Cla012895 (gene) Watermelon (97103) v1

NameCla012895
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionCysteine proteinase inhibitor 1 (AHRD V1 *-*- CYT1_ACTDE); contains Interpro domain(s) IPR001841 Zinc finger, RING-type
LocationChr9 : 20273897 .. 20274274 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTCTACCGTGCTCGCCAACATCGGTCAACATGATCCCATCCTCCACGTGACAAAGAATACGACGAAGGGCGATGAACAGTCCGAATGGATATCGATTCGTGCTATTGAAGATCCTTACGTGCAAGAAGTTGCAAAGTTTGCAGTGACAGAGTTTGATAAGGAAAAAATGGCAAAGTTTCAATACAAGCACTTGCTACGTTGTTGGATTAAGGAGGAAATGGGAGGCATAAAATATCGCCTTATATTAGAGGTAACTAAAGAAGGAAAAGTTGAGGGTAAATATGAAGCTATTGTATGGGAAGCTTCTGGCCGTCTGATTATAAGGAAGCTTAAGCTTATATCTTTTATGCCTTGTATTCATGGGGCTGAATGA

mRNA sequence

ATGATTTCTACCGTGCTCGCCAACATCGGTCAACATGATCCCATCCTCCACGTGACAAAGAATACGACGAAGGGCGATGAACAGTCCGAATGGATATCGATTCGTGCTATTGAAGATCCTTACGTGCAAGAAGTTGCAAAGTTTGCAGTGACAGAGTTTGATAAGGAAAAAATGGCAAAGTTTCAATACAAGCACTTGCTACGTTGTTGGATTAAGGAGGAAATGGGAGGCATAAAATATCGCCTTATATTAGAGGTAACTAAAGAAGGAAAAGTTGAGGGTAAATATGAAGCTATTGTATGGGAAGCTTCTGGCCGTCTGATTATAAGGAAGCTTAAGCTTATATCTTTTATGCCTTGTATTCATGGGGCTGAATGA

Coding sequence (CDS)

ATGATTTCTACCGTGCTCGCCAACATCGGTCAACATGATCCCATCCTCCACGTGACAAAGAATACGACGAAGGGCGATGAACAGTCCGAATGGATATCGATTCGTGCTATTGAAGATCCTTACGTGCAAGAAGTTGCAAAGTTTGCAGTGACAGAGTTTGATAAGGAAAAAATGGCAAAGTTTCAATACAAGCACTTGCTACGTTGTTGGATTAAGGAGGAAATGGGAGGCATAAAATATCGCCTTATATTAGAGGTAACTAAAGAAGGAAAAGTTGAGGGTAAATATGAAGCTATTGTATGGGAAGCTTCTGGCCGTCTGATTATAAGGAAGCTTAAGCTTATATCTTTTATGCCTTGTATTCATGGGGCTGAATGA

Protein sequence

MISTVLANIGQHDPILHVTKNTTKGDEQSEWISIRAIEDPYVQEVAKFAVTEFDKEKMAKFQYKHLLRCWIKEEMGGIKYRLILEVTKEGKVEGKYEAIVWEASGRLIIRKLKLISFMPCIHGAE
BLAST of Cla012895 vs. Swiss-Prot
Match: CYT7_ORYSJ (Putative cysteine proteinase inhibitor 7 OS=Oryza sativa subsp. japonica GN=Os03g0210100 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 8.5e-07
Identity = 32/83 (38.55%), Postives = 46/83 (55.42%), Query Frame = 1

Query: 37  IEDPYVQEVAKFAVTEFDKEKMAKFQYKHLLRCWIKEEMGGIKYRLILEVTKEGKVEGKY 96
           I DP+VQE+ ++AV E D+   A       +    K+ + G+ YRL LE +  G  +G+Y
Sbjct: 35  INDPHVQELGRWAVAEEDRGVAAGGLTFERVTDGEKQVVAGVNYRLTLEASSSGAKDGRY 94

Query: 97  EAIVWEASGRLIIRKLKLISFMP 120
           EA+V+E   R   R  KL+SF P
Sbjct: 95  EAVVYEQDPRSNAR--KLVSFEP 115

BLAST of Cla012895 vs. Swiss-Prot
Match: CYT1_ACTDE (Cysteine proteinase inhibitor 1 OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 8.5e-07
Identity = 27/72 (37.50%), Postives = 44/72 (61.11%), Query Frame = 1

Query: 31  WISIRAIEDPYVQEVAKFAVTEFDKEKMAKFQYKHLLRCWIKEEMGGIKYRLILEVTKEG 90
           W  I ++    VQ+VA+FAV+E +K+   + QY+ ++R +  + + G  YRL++   K+G
Sbjct: 32  WRPIESLNSAEVQDVAQFAVSEHNKQANDELQYQSVVRGY-TQVVAGTNYRLVI-AAKDG 91

Query: 91  KVEGKYEAIVWE 103
            V G YEA+VW+
Sbjct: 92  AVVGNYEAVVWD 101

BLAST of Cla012895 vs. TrEMBL
Match: A0A0A0K644_CUCSA (Cystatin domain containing protein OS=Cucumis sativus GN=Csa_7G066240 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.2e-54
Identity = 105/124 (84.68%), Postives = 114/124 (91.94%), Query Frame = 1

Query: 1   MISTVLANIGQHDPILHVTKNTTKGDEQSEWISIRAIEDPYVQEVAKFAVTEFDKEKMAK 60
           MIST+LAN+GQHDPILHVT   TKGD QSEWISIRAIEDPYVQEVAKFA+ EF+KEKMA+
Sbjct: 1   MISTLLANVGQHDPILHVTSKDTKGDHQSEWISIRAIEDPYVQEVAKFAMREFEKEKMAR 60

Query: 61  FQYKHLLRCWIKEEMGGIKYRLILEVTKEGKVEGKYEAIVWEASGRLIIRKLKLISFMPC 120
           FQYK LL CWIKEEMGGIKYRL+LEV KE K+EGKYEA+VWEASGRLIIRKLKLISFMP 
Sbjct: 61  FQYKRLLSCWIKEEMGGIKYRLVLEVIKEEKLEGKYEAVVWEASGRLIIRKLKLISFMPS 120

Query: 121 IHGA 125
           +HGA
Sbjct: 121 MHGA 124

BLAST of Cla012895 vs. TrEMBL
Match: A0A0B4ZWL9_MORAL (Cysteine proteinase inhibitor OS=Morus alba var. atropurpurea PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.6e-06
Identity = 28/72 (38.89%), Postives = 46/72 (63.89%), Query Frame = 1

Query: 31  WISIRAIEDPYVQEVAKFAVTEFDKEKMAKFQYKHLLRCWIKEEMGGIKYRLILEVTKEG 90
           W  I+ + DP+V+E+A FAV+E++K+  A  + K +++    + + G  YRL+L V K G
Sbjct: 29  WTPIKDLSDPHVKEIANFAVSEYNKQSKASLKLKSIVK-GETQVVAGTNYRLVLAV-KNG 88

Query: 91  KVEGKYEAIVWE 103
               +YEA+VWE
Sbjct: 89  ATAERYEAVVWE 98

BLAST of Cla012895 vs. TrEMBL
Match: A0A0D2SVE6_GOSRA (Cysteine proteinase inhibitor OS=Gossypium raimondii GN=B456_010G187300 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.6e-06
Identity = 31/87 (35.63%), Postives = 51/87 (58.62%), Query Frame = 1

Query: 18  VTKNTTKGDEQSEWISIRAIEDPYVQEVAKFAVTEFDKEKMAKFQYKHLLRCWIKEEMGG 77
           +  +  KG     W  I+ I+DP+V E+A+FAV E++K   +    + +++    + + G
Sbjct: 20  IFSDAKKGPIIGGWTRIKDIKDPHVTEIAEFAVNEYNKLSSSSLVLQKVVK-GETQVVAG 79

Query: 78  IKYRLILEVTKEGKVEGKYEAIVWEAS 105
           I YRL+L+  K G V  KY+A+VWE S
Sbjct: 80  INYRLVLK-AKNGSVAKKYQAVVWEKS 104

BLAST of Cla012895 vs. NCBI nr
Match: gi|700188534|gb|KGN43767.1| (Cystatin domain containing protein [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 3.2e-54
Identity = 105/124 (84.68%), Postives = 114/124 (91.94%), Query Frame = 1

Query: 1   MISTVLANIGQHDPILHVTKNTTKGDEQSEWISIRAIEDPYVQEVAKFAVTEFDKEKMAK 60
           MIST+LAN+GQHDPILHVT   TKGD QSEWISIRAIEDPYVQEVAKFA+ EF+KEKMA+
Sbjct: 1   MISTLLANVGQHDPILHVTSKDTKGDHQSEWISIRAIEDPYVQEVAKFAMREFEKEKMAR 60

Query: 61  FQYKHLLRCWIKEEMGGIKYRLILEVTKEGKVEGKYEAIVWEASGRLIIRKLKLISFMPC 120
           FQYK LL CWIKEEMGGIKYRL+LEV KE K+EGKYEA+VWEASGRLIIRKLKLISFMP 
Sbjct: 61  FQYKRLLSCWIKEEMGGIKYRLVLEVIKEEKLEGKYEAVVWEASGRLIIRKLKLISFMPS 120

Query: 121 IHGA 125
           +HGA
Sbjct: 121 MHGA 124

BLAST of Cla012895 vs. NCBI nr
Match: gi|502184098|ref|XP_004517283.1| (PREDICTED: cysteine proteinase inhibitor 5-like [Cicer arietinum])

HSP 1 Score: 62.8 bits (151), Expect = 5.0e-07
Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = 1

Query: 15  ILHVTKNTTKGDEQSEWISIRAIEDPYVQEVAKFAVTEFDKEKMAKFQYKHLLRCWIKEE 74
           +L  +K T        W  I  I DP+V +VA FAVTE+DK   AK +++ +++    + 
Sbjct: 12  VLLASKTTRNEAIPGGWSPIENINDPHVTDVANFAVTEYDKRSGAKLKFEKVIK-GESQV 71

Query: 75  MGGIKYRLILEVTKEGKVEGKYEAIVWEASGRLIIRKLKLISFM 119
           + G  YRL+L    +G V   YEA+VWE   ++ +R   L SF+
Sbjct: 72  VSGANYRLVLS-ANDGSVSNHYEAVVWE---KVWLRFRNLTSFV 110

BLAST of Cla012895 vs. NCBI nr
Match: gi|746657137|gb|AJD79055.1| (CPI-4 [Morus alba var. atropurpurea])

HSP 1 Score: 58.5 bits (140), Expect = 9.4e-06
Identity = 28/72 (38.89%), Postives = 46/72 (63.89%), Query Frame = 1

Query: 31  WISIRAIEDPYVQEVAKFAVTEFDKEKMAKFQYKHLLRCWIKEEMGGIKYRLILEVTKEG 90
           W  I+ + DP+V+E+A FAV+E++K+  A  + K +++    + + G  YRL+L V K G
Sbjct: 29  WTPIKDLSDPHVKEIANFAVSEYNKQSKASLKLKSIVK-GETQVVAGTNYRLVLAV-KNG 88

Query: 91  KVEGKYEAIVWE 103
               +YEA+VWE
Sbjct: 89  ATAERYEAVVWE 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CYT7_ORYSJ8.5e-0738.55Putative cysteine proteinase inhibitor 7 OS=Oryza sativa subsp. japonica GN=Os03... [more]
CYT1_ACTDE8.5e-0737.50Cysteine proteinase inhibitor 1 OS=Actinidia deliciosa PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0K644_CUCSA2.2e-5484.68Cystatin domain containing protein OS=Cucumis sativus GN=Csa_7G066240 PE=4 SV=1[more]
A0A0B4ZWL9_MORAL6.6e-0638.89Cysteine proteinase inhibitor OS=Morus alba var. atropurpurea PE=2 SV=1[more]
A0A0D2SVE6_GOSRA8.6e-0635.63Cysteine proteinase inhibitor OS=Gossypium raimondii GN=B456_010G187300 PE=3 SV=... [more]
Match NameE-valueIdentityDescription
gi|700188534|gb|KGN43767.1|3.2e-5484.68Cystatin domain containing protein [Cucumis sativus][more]
gi|502184098|ref|XP_004517283.1|5.0e-0735.58PREDICTED: cysteine proteinase inhibitor 5-like [Cicer arietinum][more]
gi|746657137|gb|AJD79055.1|9.4e-0638.89CPI-4 [Morus alba var. atropurpurea][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR020381Proteinase inhibitor I25, cystatin, conserved region
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0010951 negative regulation of endopeptidase activity
biological_process GO:0010466 negative regulation of peptidase activity
cellular_component GO:0044464 cell part
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity
molecular_function GO:0030414 peptidase inhibitor activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU05955watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU35007watermelon unigene v2 vs TrEMBLtranscribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012895Cla012895.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU35007WMU35007transcribed_cluster
WMU05955WMU05955transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020381Proteinase inhibitor I25, cystatin, conserved regionPRODOMPD001231coord: 42..102
score: 8.
IPR020381Proteinase inhibitor I25, cystatin, conserved regionPFAMPF16845SQAPIcoord: 34..117
score: 3.4
NoneNo IPR availableGENE3DG3DSA:3.10.450.10coord: 35..103
score: 1.
NoneNo IPR availableunknownSSF54403Cystatin/monellincoord: 31..119
score: 1.08

The following gene(s) are paralogous to this gene:

None