISK-SSPRQQVVIYNCSTATVGATRWQIWDNRTIINPR 412

Query: 138 SRMVLTGDS----DYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNLCLQSTDDSSNVG 197
           S +VL   S      +T+Q+  Y  SQ W  T +  P V  I  L  +CLQ+  +S  V 
Sbjct: 413 SGLVLAATSGNSGTKLTVQTNIYAVSQGWLPTNNTQPFVTTIVGLYGMCLQA--NSGKVW 472

Query: 198 LNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVV-VSKCEDKPQ-QRWSLNA 257
           L  C +    Q+WALYADG+IR   NR+ CLT++ N   +VV +  C      QRW    
Sbjct: 473 LEDCTSEKAEQQWALYADGSIRPQQNRDNCLTTDANIKGTVVKILSCGPASSGQRWMFK- 532

Query: 258 KDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHP-DGSASQRW 292
            D TI +    +VLDV     S   +++   HP  G+ +Q W
Sbjct: 533 NDGTILNLYNGLVLDVRRSDPSLKQIIV---HPFHGNLNQIW 560

BLAST of CsGy3G018790 vs. TrEMBL
Match: tr|A0A0A0LAC2|A0A0A0LAC2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217140 PE=4 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 9.7e-171
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60

Query: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120
           GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS
Sbjct: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120

Query: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180
           NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL
Sbjct: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180

Query: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240
           CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED
Sbjct: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240

Query: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTMN 295
           KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTMN
Sbjct: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTMN 294

BLAST of CsGy3G018790 vs. TrEMBL
Match: tr|A0A0A0L9D1|A0A0A0L9D1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217160 PE=4 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 4.5e-144
Identity = 253/293 (86.35%), Postives = 268/293 (91.47%), Query Frame = 0

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM     YKPA
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM--SPWYKPA 60

Query: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120
           GINFPTRL PCDEKKQTQLWT+VGDGTIRPMND+FCLAA+VFYGVINKAVVSECGKVSD 
Sbjct: 61  GINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDP 120

Query: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180
           NK+W  KNDGTIAL +SRMVLTGD DYVTLQS KYTPSQSWEVTESLN MVANIEWLNNL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180

Query: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240
           CLQSTDDSS+VGLNGCNT  KYQRWALYADGTIRQHVN+NYCLTS+Q++ R VVVSKCED
Sbjct: 181 CLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCED 240

Query: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTM 294
           KPQQRWSL+AKD TIDHPNT+MVLDV +V DS  P V+VTN  DGSASQRWT+
Sbjct: 241 KPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

BLAST of CsGy3G018790 vs. TrEMBL
Match: tr|Q9SLV9|Q9SLV9_CUCSA (XSP30 OS=Cucumis sativus OX=3659 GN=XSP30 PE=2 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 1.3e-143
Identity = 252/293 (86.01%), Postives = 267/293 (91.13%), Query Frame = 0

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSIIVAFSLTTQL IAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM     YKPA
Sbjct: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEM--SPWYKPA 60

Query: 61  GINFPTRLLPCDEKKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSDS 120
           GINFPTRL PCDEKKQTQLWT+VGDGTIRPMND+FCLAA+VFYGVINKAVVSECGKVSD 
Sbjct: 61  GINFPTRLSPCDEKKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDP 120

Query: 121 NKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNNL 180
           NK+W  KNDGTIAL +SRMVLTGD DYVTLQS KYTPSQSWEVTESLN MVANIEWLNNL
Sbjct: 121 NKKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNL 180

Query: 181 CLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCED 240
           CLQSTDDSS+VGLNGCNT  KYQRWALYADGTIRQHVN+NYCLTS+Q++ R VVVSKCED
Sbjct: 181 CLQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCED 240

Query: 241 KPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTM 294
           KPQQRWSL+AKD TIDHPNT+MVLDV +V DS  P V+VTN  DGSASQRWT+
Sbjct: 241 KPQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

BLAST of CsGy3G018790 vs. TrEMBL
Match: tr|A0A1S4E0X9|A0A1S4E0X9_CUCME (nigrin b-like OS=Cucumis melo OX=3656 GN=LOC103496121 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 3.8e-119
Identity = 219/295 (74.24%), Postives = 239/295 (81.02%), Query Frame = 0

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSIIVAFSLTT L +AVP NYGYG  YGGVP ATHLVGRDGLCLEM     +   
Sbjct: 1   MKEIVLSIIVAFSLTTHLAMAVPSNYGYGGEYGGVPRATHLVGRDGLCLEM---SPWFYR 60

Query: 61  GINFPTRLLPCDE-KKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSD 120
           G NFPTRL PCDE KKQTQLWTVVGDGTIRPMND+FCL ADV  G+INKAVV EC K  +
Sbjct: 61  GNNFPTRLSPCDEHKKQTQLWTVVGDGTIRPMNDKFCLVADVLVGLINKAVVRECAKEPN 120

Query: 121 SNKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNN 180
           SNK+W HK DGTI   ES MVLTGDSDYVTLQS K TPSQSWE TES  PM+ANIEWLNN
Sbjct: 121 SNKRWTHKKDGTITHVESGMVLTGDSDYVTLQSNKNTPSQSWEATESSTPMIANIEWLNN 180

Query: 181 LCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCE 240
           LCLQSTDDS++VGLNGCN   K QRWALY DGTIRQ+VNRNYCLTS++   R +V+SKCE
Sbjct: 181 LCLQSTDDSNHVGLNGCNRENKDQRWALYGDGTIRQNVNRNYCLTSDEYLGRFIVMSKCE 240

Query: 241 DKPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRWTMN 295
           DKPQQRW+L AKDSTIDHPN++MV+DVL V        +VTN  DGSASQRWT+N
Sbjct: 241 DKPQQRWNLGAKDSTIDHPNSDMVMDVLFVPYYDFSSAVVTNRRDGSASQRWTIN 292

BLAST of CsGy3G018790 vs. TrEMBL
Match: tr|A0A0A0L756|A0A0A0L756_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G219180 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 3.9e-103
Identity = 194/292 (66.44%), Postives = 224/292 (76.71%), Query Frame = 0

Query: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMVLLRSYKPA 60
           MKEIVLSI+VAFSLTT L +AVP +YGY V    VPGATHLVGRDGLCLEM     +   
Sbjct: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEM---SPWFYK 60

Query: 61  GINFPTRLLPCDE-KKQTQLWTVVGDGTIRPMNDRFCLAADVFYGVINKAVVSECGKVSD 120
           G NFPTRL PC+E KKQTQLWTV+ D TIRPMNDR+CL + V    I   VVSEC K   
Sbjct: 61  GSNFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPH 120

Query: 121 SNKQWIHKNDGTIALAESRMVLTGDSDYVTLQSIKYTPSQSWEVTESLNPMVANIEWLNN 180
           SNK+WIHK D TI    S MVLTG+S+YVT+Q  K  PSQSWE T+SL PMVANI+WL N
Sbjct: 121 SNKKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLEN 180

Query: 181 LCLQSTDDSSNVGLNGCNTYTKYQRWALYADGTIRQHVNRNYCLTSEQNYDRSVVVSKCE 240
           LCLQST DS+ V L+GCN+  K Q W+LY DGTIR+HVNRNYCLTSEQ++ R V VSKCE
Sbjct: 181 LCLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCE 240

Query: 241 DKPQQRWSLNAKDSTIDHPNTNMVLDVLNVLDSASPLVIVTNHPDGSASQRW 292
           DKPQQRW L A+D+TI+HPNT+MV+DVL+V     PL +VTNH DG+A+QRW
Sbjct: 241 DKPQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRW 285

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004151509.21.5e-170100.00PREDICTED: nigrin b-like [Cucumis sativus] >KGN57577.1 hypothetical protein Csa_... [more]
KGN57579.16.8e-14486.35hypothetical protein Csa_3G217160 [Cucumis sativus][more]
NP_001274403.12.0e-14386.01uncharacterized protein LOC101221335 precursor [Cucumis sativus] >BAA88294.1 XSP... [more]
XP_016901886.15.8e-11974.24PREDICTED: nigrin b-like [Cucumis melo][more]
XP_004146289.15.8e-10366.44PREDICTED: nigrin b-like [Cucumis sativus] >KGN57583.1 hypothetical protein Csa_... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
sp|P33183|NIGB_SAMNI1.2e-2731.52Nigrin b OS=Sambucus nigra OX=4202 PE=1 SV=2[more]
sp|Q41358|SNAIB_SAMNI3.9e-2631.89Ribosome-inactivating protein SNAI OS=Sambucus nigra OX=4202 GN=SNA-I PE=1 SV=1[more]
sp|O22415|SNAIF_SAMNI1.3e-2431.89Ribosome-inactivating protein SNAIf OS=Sambucus nigra OX=4202 GN=SNA-If PE=1 SV=... [more]
sp|P02879|RICI_RICCO9.1e-2332.03Ricin OS=Ricinus communis OX=3988 PE=1 SV=1[more]
sp|P06750|AGGL_RICCO3.8e-2131.21Agglutinin OS=Ricinus communis OX=3988 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0LAC2|A0A0A0LAC2_CUCSA9.7e-171100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217140 PE=4 SV=1[more]
tr|A0A0A0L9D1|A0A0A0L9D1_CUCSA4.5e-14486.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217160 PE=4 SV=1[more]
tr|Q9SLV9|Q9SLV9_CUCSA1.3e-14386.01XSP30 OS=Cucumis sativus OX=3659 GN=XSP30 PE=2 SV=1[more]
tr|A0A1S4E0X9|A0A1S4E0X9_CUCME3.8e-11974.24nigrin b-like OS=Cucumis melo OX=3656 GN=LOC103496121 PE=4 SV=1[more]
tr|A0A0A0L756|A0A0A0L756_CUCSA3.9e-10366.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G219180 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR035992Ricin_B-like_lectins
IPR000772Ricin_B_lectin
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G018790.1CsGy3G018790.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000772Ricin B, lectin domainSMARTSM00458ricin_3coord: 36..164
e-value: 1.9E-6
score: 37.4
coord: 168..294
e-value: 2.3E-18
score: 77.0
IPR000772Ricin B, lectin domainPFAMPF00652Ricin_B_lectincoord: 178..291
e-value: 1.2E-21
score: 77.1
coord: 42..161
e-value: 6.5E-13
score: 49.0
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 167..294
score: 28.42
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 35..164
score: 18.883
IPR000772Ricin B, lectin domainCDDcd00161RICINcoord: 178..293
e-value: 2.62337E-20
score: 83.3238
IPR000772Ricin B, lectin domainCDDcd00161RICINcoord: 40..162
e-value: 2.28368E-15
score: 69.4566
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 169..294
e-value: 9.4E-29
score: 101.7
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 36..164
e-value: 3.8E-19
score: 70.8
IPR035992Ricin B-like lectinsSUPERFAMILYSSF50370Ricin B-like lectinscoord: 39..163
IPR035992Ricin B-like lectinsSUPERFAMILYSSF50370Ricin B-like lectinscoord: 173..293