Cla002443 (gene) Watermelon (97103) v1

Overview
NameCla002443
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionWD repeat protein 18 (AHRD V1 **-- B0WSI0_CULQU); contains Interpro domain(s) IPR017986 WD40 repeat, region
LocationChr7 : 23738506 .. 23739834 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTATGCCATCTTCTCCACAAGAAGTTGTCCTTGCCAGCTCTCCTGATGGCCCCATTGTTGCGTATGATGCCTCCACAGGCAGCCCTCTAGCCAGCTTCAACAGTAGCCGTTCACCTCGCCGTGGCATCACCCGAGCGGGGAAAAGTTTCATAGCCGTCTCGCACATCTGCCCGGTCACTGCATCGGGTTCAATCCACATTTACAATTGGTGGACTTCATCTGCCTTTCAAAGCCTCGCTGTCCCTGAACCTGTTGCCCCTCTCACAGCCACTCCTGATGGTTTTTATCTGTTTGCTGGTGGCCTTTCAGGCTACATCCATACTCTCTCTCTTCCATCAGGGGATGTTCTCAACTCTCTCCCAGCACACAAAAAACCAGTCTCTTGCCTTAAACTTAGTGCTGATGGGTCACTTCTCATTTCAGGTGGGGATGATGGCACAATTGTTGTCATCCCAATCTTTCAACTTGTACAAGCCAAACCACGAGAAAGTGAAACCAAACACATTCTGCATCAGTTTTTAGCACATACTGATTCAGTGACTTCCATTTACTCTGGCATGGGCACGTCCAGTTCCCAAATAGTCTCCTGCTCATTGGATGGCAGATGCAAATTCTGGAGCTTACTCTCAGAAACAGTCTTGCACACCGTAGTGTTCCCTTGTGCGATTTTCAGTGTGGTTTTAGACCCAACAGAGACAGAGTTTTTCGCTGCAGGATCTGATGGGTTGGTGTACAAGGGCTCGTTGAGACATAACAACAAACATCTTGTGGGCACAGAATATGAACTAATTCCACCAGTCTCCAACGACTTGGTGTACAAGCGTTCATTGAGGCATAAAAGCAAACACCATATGGGCACAAGCTCTGAACTAATTCCATGGTCGCCAAAGCACGACGCTGCAGTTGTTTCTATAGTCATAGTCAACGAAGGAAAGCACTTAATATCTGCAGCAGAAGATGGGAGCATCTGGGTCTGGGAAGTAAAGAAAGGGGAGGTCATAATGGCCCTCGAAAATGAGATAGGAAGCATAAGTGATTTGGTGATGGCCACAGAAAAAGGCCTTGGAAAAGAACAGAGTGTGAGAACAGGCAGCCATGGAAGAGCAATGGAAATTAGTGAGAGGTTTAGATTACCCATTAAGATGTTGGAGTTGTCAATAAACCAAAGAGTTGATATGCAAGGCGCGGTGGCGGCGGCCGGAAGCGACGTGAGGAGAGCCATTGAGATGCTGGAATCTGCCATTGCTGTGTATGAGAAGATGTTGGAATTAATCCTCAAGGAAGCCAAAGCAAGCTACAATCAAAGAGAAGAAACACGAGGATAG

mRNA sequence

ATGACTATGCCATCTTCTCCACAAGAAGTTGTCCTTGCCAGCTCTCCTGATGGCCCCATTGTTGCGTATGATGCCTCCACAGGCAGCCCTCTAGCCAGCTTCAACAGTAGCCGTTCACCTCGCCGTGGCATCACCCGAGCGGGGAAAAGTTTCATAGCCGTCTCGCACATCTGCCCGGTCACTGCATCGGGTTCAATCCACATTTACAATTGGTGGACTTCATCTGCCTTTCAAAGCCTCGCTGTCCCTGAACCTGTTGCCCCTCTCACAGCCACTCCTGATGGTTTTTATCTGTTTGCTGGTGGCCTTTCAGGCTACATCCATACTCTCTCTCTTCCATCAGGGGATGTTCTCAACTCTCTCCCAGCACACAAAAAACCAGTCTCTTGCCTTAAACTTAGTGCTGATGGGTCACTTCTCATTTCAGGTGGGGATGATGGCACAATTGTTGTCATCCCAATCTTTCAACTTGTACAAGCCAAACCACGAGAAAGTGAAACCAAACACATTCTGCATCAGTTTTTAGCACATACTGATTCAGTGACTTCCATTTACTCTGGCATGGGCACGTCCAGTTCCCAAATAGTCTCCTGCTCATTGGATGGCAGATGCAAATTCTGGAGCTTACTCTCAGAAACAGTCTTGCACACCGTAGTGTTCCCTTGTGCGATTTTCAGTGTGGTTTTAGACCCAACAGAGACAGAGTTTTTCGCTGCAGGATCTGATGGGTTGGTGTACAAGGGCTCGTTGAGACATAACAACAAACATCTTGTGGGCACAGAATATGAACTAATTCCACCAGTCTCCAACGACTTGGTGTACAAGCGTTCATTGAGGCATAAAAGCAAACACCATATGGGCACAAGCTCTGAACTAATTCCATGGTCGCCAAAGCACGACGCTGCAGTTGTTTCTATAGTCATAGTCAACGAAGGAAAGCACTTAATATCTGCAGCAGAAGATGGGAGCATCTGGGTCTGGGAAGTAAAGAAAGGGGAGGTCATAATGGCCCTCGAAAATGAGATAGGAAGCATAAGTGATTTGGTGATGGCCACAGAAAAAGGCCTTGGAAAAGAACAGAGTGTGAGAACAGGCAGCCATGGAAGAGCAATGGAAATTAGTGAGAGGTTTAGATTACCCATTAAGATGTTGGAGTTGTCAATAAACCAAAGAGTTGATATGCAAGGCGCGGTGGCGGCGGCCGGAAGCGACGTGAGGAGAGCCATTGAGATGCTGGAATCTGCCATTGCTGTGTATGAGAAGATGTTGGAATTAATCCTCAAGGAAGCCAAAGCAAGCTACAATCAAAGAGAAGAAACACGAGGATAG

Coding sequence (CDS)

ATGACTATGCCATCTTCTCCACAAGAAGTTGTCCTTGCCAGCTCTCCTGATGGCCCCATTGTTGCGTATGATGCCTCCACAGGCAGCCCTCTAGCCAGCTTCAACAGTAGCCGTTCACCTCGCCGTGGCATCACCCGAGCGGGGAAAAGTTTCATAGCCGTCTCGCACATCTGCCCGGTCACTGCATCGGGTTCAATCCACATTTACAATTGGTGGACTTCATCTGCCTTTCAAAGCCTCGCTGTCCCTGAACCTGTTGCCCCTCTCACAGCCACTCCTGATGGTTTTTATCTGTTTGCTGGTGGCCTTTCAGGCTACATCCATACTCTCTCTCTTCCATCAGGGGATGTTCTCAACTCTCTCCCAGCACACAAAAAACCAGTCTCTTGCCTTAAACTTAGTGCTGATGGGTCACTTCTCATTTCAGGTGGGGATGATGGCACAATTGTTGTCATCCCAATCTTTCAACTTGTACAAGCCAAACCACGAGAAAGTGAAACCAAACACATTCTGCATCAGTTTTTAGCACATACTGATTCAGTGACTTCCATTTACTCTGGCATGGGCACGTCCAGTTCCCAAATAGTCTCCTGCTCATTGGATGGCAGATGCAAATTCTGGAGCTTACTCTCAGAAACAGTCTTGCACACCGTAGTGTTCCCTTGTGCGATTTTCAGTGTGGTTTTAGACCCAACAGAGACAGAGTTTTTCGCTGCAGGATCTGATGGGTTGGTGTACAAGGGCTCGTTGAGACATAACAACAAACATCTTGTGGGCACAGAATATGAACTAATTCCACCAGTCTCCAACGACTTGGTGTACAAGCGTTCATTGAGGCATAAAAGCAAACACCATATGGGCACAAGCTCTGAACTAATTCCATGGTCGCCAAAGCACGACGCTGCAGTTGTTTCTATAGTCATAGTCAACGAAGGAAAGCACTTAATATCTGCAGCAGAAGATGGGAGCATCTGGGTCTGGGAAGTAAAGAAAGGGGAGGTCATAATGGCCCTCGAAAATGAGATAGGAAGCATAAGTGATTTGGTGATGGCCACAGAAAAAGGCCTTGGAAAAGAACAGAGTGTGAGAACAGGCAGCCATGGAAGAGCAATGGAAATTAGTGAGAGGTTTAGATTACCCATTAAGATGTTGGAGTTGTCAATAAACCAAAGAGTTGATATGCAAGGCGCGGTGGCGGCGGCCGGAAGCGACGTGAGGAGAGCCATTGAGATGCTGGAATCTGCCATTGCTGTGTATGAGAAGATGTTGGAATTAATCCTCAAGGAAGCCAAAGCAAGCTACAATCAAAGAGAAGAAACACGAGGATAG

Protein sequence

MTMPSSPQEVVLASSPDGPIVAYDASTGSPLASFNSSRSPRRGITRAGKSFIAVSHICPVTASGSIHIYNWWTSSAFQSLAVPEPVAPLTATPDGFYLFAGGLSGYIHTLSLPSGDVLNSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPRESETKHILHQFLAHTDSVTSIYSGMGTSSSQIVSCSLDGRCKFWSLLSETVLHTVVFPCAIFSVVLDPTETEFFAAGSDGLVYKGSLRHNNKHLVGTEYELIPPVSNDLVYKRSLRHKSKHHMGTSSELIPWSPKHDAAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGEVIMALENEIGSISDLVMATEKGLGKEQSVRTGSHGRAMEISERFRLPIKMLELSINQRVDMQGAVAAAGSDVRRAIEMLESAIAVYEKMLELILKEAKASYNQREETRG
Homology
[Close]
BLAST of Cla002443 vs. Swiss-Prot
Match: RID3_ARATH (Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana GN=RID3 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 5.8e-34
Identity = 84/247 (34.01%), Postives = 122/247 (49.39%), Query Frame = 1 

Query: 10  VVLASSPDGPIVAYDASTGSPLASFNSSRSPRRGITRAGKSFIAVSHICPVTASGSIHIY 69
           V+ +SS D  I ++D  TG+    F    SP  G+T  G+ F+A S +     SGSI  +
Sbjct: 5   VIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNTSGSIFYW 64

Query: 70  NWWTSSAFQSLAVPEPVAPLTATPDGFYLFAGGLSGYIHTLSLPSGDVLNSLPAHKKPVS 129
           +W    A       EP+  L A  +G YL  GG+SG I+   + +G +L     H + V+
Sbjct: 65  SWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVT 124

Query: 130 CLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPRESETKHILHQFLAHTDSVTSIYSGMG 189
           CL  S D SLL+SG  DG+I V  + +L     R+       H F  HT SVT I    G
Sbjct: 125 CLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYG 184

Query: 190 TSSSQIVSCSLDGRCKFWSLLSETVLHTVVFPCAIFSVVLDPTETEFFAAGSDGLVYKGS 249
             ++ I+S S D  CK WSL    +L  ++FP  I ++ LDP    F+A   D  +Y G+
Sbjct: 185 GCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIYIGA 244

Query: 250 LRHNNKH 257
           +   +++
Sbjct: 245 INATSEY 251


HSP 2 Score: 43.9 bits (102), Expect = 5.3e-03
Identity = 26/79 (32.91%), Postives = 36/79 (45.57%), Query Frame = 1 

Query: 78  QSLAVPEPVAPLTATPDGFYLFAGGLS-----GYIHTLSLPSGDVLNSLPAHKKPVSCLK 137
           +++  P  +  L   P G   +AG        G I+  S     VL S+    K ++CL 
Sbjct: 211 KNIIFPSVINALALDPGGCVFYAGARDSKIYIGAINATSEYGTQVLGSVSEKGKAITCLA 270

Query: 138 LSADGSLLISGGDDGTIVV 152
             ADG+LLISG +DG + V
Sbjct: 271 YCADGNLLISGSEDGVVCV 289

[Close]
BLAST of Cla002443 vs. Swiss-Prot
Match: WDR18_DANRE (WD repeat-containing protein 18 OS=Danio rerio GN=wdr18 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.2e-23
Identity = 90/343 (26.24%), Postives = 152/343 (44.31%), Query Frame = 1 

Query: 5   SSPQEVVLASSPDGPI---VAYDASTGSPLASFNSSRSPRRGITRAGKSFIAVSHICPVT 64
           S+P EVVL++   G +     YD  TGS   S+    +  R +T     +I  + +    
Sbjct: 2   SAPVEVVLSADSAGQLFNCAVYDPHTGSEFLSYRGGNTSSRSLTILNGEYILGAQL---- 61

Query: 65  ASGSIHIYNWWTS---SAFQSLAVPEPVAPLTATPDGFYLFAGGLSGYIHTLSLPSGDVL 124
             G  +I  W         Q +  P  V  L A+PDG Y+ AG ++  I+   + +G++L
Sbjct: 62  --GKNYINVWEIQRKDQLQQKIVCPGIVTCLCASPDGLYVLAG-IAEAIYLWEVSTGNLL 121

Query: 125 NSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQA-KPRESETKHILHQFLAH 184
             L  H + +SC+K + D S  +SGG D    +  +  +VQ    R  E +HIL +   H
Sbjct: 122 AILSRHFQDLSCIKFTDDSSHFVSGGKDNLAFIWNLSSVVQLDSSRTPEPRHILSR---H 181

Query: 185 TDSVTSIYSGMGTSSSQIVSCSLDGRCKFWSLLSETVLHTVVFPCAIFSVVLDPTETEFF 244
           +  +T I+ G+    +++ + SLD   K W + S  +L +V+F   I SV  DP E   F
Sbjct: 182 SLPITDIHCGLMGPQARVATASLDQTVKVWEISSGEMLLSVLFDVGIMSVTFDPCEYFLF 241

Query: 245 AAGSDGLVYKGSLRHNNKHLVGTEYELIPPVSNDLVYKRSLRHKSKHHMGTSSELIPWSP 304
             GSDG +++ SL   +             +S D  ++            + SE      
Sbjct: 242 CGGSDGNIFQVSLCSTS-------------LSRDKTFQ------------SDSEGNQVFK 301

Query: 305 KHDAAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGEVIMALEN 341
            H   V  + +  +G  L+S + D ++ +W+V+  + I  + +
Sbjct: 302 GHRNLVTCLSVSMDGTVLLSGSNDETVRMWDVQSKQCIWTINH 309

[Close]
BLAST of Cla002443 vs. Swiss-Prot
Match: WDR18_RAT (WD repeat-containing protein 18 OS=Rattus norvegicus GN=Wdr18 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.7e-23
Identity = 84/338 (24.85%), Postives = 149/338 (44.08%), Query Frame = 1 

Query: 5   SSPQEVVLASSPDGPI---VAYDASTGSPLASFNSSRSPRRGITRAGKSFIAVSHICPVT 64
           ++P EVV+ +    P+   + ++  +G+ L ++   ++  RG+      ++  +      
Sbjct: 2   AAPMEVVVCTDSAAPLWSCMVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ----- 61

Query: 65  ASGSIHIYNWWTS---SAFQSLAVPEPVAPLTATPDGFYLFAGGLSGYIHTLSLPSGDVL 124
             G  +I  W         Q +  P PV  LT  P+G Y+ AG ++  I+   + +G++L
Sbjct: 62  -QGKNYICAWELQRKDQLQQKIMCPGPVTCLTTAPNGLYVLAG-IAESIYLWEVSTGNLL 121

Query: 125 NSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKP-RESETKHILHQFLAH 184
             L  H + VSCLK + DGS  +S G D  ++   +  ++QA P R    +H+  Q   H
Sbjct: 122 VILSRHYQDVSCLKFTGDGSHFVSAGKDCLVLAWSLCSVLQADPSRILAPRHVWSQ---H 181

Query: 185 TDSVTSIYSGMGTSSSQIVSCSLDGRCKFWSLLSETVLHTVVFPCAIFSVVLDPTETEFF 244
           T  +T ++ G G   +++ + SLD   K W++ S  +L +V+F   I SV +D  E   F
Sbjct: 182 TLPITDLHCGFGGPMARVATASLDQTMKLWAISSGDLLLSVLFDMGITSVTMDLAEHYIF 241

Query: 245 AAGSDGLVYKGSLRHNNKHLVGTEYELIPPVSNDLVYKRSLRHKSKHHMGTSSELIPWSP 304
             GSDG +++  L          E    P  +   V+K                      
Sbjct: 242 CGGSDGSIFQVDLCSRPG---PREQSFQPEQNTGKVFK---------------------- 301

Query: 305 KHDAAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGEVI 336
            H   V  + +  +G  L+S + D S+ +W+VK  + +
Sbjct: 302 GHRNQVTCLSVSTDGSILLSGSHDESVRLWDVKSKQCV 304

[Close]
BLAST of Cla002443 vs. Swiss-Prot
Match: WDR18_HUMAN (WD repeat-containing protein 18 OS=Homo sapiens GN=WDR18 PE=1 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-22
Identity = 81/337 (24.04%), Postives = 151/337 (44.81%), Query Frame = 1 

Query: 5   SSPQEVVLASSPDGPI---VAYDASTGSPLASFNSSRSPRRGITRAGKSFIAVSHICPVT 64
           ++P EV + +    P+   + ++  +G+ L ++   ++  RG+      ++  + +    
Sbjct: 2   AAPMEVAVCTDSAAPMWSCIVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQL---- 61

Query: 65  ASGSIHIYNWWTS---SAFQSLAVPEPVAPLTATPDGFYLFAGGLSGYIHTLSLPSGDVL 124
             G  +I  W         Q +  P PV  LTA+P+G Y+ AG ++  IH   + +G++L
Sbjct: 62  --GKNYISAWELQRKDQLQQKIMCPGPVTCLTASPNGLYVLAG-VAESIHLWEVSTGNLL 121

Query: 125 NSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPRESETKHILHQFLAHT 184
             L  H + VSCL+ + D S  ISGG D  ++V  +  ++QA P  S      H +  H 
Sbjct: 122 VILSRHYQDVSCLQFTGDSSHFISGGKDCLVLVWSLCSVLQADP--SRIPAPRHVWSHHA 181

Query: 185 DSVTSIYSGMGTSSSQIVSCSLDGRCKFWSLLSETVLHTVVFPCAIFSVVLDPTETEFFA 244
             +T ++ G G   +++ + SLD   K W + S  +L +V+F  +I +V +D  E   F 
Sbjct: 182 LPITDLHCGFGGPLARVATSSLDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMFC 241

Query: 245 AGSDGLVYKGSLRHNNKHLVGTEYELIPPVSNDLVYKRSLRHKSKHHMGTSSELIPWSPK 304
            GS+G +++                       DL      R +S H    + ++      
Sbjct: 242 GGSEGSIFQ----------------------VDLFTWPGQRERSFHPEQDAGKVF---KG 301

Query: 305 HDAAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGEVI 336
           H   V  + +  +G  L+S + D ++ +W+V+  + I
Sbjct: 302 HRNQVTCLSVSTDGSVLLSGSHDETVRLWDVQSKQCI 304

[Close]
BLAST of Cla002443 vs. Swiss-Prot
Match: WDR18_MOUSE (WD repeat-containing protein 18 OS=Mus musculus GN=Wdr18 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 5.1e-22
Identity = 84/338 (24.85%), Postives = 148/338 (43.79%), Query Frame = 1 

Query: 5   SSPQEVVLASSPDGPI---VAYDASTGSPLASFNSSRSPRRGITRAGKSFIAVSHICPVT 64
           ++P EVV+ +     +   V ++  +G+ L ++   ++  RG+      ++  +      
Sbjct: 2   AAPMEVVVCTDAAAQLWSCVVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQ----- 61

Query: 65  ASGSIHIYNWWTS---SAFQSLAVPEPVAPLTATPDGFYLFAGGLSGYIHTLSLPSGDVL 124
             G  +I  W         Q +  P PV  LT  P+G Y+ AG ++  I+   + +G++L
Sbjct: 62  -QGKNYICAWELQRKDQLQQKIMCPGPVTCLTTAPNGLYVLAG-IAESIYLWEVCTGNLL 121

Query: 125 NSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKP-RESETKHILHQFLAH 184
             L  H + VSCLK + DGS  +S G D   +   +  ++QA P R    +H+  Q   H
Sbjct: 122 VILSRHYQDVSCLKFTGDGSHFVSAGKDCLALAWSLCSVLQADPSRILAPRHVWSQ---H 181

Query: 185 TDSVTSIYSGMGTSSSQIVSCSLDGRCKFWSLLSETVLHTVVFPCAIFSVVLDPTETEFF 244
           T  +T ++ G G   +++ + SLD   K W++ S  +L +V+F   I SV +D  E   F
Sbjct: 182 TLPITDLHCGFGGPMARVATASLDQTVKLWAISSGDLLLSVLFDMGITSVTMDLAEHHIF 241

Query: 245 AAGSDGLVYKGSLRHNNKHLVGTEYELIPPVSNDLVYKRSLRHKSKHHMGTSSELIPWSP 304
             GSDG +++                       DL     LR  S      + ++     
Sbjct: 242 CGGSDGSIFQ----------------------VDLCSWPGLREHSFQPEQNTGKVF---K 301

Query: 305 KHDAAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGEVI 336
            H   V  + +  +G  L+S + D S+ +W+VK  + +
Sbjct: 302 GHRNQVTCLSVSTDGSVLLSGSHDESVRLWDVKSKQCL 304

[Close]
BLAST of Cla002443 vs. TrEMBL
Match: A0A0A0L0D5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083560 PE=4 SV=1)

HSP 1 Score: 781.6 bits (2017), Expect = 5.2e-223
Identity = 395/442 (89.37%), Postives = 415/442 (93.89%), Query Frame = 1 

Query: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGSPLASFNSSRSPRRGITRAGKSFIAVSHICPV 60
           MTMPSSPQEVVLASSPDGPIVAYDASTG+ LASFNSSRSPRRGITRAGKSFIAVSHICPV
Sbjct: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGTHLASFNSSRSPRRGITRAGKSFIAVSHICPV 60

Query: 61  TASGSIHIYNWWTSSAFQSLAVPEPVAPLTATPDGFYLFAGGLSGYIHTLSLPSGDVLNS 120
           TASGSIHIYNWWTSSAFQ L VPEPVAPLTATPDGFYLFAGGLSGYIH LSLPSGDVLNS
Sbjct: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS 120

Query: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPRESETKHILHQFLAHTDS 180
           LPAHKKPVSCLKLSADGSLLISGGDDGTIVV+PIFQLVQAKPRE+ T+HILHQFLAHTDS
Sbjct: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180

Query: 181 VTSIYSGMGTSSSQIVSCSLDGRCKFWSLLSETVLHTVVFPCAIFSVVLDPTETEFFAAG 240
           VTSIYSGMG SS+QIVSCSLDGRCK W+LLS T+LHTVVFPCAIFSVVL+P+ETEFFAAG
Sbjct: 181 VTSIYSGMGISSTQIVSCSLDGRCKLWNLLSGTILHTVVFPCAIFSVVLEPSETEFFAAG 240

Query: 241 SDGLVYKGSLRHNNKHLVGTEYELIPPVSNDLVYKRSLRHKSKHHMGTSSELIPWSPKHD 300
           SDGLVYKGSL HNNK   GT+YELIP +SNDLVY+RSLRHK+KH  GTSSELIPWS KH+
Sbjct: 241 SDGLVYKGSLGHNNKRRRGTDYELIPQISNDLVYRRSLRHKNKHLTGTSSELIPWSTKHE 300

Query: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGEVIMALENEIGSISDLVMATEKGLGKEQ 360
           AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKG+VIMALENE+GSISDLVMATE+  GKEQ
Sbjct: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERSHGKEQ 360

Query: 361 SVRTGSHGRAMEISERFRLPIKMLELSINQRVDMQGAVAAAGSDVRRAIEMLESAIAVYE 420
            V+T SHG AMEISERFRLPIKML LSI Q V+MQG V AAGSDV RAIEMLESAIAVYE
Sbjct: 361 CVKTDSHGGAMEISERFRLPIKMLGLSIKQTVEMQGEVGAAGSDVSRAIEMLESAIAVYE 420

Query: 421 KMLELILKEAKASYNQREETRG 443
           KMLELILKEAKASYNQREET+G
Sbjct: 421 KMLELILKEAKASYNQREETQG 442

[Close]
BLAST of Cla002443 vs. TrEMBL
Match: M5WIZ4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017540mg PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 5.0e-117
Identity = 225/392 (57.40%), Postives = 274/392 (69.90%), Query Frame = 1 

Query: 3   MPSSPQEVVLASSPDGPIVAYDASTGSPLASFNSSRSPRRGITRAGKSFIAVSHICPVTA 62
           M SSP E+VL SSPDGPI+AYDAS+G+ LA F  SRSPRRG+   GKS+IA SHI P TA
Sbjct: 1   MSSSPHEIVLTSSPDGPIIAYDASSGAALAQFTGSRSPRRGLAIVGKSYIAASHISPTTA 60

Query: 63  SGSIHIYNWWTSSAFQSLAVPEPVAPLTATPDGFYLFAGGLSGYIHTLSLPSGDVLNSLP 122
           SGS+H+YNWW+S+AF +L VPEPVAPLT T DG YLFAGGLSG +H +S+PSGDVL  LP
Sbjct: 61  SGSVHLYNWWSSTAFHNLPVPEPVAPLTVTSDGLYLFAGGLSGSVHGISIPSGDVLKPLP 120

Query: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPRESETKHILHQFLAHTDSVT 182
           AH KPVSCL +S D SLLISG DDGTIVV+PIFQLV A   +S  + ILH+F AH+DSVT
Sbjct: 121 AHSKPVSCLAISDDESLLISGSDDGTIVVVPIFQLVGASGYDSVEELILHRFAAHSDSVT 180

Query: 183 SIYSGMGTSSSQIVSCSLDGRCKFWSLLSETVLHTVVFPCAIFSVVLDPTETEFFAAGSD 242
           +I SGMG  +SQI+SCSLD  CKFWSLL  T+L T+VFPC I  V L+PT+ EF+ AGSD
Sbjct: 181 AIVSGMGLCNSQIISCSLDCTCKFWSLLRGTLLRTIVFPCTISWVALNPTQPEFYVAGSD 240

Query: 243 GLVYKGSLRHNNKHLVGTEYELIPPVSNDLVYKRSLRHKSKHHMGTSSELIPWSPKHDAA 302
           G V+KGSL+  ++ LV                               SELI W+PKH  A
Sbjct: 241 GSVHKGSLKVGSRQLV----------------------------TQGSELIAWTPKHGGA 300

Query: 303 VVSIVIVNEGKHLISAAEDGSIWVWEVKKGEVIMALENEIGSISDLVMATEKGLGKEQ-- 362
           VVS+V+VN G++LISA+EDGS+WVWEV  G+VIMAL NE+GSISDLV AT     K    
Sbjct: 301 VVSMVMVNGGRNLISASEDGSVWVWEVDAGQVIMALGNEMGSISDLVAATGINCSKANDV 360

Query: 363 -SVRTGSHGRAMEISE-RFRLPIKMLELSINQ 391
             V      RA+++ E    +  ++LEL + +
Sbjct: 361 LKVAANDRNRAIDMLESAIAMYERLLELILKE 364

[Close]
BLAST of Cla002443 vs. TrEMBL
Match: W9R444_9ROSA (WD repeat-containing protein 18 OS=Morus notabilis GN=L484_017513 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 1.2e-115
Identity = 231/443 (52.14%), Postives = 300/443 (67.72%), Query Frame = 1 

Query: 3   MPSSPQEVVLASSPDGPIVAYDASTGSPLASFNSSRSPRRGITRAGKSFIAVSHICPVTA 62
           M SSP EV+L SSP+GPI+AYDAS+G+ +  F  SRSPRRG+   GK FIA SHI PVTA
Sbjct: 1   MSSSPHEVILTSSPEGPIIAYDASSGASVTCFTGSRSPRRGLALVGKIFIAASHISPVTA 60

Query: 63  SGSIHIYNWWTSSAFQSLAVPEPVAPLTATPDGFYLFAGGLSGYIHTLSLPSGDVLNSLP 122
           SGSIHIYNWW+S+AF  L VPEPVAPL  TPDG YLFAGGLSG ++ LS+PSGDVL S+ 
Sbjct: 61  SGSIHIYNWWSSTAFHKLPVPEPVAPLIGTPDGSYLFAGGLSGSVYALSVPSGDVLRSVH 120

Query: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPRESETKHILHQFLAHTDSVT 182
           AHKK VSCL++S DGSLLISG DDGTIVVIPIFQLV +   +   + I+H+  AH+ +VT
Sbjct: 121 AHKKSVSCLRISEDGSLLISGSDDGTIVVIPIFQLVGSSINQDMDQLIMHKLAAHSGAVT 180

Query: 183 SIYSGMGTSSSQIVSCSLDGRCKFWSLLSETVLHTVVFPCAIFSVVLDPTETEFFAAGSD 242
            I SG    +SQI+SCSLD  CKFWSLL  T L TVVFP  I  +VL+P+E+EF+AAGSD
Sbjct: 181 DIISGKELCNSQIISCSLDCTCKFWSLLRGTHLRTVVFPSTILGLVLNPSESEFYAAGSD 240

Query: 243 GLVYKGSLRHNNKHLVGTEYELIPPVSNDLVYKRSLRHKSKHHMGTSSELIPWSPKHDAA 302
           G VYKGS++  ++ +  ++                         G   EL+  +  H+ A
Sbjct: 241 GSVYKGSIKVGSRRIPSSK-------------------------GQDHELV-IAQNHNGA 300

Query: 303 VVSIVIVNEGKHLISAAEDGSIWVWEVKKGEVIMALENEIG-SISDLVMATEKGLGKE-- 362
           +VS+ +VN G++L+SA+EDG +++ ++  G+V++AL NE G SISDLV+AT  G GK+  
Sbjct: 301 IVSLAMVNSGRNLVSASEDGGVYIQKIDDGQVVLALGNEFGSSISDLVVATGIGCGKDIV 360

Query: 363 ---------QSVRTGSHGRAMEISERFRLPIKMLELSINQRVDMQGAVAAAGSDVRRAIE 422
                      VR G  GR + +S     P+K       +RV+M+  +A A  D  RAI+
Sbjct: 361 GSRLGSGEFDGVRIGLSGRQVMMSSS---PVK-------ERVEMEDVLALAEKDRSRAID 407

Query: 423 MLESAIAVYEKMLELILKEAKAS 434
           +LESAIA+YE++LELILKEAK +
Sbjct: 421 LLESAIAMYERLLELILKEAKGT 407

[Close]
BLAST of Cla002443 vs. TrEMBL
Match: B9T1J9_RICCO (WD-repeat protein, putative OS=Ricinus communis GN=RCOM_0216610 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 2.2e-112
Identity = 220/440 (50.00%), Postives = 284/440 (64.55%), Query Frame = 1 

Query: 3   MPSSPQEVVLASSPDGPIVAYDASTGSPLASFNSSRSPRRGITRAGKSFIAVSHICPVTA 62
           M  S  E+VL SSPDGPI AYD  +G+ LA F  SRSPR G+   GK++IA SHI   TA
Sbjct: 1   MSFSSHEIVLTSSPDGPITAYDTISGTTLARFTGSRSPRHGLAIVGKAYIAASHISSATA 60

Query: 63  SGSIHIYNWWTSSAFQSLAVPEPVAPLTATPDGFYLFAGGLSGYIHTLSLPSGDVLNSLP 122
           SGSIH+Y WW+SSA   L +PEPVAPL ATPDG YLFAGGL G ++ LS+PSG++L S P
Sbjct: 61  SGSIHLYTWWSSSALHHLPLPEPVAPLAATPDGSYLFAGGLFGNVYALSIPSGNILKSFP 120

Query: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPRESETKHILHQFLAHTDSVT 182
           AH KPVSC+ +S+D SLLISGGDDG IVV+PIFQLV+A   E+E+  ILH F AH   VT
Sbjct: 121 AHSKPVSCINISSDSSLLISGGDDGNIVVVPIFQLVEAPGSENESNLILHSFPAHDGPVT 180

Query: 183 SIYSGMGTSSSQIVSCSLDGRCKFWSLLSETVLHTVVFPCAIFSVVLDPTETEFFAAGSD 242
            I   MG     IVSCS D  CK WSLL    L TV FPC+I  + LDPTE EF+AAGS+
Sbjct: 181 GITVCMGICHPTIVSCSTDSTCKLWSLLDGRNLQTVAFPCSISGIALDPTEVEFYAAGSN 240

Query: 243 GLVYKGSLRHNNKHLVGTEYELIPPVSNDLVYKRSLRHKSKHHMGTSSELIPWSPKHDAA 302
           GL+YKGSL+                              S+  +    +LI W+ KHD A
Sbjct: 241 GLIYKGSLQAG----------------------------SRKGIAQGRKLITWTQKHDGA 300

Query: 303 VVSIVIVNEGKHLISAAEDGSIWVWEVKKGEVIMALENEIGSISDLVMATEKGLGKEQSV 362
           VVS+V++NEGK+L+SAAEDGS+++W ++ G++IM + N + +ISD+V+A  +G+   +  
Sbjct: 301 VVSVVVINEGKNLVSAAEDGSVFIWGIENGQLIMVIGNNMDNISDVVVA--RGICDGREG 360

Query: 363 RTGSHGRAMEISERFRLPIKMLELS---INQRVDMQGAVAAAGSDVRRAIEMLESAIAVY 422
                G  M       L +   EL+   I   V+++ A+A A  + R+AI+ LESAI VY
Sbjct: 361 YGNRVGNEMNEFGGRNLGLSSKELNFRPIKDTVNVENALAVAAKNSRKAIDKLESAIGVY 410

Query: 423 EKMLELILKEAKASYNQREE 440
           E++LELILKEAKA  ++  E
Sbjct: 421 ERLLELILKEAKAGTSKNGE 410

[Close]
BLAST of Cla002443 vs. TrEMBL
Match: A0A067KXT8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03563 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 2.0e-110
Identity = 220/442 (49.77%), Postives = 282/442 (63.80%), Query Frame = 1 

Query: 3   MPSSPQEVVLASSPDGPIVAYDASTGSPLASFNSSRSPRRGITRAGKSFIAVSHICPVTA 62
           M  S  E+VL SSP GPI  YD  +G+ LA F+ SRSPR G+  AGK++IA SHI   TA
Sbjct: 1   MSFSSHEIVLTSSPHGPITVYDTVSGTTLARFSGSRSPRHGLVLAGKAYIAASHISSATA 60

Query: 63  SGSIHIYNWWTSSAFQSLAVPEPVAPLTATPDGFYLFAGGLSGYIHTLSLPSGDVLNSLP 122
           SGSIH+YNWW+ +A   L VPEPVAPL +TPDG +LFAGGLSG I  LS+PSG+++ S+P
Sbjct: 61  SGSIHLYNWWSPTALHHLPVPEPVAPLASTPDGLFLFAGGLSGDIFALSIPSGNIIKSVP 120

Query: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPRESETKHILHQFLAHTDSVT 182
           AH KPVS LK+S+D SLLISGGDDG IVV+ IFQL+ A   E+ +  ILH F+AH   VT
Sbjct: 121 AHHKPVSSLKISSDSSLLISGGDDGVIVVMAIFQLLDASGNENPSDSILHSFVAHDGPVT 180

Query: 183 SIYSGMGTSSSQIVSCSLDGRCKFWSLLSETVLHTVVFPCAIFSVVLDPTETEFFAAGSD 242
           +I S    S   IVSCS D  CK WSLL    LHTV FPC I  + LD    EF+AAGSD
Sbjct: 181 AIRSCTRLSLPAIVSCSSDCTCKLWSLLEGENLHTVAFPCVILGIALDTMGAEFYAAGSD 240

Query: 243 GLVYKGSLRHNNKHLVGTEYELIPPVSNDLVYKRSLRHKSKHHMGTSSELIPWSPKHDAA 302
           GL+YKG                            S + +S+     S EL  W+ +H  A
Sbjct: 241 GLIYKG----------------------------SFKAESRKEASRSRELAIWAERHGGA 300

Query: 303 VVSIVIVNEGKHLISAAEDGSIWVWEVKKGEVIMALENEIGSISDLVMATEKGLGKEQSV 362
           VVS+V+VNEGK+L+SA EDGS+++WE+++G+VIM L N +  ISD+V+A  KG+G+ +  
Sbjct: 301 VVSVVVVNEGKNLVSAGEDGSVYIWEIERGQVIMVLGNNMEGISDVVVA--KGIGEGKGY 360

Query: 363 RTGSHGRAMEISERFRLPIKMLELS---INQRVDMQGAVAAAGSDVRRAIEMLESAIAVY 422
                   M       L +   ELS   I + +DM+  +  A +D R+AI+MLESAI VY
Sbjct: 361 YGNGINNEMNEFVGGSLGLSGKELSSRPIKEAMDMEDVLNVAANDRRKAIDMLESAIGVY 412

Query: 423 EKMLELILKEAKASYNQREETR 442
           E++LELILKEAK S ++  E R
Sbjct: 421 ERLLELILKEAKGSTSKNGEKR 412

[Close]
BLAST of Cla002443 vs. NCBI nr
Match: gi|659101671|ref|XP_008451730.1| (PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Cucumis melo])

HSP 1 Score: 783.9 bits (2023), Expect = 1.5e-223
Identity = 393/441 (89.12%), Postives = 417/441 (94.56%), Query Frame = 1 

Query: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGSPLASFNSSRSPRRGITRAGKSFIAVSHICPV 60
           MTMPSSPQEVVLASSPDGPIVAYDASTG+PLA+FNSSRSPRRGITRAGKSFIAVSHICPV
Sbjct: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV 60

Query: 61  TASGSIHIYNWWTSSAFQSLAVPEPVAPLTATPDGFYLFAGGLSGYIHTLSLPSGDVLNS 120
           TASGSIHIYNWWTSSAFQ L VPEPVAPLTATPDGFYL AGGLSGYIH LSLPSGDVLNS
Sbjct: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLLAGGLSGYIHILSLPSGDVLNS 120

Query: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPRESETKHILHQFLAHTDS 180
           LPAHKKPVSCLKLSADGSLLISGGDDGTIVV+PIFQLVQAKPRE+ T+HILHQFLAHTDS
Sbjct: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180

Query: 181 VTSIYSGMGTSSSQIVSCSLDGRCKFWSLLSETVLHTVVFPCAIFSVVLDPTETEFFAAG 240
           VTSIYSGMG SS++IVSCSLD RCKFWSLLS T+LHTVVFPCAIFSVVL+P+E EFFAAG
Sbjct: 181 VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG 240

Query: 241 SDGLVYKGSLRHNNKHLVGTEYELIPPVSNDLVYKRSLRHKSKHHMGTSSELIPWSPKHD 300
           SDGLVYKGSLRHNNKH  GT+Y+LIP +SNDLVYKRSLRHK+KH  GTSSELIPWSPKH+
Sbjct: 241 SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSSELIPWSPKHE 300

Query: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGEVIMALENEIGSISDLVMATEKGLGKEQ 360
           AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKG+VIMALENE+GSISDLVMATE+  GKEQ
Sbjct: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ 360

Query: 361 SVRTGSHGRAMEISERFRLPIKMLELSINQRVDMQGAVAAAGSDVRRAIEMLESAIAVYE 420
            VRT  HGR ++ISERFRLPIKML LSI + VDMQG +AAAGSDVRRAIEMLESAIAVYE
Sbjct: 361 CVRTDRHGREIKISERFRLPIKMLGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAVYE 420

Query: 421 KMLELILKEAKASYNQREETR 442
           KMLELILKEA+ASYNQREET+
Sbjct: 421 KMLELILKEAEASYNQREETQ 441

[Close]
BLAST of Cla002443 vs. NCBI nr
Match: gi|778697541|ref|XP_011654344.1| (PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Cucumis sativus])

HSP 1 Score: 781.6 bits (2017), Expect = 7.4e-223
Identity = 395/442 (89.37%), Postives = 415/442 (93.89%), Query Frame = 1 

Query: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGSPLASFNSSRSPRRGITRAGKSFIAVSHICPV 60
           MTMPSSPQEVVLASSPDGPIVAYDASTG+ LASFNSSRSPRRGITRAGKSFIAVSHICPV
Sbjct: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGTHLASFNSSRSPRRGITRAGKSFIAVSHICPV 60

Query: 61  TASGSIHIYNWWTSSAFQSLAVPEPVAPLTATPDGFYLFAGGLSGYIHTLSLPSGDVLNS 120
           TASGSIHIYNWWTSSAFQ L VPEPVAPLTATPDGFYLFAGGLSGYIH LSLPSGDVLNS
Sbjct: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS 120

Query: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPRESETKHILHQFLAHTDS 180
           LPAHKKPVSCLKLSADGSLLISGGDDGTIVV+PIFQLVQAKPRE+ T+HILHQFLAHTDS
Sbjct: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180

Query: 181 VTSIYSGMGTSSSQIVSCSLDGRCKFWSLLSETVLHTVVFPCAIFSVVLDPTETEFFAAG 240
           VTSIYSGMG SS+QIVSCSLDGRCK W+LLS T+LHTVVFPCAIFSVVL+P+ETEFFAAG
Sbjct: 181 VTSIYSGMGISSTQIVSCSLDGRCKLWNLLSGTILHTVVFPCAIFSVVLEPSETEFFAAG 240

Query: 241 SDGLVYKGSLRHNNKHLVGTEYELIPPVSNDLVYKRSLRHKSKHHMGTSSELIPWSPKHD 300
           SDGLVYKGSL HNNK   GT+YELIP +SNDLVY+RSLRHK+KH  GTSSELIPWS KH+
Sbjct: 241 SDGLVYKGSLGHNNKRRRGTDYELIPQISNDLVYRRSLRHKNKHLTGTSSELIPWSTKHE 300

Query: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGEVIMALENEIGSISDLVMATEKGLGKEQ 360
           AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKG+VIMALENE+GSISDLVMATE+  GKEQ
Sbjct: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERSHGKEQ 360

Query: 361 SVRTGSHGRAMEISERFRLPIKMLELSINQRVDMQGAVAAAGSDVRRAIEMLESAIAVYE 420
            V+T SHG AMEISERFRLPIKML LSI Q V+MQG V AAGSDV RAIEMLESAIAVYE
Sbjct: 361 CVKTDSHGGAMEISERFRLPIKMLGLSIKQTVEMQGEVGAAGSDVSRAIEMLESAIAVYE 420

Query: 421 KMLELILKEAKASYNQREETRG 443
           KMLELILKEAKASYNQREET+G
Sbjct: 421 KMLELILKEAKASYNQREETQG 442

[Close]
BLAST of Cla002443 vs. NCBI nr
Match: gi|645239874|ref|XP_008226336.1| (PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Prunus mume])

HSP 1 Score: 467.2 bits (1201), Expect = 3.1e-128
Identity = 249/440 (56.59%), Postives = 307/440 (69.77%), Query Frame = 1 

Query: 3   MPSSPQEVVLASSPDGPIVAYDASTGSPLASFNSSRSPRRGITRAGKSFIAVSHICPVTA 62
           M SSP E+VL SSPDGPI+AYDAS+G+ LA F  SRSPR G+   GKS+IA SHI P TA
Sbjct: 1   MSSSPHEIVLTSSPDGPIIAYDASSGAALAQFTGSRSPRGGLAIVGKSYIAASHISPTTA 60

Query: 63  SGSIHIYNWWTSSAFQSLAVPEPVAPLTATPDGFYLFAGGLSGYIHTLSLPSGDVLNSLP 122
           SGS+H+YNWW+S+AF +L V EPVAPLTAT DG YLFAGGLSG +H +S+PSGDVL  LP
Sbjct: 61  SGSVHLYNWWSSTAFHNLPVLEPVAPLTATSDGLYLFAGGLSGSVHGISIPSGDVLKPLP 120

Query: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPRESETKHILHQFLAHTDSVT 182
           AH KPVSCL +S D SLLISG DDGTIVV+PIFQLV A   ++  + ILH+F AH+DSVT
Sbjct: 121 AHSKPVSCLAISDDESLLISGSDDGTIVVVPIFQLVGASGYDNVEELILHRFAAHSDSVT 180

Query: 183 SIYSGMGTSSSQIVSCSLDGRCKFWSLLSETVLHTVVFPCAIFSVVLDPTETEFFAAGSD 242
           +I SG G  +SQI+SCSLD  CKFWSLL  T+L T+VFPC I  V L+PTE EF+ AGSD
Sbjct: 181 AIVSGTGLCNSQIISCSLDCTCKFWSLLRGTLLRTIVFPCTISWVALNPTEPEFYVAGSD 240

Query: 243 GLVYKGSLRHNNKHLVGTEYELIPPVSNDLVYKRSLRHKSKHHMGTSSELIPWSPKHDAA 302
           G V+KGSL+   + LV                               SELI W+PKH  A
Sbjct: 241 GSVHKGSLKVGTRQLV----------------------------TQGSELISWTPKHSGA 300

Query: 303 VVSIVIVNEGKHLISAAEDGSIWVWEVKKGEVIMALENEIGSISDLVMATEKGLGKEQ-- 362
           VVS+V+VN G++LISA+EDGS+WVWEV  G+VIMAL NE+GSISDLV AT     K    
Sbjct: 301 VVSVVMVNGGRNLISASEDGSVWVWEVDAGQVIMALGNEMGSISDLVAATGINCSKANGF 360

Query: 363 SVRTGSHGRAMEISERFRLPIK-MLELSINQRVDMQGAVAAAGSDVRRAIEMLESAIAVY 422
            +R G++G     +  FR   K ++ + I + ++M+ A+  A +D  RAI+MLESAIA+Y
Sbjct: 361 GMRNGAYGSG---NCHFRSSGKELMNMPIKKILEMEDALKVAANDRNRAIDMLESAIAMY 409

Query: 423 EKMLELILKEAKASYNQREE 440
           E++LELILKEAK      E+
Sbjct: 421 ERLLELILKEAKRGSRNNEQ 409

[Close]
BLAST of Cla002443 vs. NCBI nr
Match: gi|657978316|ref|XP_008381094.1| (PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Malus domestica])

HSP 1 Score: 436.0 bits (1120), Expect = 7.7e-119
Identity = 237/447 (53.02%), Postives = 292/447 (65.32%), Query Frame = 1 

Query: 3   MPSSPQEVVLASSPDGPIVAYDASTGSPLASFNSSRSPRRGITRAGKSFIAVSHICPVTA 62
           M SS  E+VL SSPDGPI+AYDAS+G+ LA F  SRSPRRG+T  GK +IA SH+ P T 
Sbjct: 1   MSSSSHEIVLXSSPDGPIIAYDASSGTALAQFTGSRSPRRGLTIVGKPYIAASHVSPTTG 60

Query: 63  SGSIHIYNWWTSSAFQSLAVPEPVAPLTATPDGFYLFAGGLSGYIHTLSLPSGDVLNSLP 122
           SGSIH+YNW +SSA  +  VPEPVAPL A  DG YLFAGGLSG +HTLS+PSGDVL SL 
Sbjct: 61  SGSIHLYNWCSSSALHNXQVPEPVAPLAAMSDGAYLFAGGLSGSVHTLSIPSGDVLKSLA 120

Query: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKP---RESETKHILHQFLAHTD 182
            H K VSCL +S D SLLISG DDG+IVV+PIFQLV A      ++    +LH+F AH+D
Sbjct: 121 VHNKXVSCLGISDDESLLISGSDDGSIVVVPIFQLVAASGYVLYDNVEDLVLHRFSAHSD 180

Query: 183 SVTSIYSGMGTSSSQIVSCSLDGRCKFWSLLSETVLHTVVFPCAIFSVVLDPTETEFFAA 242
           SVT++ SG+G  +SQ++SCSLDG CKFWSLL   +L TVVFPCAI  + L+P E EF+AA
Sbjct: 181 SVTAVVSGVGLYTSQVISCSLDGTCKFWSLLXAALLLTVVFPCAIXXIALNPREPEFYAA 240

Query: 243 GSDGLVYKGSLRHNNKHLVGTEYELIPPVSNDLVYKRSLRHKSKHHMGTSSELIPWSPKH 302
           GSDG V KG  R   + LV                                +LI WSPKH
Sbjct: 241 GSDGSVXKGLWRTGKRQLV----------------------------MQGKDLITWSPKH 300

Query: 303 DAAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGEVIMALENEIGSISDLVMATEKGLGK- 362
           D  VVS+V+VNEG++L+SA+EDGS+WVW+V  G+V+M L NE+GSISDLV AT     K 
Sbjct: 301 DGGVVSVVMVNEGRNLLSASEDGSVWVWQVDAGQVVMVLANEMGSISDLVAATGTNYSKG 360

Query: 363 ------EQSVRTGSHGRAMEISERFRLPIKMLELSINQRVDMQGAVAAAGSDVRRAIEML 422
                  +  R GS    +   E   +PIKML+        M   +  A  D  RAI+ML
Sbjct: 361 XDFSASNRGYRNGSCEFGLTGKELTSMPIKMLK--------MDEMLKVAARDRSRAIDML 411

Query: 423 ESAIAVYEKMLELILKEAKASYNQREE 440
           ESAI +YE++LELILKEAK S +  ++
Sbjct: 421 ESAIGMYERLLELILKEAKKSSSNNKQ 411

[Close]
BLAST of Cla002443 vs. NCBI nr
Match: gi|595881845|ref|XP_007212495.1| (hypothetical protein PRUPE_ppa017540mg [Prunus persica])

HSP 1 Score: 429.5 bits (1103), Expect = 7.2e-117
Identity = 225/392 (57.40%), Postives = 274/392 (69.90%), Query Frame = 1 

Query: 3   MPSSPQEVVLASSPDGPIVAYDASTGSPLASFNSSRSPRRGITRAGKSFIAVSHICPVTA 62
           M SSP E+VL SSPDGPI+AYDAS+G+ LA F  SRSPRRG+   GKS+IA SHI P TA
Sbjct: 1   MSSSPHEIVLTSSPDGPIIAYDASSGAALAQFTGSRSPRRGLAIVGKSYIAASHISPTTA 60

Query: 63  SGSIHIYNWWTSSAFQSLAVPEPVAPLTATPDGFYLFAGGLSGYIHTLSLPSGDVLNSLP 122
           SGS+H+YNWW+S+AF +L VPEPVAPLT T DG YLFAGGLSG +H +S+PSGDVL  LP
Sbjct: 61  SGSVHLYNWWSSTAFHNLPVPEPVAPLTVTSDGLYLFAGGLSGSVHGISIPSGDVLKPLP 120

Query: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPRESETKHILHQFLAHTDSVT 182
           AH KPVSCL +S D SLLISG DDGTIVV+PIFQLV A   +S  + ILH+F AH+DSVT
Sbjct: 121 AHSKPVSCLAISDDESLLISGSDDGTIVVVPIFQLVGASGYDSVEELILHRFAAHSDSVT 180

Query: 183 SIYSGMGTSSSQIVSCSLDGRCKFWSLLSETVLHTVVFPCAIFSVVLDPTETEFFAAGSD 242
           +I SGMG  +SQI+SCSLD  CKFWSLL  T+L T+VFPC I  V L+PT+ EF+ AGSD
Sbjct: 181 AIVSGMGLCNSQIISCSLDCTCKFWSLLRGTLLRTIVFPCTISWVALNPTQPEFYVAGSD 240

Query: 243 GLVYKGSLRHNNKHLVGTEYELIPPVSNDLVYKRSLRHKSKHHMGTSSELIPWSPKHDAA 302
           G V+KGSL+  ++ LV                               SELI W+PKH  A
Sbjct: 241 GSVHKGSLKVGSRQLV----------------------------TQGSELIAWTPKHGGA 300

Query: 303 VVSIVIVNEGKHLISAAEDGSIWVWEVKKGEVIMALENEIGSISDLVMATEKGLGKEQ-- 362
           VVS+V+VN G++LISA+EDGS+WVWEV  G+VIMAL NE+GSISDLV AT     K    
Sbjct: 301 VVSMVMVNGGRNLISASEDGSVWVWEVDAGQVIMALGNEMGSISDLVAATGINCSKANDV 360

Query: 363 -SVRTGSHGRAMEISE-RFRLPIKMLELSINQ 391
             V      RA+++ E    +  ++LEL + +
Sbjct: 361 LKVAANDRNRAIDMLESAIAMYERLLELILKE 364

The following BLAST results are available for this feature:
BLAST of Cla002443 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RID3_ARATH5.8e-3434.01Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana GN=RID3 PE=1 SV=1[more]
WDR18_DANRE1.2e-2326.24WD repeat-containing protein 18 OS=Danio rerio GN=wdr18 PE=2 SV=1[more]
WDR18_RAT2.7e-2324.85WD repeat-containing protein 18 OS=Rattus norvegicus GN=Wdr18 PE=2 SV=1[more]
WDR18_HUMAN1.3e-2224.04WD repeat-containing protein 18 OS=Homo sapiens GN=WDR18 PE=1 SV=2[more]
WDR18_MOUSE5.1e-2224.85WD repeat-containing protein 18 OS=Mus musculus GN=Wdr18 PE=1 SV=1[more]
BLAST of Cla002443 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0D5_CUCSA5.2e-22389.37Uncharacterized protein OS=Cucumis sativus GN=Csa_4G083560 PE=4 SV=1[more]
M5WIZ4_PRUPE5.0e-11757.40Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017540mg PE=4 SV=1[more]
W9R444_9ROSA1.2e-11552.14WD repeat-containing protein 18 OS=Morus notabilis GN=L484_017513 PE=4 SV=1[more]
B9T1J9_RICCO2.2e-11250.00WD-repeat protein, putative OS=Ricinus communis GN=RCOM_0216610 PE=4 SV=1[more]
A0A067KXT8_JATCU2.0e-11049.77Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03563 PE=4 SV=1[more]
BLAST of Cla002443 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659101671|ref|XP_008451730.1|1.5e-22389.12PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Cucumis melo][more]
gi|778697541|ref|XP_011654344.1|7.4e-22389.37PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Cucumis sativus][more]
gi|645239874|ref|XP_008226336.1|3.1e-12856.59PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Prunus mume][more]
gi|657978316|ref|XP_008381094.1|7.7e-11953.02PREDICTED: protein ROOT INITIATION DEFECTIVE 3-like [Malus domestica][more]
gi|595881845|ref|XP_007212495.1|7.2e-11757.40hypothetical protein PRUPE_ppa017540mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR011047Quinoprotein_ADH-like_supfam
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:1902184 negative regulation of shoot apical meristem development
biological_process GO:0030174 regulation of DNA-dependent DNA replication initiation
biological_process GO:0006364 rRNA processing
cellular_component GO:0005575 cellular_component
cellular_component GO:0080008 Cul4-RING E3 ubiquitin ligase complex
cellular_component GO:0005656 nuclear pre-replicative complex
cellular_component GO:0097344 Rix1 complex
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU70697watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla002443Cla002443.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU70697WMU70697transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPFAMPF00400WD40coord: 117..151
score: 5.3E-6coord: 171..208
score:
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 114..153
score: 8.6E-7coord: 289..328
score: 0.015coord: 167..208
score: 0.0015coord: 211..249
score: 1
IPR001680WD40 repeatPROFILEPS50082WD_REPEATS_2coord: 296..337
score: 12.28coord: 121..151
score: 10
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilyunknownSSF50998Quinoprotein alcohol dehydrogenase-likecoord: 10..251
score: 1.49E-43coord: 288..339
score: 1.49
IPR015943WD40/YVTN repeat-like-containing domainGENE3DG3DSA:2.130.10.10coord: 11..260
score: 2.1E-38coord: 298..350
score: 2.1
IPR017986WD40-repeat-containing domainPROFILEPS50294WD_REPEATS_REGIONcoord: 296..337
score: 11.55coord: 79..217
score: 12
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 315..329
scor
NoneNo IPR availableunknownCoilCoilcoord: 409..429
scor
NoneNo IPR availablePANTHERPTHR18763WD-REPEAT PROTEIN 18coord: 277..441
score: 3.2E-152coord: 5..252
score: 3.2E
NoneNo IPR availablePANTHERPTHR18763:SF3SUBFAMILY NOT NAMEDcoord: 277..441
score: 3.2E-152coord: 5..252
score: 3.2E