Cla011701 (gene) Watermelon (97103) v1

Overview
NameCla011701
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr7 : 11904064 .. 11904447 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCATCCAACCCCAGCCTTGCTATGCTCTCCTCACCCTCAGCTTGTTCTTGTTCTTCATTCTTTCAAGCAATGTACAACCCATCCATTGCTTGACCTCATCCAAGAAGCTTGACGAATCCGCCGGTGGGAGTGATCCGAGCGTCAAGTGTACGCCGTGCACCAATTATCCGCCACCACCACCGCCACCGCCGAAGAAACCCCCACCAGCTTATTGCCCTCCGCCACCTCCTCCTCCGTCATCTTTCATATACATGCTCGGCCCGCCAGGAAACTTGTATCCCATTGACCAAGATTTCGCCGGTGCTAATCGGAGGACGATGGCCGTGGAGTGGACGGTGGTTGCTCTCTTTGGACTAATTGGGTTTATTGGTTTGTGGTGA

mRNA sequence

ATGTGCATCCAACCCCAGCCTTGCTATGCTCTCCTCACCCTCAGCTTGTTCTTGTTCTTCATTCTTTCAAGCAATGTACAACCCATCCATTGCTTGACCTCATCCAAGAAGCTTGACGAATCCGCCGGTGGGAGTGATCCGAGCGTCAAGTGTACGCCGTGCACCAATTATCCGCCACCACCACCGCCACCGCCGAAGAAACCCCCACCAGCTTATTGCCCTCCGCCACCTCCTCCTCCGTCATCTTTCATATACATGCTCGGCCCGCCAGGAAACTTGTATCCCATTGACCAAGATTTCGCCGGTGCTAATCGGAGGACGATGGCCGTGGAGTGGACGGTGGTTGCTCTCTTTGGACTAATTGGGTTTATTGGTTTGTGGTGA

Coding sequence (CDS)

ATGTGCATCCAACCCCAGCCTTGCTATGCTCTCCTCACCCTCAGCTTGTTCTTGTTCTTCATTCTTTCAAGCAATGTACAACCCATCCATTGCTTGACCTCATCCAAGAAGCTTGACGAATCCGCCGGTGGGAGTGATCCGAGCGTCAAGTGTACGCCGTGCACCAATTATCCGCCACCACCACCGCCACCGCCGAAGAAACCCCCACCAGCTTATTGCCCTCCGCCACCTCCTCCTCCGTCATCTTTCATATACATGCTCGGCCCGCCAGGAAACTTGTATCCCATTGACCAAGATTTCGCCGGTGCTAATCGGAGGACGATGGCCGTGGAGTGGACGGTGGTTGCTCTCTTTGGACTAATTGGGTTTATTGGTTTGTGGTGA

Protein sequence

MCIQPQPCYALLTLSLFLFFILSSNVQPIHCLTSSKKLDESAGGSDPSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFAGANRRTMAVEWTVVALFGLIGFIGLW
Homology
[Close]
BLAST of Cla011701 vs. Swiss-Prot
Match: LRX6_ARATH (Leucine-rich repeat extensin-like protein 6 OS=Arabidopsis thaliana GN=LRX6 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.0e-08
Identity = 27/57 (47.37%), Postives = 30/57 (52.63%), Query Frame = 1 

Query: 34  SSKKLDESAGGSDPSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           SS  +D ++ G  P     P    PPPPPPPP  PPP   PPPPPPP  ++Y   PP
Sbjct: 363 SSYPIDCASFGCSPPSPPPP----PPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPP 415


HSP 2 Score: 56.2 bits (134), Expect = 3.0e-07
Identity = 25/48 (52.08%), Postives = 26/48 (54.17%), Query Frame = 1 

Query: 48  SVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYP 96
           S  C+P +  PPPPPPPP  PPP   PPPPPPP        PP  +YP
Sbjct: 371 SFGCSPPSPPPPPPPPPPPPPPPPPPPPPPPPPP-------PPPYVYP 411


HSP 3 Score: 55.1 bits (131), Expect = 6.6e-07
Identity = 23/40 (57.50%), Postives = 24/40 (60.00%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPPS--SFIYMLGPPGNLYP 96
           PPPPPPPP  PP  Y  PPPPPPS   ++Y   PP  +YP
Sbjct: 396 PPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYP 435


HSP 4 Score: 50.1 bits (118), Expect = 2.1e-05
Identity = 22/38 (57.89%), Postives = 21/38 (55.26%), Query Frame = 1 

Query: 57  YPPPPPPPPKKPPPAYCPPPP----PPPSSFIYMLGPP 91
           YP PPPPPP  PP  Y PPPP    PPP S  Y+  PP
Sbjct: 410 YPSPPPPPPSPPPYVYPPPPPPYVYPPPPSPPYVYPPP 447


HSP 5 Score: 47.4 bits (111), Expect = 1.4e-04
Identity = 22/42 (52.38%), Postives = 22/42 (52.38%), Query Frame = 1 

Query: 57  YPPPPPP---PPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYP 96
           YPPPPPP   PP   PP   PPPPP P  ++Y   PP N  P
Sbjct: 425 YPPPPPPYVYPPPPSPPYVYPPPPPSPQPYMYP-SPPCNDLP 465

[Close]
BLAST of Cla011701 vs. Swiss-Prot
Match: LRX3_ARATH (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana GN=LRX3 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.6e-07
Identity = 22/36 (61.11%), Postives = 20/36 (55.56%), Query Frame = 1 

Query: 45  SDPSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPP 81
           S P     P   Y PPPPPPP  PPP Y PPPPPPP
Sbjct: 437 SPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPP 472


HSP 2 Score: 54.3 bits (129), Expect = 1.1e-06
Identity = 22/35 (62.86%), Postives = 21/35 (60.00%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPP--PPPPSSFIYMLGPP 91
           PPPPPPPP  PPP Y PPP  PPPP   +Y   PP
Sbjct: 466 PPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPP 500


HSP 3 Score: 52.0 bits (123), Expect = 5.6e-06
Identity = 20/34 (58.82%), Postives = 19/34 (55.88%), Query Frame = 1 

Query: 57  YPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           Y PPPP PP  PPP Y PPPPPPP     +  PP
Sbjct: 480 YSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPP 513


HSP 4 Score: 51.6 bits (122), Expect = 7.3e-06
Identity = 22/36 (61.11%), Postives = 20/36 (55.56%), Query Frame = 1 

Query: 47  PSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPPSS 83
           PS    P   Y PPPPPPP  PPP Y PPPPP  SS
Sbjct: 485 PSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSS 520


HSP 5 Score: 51.6 bits (122), Expect = 7.3e-06
Identity = 23/46 (50.00%), Postives = 23/46 (50.00%), Query Frame = 1 

Query: 45  SDPSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           + P     P   Y PPPPPPP  PPP Y PPPPPPP     +  PP
Sbjct: 424 TSPPPPSPPPPVYSPPPPPPP--PPPVYSPPPPPPPPPPPPVYSPP 467


HSP 6 Score: 49.7 bits (117), Expect = 2.8e-05
Identity = 23/53 (43.40%), Postives = 22/53 (41.51%), Query Frame = 1 

Query: 47  PSVKCTPCTNYPPP---------PPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           P     P    PPP         PPPPP  PPP Y PPPPPPP     +  PP
Sbjct: 415 PIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPP 467


HSP 7 Score: 38.5 bits (88), Expect = 6.4e-02
Identity = 19/48 (39.58%), Postives = 20/48 (41.67%), Query Frame = 1 

Query: 58  PPP-------------PPPPPKKPPPAYCPPPP--PPPSSFIYMLGPP 91
           PPP              PPPP   PP + PPPP  PPP  + Y+  PP
Sbjct: 546 PPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPPPIYPYLSPPP 593

[Close]
BLAST of Cla011701 vs. Swiss-Prot
Match: ZFHX4_HUMAN (Zinc finger homeobox protein 4 OS=Homo sapiens GN=ZFHX4 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-06
Identity = 25/53 (47.17%), Postives = 26/53 (49.06%), Query Frame = 1 

Query: 47   PSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQD 100
            P+   TP    PP PPPPP  PPP   PPPPPPPS+      PP    P+  D
Sbjct: 1983 PNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPPPSA------PPQVQLPVSLD 2029

[Close]
BLAST of Cla011701 vs. Swiss-Prot
Match: ALG13_HUMAN (Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 OS=Homo sapiens GN=ALG13 PE=1 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-06
Identity = 22/38 (57.89%), Postives = 21/38 (55.26%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYP 96
           PPPPPPPP  PPP   PPPPPPP      +G   NL P
Sbjct: 920 PPPPPPPPPPPPPPPPPPPPPPPPPPALDVGETSNLQP 957


HSP 2 Score: 46.2 bits (108), Expect = 3.1e-04
Identity = 22/55 (40.00%), Postives = 23/55 (41.82%), Query Frame = 1 

Query: 26  VQPIHCLTSSKKLDESAGGSDPSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPP 81
           +QP+     +      A  S P     P      PPPPPP  PPP   PPPPPPP
Sbjct: 885 IQPLFVSPPTHGRPVIASPSYPCHSAIPHAGASLPPPPPPPPPPPPPPPPPPPPP 939

[Close]
BLAST of Cla011701 vs. Swiss-Prot
Match: PRR12_MOUSE (Proline-rich protein 12 OS=Mus musculus GN=Prr12 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.3e-06
Identity = 20/35 (57.14%), Postives = 21/35 (60.00%), Query Frame = 1 

Query: 47   PSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPPS 82
            P+   TP  + PPPPPPPP  PP    PPPPPPP+
Sbjct: 1477 PTPLVTPVASSPPPPPPPPPPPPALPSPPPPPPPA 1511


HSP 2 Score: 43.1 bits (100), Expect = 2.6e-03
Identity = 24/58 (41.38%), Postives = 27/58 (46.55%), Query Frame = 1 

Query: 23   SSNVQPIHCLTSSKKLDESAGGSDPSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPP 81
            +S   P+  L SS     S+G  +P +        PPP PPP   P PA  PPPPPPP
Sbjct: 1421 ASGPPPLPSLPSSN----SSGTPEPPL----LEEKPPPTPPPAPTPQPAPPPPPPPPP 1470

[Close]
BLAST of Cla011701 vs. TrEMBL
Match: U5G8W7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s02110g PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.9e-06
Identity = 28/50 (56.00%), Postives = 29/50 (58.00%), Query Frame = 1 

Query: 31  CLTSSKKLDESAGGSDPSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPP 81
           C    KK     GG  P+VKC   T  PPPPPPPP  PPP   PPPPPPP
Sbjct: 55  CPEKIKKKIYCKGG--PTVKCIVITPPPPPPPPPPPPPPPPPPPPPPPPP 102

[Close]
BLAST of Cla011701 vs. TrEMBL
Match: U5G8W7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s02110g PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.8e-04
Identity = 28/56 (50.00%), Postives = 29/56 (51.79%), Query Frame = 1 

Query: 31  CLTSSKKLDESAGGSDPSVKCT------PCTNYPPPPPPPPKKPPPAYCPPPPPPP 81
           C    KK     GG  P+VKC       P    PPPPPPPP  PPP   PPPPPPP
Sbjct: 55  CPEKIKKKIYCKGG--PTVKCIVITPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 108


HSP 2 Score: 49.7 bits (117), Expect = 3.1e-03
Identity = 18/23 (78.26%), Postives = 18/23 (78.26%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPP 81
           PPPPPPPP  PPP   PPPPPPP
Sbjct: 103 PPPPPPPPPPPPPPPPPPPPPPP 125


HSP 3 Score: 49.7 bits (117), Expect = 3.1e-03
Identity = 18/23 (78.26%), Postives = 18/23 (78.26%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPP 81
           PPPPPPPP  PPP   PPPPPPP
Sbjct: 100 PPPPPPPPPPPPPPPPPPPPPPP 122


HSP 4 Score: 49.7 bits (117), Expect = 3.1e-03
Identity = 18/23 (78.26%), Postives = 18/23 (78.26%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPP 81
           PPPPPPPP  PPP   PPPPPPP
Sbjct: 97  PPPPPPPPPPPPPPPPPPPPPPP 119


HSP 5 Score: 59.3 bits (142), Expect = 3.9e-06
Identity = 25/47 (53.19%), Postives = 27/47 (57.45%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFAGAN 105
           PPPPPPPP  PP AYCPPPPPPP      +  P  L    + F  AN
Sbjct: 106 PPPPPPPPPPPPIAYCPPPPPPPPGCSNCIYSPHALISSGETFIAAN 152

[Close]
BLAST of Cla011701 vs. TrEMBL
Match: A0A163GJS0_DIDRA (Uncharacterized protein OS=Didymella rabiei GN=ST47_g3963 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.4e-05
Identity = 29/72 (40.28%), Postives = 31/72 (43.06%), Query Frame = 1 

Query: 44  GSDPSVKCTPCTNYPPPPPPPPKKPPP-----------AYCPPPPPPPSSFIYMLGPPGN 103
           G  P     P    PPPPPPPP  PPP           AYCPPPPPPP      +  P  
Sbjct: 81  GPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPIAYCPPPPPPPPGCSNCIYSPHA 140

Query: 104 LYPIDQDFAGAN 105
           L    + F  AN
Sbjct: 141 LISSGETFIAAN 152


HSP 2 Score: 48.1 bits (113), Expect = 9.0e-03
Identity = 19/29 (65.52%), Postives = 19/29 (65.52%), Query Frame = 1 

Query: 52  TPCTNYPPPPPPPPKKPPPAYCPPPPPPP 81
           TP     PPPPPPP  PPP   PPPPPPP
Sbjct: 75  TPSPLSGPPPPPPPPPPPPPPPPPPPPPP 103


HSP 3 Score: 59.3 bits (142), Expect = 3.9e-06
Identity = 32/75 (42.67%), Postives = 35/75 (46.67%), Query Frame = 1 

Query: 42  AGGSDPSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLYPIDQDFA 101
           AGG DP     P    PPPPPPPP  PPP   PPPPPPP        PP N  P+    A
Sbjct: 258 AGGVDPITLPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPTPPPPPVNDPPVGSGAA 317

Query: 102 GANRRTMAVEWTVVA 117
                T    +T+ A
Sbjct: 318 LTAPGTEGTPYTITA 332

[Close]
BLAST of Cla011701 vs. TrEMBL
Match: V6F0M2_9PROT (Uncharacterized protein OS=Magnetospirillum gryphiswaldense MSR-1 v2 GN=MGMSRv2__1722 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.1e-04
Identity = 22/41 (53.66%), Postives = 25/41 (60.98%), Query Frame = 1 

Query: 40  ESAGGSDPSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPP 81
           +S G  + +    P T  PPPPPPPP  PPP   PPPPPPP
Sbjct: 250 DSVGNGNGAGGVDPITLPPPPPPPPPPPPPPPPPPPPPPPP 290


HSP 2 Score: 59.3 bits (142), Expect = 3.9e-06
Identity = 25/44 (56.82%), Postives = 28/44 (63.64%), Query Frame = 1 

Query: 47  PSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           PS    P  +YPPPPPPPP  PPP   PPPPPPP   +Y+  PP
Sbjct: 73  PSPPSPPSYSYPPPPPPPPPPPPPPPPPPPPPPPPPPVYL--PP 114

[Close]
BLAST of Cla011701 vs. TrEMBL
Match: A0A0L7QNN2_9HYME (Uncharacterized protein (Fragment) OS=Habropoda laboriosa GN=WH47_09120 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.8e-04
Identity = 20/33 (60.61%), Postives = 22/33 (66.67%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           PPPPPPPP  PPP   PPPPPPP  ++    PP
Sbjct: 196 PPPPPPPPPPPPPPPPPPPPPPPPVYLPPSPPP 228


HSP 2 Score: 52.4 bits (124), Expect = 4.8e-04
Identity = 20/33 (60.61%), Postives = 22/33 (66.67%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           PPPPPPPP  PPP   PPPPPPP  ++    PP
Sbjct: 141 PPPPPPPPPPPPPPPPPPPPPPPPVYLPPSPPP 173


HSP 3 Score: 51.6 bits (122), Expect = 8.2e-04
Identity = 23/44 (52.27%), Postives = 25/44 (56.82%), Query Frame = 1 

Query: 47  PSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           P V   P     PPPPPPP  PPP   PPPPPPP   +Y+  PP
Sbjct: 128 PPVYLPPSPPPAPPPPPPPPPPPPPPPPPPPPPPPPPVYL--PP 169


HSP 4 Score: 51.6 bits (122), Expect = 8.2e-04
Identity = 23/44 (52.27%), Postives = 25/44 (56.82%), Query Frame = 1 

Query: 47  PSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           P V   P     PPPPPPP  PPP   PPPPPPP   +Y+  PP
Sbjct: 183 PPVYLPPSPPPAPPPPPPPPPPPPPPPPPPPPPPPPPVYL--PP 224


HSP 5 Score: 50.1 bits (118), Expect = 2.4e-03
Identity = 24/50 (48.00%), Postives = 26/50 (52.00%), Query Frame = 1 

Query: 53  PCTNY------------PPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           P  NY            PPPPPPPP  PPP   PPPPPPP   +Y+  PP
Sbjct: 67  PTYNYPPSPPSPPSYSYPPPPPPPPPPPPPPPPPPPPPPPPPPVYL--PP 114


HSP 6 Score: 49.3 bits (116), Expect = 4.0e-03
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPP 81
           PP PPPPP+ PPP Y PP PPPP
Sbjct: 227 PPAPPPPPQPPPPVYLPPSPPPP 249


HSP 7 Score: 46.6 bits (109), Expect = 2.6e-02
Identity = 16/22 (72.73%), Postives = 17/22 (77.27%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPP 80
           PP PPPPP+ PPP Y PP PPP
Sbjct: 172 PPAPPPPPQPPPPVYLPPSPPP 193


HSP 8 Score: 46.6 bits (109), Expect = 2.6e-02
Identity = 16/22 (72.73%), Postives = 17/22 (77.27%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPP 80
           PP PPPPP+ PPP Y PP PPP
Sbjct: 117 PPAPPPPPQPPPPVYLPPSPPP 138


HSP 9 Score: 45.8 bits (107), Expect = 4.5e-02
Identity = 20/37 (54.05%), Postives = 22/37 (59.46%), Query Frame = 1 

Query: 58  PPPPPPP----PKKPPPAYCPPPPPPPSSFIYMLGPP 91
           PPPPPPP    P  PPPA  PPP PPP  ++    PP
Sbjct: 157 PPPPPPPPVYLPPSPPPAPPPPPQPPPPVYLPPSPPP 193


HSP 10 Score: 45.8 bits (107), Expect = 4.5e-02
Identity = 20/37 (54.05%), Postives = 22/37 (59.46%), Query Frame = 1 

Query: 58  PPPPPPP----PKKPPPAYCPPPPPPPSSFIYMLGPP 91
           PPPPPPP    P  PPPA  PPP PPP  ++    PP
Sbjct: 102 PPPPPPPPVYLPPSPPPAPPPPPQPPPPVYLPPSPPP 138


HSP 11 Score: 45.8 bits (107), Expect = 4.5e-02
Identity = 20/37 (54.05%), Postives = 22/37 (59.46%), Query Frame = 1 

Query: 58  PPPPPPP----PKKPPPAYCPPPPPPPSSFIYMLGPP 91
           PPPPPPP    P  PPPA  PPP PPP  ++    PP
Sbjct: 212 PPPPPPPPVYLPPSPPPAPPPPPQPPPPVYLPPSPPP 248


HSP 12 Score: 45.1 bits (105), Expect = 7.6e-02
Identity = 27/62 (43.55%), Postives = 29/62 (46.77%), Query Frame = 1 

Query: 47  PSVKCTPCTNYPPPPPPP-------PKK-PPPAYCPP--PPPPPSSFIYMLGPPGNLYPI 99
           P V   P    PPPPPPP       P++ PPPAY PP  PP PP    Y    P  L P 
Sbjct: 238 PPVYLPPSPPPPPPPPPPRRPPSPPPRRPPPPAYFPPSQPPAPPPPIRYSTPAPTYLPPY 297


HSP 13 Score: 44.7 bits (104), Expect = 1.0e-01
Identity = 17/22 (77.27%), Postives = 17/22 (77.27%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPP 80
           PPPPPPPP  PPP Y PP PPP
Sbjct: 98  PPPPPPPP-PPPPVYLPPSPPP 118


HSP 14 Score: 43.9 bits (102), Expect = 1.7e-01
Identity = 19/31 (61.29%), Postives = 19/31 (61.29%), Query Frame = 1 

Query: 53  PCTNYPPPPPPP---PKKPPPAYCPPPPPPP 81
           P    PP PPPP   P  PPPA  PPPPPPP
Sbjct: 173 PAPPPPPQPPPPVYLPPSPPPAPPPPPPPPP 203


HSP 15 Score: 43.9 bits (102), Expect = 1.7e-01
Identity = 19/31 (61.29%), Postives = 19/31 (61.29%), Query Frame = 1 

Query: 53  PCTNYPPPPPPP---PKKPPPAYCPPPPPPP 81
           P    PP PPPP   P  PPPA  PPPPPPP
Sbjct: 118 PAPPPPPQPPPPVYLPPSPPPAPPPPPPPPP 148


HSP 16 Score: 42.7 bits (99), Expect = 3.8e-01
Identity = 16/23 (69.57%), Postives = 17/23 (73.91%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPP 81
           PPP PPPP   PP+  PPPPPPP
Sbjct: 232 PPPQPPPPVYLPPSPPPPPPPPP 254


HSP 17 Score: 58.9 bits (141), Expect = 5.1e-06
Identity = 25/44 (56.82%), Postives = 26/44 (59.09%), Query Frame = 1 

Query: 47  PSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           P+    P   Y PPPPPPP  PPPAY PPPPPPP       GPP
Sbjct: 219 PAYGPPPPPAYGPPPPPPPPPPPPAYSPPPPPPPPPPPAAYGPP 262

[Close]
BLAST of Cla011701 vs. NCBI nr
Match: gi|702274828|ref|XP_010044175.1| (PREDICTED: leucine-rich repeat extensin-like protein 2 [Eucalyptus grandis])

HSP 1 Score: 101.7 bits (252), Expect = 9.9e-19
Identity = 59/136 (43.38%), Postives = 71/136 (52.21%), Query Frame = 1 

Query: 11  LLTLSLFLFFILSSNVQPIHCLTSSKKLDESAGGSDPSVKCTPCTNYPPPPPPP-----P 70
           +  L L L  +L+  + P   LTS K  D  A GS     C PCT  PPPPPPP     P
Sbjct: 1   MANLGLLLVLVLAVAI-PTSGLTSRKLDDTPALGSQ---NCNPCTQSPPPPPPPIPCPPP 60

Query: 71  KKPPPAYCPPPP--------------PPPSSFIYMLGPPGNLYPIDQDFAGANRRTMAVE 128
             PPP  CPPPP              PPPS +IY+ GPPG+LYPIDQ F GA  R+ A  
Sbjct: 61  PPPPPTPCPPPPHKKPPPCSYCPLSPPPPSGYIYITGPPGSLYPIDQGFNGAG-RSFAAG 120

[Close]
BLAST of Cla011701 vs. NCBI nr
Match: gi|685289915|ref|XP_009135898.1| (PREDICTED: leucine-rich repeat extensin-like protein 4 [Brassica rapa])

HSP 1 Score: 62.4 bits (150), Expect = 6.6e-07
Identity = 24/37 (64.86%), Postives = 26/37 (70.27%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLY 95
           PPPPPPPP  PPPAY PPPPPPP   +Y   PP  +Y
Sbjct: 479 PPPPPPPPPPPPPAYSPPPPPPPPPPVYSPPPPPPVY 515

[Close]
BLAST of Cla011701 vs. NCBI nr
Match: gi|685289915|ref|XP_009135898.1| (PREDICTED: leucine-rich repeat extensin-like protein 4 [Brassica rapa])

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-06
Identity = 23/37 (62.16%), Postives = 25/37 (67.57%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLY 95
           PPPPPPPP  PPP Y PPPPPPP   +Y   PP  +Y
Sbjct: 632 PPPPPPPPPPPPPVYSPPPPPPPPPPVYSPPPPPPVY 668


HSP 2 Score: 58.9 bits (141), Expect = 7.3e-06
Identity = 25/42 (59.52%), Postives = 28/42 (66.67%), Query Frame = 1 

Query: 53  PCTNYPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLY 95
           P  + PPPPPPPP  PPPAY PPPPPPP   +Y   PP  +Y
Sbjct: 475 PVYSPPPPPPPPP-PPPPAYSPPPPPPPPPPVYSPPPPPPVY 515


HSP 3 Score: 57.4 bits (137), Expect = 2.1e-05
Identity = 24/42 (57.14%), Postives = 27/42 (64.29%), Query Frame = 1 

Query: 53  PCTNYPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLY 95
           P  + PPPPPPPP  PPP Y PPPPPPP   +Y   PP  +Y
Sbjct: 628 PVYSPPPPPPPPP-PPPPVYSPPPPPPPPPPVYSPPPPPPVY 668


HSP 4 Score: 54.7 bits (130), Expect = 1.4e-04
Identity = 19/23 (82.61%), Postives = 19/23 (82.61%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPP 81
           PPPPPPPP  PPP Y PPPPPPP
Sbjct: 463 PPPPPPPPPPPPPVYSPPPPPPP 485


HSP 5 Score: 54.7 bits (130), Expect = 1.4e-04
Identity = 19/23 (82.61%), Postives = 19/23 (82.61%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPP 81
           PPPPPPPP  PPP Y PPPPPPP
Sbjct: 616 PPPPPPPPPPPPPVYSPPPPPPP 638


HSP 6 Score: 54.3 bits (129), Expect = 1.8e-04
Identity = 19/24 (79.17%), Postives = 19/24 (79.17%), Query Frame = 1 

Query: 57  YPPPPPPPPKKPPPAYCPPPPPPP 81
           Y PPPPPPP  PPP Y PPPPPPP
Sbjct: 439 YSPPPPPPPPPPPPVYSPPPPPPP 462


HSP 7 Score: 54.3 bits (129), Expect = 1.8e-04
Identity = 19/24 (79.17%), Postives = 19/24 (79.17%), Query Frame = 1 

Query: 57  YPPPPPPPPKKPPPAYCPPPPPPP 81
           Y PPPPPPP  PPP Y PPPPPPP
Sbjct: 592 YSPPPPPPPPPPPPVYSPPPPPPP 615


HSP 8 Score: 53.9 bits (128), Expect = 2.4e-04
Identity = 24/48 (50.00%), Postives = 26/48 (54.17%), Query Frame = 1 

Query: 58  PP-----------PPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLY 95
           PP           PPPPPP  PPPAY PPPPPPP   +Y   PP  +Y
Sbjct: 468 PPPPPPPPVYSPPPPPPPPPPPPPAYSPPPPPPPPPPVYSPPPPPPVY 515


HSP 9 Score: 52.4 bits (124), Expect = 6.9e-04
Identity = 23/48 (47.92%), Postives = 25/48 (52.08%), Query Frame = 1 

Query: 58  PP-----------PPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLY 95
           PP           PPPPPP  PPP Y PPPPPPP   +Y   PP  +Y
Sbjct: 621 PPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPPPPPPPVYSPPPPPPVY 668


HSP 10 Score: 51.2 bits (121), Expect = 1.5e-03
Identity = 20/28 (71.43%), Postives = 21/28 (75.00%), Query Frame = 1 

Query: 53  PCTNYPPPPPPPPKKPPPAYCPPPPPPP 81
           P  + PPPPPPPP  PPP Y PPPPPPP
Sbjct: 437 PVYSPPPPPPPPP--PPPVYSPPPPPPP 462


HSP 11 Score: 51.2 bits (121), Expect = 1.5e-03
Identity = 20/28 (71.43%), Postives = 21/28 (75.00%), Query Frame = 1 

Query: 53  PCTNYPPPPPPPPKKPPPAYCPPPPPPP 81
           P  + PPPPPPPP  PPP Y PPPPPPP
Sbjct: 590 PVYSPPPPPPPPP--PPPVYSPPPPPPP 615


HSP 12 Score: 50.8 bits (120), Expect = 2.0e-03
Identity = 21/42 (50.00%), Postives = 24/42 (57.14%), Query Frame = 1 

Query: 53  PCTNYPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLY 95
           P   +PPPPPP P  P P Y PPPPPP    +Y   PP  +Y
Sbjct: 555 PPPQFPPPPPPSPPPPSPVYSPPPPPP----VYSPPPPPPVY 592


HSP 13 Score: 48.5 bits (114), Expect = 9.9e-03
Identity = 21/37 (56.76%), Postives = 22/37 (59.46%), Query Frame = 1 

Query: 58  PPPPPP----PPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           PPPPPP    PP  PPP   PPPPPPP   +Y   PP
Sbjct: 599 PPPPPPPVYSPPPPPPPPPPPPPPPPPPPPVYSPPPP 635


HSP 14 Score: 48.5 bits (114), Expect = 9.9e-03
Identity = 21/37 (56.76%), Postives = 22/37 (59.46%), Query Frame = 1 

Query: 58  PPPPPP----PPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           PPPPPP    PP  PPP   PPPPPPP   +Y   PP
Sbjct: 446 PPPPPPPVYSPPPPPPPPPPPPPPPPPPPPVYSPPPP 482


HSP 15 Score: 48.5 bits (114), Expect = 9.9e-03
Identity = 20/37 (54.05%), Postives = 22/37 (59.46%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLY 95
           PPPPPP P  P P Y PPPPPP    +Y   PP  +Y
Sbjct: 407 PPPPPPSPPPPSPVYSPPPPPP----VYSPPPPPPVY 439


HSP 16 Score: 48.5 bits (114), Expect = 9.9e-03
Identity = 24/62 (38.71%), Postives = 26/62 (41.94%), Query Frame = 1 

Query: 57  YPPPP------------------------PPPPKKPPPAYCPPPPPPPSSFIYMLGPPGN 95
           Y PPP                        PPPP  PPPAY PPPPPPP   +Y   PP  
Sbjct: 454 YSPPPPPPPPPPPPPPPPPPPPVYSPPPPPPPPPPPPPAYSPPPPPPPPPPVYSPPPPPP 513


HSP 17 Score: 47.8 bits (112), Expect = 1.7e-02
Identity = 23/49 (46.94%), Postives = 25/49 (51.02%), Query Frame = 1 

Query: 47  PSVKCTPCTNYPPPPPPPPKKPPPAYC-PPPPPPPSSFIYMLGPPGNLY 95
           P V   P    PPPP   P  PPP Y  PPPPPPP   +Y   PP  +Y
Sbjct: 643 PPVYSPPPPPPPPPPVYSPPPPPPVYSPPPPPPPPPPPVYSSPPPPPVY 691


HSP 18 Score: 47.0 bits (110), Expect = 2.9e-02
Identity = 21/39 (53.85%), Postives = 22/39 (56.41%), Query Frame = 1 

Query: 57  YPPPPPPPPKKPPPAYCPPPP-----PPPSSFIYMLGPP 91
           Y PPPPPPP  PP    PPPP     PPP + IY   PP
Sbjct: 515 YSPPPPPPPPPPPVYSSPPPPPVYSSPPPPAPIYCTRPP 553


HSP 19 Score: 47.0 bits (110), Expect = 2.9e-02
Identity = 21/39 (53.85%), Postives = 22/39 (56.41%), Query Frame = 1 

Query: 57  YPPPPPPPPKKPPPAYCPPPP-----PPPSSFIYMLGPP 91
           Y PPPPPPP  PP    PPPP     PPP + IY   PP
Sbjct: 668 YSPPPPPPPPPPPVYSSPPPPPVYSSPPPPAPIYCTRPP 706


HSP 20 Score: 46.2 bits (108), Expect = 4.9e-02
Identity = 20/38 (52.63%), Postives = 22/38 (57.89%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYC-PPPPPPPSSFIYMLGPPGNLY 95
           PPPP   P  PPP Y  PPPPPPP   +Y   PP  +Y
Sbjct: 501 PPPPVYSPPPPPPVYSPPPPPPPPPPPVYSSPPPPPVY 538


HSP 21 Score: 45.4 bits (106), Expect = 8.4e-02
Identity = 21/40 (52.50%), Postives = 22/40 (55.00%), Query Frame = 1 

Query: 54  CTNYPPPPPPPPKKPPPAYCPPPPP---PPSSFIYMLGPP 91
           CT  PPPPP P   PPP Y PPPPP    P  + Y   PP
Sbjct: 702 CTR-PPPPPCPSPPPPPHYSPPPPPHHSSPPPYYYSSPPP 740


HSP 22 Score: 45.1 bits (105), Expect = 1.1e-01
Identity = 18/33 (54.55%), Postives = 19/33 (57.58%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           PPPP   P  PPP Y PPPPPPP     +  PP
Sbjct: 425 PPPPVYSPPPPPPVYSPPPPPPPPPPPPVYSPP 457


HSP 23 Score: 45.1 bits (105), Expect = 1.1e-01
Identity = 16/22 (72.73%), Postives = 16/22 (72.73%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPP 80
           PPPPPP    PPP Y PPPPPP
Sbjct: 805 PPPPPPHSPPPPPRYSPPPPPP 826


HSP 24 Score: 45.1 bits (105), Expect = 1.1e-01
Identity = 18/33 (54.55%), Postives = 19/33 (57.58%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           PPPP   P  PPP Y PPPPPPP     +  PP
Sbjct: 578 PPPPVYSPPPPPPVYSPPPPPPPPPPPPVYSPP 610


HSP 25 Score: 44.3 bits (103), Expect = 1.9e-01
Identity = 22/49 (44.90%), Postives = 25/49 (51.02%), Query Frame = 1 

Query: 53  PCTNYPPPPPPPPKKPPPAY--CPPPPPP----PSSFIYMLGPPGNLYP 96
           P  +Y PPPPP    PPP Y   PPPPPP    P  + Y   PP +  P
Sbjct: 715 PPPHYSPPPPPHHSSPPPYYYSSPPPPPPHHSSPPPYYYNSPPPPHHSP 763


HSP 26 Score: 41.6 bits (96), Expect = 1.2e+00
Identity = 23/52 (44.23%), Postives = 24/52 (46.15%), Query Frame = 1 

Query: 58  PP----PPPPPP----KKPPPAYCPPPP-------PPPSSFIYMLGPPGNLY 95
           PP    PPPPPP      PPP Y  PPP       PPP S  Y   PP  +Y
Sbjct: 824 PPPCIEPPPPPPCIEYSPPPPVYSSPPPPSVHYSSPPPPSVHYSSPPPPTVY 875


HSP 27 Score: 41.2 bits (95), Expect = 1.6e+00
Identity = 19/38 (50.00%), Postives = 21/38 (55.26%), Query Frame = 1 

Query: 53  PCTNYPPPPP----PPPK------KPPPAYCPPPPPPP 81
           P  + PPPPP    PPP       +PPP  CP PPPPP
Sbjct: 680 PVYSSPPPPPVYSSPPPPAPIYCTRPPPPPCPSPPPPP 717


HSP 28 Score: 40.8 bits (94), Expect = 2.1e+00
Identity = 18/37 (48.65%), Postives = 19/37 (51.35%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPP----PPSSFIYMLGPP 91
           PPPPPP    PPP Y   PPP    PP  + Y   PP
Sbjct: 738 PPPPPPHHSSPPPYYYNSPPPPHHSPPPPYYYNSPPP 774


HSP 29 Score: 39.7 bits (91), Expect = 4.6e+00
Identity = 18/42 (42.86%), Postives = 22/42 (52.38%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPP-----PSSFIYMLGPPGNLY 95
           PPPP   P  PPP   PPPPPP     P   +Y   PP +++
Sbjct: 814 PPPPRYSPPPPPPCIEPPPPPPCIEYSPPPPVYSSPPPPSVH 855


HSP 30 Score: 60.1 bits (144), Expect = 3.3e-06
Identity = 31/64 (48.44%), Postives = 35/64 (54.69%), Query Frame = 1 

Query: 35  SKKLDESAGGSDPSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLY 94
           S  +D SA G        P   YPPPPPPPP  PPP Y PPPPPPP   +Y   PP +  
Sbjct: 357 SHPVDCSAFGCQARRSPPPPVKYPPPPPPPP--PPPLYSPPPPPPP--LVYPSPPPPSPP 416

Query: 95  PIDQ 99
           P +Q
Sbjct: 417 PPEQ 416

[Close]
BLAST of Cla011701 vs. NCBI nr
Match: gi|661897385|emb|CDO99097.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 46.2 bits (108), Expect = 4.9e-02
Identity = 19/39 (48.72%), Postives = 21/39 (53.85%), Query Frame = 1 

Query: 47  PSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPPSSFIY 86
           P     P     PPPPPPP +PP A  PPPPPP   + Y
Sbjct: 406 PPPPSPPPPEQHPPPPPPPSQPPEACTPPPPPPVYYYHY 444


HSP 2 Score: 44.7 bits (104), Expect = 1.4e-01
Identity = 20/34 (58.82%), Postives = 20/34 (58.82%), Query Frame = 1 

Query: 57  YPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           YP PPPP P  PPP   PPPPPPPS       PP
Sbjct: 403 YPSPPPPSP--PPPEQHPPPPPPPSQPPEACTPP 434


HSP 3 Score: 40.0 bits (92), Expect = 3.5e+00
Identity = 20/47 (42.55%), Postives = 20/47 (42.55%), Query Frame = 1 

Query: 58  PP--------------PPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           PP              P PPPP  PPP   PPPPPPPS       PP
Sbjct: 388 PPPLYSPPPPPPPLVYPSPPPPSPPPPEQHPPPPPPPSQPPEACTPP 434


HSP 4 Score: 59.7 bits (143), Expect = 4.3e-06
Identity = 22/33 (66.67%), Postives = 23/33 (69.70%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           PPPPPPPP  PPP Y PPPPPPP   +Y   PP
Sbjct: 460 PPPPPPPPSPPPPVYSPPPPPPPPPPVYSPPPP 492

[Close]
BLAST of Cla011701 vs. NCBI nr
Match: gi|727416090|ref|XP_010513507.1| (PREDICTED: leucine-rich repeat extensin-like protein 4 [Camelina sativa])

HSP 1 Score: 52.4 bits (124), Expect = 6.9e-04
Identity = 24/44 (54.55%), Postives = 25/44 (56.82%), Query Frame = 1 

Query: 47  PSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           P     P   Y PPPPPPP  PPP Y PPPPPPP   +Y   PP
Sbjct: 464 PPPPSPPPPVYSPPPPPPP--PPPVYSPPPPPPP---VYSSPPP 502


HSP 2 Score: 51.2 bits (121), Expect = 1.5e-03
Identity = 22/44 (50.00%), Postives = 23/44 (52.27%), Query Frame = 1 

Query: 58  PP-----------PPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           PP           PPPPPP  PPP Y PPPPPPP   +Y   PP
Sbjct: 449 PPPVYSPPPPPPPPPPPPPSPPPPVYSPPPPPPPPPPVYSPPPP 492


HSP 3 Score: 50.4 bits (119), Expect = 2.6e-03
Identity = 19/23 (82.61%), Postives = 19/23 (82.61%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPP 81
           PPPPPPPP  PPP Y PPPPPPP
Sbjct: 441 PPPPPPPP--PPPVYSPPPPPPP 461


HSP 4 Score: 44.3 bits (103), Expect = 1.9e-01
Identity = 21/49 (42.86%), Postives = 23/49 (46.94%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPP-----------PPSSFIYMLGPPGNLYP 96
           PPPPP P   PPP Y PPPPP           PP  + Y   PP +  P
Sbjct: 511 PPPPPCPLPPPPPHYSPPPPPHYSSPPPPHHSPPPPYYYSSPPPPHHSP 559


HSP 5 Score: 42.4 bits (98), Expect = 7.1e-01
Identity = 21/49 (42.86%), Postives = 22/49 (44.90%), Query Frame = 1 

Query: 45  SDPSVKCTPCTNYPPPPPPPPK-------------KPPPAYCPPPPPPP 81
           S P     P   Y PPPPPPP              +PPP  CP PPPPP
Sbjct: 475 SPPPPPPPPPPVYSPPPPPPPVYSSPPPPAPIYCVRPPPPPCPLPPPPP 523


HSP 6 Score: 41.6 bits (96), Expect = 1.2e+00
Identity = 18/33 (54.55%), Postives = 19/33 (57.58%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           PPP   PP  PPP Y  PPPP P   IY + PP
Sbjct: 483 PPPVYSPPPPPPPVYSSPPPPAP---IYCVRPP 512


HSP 7 Score: 37.7 bits (86), Expect = 1.7e+01
Identity = 17/37 (45.95%), Postives = 19/37 (51.35%), Query Frame = 1 

Query: 58  PPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPPGNLY 95
           PPPP   P  PPP  C  PPPPP    Y   PP  ++
Sbjct: 610 PPPPHYSPPPPPP--CIEPPPPPPCIEYSHPPPPTVH 644


HSP 8 Score: 59.3 bits (142), Expect = 5.6e-06
Identity = 25/44 (56.82%), Postives = 28/44 (63.64%), Query Frame = 1 

Query: 47  PSVKCTPCTNYPPPPPPPPKKPPPAYCPPPPPPPSSFIYMLGPP 91
           PS    P  +YPPPPPPPP  PPP   PPPPPPP   +Y+  PP
Sbjct: 73  PSPPSPPSYSYPPPPPPPPPPPPPPPPPPPPPPPPPPVYL--PP 114

The following BLAST results are available for this feature:
BLAST of Cla011701 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LRX6_ARATH6.0e-0847.37Leucine-rich repeat extensin-like protein 6 OS=Arabidopsis thaliana GN=LRX6 PE=2... [more]
LRX3_ARATH6.6e-0761.11Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana GN=LRX3 PE=1... [more]
ZFHX4_HUMAN1.9e-0647.17Zinc finger homeobox protein 4 OS=Homo sapiens GN=ZFHX4 PE=1 SV=1[more]
ALG13_HUMAN1.9e-0657.89Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG... [more]
PRR12_MOUSE3.3e-0657.14Proline-rich protein 12 OS=Mus musculus GN=Prr12 PE=1 SV=1[more]
BLAST of Cla011701 vs. TrEMBL
Match NameE-valueIdentityDescription
U5G8W7_POPTR3.9e-0656.00Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s02110g PE=4 SV=1[more]
U5G8W7_POPTR2.8e-0450.00Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s02110g PE=4 SV=1[more]
A0A163GJS0_DIDRA7.4e-0540.28Uncharacterized protein OS=Didymella rabiei GN=ST47_g3963 PE=4 SV=1[more]
V6F0M2_9PROT2.1e-0453.66Uncharacterized protein OS=Magnetospirillum gryphiswaldense MSR-1 v2 GN=MGMSRv2_... [more]
A0A0L7QNN2_9HYME4.8e-0460.61Uncharacterized protein (Fragment) OS=Habropoda laboriosa GN=WH47_09120 PE=4 SV=... [more]
BLAST of Cla011701 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|702274828|ref|XP_010044175.1|9.9e-1943.38PREDICTED: leucine-rich repeat extensin-like protein 2 [Eucalyptus grandis][more]
gi|685289915|ref|XP_009135898.1|6.6e-0764.86PREDICTED: leucine-rich repeat extensin-like protein 4 [Brassica rapa][more]
gi|685289915|ref|XP_009135898.1|1.9e-0662.16PREDICTED: leucine-rich repeat extensin-like protein 4 [Brassica rapa][more]
gi|661897385|emb|CDO99097.1|4.9e-0248.72unnamed protein product [Coffea canephora][more]
gi|727416090|ref|XP_010513507.1|6.9e-0454.55PREDICTED: leucine-rich repeat extensin-like protein 4 [Camelina sativa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU58160watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla011701Cla011701.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU58160WMU58160transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35094FAMILY NOT NAMEDcoord: 12..127
score: 7.3
NoneNo IPR availablePANTHERPTHR35094:SF1SUBFAMILY NOT NAMEDcoord: 12..127
score: 7.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla011701Cla97C07G134180Watermelon (97103) v2wmwmbB170
Cla011701ClCG07G006160Watermelon (Charleston Gray)wcgwmB368
Cla011701CmoCh04G010810Cucurbita moschata (Rifu)cmowmB689
Cla011701Lsi04G011330Bottle gourd (USVL1VR-Ls)lsiwmB303
Cla011701Cp4.1LG01g07630Cucurbita pepo (Zucchini)cpewmB423
Cla011701Carg00115Silver-seed gourdcarwmB0668
Cla011701Bhi07G000289Wax gourdwgowmB549
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla011701Silver-seed gourdcarwmB0168
Cla011701Cucurbita maxima (Rimu)cmawmB695
Cla011701Cucurbita maxima (Rimu)cmawmB697
Cla011701Cucurbita moschata (Rifu)cmowmB691
Cla011701Cucurbita pepo (Zucchini)cpewmB425