ClCG09G015320 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG09G015320
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Group II intron splicing factor CRS1-like
Location	CG_Chr09 : 29292827 .. 29303859 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGTCACCGAAGGTGGTGTTTGGAAGTTGGCCAAACGAACTTCCTAAATTAAATTAGAAAAAAGATAACCAATGAGTTTGAATAGTGTTTACTATTGAGACTCATGAAAAAAGATGTAGGAAGCCAAATGTCACGTGGTTAGGGTTTCCAACAAACCAAACGTGTGGCACTTGGGTGATCTTGCTTGACAAAGATGTACCAAGTAAGACTTTAGAGGTTTTAGGGTCATGCTTCCTTAGATACGGGCGTTAGGAAAGAGATGAAGTAGTGAGTAGTACGTTAGGAGAGTTTGAGCGAAAGAGAGCTTAAAGCTTCACCAACCTTAGAGAATCGTACAAGCTTTGAAGATTGCTTGGATTCTTAGATGCTTTACAAATGAGCACCTTGTGGTATTTATAGGGGCTTCTAACTGACCTAATTATGATGATTGACTTTAGATGTCGGTCATGAACACTTCTCGGCTCTTCTTATGTACATTGAGCTGGTTACATGTAGATTTATCTAGATACATATAGGTTAGGGTCATCCTAGGCACTACTAGAACTTCTAAGGCCTTATAGTATTAGGCCTTGGACGTGCAATCTGGTAGTGCCTAGATCCTTCAAGCGACATCCAGACATGCTGGGACATGGGCGTGGGCGTCGGCACCGCCTAGCACCACGTTGATCCTTCTAGACGCTATTAGGGCATTGTTGGGCCTTCTAGAGCTGTCCTAATTCTTCTAGAATCTTCCAAGACCTTCAAGGAGCATCTGGAGCTTGGCGTGAGCAAAGTGGCACAGACGTGGGCATGGGGTCTGTGTGGGGTGCGTGCGTAGAGCAGGTGATGGGTGTCACGGTCGTACTTCTCCAATCGTGCGACGCCATGACATTCTTTAACACATGGCCAGCCTAAGGGCTAACTTATAGCCAATACATTCTTTTCCCAAACCTTTATGCTTTGTTGGACCTTGGGCAAGTTCTAACTTCCTCACCTGAACTTCCGCTCCTTTGGCTTCACGATTTGTCTCGAATGCCTGTTCGACTTATCACACACGTGGGCATCCTTTCGCCCATCAATGGCTTTGTCTCGAAGAACGTTCTCAACTCAACGCTTACACCCAGATTTACTCTCGGCATTGCACATCGCCCCTTCACACATTACAAGTTCCTCTTTCACATATATGCACACTTATCAAGGATCGACCCTTGGATCGCTCGTATATATATCGAGACCAACAAGACATCCATCAACTCGGACATTATCTCAGTATGGCGACACTTGCGACCATACCATGTTGTACGAGAATACCATGCTAGAACCCAGCCATATATAGCAACCTCTAGTCCACCCGAGGAGGCACAATGTCGACACACCTGCGCCACCCAACACTGTCCTTGAGTTACTCCTCCTCACAGGAAGATGCCCGAGACGCTTGTCCTGCAACACTCGCCCACGCCATGACACACTCGTGTGCCATGTGGTAGCTCACTTAGGCTCTAAGGCTCAGGGGTGGTGGAGAGCCAACACCATGCCTTCCCCCCTTATAGTACATTCTAAACATTTCCTTCTTTGACACCTATGCATATGTAACGTGGCGAGGGGTCACTCGCCCATGTAGAGCGCCCGTCTGACTTCCGATTGACATGGAATTTGACGTGCTTCCGTCCTCTGTCGATATGGATCTAACTCTAGAGCCGCTCGTCCAAACTCATCACGATGCCCCTATTTTCGAGGTCATGGCCCGGGGCCCCACTTGGCCCCTATTGAGCTTTGCCATTGACACTTACCGATGGCATTGATGCTTGTCTTCTTACTTGTTGTTCAGCTTGACACGCTTATCCACTTATCTTGGGGTGTTGGGTGATGCACCATCCTCCTTGGTCGCATCATGACACTTCTCTTGGCCCTCTGTCATTGTCAGATGTGTCGACACTCTTGTGTCGCCACTGCACTGTCTACACCGTGGGGTCACAATCTACTATCTCCAAGTTAGATTGTGACAATGGGCGCGCACCTTGGACGTGTGCAGGATGCACACGTCAAACATCCTTGCTATGCGGCCATATGCGCAGCAATACCTTGTTTGGCAAGCATGTTTGCACACCACACGCGCTAGGGCTGGTTGTGCAGCCACCAGGGCATGTGCGGGAACGCATGAGTGCTTGATGGGGCGCTCTTGTGGGCATCAAGCTTCGGTTGTGTTGCGCGCTTGAGGCATGGACGAAGTCCTGCGACGTTGGCAGCCTTGCTTGGCACTTGAGTGTGCCATGCTTTGGGGCTTTGTGGTCCTTCCTCGACCCATCCTTGGCCTTGCTAGACGAGTCTTGGGGAGCATTAGCACAATTTGTTAGGCCATTTCTTTGGGACGTGACACAAAACTCCCTAGTTCCTTGTCCCCAACAAGGGTTGGGCTTAGAATGTCTAACCCATTCGATCCTAATCCTTGAAACAAACACCTTACTACGATTTATTTTCCCCTGTGTATATATATTTTTTCTTTTTAAAAAAAACTCCCATCTTCACACCCTGCAGCCGCACGACAACCCCCCATTCTCATCTTCTTCTTCGTTTAGCCCTAGTCGCCTGCCTCCCTTGCAAGTCACTGGAAGTCTGTCCGCCGGCAGCCACACTGGTAGTCTCCGTCTAGCCGAACTCTCGCCTAACCGCCGTCGATAGGAGCTGGTCGTCGCCGCCCACTGTTGTCGCGCCGCCGTTTTCTCTCACTGCGAACAGTAGCCACTGCCGCGCTTCCTTCGCCGTGGGTTCGCCTCCGCCGCCAGTCGCGCCCGGTTCACCGCCGCCGTGGATTCGCCGTCACCAGCGCTGGAACTCATTGGAATTGCATTTTTGTGGTGAGTTTTATGGTTTTTAAGCTTCCTTTGGTAAATCTGGATTACCCATTCGATCTTGGCTTGGGATTTAACTTACCCATGAAATTTGATGTTTGAATCAAGAGTTTTAGAGTTGTTGAAGTGTTATCCAGTAGGATAAAGACTGGATTGATGGCTTTTGGTGAGTCTTTGTTTTGCTTTCTTCAAGGATTTTGAATATCAAGTGGTTAATTTGCCTAATTATAGCTTTAAATATGATCTTTTGGAGGTTGGATTCGAGATACTATCCGGTGAAGGAAGCAAGTACGTTTTTGGTTTCCGTTCAAGTTTTATTGGAGATTATTTTGCTCCGATATCGGTATTTGAACTTAATCTTGAGGTACTACTGGAACCAACTTTGTACTATAGTGATCGGTTTTTCCTAGTAGTTAAAGAAAAATTGATATGTTACATATTTACAGAAGTTACATGAGCATAATGATATTTGTATATGACATGTTATGTTTAAATGTTACTACTGGAAGGCCTTCTTGTTGGGTGACGAACGTTATTCTTGGCTTCTTTAAGACTGCCTTAAGGTTTCGTGTGATTAAAGAAGATGTATGAGCATGATGGTACCACACGATATATACCATGATTTTTGTTGTGGAAGTTATTGATGGAATGTTATATATTAAGTGGGGGTGGTTTCTCCTAACCCTACCATGTTACAGCTTCATGGATTGATGGGTTCACTACTATGTTATAGTTCTGTGGATTGATGGGTTCACTTTCATATTACTTTGTGAGCCTTTGGGCCACCAGATTTGTGTTAGGACGTGTCAAACCGTTCACTAGACGACCATCCATGATTAATTGATGTATGCATGTCCCACTAATGTTAATGCATTTATTGGCCAGGAATGCATAGCTTGTGACCTCGGTAGTGGGGTTACTTATTGGGTACTTTTATACTACCCTTTCATATTATTTGTTTTTCAAGTAAAGGGAAAGACGCACCGATACTTTTGCTCATTTTTCATGTTTTAAATTTCAATCTTGATGTTTGAACTCATAGTTTTATTATTTGCTTTATTAAACATTTTATGAAATTTTTTCTGGTTGGTTTATATTTTTTTAGGGGACCCTAAACTGAGGTTTTAAGTTCATTGAATTTTATTCTATTAAAGTTATTTACTTAATAAAGTTGGTTGATTTTACATAGTTTGTAAAGAGTTTACATAGTGACCCTCTTAGGAATCTTGGAAAGTTGAGTCATTACAGGAGTTGTGTGAGCCAGTGAGGGCAAAAAAAAAAAAAAAAAAAAACCCCTAATCTATTTAAAGGTGGGGTTCGGGCAACCAAATCGACTATATCTTTTATAAAAAAAAAAAGTGACCCAAATCAAGCCGAACCGGTTTGGGTTGGGTTCTTACACTCCTACTAATTTGTATGTTTGGCTATCAATTTCCCTATATTTGGCTATCCTAATTCGAGCGCTAGAAAGAAACATGCGAAATGCCATTTTCGCAAATTTGCCCTGAATCCTGAAATTTAATCTTAATTAGCAAATTGTTGATGAAGAATCAGGCCAGCCATTCTTAGCTCTGGATTGTTTTAGATTCCCCTTTCATCTTCGTTCTGCAGTGAAGGAACTGTTGGCTAGGGATTGATTGATTTACGACCATGCCTCGGGGTTGCGCTCTATCCATCACCATTTCAAGGTACTTTTCTCCATCTCTTTAAATCTCATGGGTTTCATTCAATAGTTTTGGAATCGAATATATTTCCATATTTATCAAATTCATCTTAACAGAGTATATCTTCTCGTTTAAATCTGTAGTACTCATTATTTTGCATTATAACTAGAATTTTTTTAAGTAGATTTCATTTTGTCTATCAGATTTTCCATCTATGTATACATTTTCCCTTTGGAGGCATATTGAATTGGATGATTGTGATGTGATGTTTATGCAGGGATTCATTGTTTGGATTCATTTCTTTGATTAGAAATGTGTCACATCTATCTTTATTGAACATACCTGCATCGTTTGGGCAGTCTTCATATGGAAGTTGTGAGCATCAAATAAGTAATCGTACAGTAAAGTCTCTCCAAGAATCAACATATATACACTGTCCGTCTGGCTTCCTTTTTACTAGGAGATATAGTATGTGGGAGAGCTTTAGTGGGTTTAAAAAATGGCAATCTGTTAGGTATTTTAGCAATGCAGCTGTGGAGCTTAAGACAGACTGCAATATTGTCAGGTTTTCTTTTGGTGAGCCTTCTAGTAGTAACGGTTCCCCACTAAAACAAAAGAAGGTGGCAAAAACCAAATTTTCTAAGAAGGCCAAATTGAATGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAACCCCTAATCTATTTAAAGGTGGGGTTCGGGCAACCAAATCGACTATATCTTTTATAAAAAAAAAAAGTGACCCAAATCAAGCCGAACCGGTTTGGGTTGGGTTCTTACACTCCTACTAATTTGTATGTTTGGCTATCAATTTCCCTATATTTGGCTATCCTAATTCGAGCGCTAGAAAGAAACATGCGAAATGCCATTTTCGCAAATTTGCCCTGAATCCTGAAATTTAATCTTAATTAGCAAATTGTTGATGAAGAATCAGGCCAGCCATTCTTAGCTCTGGATTGTTTTAGATTCCCCTTTCATCTTCGTTCTGCAGTGAAGGAACTGTTGGCTAGGGATTGATTGATTTACGACCATGCCTCGGGGTTGCGCTCTATCCATCACCATTTCAAGGTACTTTTCTCCATCTCTTTAAATCTCATGGGTTTCATTCAATAGTTTTGGAATCGAATATATTTCCATATTTATCAAATTCATCTTAACAGAGTATATCTTCTCGTTTAAATCTGTAGTACTCATTATTTTGCATTATAACTAGAATTTTTTTAAGTAGATTTCATTTTGTCTATCAGATTTTCCATCTATGTATACATTTTCCCTTTGGAGGCATATTGAATTGGATGATTGTGATGTGATGTTTATGCAGGGATTCATTGTTTGGATTCATTTCTTTGATTAGAAATGTGTCACATCTATCTTTATTGAACATACCTGCATCGTTTGGGCAGTCTTCATATGGAAGTTGTGAGCATCAAATAAGTAATCGTACAGTAAAGTCTCTCCAAGAATCAACATATATACACTGTCCGTCTGGCTTCCTTTTTACTAGGAGATATAGTATGTGGGAGAGCTTTAGTGGGTTTAAAAAATGGCAATCTGTTAGGTATTTTAGCAATGCAGCTGTGGAGCTTAAGACAGACTGCAATATTGTCAGGTTTTCTTTTGGTGAGCCTTCTAGTAGTAACGGTTCCCCACTAAAACAAAAGAAGGTGGCAAAAACCAAATTTTCTAAGAAGGCCAAATTGAATGAACTCCGACTCTATCGTCTTAAGGCAAAAAAGAAGAAGACATCCCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGTTGGATACCATCTTTAATTTATAGTTATACTTCCAGCTTATAAGTTATAATTGAGTGTTAGTCTACTCTTCCTCTATAGAAACGTGTGCCACAATCTTCTTGTGAGAGGAGTATTAGATTTCAATGTTTACTTTTCAGCTTTTCATCCATATATCATATGTTTGTTACAAGTATGAAGGTGATTGAGGTTTGATGATCATTTTTCATATGAACTCTTTGCCACTTTTTCTCCGAATTCTTTTGCTTGACACATTTGTAAAACTATGAAAGTTTATTCTTTTGTCTGGTCTGTGTATTGACCGTGCATGACTGATGATTCATAATGTCCTGTGATTGTCATTAAAGTTTAACTTAAAGTTTCATGTAAAATATTTTCTTTTTTATAAGAATCGTTTGTAGTGAACAAAAAGAAGTATTTCATATAAAAATTTCAAAGCAAGAGCAAGAAGAAAAACAATTTATTTGAATCTTAAACCTTCAATGCAATGTAAGTGCATATTAAAGGTTCAGTTGAATTTTAAATTAATATTTAGGACTAATTGAATTGTTCTGAAACCTCTTAATGATCATTTTTCATATGAACTATGATGTTTTTTGATCTTTGAAGAAGCAAGTAATATATGTAGGCCAAAAGAAAAGAAGCGTGGCTAATTGAGAAGTTGAGGAAATTTGAGGTTCCAAAGTCTGTAATAGAAAAGTATGATCCTGAAATTCTTACTGAGGAAGAGAAGCACTACTTGAAGCGTACAGGGGAGAAAAAGAAGAACTATGTTCTATTGGGGAGGCGAGGAGTCTTTGGTGGTGTTGTTCTCAATATGCATTTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAGCCTGGGCAGGTTCATGAATATGCCGAAGAACTTGCTCGATTAAGCAAAGGCATTGTGATTGATATTAAACCCAACAATAGCATAATTCTTTATCGGGGAAAGAACTATGTGCAACCCGAAGTAATGTCACCTCCAGATACGCTATCAAAAGACAAGGTAAGCATATTTCACTCCTTATCTGGTTTGTAAATAAGAGAGGTCCAGACCTGAGTGCAGAAGGGGAGTGATGTAACTTGTAACTAATTTTTGTGTGAAGGATTGTGTTAGGATACTTAGTAACTAGAATCAAGATCTAGAATACTTTGAAATAGAAAAATAATTACAAGATAAATCAAGTATAAGGGCACTTGAAACCAAACTCTTGAGTATGCTAACCCAAGCCCTAGATCACCCCACGAATTGCCCACCTTCACTCGCTCACCCTCCTATTTATAACAAGATTCACTAACTTCCTATTTAATTACTCGTATACCCTTTATTAATGCCATACTAATATTCTTATCTGGGTATCTTACAAAATGGCACCCAATAAGTTTATAATTTTGTTTGTTTAGAGAAGGATGAAAGAGGAGAGACATCAGAGTAGATAATGATATAGATCGAATCATGAAAGTCTATAGTTTTCCTTTAATGTTGCAATTTTCCAATTTAAGAAGCTATTGGAAAATGACTCTAGCTTTAAACAAGCAACATAACTTTTCCTATTTTTTATTGCAGGCCTTGGAAAAATACAAGTATGAACAATCACTTGAACATACAAGTCAGTTCATTGAAAAATTGGAGAAAGAACTGGAAGATTTTCAGAAGCATCTTGCTCAGTTCAAGAAGAGGAAAGGAAGATGCTTAGAATCCATGGTTAACTCATGATCAGTAATGTTTACCTTTTACTTGCATTTCCCACTCACCGATTGTCGTAGATGGTTGATAGCTTTGCCAAAGAGCATTTTTTTTTTTAAAATCTTTTTTTCTAAATCTTGTTAGTTCTAGAGTATCTAGTGTTTAAATGGGTTTTATTGCAGGAAATTGAACTTGAGACGTTTTAGGTGAAATTCGAGCCAAACTGGAGCACTTACCAGTCAATTGGAACAACTAGGCTAAAAAAGTTTAAAATGACCAAATTGCCCTACGAAAGAGTATTGCAATGCCAAGCAATATTGGAAGGTAGTTACTATTGTGATTTATGTCCTAAATCTTGTAATTTGTAAATTGTAAATAAATTATTGAATAAATAAAGTGTTATTTATTATTTGCATAACTTAAATCCAATGGTATTTAATAAGTTATCCAATGGTATTTAATGTAACTTGAATGGTGTTTGGCAAATAAGTGAATTGTGTTCAAGTAATAATTTAAAAAGTGTATAGTATATGGATAAAGTTGAGTGTCTTATCTTGTTTTTTTACGAACGATTTGATTTAAATTGTTCATTTGGAGACATGTGAGTGAGGTATCTTACACAATTAGTTTGTATAAGACTAGACCATGAAATATATAATCTTTCTTTATAAACAACATAAATTGAAGAAATTAATCGATTTCAATTGTGAATGAGTTATGAATTTCTAGTTCACGTGGATCGTGATTTGTATGGGCGAGAGTGGCTCTAGTCACCGACTCAATATGCCTACTAGTTTGGGAATGAAGTCAAGTGGGAACTTGAGAACATAATTATACAAGGTAGAATTAACCACTTCCTACCTTCAAAGGGTAAGTAGATAAGTTGTTCAAAGGATCGATATATTGTTTATGTTTATTAGATCATGTTAGAGACCTCAGAGGAAAAGTGACAGAATGCCCAAATTTCTCGAAAGTTAGCGTGTATTTGGGCATTCTGTCACTTTTTCTGTCAACTCCATCAACTTACGGAAAACATGAACTTACTGGAAAAAGTTGGCGTGTATTTGGGCATTCTGTCACTTTTCCTGTCAAGTCCATCAACTTACGGAAAACATGAACTTACGGAAAAAATGACAGCGATAAAAAACGGCATTTCGACTTGGTGATTTTAGACATTCCTACACATTATTAGACTTTTTTTACATTAAAATTTTGGATTTTCTTTTCCGTTTTTTATCGTTTTTTACCACGATGTATTCGAAAACCCAAAATTTCCAGAAATCAGCGTTTCAATGGACTTTGGTGAAGGAATAAGATTTTTGGGGGTGTTTATGTCATTTCACCACGTGGGACCTATCTCTGAAAAGTTGAAAATGGATTAGAAAAATAACTTTTTTAGGTTAGTTTTGTCCCATCATAGCAATTTCCCCGATAACTTGATTCAAAACATTTTATCAGAGGTTGAGTATTAGGGTTTGCCTATATTCCATTACTATAGACAATTTGTTTCTTTCTTTTCCAATTGGGGAGGGAAATTAATGCGCTCCAAGCCGGTTCATCTTTGTGTTAACCACCGACAGAACTTCAATAAATTTGTCTTTGCTCAAAATCTAAATGATTTATTGAAAGTATGGAAACTAGAATGGAATATGTGAAATTACAAAGAGAATTATATTATAACAAAAAAAAAAAAATAATGTTGGATTCTTCAAATGAAGATTTTTTTTTTTTATCTTTTGAATTTAGAAAACTCTTTATTACTTTATTATGAATATTTTATTTTTATTTTTATTTTATTTTATTTTTATTATTTTTTTTTATCAGGATTGAAAACTGAATTTAAGATGGAAAATTTAGGAGCTTGAATTTAATTGGGAGTTTTTGGAGGATTTGAGTTAATTTAGAATTCTAGTGGGAAAGAGGAAATATATATAGGATTTAAAGTAGGAAAGAGTAAAAAGGGTAGATTTGTCTTATAAAAATAATTAGGGTTTTTAAATATTAGGTCGTATTTGGAAGCGCGTGCAAAAATCTCTCCTTCATCATCTTCTTCGTGTTTTCTTCGCCGGCGTGGAAGCTTCCAAGATCGGTTTTCAAACCCCCACCGTTTTCCTCGCCGGAGTCGTGGTCGCCGCTGGTTGCTCGACTCGTTTGCCCTGAGTCGCAAAATCCGCTGCTACCTGACGTTCGTGGGTGTTCCAGTCCACCGTCCGTTCACTGTTCAAGTTGGCAGCACGCCGCCGTGCGATTCGTTCGGCCGTACGTCATCAGCGCTGCCCATTTCGTCGTAGCCGTTGTGGCCGGCCGTGGGAGTGAGTTCTCTTCTTGATTTCTTTTCCTCTCCGTTTTTCCTCCCCGATTTCACCCTTCCTCACAGGTCCGCAGCCCTTCACGCGAGACCCAGTCGTGTTCTGCCCAGCTTGTCGCCGGAAGTTTCCGCCACCGTTCTTCACTAGCCAGAATTTCGACATTTGGGTTATTTTCTTGATTTGGATCAGACGGCCTAGTTCAAGAGTTGGGTAGTCGCAGTTTTAGGGAGTTGGTAGCTGCTGGTATAAAATTAATTAAGCTTCATGTAAGTGGTTTACTACGGGTTCCGGGTTCGCTTACGAATCGGCGCCCAACTACGCCATTGCCATTATGATAAGATAAGTGTATACTTTGTAAGCATGATTTGATTACTGGTTTGAGAACCGGTGCCCTAACTACAGCCTCATGAAGTACCGTAAGCCCTTCCTGAACTACCGTAAGCCTCCCGAACTTATAACCAACTTATGAAATGTTATGGGTGTTACCGTGAGTCTCATAAACATAAAGGCTCCATGTATGTGTTTTGTATGCTTTTTACGATGGATATGATGATATGATTATGTTTTGTATGCTTTTTATGATGGA

mRNA sequence

ATGCAGTCACCGAAGGTGCCGAACTCTCGCCTAACCGCCGTCGATAGGAGCTGGTCGTCGCCGCCCACTGTTGTCGCGCCGCCGTTTTCTCTCACTGCGAACAGTAGCCACTGCCGCGCTTCCTTCGCCGTGGGTTCGCCTCCGCCGCCAGTCGCGCCCGGTTCACCGCCGCCGTGGATTCGCCGTCACCAGCGCTGGAACTCATTGGAATTGCATTTTTGTGGGGACCCTAAACTGAGGGATTCATTGTTTGGATTCATTTCTTTGATTAGAAATGTGTCACATCTATCTTTATTGAACATACCTGCATCGTTTGGGCAGTCTTCATATGGAAGTTGTGAGCATCAAATAAGTAATCGTACAGTAAAGTCTCTCCAAGAATCAACATATATACACTGTCCGTCTGGCTTCCTTTTTACTAGGAGATATAGTATGTGGGAGAGCTTTAGTGGGTTTAAAAAATGGCAATCTGTTAGGTATTTTAGCAATGCAGCTGTGGAGCTTAAGACAGACTGCAATATTGTCAGGTTTTCTTTTGGTGAGCCTTCTAGTAGTAACGGTTCCCCACTAAAACAAAAGAAGGTGGCAAAAACCAAATTTTCTAAGAAGGCCAAATTGAATGAACTCCGACTCTATCGTCTTAAGGCAAAAAAGAAGAAGACATCCCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGCCAAAAGAAAAGAAGCGTGGCTAATTGAGAAGTTGAGGAAATTTGAGGTTCCAAAGTCTGTAATAGAAAAGTATGATCCTGAAATTCTTACTGAGGAAGAGAAGCACTACTTGAAGCGTACAGGGGAGAAAAAGAAGAACTATGTTCTATTGGGGAGGCGAGGAGTCTTTGGTGGTGTTGTTCTCAATATGCATTTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAGCCTGGGCAGGTTCATGAATATGCCGAAGAACTTGCTCGATTAAGCAAAGGCATTGTGATTGATATTAAACCCAACAATAGCATAATTCTTTATCGGGGAAAGAACTATGTGCAACCCGAAGTAATGTCACCTCCAGATACGCTATCAAAAGACAAGGCCTTGGAAAAATACAAGTATGAACAATCACTTGAACATACAAGTCAGTTCATTGAAAAATTGGAGAAAGAACTGGAAGATTTTCAGAAGCATCTTGCTCAGTTCAAGAAGAGGAAAGGAAGATGCTTAGAATCCATGGTCGTATTTGGAAGCGCGTGCAAAAATCTCTCCTTCATCATCTTCTTCGTGTTTTCTTCGCCGGCGTGGAAGCTTCCAAGATCGGTTTTCAAACCCCCACCGTTTTCCTCGCCGGAGTCGTGGTCGCCGCTGGTTGCTCGACTCGTTTGCCCTGAGTCGCAAAATCCGCTGCTACCTGACGTTCGTGGGTGTTCCAGTCCACCGTCCGTTCACTGTTCAAGTTGGCAGCACGCCGCCGTGCGATTCGTTCGGCCGTACGTCATCAGCGCTGCCCATTTCGTCGTAGCCGTTGTGGCCGGCCGTGGGAGTCCGCAGCCCTTCACGCGAGACCCAGTCGTGTTCTGCCCAGCTTGTCGCCGGAAGTTTCCGCCACCGTTCTTCACTAGCCAGAATTTCGACATTTGGGTTATTTTCTTGATTTGGATCAGACGGCCTAGTTCAAGAGTTGGGTAGTCGCAGTTTTAGGGAGTTGGTAGCTGCTGGTATAAAATTAATTAAGCTTCATGTAAGTGGTTTACTACGGGTTCCGGGTTCGCTTACGAATCGGCGCCCAACTACGCCATTGCCATTATGATAAGATAAGTGTATACTTTGTAAGCATGATTTGATTACTGGTTTGAGAACCGGTGCCCTAACTACAGCCTCATGAAGTACCGTAAGCCCTTCCTGAACTACCGTAAGCCTCCCGAACTTATAACCAACTTATGAAATGTTATGGGTGTTACCGTGAGTCTCATAAACATAAAGGCTCCATGTATGTGTTTTGTATGCTTTTTACGATGGATATGATGATATGATTATGTTTTGTATGCTTTTTATGATGGA

Coding sequence (CDS)

ATGCAGTCACCGAAGGTGCCGAACTCTCGCCTAACCGCCGTCGATAGGAGCTGGTCGTCGCCGCCCACTGTTGTCGCGCCGCCGTTTTCTCTCACTGCGAACAGTAGCCACTGCCGCGCTTCCTTCGCCGTGGGTTCGCCTCCGCCGCCAGTCGCGCCCGGTTCACCGCCGCCGTGGATTCGCCGTCACCAGCGCTGGAACTCATTGGAATTGCATTTTTGTGGGGACCCTAAACTGAGGGATTCATTGTTTGGATTCATTTCTTTGATTAGAAATGTGTCACATCTATCTTTATTGAACATACCTGCATCGTTTGGGCAGTCTTCATATGGAAGTTGTGAGCATCAAATAAGTAATCGTACAGTAAAGTCTCTCCAAGAATCAACATATATACACTGTCCGTCTGGCTTCCTTTTTACTAGGAGATATAGTATGTGGGAGAGCTTTAGTGGGTTTAAAAAATGGCAATCTGTTAGGTATTTTAGCAATGCAGCTGTGGAGCTTAAGACAGACTGCAATATTGTCAGGTTTTCTTTTGGTGAGCCTTCTAGTAGTAACGGTTCCCCACTAAAACAAAAGAAGGTGGCAAAAACCAAATTTTCTAAGAAGGCCAAATTGAATGAACTCCGACTCTATCGTCTTAAGGCAAAAAAGAAGAAGACATCCCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGCCAAAAGAAAAGAAGCGTGGCTAATTGAGAAGTTGAGGAAATTTGAGGTTCCAAAGTCTGTAATAGAAAAGTATGATCCTGAAATTCTTACTGAGGAAGAGAAGCACTACTTGAAGCGTACAGGGGAGAAAAAGAAGAACTATGTTCTATTGGGGAGGCGAGGAGTCTTTGGTGGTGTTGTTCTCAATATGCATTTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAGCCTGGGCAGGTTCATGAATATGCCGAAGAACTTGCTCGATTAAGCAAAGGCATTGTGATTGATATTAAACCCAACAATAGCATAATTCTTTATCGGGGAAAGAACTATGTGCAACCCGAAGTAATGTCACCTCCAGATACGCTATCAAAAGACAAGGCCTTGGAAAAATACAAGTATGAACAATCACTTGAACATACAAGTCAGTTCATTGAAAAATTGGAGAAAGAACTGGAAGATTTTCAGAAGCATCTTGCTCAGTTCAAGAAGAGGAAAGGAAGATGCTTAGAATCCATGGTCGTATTTGGAAGCGCGTGCAAAAATCTCTCCTTCATCATCTTCTTCGTGTTTTCTTCGCCGGCGTGGAAGCTTCCAAGATCGGTTTTCAAACCCCCACCGTTTTCCTCGCCGGAGTCGTGGTCGCCGCTGGTTGCTCGACTCGTTTGCCCTGAGTCGCAAAATCCGCTGCTACCTGACGTTCGTGGGTGTTCCAGTCCACCGTCCGTTCACTGTTCAAGTTGGCAGCACGCCGCCGTGCGATTCGTTCGGCCGTACGTCATCAGCGCTGCCCATTTCGTCGTAGCCGTTGTGGCCGGCCGTGGGAGTCCGCAGCCCTTCACGCGAGACCCAGTCGTGTTCTGCCCAGCTTGTCGCCGGAAGTTTCCGCCACCGTTCTTCACTAGCCAGAATTTCGACATTTGGGTTATTTTCTTGATTTGGATCAGACGGCCTAGTTCAAGAGTTGGGTAG

Protein sequence

MQSPKVPNSRLTAVDRSWSSPPTVVAPPFSLTANSSHCRASFAVGSPPPPVAPGSPPPWIRRHQRWNSLELHFCGDPKLRDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVELKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKKRKGRCLESMVVFGSACKNLSFIIFFVFSSPAWKLPRSVFKPPPFSSPESWSPLVARLVCPESQNPLLPDVRGCSSPPSVHCSSWQHAAVRFVRPYVISAAHFVVAVVAGRGSPQPFTRDPVVFCPACRRKFPPPFFTSQNFDIWVIFLIWIRRPSSRVG

Homology

[Close]

BLAST of ClCG09G015320 vs. Swiss-Prot
Match: Y3544_ARATH (Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana GN=At3g25440 PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.1e-45
Identity = 102/218 (46.79%), Postives = 139/218 (63.76%), Query Frame = 1


Query: 183 SSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAW 242
           SS +G    + K  K K  K+A +  L+ +R K KK+      E +I   L KA++KE  
Sbjct: 96  SSQDGDSCTKLKRKKLK-GKRAVVRWLKFFRWKKKKEFERMTSEEKILNKLRKARKKEER 155

Query: 243 LIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLH 302
           L+E ++K E  +S    +DPEILT EE  Y  + G K KNYV +GRRG++ GV+LNMHLH
Sbjct: 156 LMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLH 215

Query: 303 WKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQP--EVMS 362
           WKKH+T++V+ K   P +V E A ELARL+ GIV+D+   N+II+YRGKNYVQP  E+MS
Sbjct: 216 WKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMS 275

Query: 363 PPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQ 399
           P  TL + KAL+K K   +L    ++I +LE+EL+  Q
Sbjct: 276 PRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQ 312

[Close]

BLAST of ClCG09G015320 vs. Swiss-Prot
Match: CFM2_ARATH (CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana GN=CFM2 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.1e-24
Identity = 71/232 (30.60%), Postives = 121/232 (52.16%), Query Frame = 1


Query: 180 GEPSSSNGSPLKQKKVAKT-KFSKKAKLNELRLYRLKAKKKKTSP----NPEVRIRYSLE 239
           G   + N   +K + V +  +   K + + ++ +++K++++ +         +++  +LE
Sbjct: 492 GNKLTENEEEIKPRAVKEDIELEAKDQKDHIQTHQMKSRQRNSPEAILEKTSMKLSMALE 551

Query: 240 KAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGG 299
           K    E  L + L   E P+  +   D E +T +EK+ L++ G K K ++LLGRRGVF G
Sbjct: 552 KKANAEKVLAD-LENRESPQ--LSDIDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDG 611

Query: 300 VVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIK---PNNSIILYRGK 359
            + NMHLHWK  E VK+IC        H+ AE L   S GI++ ++      +II+YRGK
Sbjct: 612 TIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRGK 671

Query: 360 NYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQ 404
           NY +P+ + P   LSK +AL++    Q  +     + KL   +E+  + L +
Sbjct: 672 NYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVE 720

[Close]

BLAST of ClCG09G015320 vs. Swiss-Prot
Match: CFM3A_ARATH (CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=CFM3A PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.7e-20
Identity = 65/185 (35.14%), Postives = 98/185 (52.97%), Query Frame = 1


Query: 233 LEKAKRKEAWLIEKLRKFEVPKSVIE--------KYDPEILTEEEKHYLKRTGEKKKNYV 292
           + K +RK A+   KL K E   + +E        + DPE +T+EE+   ++ G K K ++
Sbjct: 598 VRKLERKLAFAERKLLKAERGLAKVEVCLKPAEQREDPESITDEERFMFRKLGLKMKAFL 657

Query: 293 LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDI---KP 352
           LLGRRGVF G V NMHLHWK  E VK+I K      V + A  L   S GI++ I     
Sbjct: 658 LLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTK 717

Query: 353 NNSIILYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHL 407
             +II+YRG++Y +P ++ P + L+K KAL +    Q  E   + I  ++ + +  +  +
Sbjct: 718 GYAIIVYRGQDYKRPTMLRPKNLLTKRKALARSIELQRREGLLKHISTMQAKAKQLRAEI 777

[Close]

BLAST of ClCG09G015320 vs. Swiss-Prot
Match: CFM3_ORYSJ (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CFM3 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.6e-20
Identity = 61/182 (33.52%), Postives = 94/182 (51.65%), Query Frame = 1


Query: 228 RIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDP-EILTEEEKHYLKRTGEKKKNYVLL 287
           ++ + L+ A++K       L K E      E   P E +T+EE+   ++ G + K ++LL
Sbjct: 554 KLEWKLQLAQKKIEKAERVLGKVETALKPTEGIQPPETITDEERFMFRKLGLRMKAFLLL 613

Query: 288 GRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVID---IKPNN 347
           GRRGVF G + NMHLHWK  E VK++ K    G V + A  L   S GI++    +    
Sbjct: 614 GRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEAESGGILVSVDKVSKGY 673

Query: 348 SIILYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQ 406
           +I+++RGK+Y +P  + P + LSK KAL +    Q  E  S  I  L + ++  +  L Q
Sbjct: 674 AIVVFRGKDYARPSKLRPRNLLSKRKALARSIEIQRREALSHHIATLNRRVKKLKAELLQ 733

[Close]

BLAST of ClCG09G015320 vs. Swiss-Prot
Match: CFM3_MAIZE (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays GN=CFM3 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 4.7e-20
Identity = 62/179 (34.64%), Postives = 93/179 (51.96%), Query Frame = 1


Query: 233 LEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVF 292
           +EKA+R    +   LR  E      +   PE +T+EE+   ++ G + K ++LLGRRGVF
Sbjct: 558 MEKAERVLGKVETALRPTE------DSRPPETITDEERFMFRKLGLRMKAFLLLGRRGVF 617

Query: 293 GGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVID---IKPNNSIILYR 352
            G + NMHLHWK  E VK++ K      V   A  L   S GI++    +    +I+++R
Sbjct: 618 DGTIENMHLHWKYRELVKILVKAKSFADVKRIALSLEAESGGILVSVDKVSKGYAIVVFR 677

Query: 353 GKNYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKKRK 409
           GKNY +P  + P + LSK KAL +    Q  +  S+   KL +++E  +  L Q +  K
Sbjct: 678 GKNYRRPSSLRPRNLLSKRKALARSIELQRHQALSRHFAKLNRKVERLKAELVQMEDVK 730

[Close]

BLAST of ClCG09G015320 vs. TrEMBL
Match: A0A0A0K5Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G062730 PE=4 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 2.6e-158
Identity = 291/338 (86.09%), Postives = 303/338 (89.64%), Query Frame = 1


Query: 80  RDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLF 139
           R SLFGFI LIRNVS LSLL+IP SF QSS+GS EHQ S+  VKSL ES    CP GF F
Sbjct: 14  RGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLNESMSRDCPPGFSF 73

Query: 140 TRRYSMWESFSGFKKWQSVRYFSNAAVELKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTK 199
           TRRYSM ES  GFK+WQSVR+FSNA VELKTD N VRFSFG PSS+NGS LKQK VAKTK
Sbjct: 74  TRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTNGSRLKQK-VAKTK 133

Query: 200 FSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEK 259
            SKKAKLNELR YRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFE+PK  +EK
Sbjct: 134 MSKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEIPKPFVEK 193

Query: 260 YDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPG 319
           YDPEILTEEEKHYLKRTGEKKKN+VLLGRRGVFGGVVLNMH+HWKKHETVKVICKPCKPG
Sbjct: 194 YDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPG 253

Query: 320 QVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQS 379
           QVHEYAEEL RLSKGIVIDIKPNNSII YRGKNYVQPEVMSPP+TLSKDKALEKYKYEQS
Sbjct: 254 QVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLSKDKALEKYKYEQS 313

Query: 380 LEHTSQFIEKLEKELEDFQKHLAQFKKRK-GRCLESMV 417
           LEHTSQFIEKLEKELEDFQKHLAQFK+RK    LESMV
Sbjct: 314 LEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAALESMV 350

[Close]

BLAST of ClCG09G015320 vs. TrEMBL
Match: A0A067LDM8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09572 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 1.7e-117
Identity = 223/322 (69.25%), Postives = 253/322 (78.57%), Query Frame = 1


Query: 88  SLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWE 147
           SL +  S   LLN   S    SY         R V    E+  +  P+ FL T+R +++ 
Sbjct: 40  SLHKATSVTPLLNWTTSVNLRSY---------RAVIPFLEAVRVSSPN-FLLTQRLNVFA 99

Query: 148 SFSGFKKWQSVRYFSNAAVELKTDCNIVRFSFGEPSSSNGSPLKQKKVAK-TKFSKKAKL 207
           S S  + W   R+ S A+ ELKTD ++VRF+FG+    NGS  K+KK  K  K S+KAKL
Sbjct: 100 SHSVLRSWVYRRWMSRASFELKTDNDVVRFAFGKQPGKNGSSEKRKKTTKRVKMSRKAKL 159

Query: 208 NELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILT 267
           NELR YRLKAKKKK SPNPEVRIRY LEKAKRKE WLIEKLRKFEVPK   E YDPEILT
Sbjct: 160 NELRFYRLKAKKKKNSPNPEVRIRYKLEKAKRKEVWLIEKLRKFEVPKIPAEVYDPEILT 219

Query: 268 EEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAE 327
           EEEKHYLKRTGEKKKN+VL+GRRGVFGGVVLNMHLHWKKHETVKVIC+PCKPGQ+HEYAE
Sbjct: 220 EEEKHYLKRTGEKKKNFVLVGRRGVFGGVVLNMHLHWKKHETVKVICRPCKPGQIHEYAE 279

Query: 328 ELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQF 387
           ELARLSKGIVIDIKPNNSI+ YRGKNYVQPEVMSPP+TLSK KALEKYKYEQSLEHTSQF
Sbjct: 280 ELARLSKGIVIDIKPNNSIVFYRGKNYVQPEVMSPPNTLSKQKALEKYKYEQSLEHTSQF 339

Query: 388 IEKLEKELEDFQKHLAQFKKRK 409
           IEKLEKELE++ +H+A+++K K
Sbjct: 340 IEKLEKELEEYLEHVARYRKLK 351

[Close]

BLAST of ClCG09G015320 vs. TrEMBL
Match: K7KRJ8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G236500 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 8.6e-114
Identity = 217/330 (65.76%), Postives = 251/330 (76.06%), Query Frame = 1


Query: 80  RDSLFGFISLIRNVSHLSLLNIPASFGQS-SYGSCEHQISNRTVKSLQESTYIHCPSGFL 139
           RDSLF    L+ +V  ++      S+  S +   C +Q + RT   L   + +   SGFL
Sbjct: 20  RDSLFWLCCLVEHVPTIASCPTTTSYFWSFTPDKCIYQRTYRTPSHLSGVSSLASRSGFL 79

Query: 140 FTRRYSMWESFSGFKKWQSVRYFSNAAVELKTDCNIVRFSFGEPSSSNGSPLKQKKVAKT 199
             +R +++ S      W   RY SN +VELKT  +++RFS G+    N +   Q    K 
Sbjct: 80  LMQRSNIFGSHDILGSWLPARYISNESVELKTHNDVIRFSLGKSDDINNAKKSQLN-KKF 139

Query: 200 KFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIE 259
           K S+KAKLNELR YRLKAKKK  SPNPEVRIRY LEKAKRKE WLIEKLRKF+VPK   E
Sbjct: 140 KMSRKAKLNELRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKETWLIEKLRKFDVPKPPPE 199

Query: 260 KYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKP 319
            YDPEILTEEE+HYLKRTGE+KK+YV +GRRGVFGGVVLNMHLHWK HETVKVICKPCKP
Sbjct: 200 TYDPEILTEEERHYLKRTGERKKHYVPVGRRGVFGGVVLNMHLHWKNHETVKVICKPCKP 259

Query: 320 GQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQ 379
           GQVHEYAEELARLSKGIVIDIKPNN+II YRGKNYV+PEVMSPP+TLSK KALEKY+YEQ
Sbjct: 260 GQVHEYAEELARLSKGIVIDIKPNNTIIFYRGKNYVKPEVMSPPNTLSKAKALEKYRYEQ 319

Query: 380 SLEHTSQFIEKLEKELEDFQKHLAQFKKRK 409
           SLEHTSQFIEKLEKELE++ +HLA+FKK K
Sbjct: 320 SLEHTSQFIEKLEKELEEYHQHLAKFKKGK 348

[Close]

BLAST of ClCG09G015320 vs. TrEMBL
Match: K7L4Y2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G043700 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 4.3e-113
Identity = 216/330 (65.45%), Postives = 248/330 (75.15%), Query Frame = 1


Query: 80  RDSLFGFISLIRNVSHLSLLNIPASFGQS-SYGSCEHQISNRTVKSLQESTYIHCPSGFL 139
           RDSLF    L+ +V  ++      S+  S +   C HQ + RT + L     +    GFL
Sbjct: 20  RDSLFWLCCLVEHVPTIASSPTTTSYFWSFTPDKCIHQRTYRTPRHLSRVPSLSSRPGFL 79

Query: 140 FTRRYSMWESFSGFKKWQSVRYFSNAAVELKTDCNIVRFSFGEPSSSNGSPLKQKKVAKT 199
             +R +++        W   RY SN +VELKTD N+VRFS  +    N     Q    + 
Sbjct: 80  LMQRSNIFGIHDILGNWLPARYISNESVELKTDNNVVRFSLDKSDDINYGKKSQLN-KRV 139

Query: 200 KFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIE 259
           K S+KAKLNELR YRLKAKKK  SPNPEVRI Y LEKAKRKE WL+EKLRKF+VPKS  E
Sbjct: 140 KMSRKAKLNELRFYRLKAKKKMISPNPEVRITYKLEKAKRKETWLVEKLRKFDVPKSPPE 199

Query: 260 KYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKP 319
            +DPEILTEEE+HYLKRTGEKKK+YV +GRRGVFGGVVLNMHLHWK HETVKVICKPCKP
Sbjct: 200 TFDPEILTEEERHYLKRTGEKKKHYVPVGRRGVFGGVVLNMHLHWKNHETVKVICKPCKP 259

Query: 320 GQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQ 379
           GQVHEYAEELARLSKGIVIDIKPNN+II YRGKNYVQPEVMSPP+TLSK KALEKY+YEQ
Sbjct: 260 GQVHEYAEELARLSKGIVIDIKPNNTIIFYRGKNYVQPEVMSPPNTLSKVKALEKYRYEQ 319

Query: 380 SLEHTSQFIEKLEKELEDFQKHLAQFKKRK 409
           SLEHTSQFIE+LEKELE++ +HLA+FKK K
Sbjct: 320 SLEHTSQFIERLEKELEEYHQHLAKFKKGK 348

[Close]

BLAST of ClCG09G015320 vs. TrEMBL
Match: A0A0B2Q5J0_GLYSO (Putative CRM domain-containing protein, chloroplastic OS=Glycine soja GN=glysoja_002652 PE=4 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 4.3e-113
Identity = 216/330 (65.45%), Postives = 248/330 (75.15%), Query Frame = 1


Query: 80  RDSLFGFISLIRNVSHLSLLNIPASFGQS-SYGSCEHQISNRTVKSLQESTYIHCPSGFL 139
           RDSLF    L+ +V  ++      S+  S +   C HQ + RT + L     +    GFL
Sbjct: 20  RDSLFWLCCLVEHVPTIASSPTTTSYFWSFTPDKCIHQRTYRTPRHLSRVPSLSSRPGFL 79

Query: 140 FTRRYSMWESFSGFKKWQSVRYFSNAAVELKTDCNIVRFSFGEPSSSNGSPLKQKKVAKT 199
             +R +++        W   RY SN +VELKTD N+VRFS  +    N     Q    + 
Sbjct: 80  LMQRSNIFGIHDILGNWLPARYISNESVELKTDNNVVRFSLDKSDDINYGKKSQLN-KRV 139

Query: 200 KFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIE 259
           K S+KAKLNELR YRLKAKKK  SPNPEVRI Y LEKAKRKE WL+EKLRKF+VPKS  E
Sbjct: 140 KMSRKAKLNELRFYRLKAKKKMISPNPEVRITYKLEKAKRKETWLVEKLRKFDVPKSPPE 199

Query: 260 KYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKP 319
            +DPEILTEEE+HYLKRTGEKKK+YV +GRRGVFGGVVLNMHLHWK HETVKVICKPCKP
Sbjct: 200 TFDPEILTEEERHYLKRTGEKKKHYVPVGRRGVFGGVVLNMHLHWKNHETVKVICKPCKP 259

Query: 320 GQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQ 379
           GQVHEYAEELARLSKGIVIDIKPNN+II YRGKNYVQPEVMSPP+TLSK KALEKY+YEQ
Sbjct: 260 GQVHEYAEELARLSKGIVIDIKPNNTIIFYRGKNYVQPEVMSPPNTLSKVKALEKYRYEQ 319

Query: 380 SLEHTSQFIEKLEKELEDFQKHLAQFKKRK 409
           SLEHTSQFIE+LEKELE++ +HLA+FKK K
Sbjct: 320 SLEHTSQFIERLEKELEEYHQHLAKFKKGK 348

[Close]

BLAST of ClCG09G015320 vs. TAIR10
Match: AT4G13070.1 (AT4G13070.1 RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 402.9 bits (1034), Expect = 3.2e-112
Identity = 200/282 (70.92%), Postives = 232/282 (82.27%), Query Frame = 1


Query: 131 IHCPSGFLFTRRYSMWESFSGFKKWQSVRYFSNAAVELKTDCNIVRFSFGEPSSSNGSPL 190
           + C S      +   W  F+ +    S RY SN+ +EL+TD N+VRF+F   SSS  + +
Sbjct: 46  VQCKSASFDVSQAQRWNLFA-YDGLFSRRYLSNSTIELRTDDNVVRFAFNNVSSSGNNVV 105

Query: 191 ---KQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKL 250
              K+KK  + K S+KAK+NELR YRLKAKKK  SPNPEVRIRY LEKAKRKE WLIEKL
Sbjct: 106 PTRKEKKWKRAKLSRKAKVNELRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKEEWLIEKL 165

Query: 251 RKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHE 310
           RK++VPKS  E YDPE LTEEE+HYLKRTGEK+KN+VL+GRRGVFGGVVLN+HLHWKKHE
Sbjct: 166 RKYDVPKSPAEPYDPESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHE 225

Query: 311 TVKVICKPC-KPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLS 370
           TVKVICKPC KPGQVHEYAEELARLSKGIVID+KPNN+I+LYRGKNYV+PEVMSP DTLS
Sbjct: 226 TVKVICKPCNKPGQVHEYAEELARLSKGIVIDVKPNNTIVLYRGKNYVRPEVMSPVDTLS 285

Query: 371 KDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKKRK 409
           KDKALEKY+YEQSLEHTS+FIEKLEKELE++ K++A+ KK+K
Sbjct: 286 KDKALEKYRYEQSLEHTSEFIEKLEKELEEYHKYVARHKKKK 326

[Close]

BLAST of ClCG09G015320 vs. TAIR10
Match: AT2G28480.1 (AT2G28480.1 RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 230.3 bits (586), Expect = 2.9e-60
Identity = 122/221 (55.20%), Postives = 152/221 (68.78%), Query Frame = 1


Query: 190 LKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRK 249
           LK K+  + +    A   + R   +K KKKK   N E RI+Y LEKAK KEA LIE+L++
Sbjct: 90  LKLKRKKEREERNAANRKDPRRLTVKGKKKKFV-NAEERIKYKLEKAKIKEALLIERLKR 149

Query: 250 FEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETV 309
           +EV K    +  P  +T EE+ YLK+ G+K+ NYV +GRRGVFGGV+LNMHLHWKKHETV
Sbjct: 150 YEVAKVQGPEVRPHEITGEERFYLKKMGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETV 209

Query: 310 KVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDK 369
           KVIC   KPGQV +YAEELA+LS G+ ++I  +++II YRGK YVQP+VMSP DTLSK +
Sbjct: 210 KVICNNSKPGQVQQYAEELAKLSGGVPVNIIGDDTIIFYRGKGYVQPQVMSPIDTLSKKR 269

Query: 370 ALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKKRKGR 411
           A EK KYEQSLE    FI   EKELE + +H+A +     R
Sbjct: 270 AYEKSKYEQSLESVRHFIAIAEKELELYYRHVALYDDPNNR 309

[Close]

BLAST of ClCG09G015320 vs. TAIR10
Match: AT3G25440.1 (AT3G25440.1 RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 186.0 bits (471), Expect = 6.2e-47
Identity = 102/218 (46.79%), Postives = 139/218 (63.76%), Query Frame = 1


Query: 183 SSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAW 242
           SS +G    + K  K K  K+A +  L+ +R K KK+      E +I   L KA++KE  
Sbjct: 96  SSQDGDSCTKLKRKKLK-GKRAVVRWLKFFRWKKKKEFERMTSEEKILNKLRKARKKEER 155

Query: 243 LIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLH 302
           L+E ++K E  +S    +DPEILT EE  Y  + G K KNYV +GRRG++ GV+LNMHLH
Sbjct: 156 LMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLH 215

Query: 303 WKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQP--EVMS 362
           WKKH+T++V+ K   P +V E A ELARL+ GIV+D+   N+II+YRGKNYVQP  E+MS
Sbjct: 216 WKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMS 275

Query: 363 PPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQ 399
           P  TL + KAL+K K   +L    ++I +LE+EL+  Q
Sbjct: 276 PRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQ 312

[Close]

BLAST of ClCG09G015320 vs. TAIR10
Match: AT3G27550.1 (AT3G27550.1 RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 169.1 bits (427), Expect = 7.9e-42
Identity = 92/212 (43.40%), Postives = 136/212 (64.15%), Query Frame = 1


Query: 183 SSSNGSPLKQKKVAKTKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAW 242
           S+S G  ++ K  ++ +      L E+R  R K  KKK   + E R+ Y+L++AK+K A 
Sbjct: 13  STSRGRSMRSKVESRMRKESGKTLREIR--RAKKLKKKLMTDEE-RLIYNLKRAKKKVAL 72

Query: 243 LIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLH 302
           L++KL+K+++P+     +DPE+ T E+    K+ G K KNYV +G RGVFGGVV NMH+H
Sbjct: 73  LLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMH 132

Query: 303 WKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPP 362
           WK HETV+V C      ++ E A  +ARLS G+VI+I    +II++RG+NY QP+ + P 
Sbjct: 133 WKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLIPV 192

Query: 363 DTLSKDKALEKYKYEQSLEHTSQFIEKLEKEL 395
           +TL+K KAL K ++EQ+LE     I+K E++L
Sbjct: 193 NTLTKRKALFKARFEQALESQKLNIKKTEQQL 221

[Close]

BLAST of ClCG09G015320 vs. TAIR10
Match: AT3G01370.1 (AT3G01370.1 CRM family member 2)

HSP 1 Score: 114.8 bits (286), Expect = 1.8e-25
Identity = 71/232 (30.60%), Postives = 121/232 (52.16%), Query Frame = 1


Query: 180 GEPSSSNGSPLKQKKVAKT-KFSKKAKLNELRLYRLKAKKKKTSP----NPEVRIRYSLE 239
           G   + N   +K + V +  +   K + + ++ +++K++++ +         +++  +LE
Sbjct: 492 GNKLTENEEEIKPRAVKEDIELEAKDQKDHIQTHQMKSRQRNSPEAILEKTSMKLSMALE 551

Query: 240 KAKRKEAWLIEKLRKFEVPKSVIEKYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGG 299
           K    E  L + L   E P+  +   D E +T +EK+ L++ G K K ++LLGRRGVF G
Sbjct: 552 KKANAEKVLAD-LENRESPQ--LSDIDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDG 611

Query: 300 VVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIK---PNNSIILYRGK 359
            + NMHLHWK  E VK+IC        H+ AE L   S GI++ ++      +II+YRGK
Sbjct: 612 TIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRGK 671

Query: 360 NYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQ 404
           NY +P+ + P   LSK +AL++    Q  +     + KL   +E+  + L +
Sbjct: 672 NYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVE 720

[Close]

BLAST of ClCG09G015320 vs. NCBI nr
Match: gi|659110425|ref|XP_008455218.1| (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucumis melo])

HSP 1 Score: 582.4 bits (1500), Expect = 8.5e-163
Identity = 289/329 (87.84%), Postives = 304/329 (92.40%), Query Frame = 1


Query: 80  RDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLF 139
           R SLFGF SLIRN S LSLL++P SFGQSS+GSCEHQ S+R VKSL EST   CP G   
Sbjct: 14  RGSLFGFTSLIRNASPLSLLSVPTSFGQSSHGSCEHQASSRIVKSLNESTSRDCPPGSSL 73

Query: 140 TRRYSMWESFSGFKKWQSVRYFSNAAVELKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTK 199
           T RYSMWES+ GFK+WQSVR+FSNA VELKTD N VRFSFG PSS+NGS LKQKKVAKTK
Sbjct: 74  TWRYSMWESYGGFKRWQSVRHFSNAVVELKTDSNTVRFSFG-PSSTNGSQLKQKKVAKTK 133

Query: 200 FSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEK 259
            SKK KLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFE+PKSV+EK
Sbjct: 134 LSKKDKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEIPKSVVEK 193

Query: 260 YDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPG 319
           YDPEILTEEEKHYLKRTGEKKKN+VLLGRRGVFGGVVLNMH+HWKKHETVKVICKPCKPG
Sbjct: 194 YDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPG 253

Query: 320 QVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQS 379
           QVHEYAEEL+RLSKGIVIDIKPNNSII YRGKNYVQPEVMSPPDTLSKDKALEKY+YEQS
Sbjct: 254 QVHEYAEELSRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQS 313

Query: 380 LEHTSQFIEKLEKELEDFQKHLAQFKKRK 409
           LEHTSQFIEKLEKELEDFQKHLAQFK+RK
Sbjct: 314 LEHTSQFIEKLEKELEDFQKHLAQFKRRK 341

[Close]

BLAST of ClCG09G015320 vs. NCBI nr
Match: gi|778724321|ref|XP_011658783.1| (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucumis sativus])

HSP 1 Score: 567.0 bits (1460), Expect = 3.7e-158
Identity = 291/338 (86.09%), Postives = 303/338 (89.64%), Query Frame = 1


Query: 80  RDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLF 139
           R SLFGFI LIRNVS LSLL+IP SF QSS+GS EHQ S+  VKSL ES    CP GF F
Sbjct: 14  RGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLNESMSRDCPPGFSF 73

Query: 140 TRRYSMWESFSGFKKWQSVRYFSNAAVELKTDCNIVRFSFGEPSSSNGSPLKQKKVAKTK 199
           TRRYSM ES  GFK+WQSVR+FSNA VELKTD N VRFSFG PSS+NGS LKQK VAKTK
Sbjct: 74  TRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTNGSRLKQK-VAKTK 133

Query: 200 FSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEK 259
            SKKAKLNELR YRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFE+PK  +EK
Sbjct: 134 MSKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEIPKPFVEK 193

Query: 260 YDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPG 319
           YDPEILTEEEKHYLKRTGEKKKN+VLLGRRGVFGGVVLNMH+HWKKHETVKVICKPCKPG
Sbjct: 194 YDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKPG 253

Query: 320 QVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQS 379
           QVHEYAEEL RLSKGIVIDIKPNNSII YRGKNYVQPEVMSPP+TLSKDKALEKYKYEQS
Sbjct: 254 QVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLSKDKALEKYKYEQS 313

Query: 380 LEHTSQFIEKLEKELEDFQKHLAQFKKRK-GRCLESMV 417
           LEHTSQFIEKLEKELEDFQKHLAQFK+RK    LESMV
Sbjct: 314 LEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAALESMV 350

[Close]

BLAST of ClCG09G015320 vs. NCBI nr
Match: gi|802542415|ref|XP_012081307.1| (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Jatropha curcas])

HSP 1 Score: 431.4 bits (1108), Expect = 2.4e-117
Identity = 223/322 (69.25%), Postives = 253/322 (78.57%), Query Frame = 1


Query: 88  SLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLFTRRYSMWE 147
           SL +  S   LLN   S    SY         R V    E+  +  P+ FL T+R +++ 
Sbjct: 40  SLHKATSVTPLLNWTTSVNLRSY---------RAVIPFLEAVRVSSPN-FLLTQRLNVFA 99

Query: 148 SFSGFKKWQSVRYFSNAAVELKTDCNIVRFSFGEPSSSNGSPLKQKKVAK-TKFSKKAKL 207
           S S  + W   R+ S A+ ELKTD ++VRF+FG+    NGS  K+KK  K  K S+KAKL
Sbjct: 100 SHSVLRSWVYRRWMSRASFELKTDNDVVRFAFGKQPGKNGSSEKRKKTTKRVKMSRKAKL 159

Query: 208 NELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIEKYDPEILT 267
           NELR YRLKAKKKK SPNPEVRIRY LEKAKRKE WLIEKLRKFEVPK   E YDPEILT
Sbjct: 160 NELRFYRLKAKKKKNSPNPEVRIRYKLEKAKRKEVWLIEKLRKFEVPKIPAEVYDPEILT 219

Query: 268 EEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAE 327
           EEEKHYLKRTGEKKKN+VL+GRRGVFGGVVLNMHLHWKKHETVKVIC+PCKPGQ+HEYAE
Sbjct: 220 EEEKHYLKRTGEKKKNFVLVGRRGVFGGVVLNMHLHWKKHETVKVICRPCKPGQIHEYAE 279

Query: 328 ELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQF 387
           ELARLSKGIVIDIKPNNSI+ YRGKNYVQPEVMSPP+TLSK KALEKYKYEQSLEHTSQF
Sbjct: 280 ELARLSKGIVIDIKPNNSIVFYRGKNYVQPEVMSPPNTLSKQKALEKYKYEQSLEHTSQF 339

Query: 388 IEKLEKELEDFQKHLAQFKKRK 409
           IEKLEKELE++ +H+A+++K K
Sbjct: 340 IEKLEKELEEYLEHVARYRKLK 351

[Close]

BLAST of ClCG09G015320 vs. NCBI nr
Match: gi|1009151157|ref|XP_015893402.1| (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic isoform X1 [Ziziphus jujuba])

HSP 1 Score: 425.6 bits (1093), Expect = 1.3e-115
Identity = 224/332 (67.47%), Postives = 255/332 (76.81%), Query Frame = 1


Query: 80  RDSLFGFISLIRNVSHLSLLNIPASFGQSSYG--SCEHQISNRTVKSLQESTYIHCPSGF 139
           RDSL  F  L   VS +SL    A+F + +    +C H+ S    + L E  Y      F
Sbjct: 20  RDSLVPFCRLAHKVSDISL---SATFFRRTLACIACMHKQSYSVSRPLLEVPYAISALDF 79

Query: 140 LFTRRYSMWESFSGFKKWQSVRYFSNAAVELKTDCNIVRFSFGEPSSSNGSPLKQKKVAK 199
              +R +M  + S F+KW   RY SN +V+LKTD NI++FS G     NGS  K KK  K
Sbjct: 80  SLVQRRNMLVAQSNFRKWIFSRYNSNTSVQLKTDSNIIKFSIG---IHNGSSPKGKKTTK 139

Query: 200 -TKFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSV 259
             K SKKAKLNELR YRLKAKKK  SPNPEVRIRY LEKAKRKE WLIEKLRKFE+ K+ 
Sbjct: 140 QVKMSKKAKLNELRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKETWLIEKLRKFEISKAP 199

Query: 260 IEKYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPC 319
            E YDPEILTEEEKHYLKRTGEKKK+YV +GRRGVFGGVVLNMHLHWK HETVKVIC+PC
Sbjct: 200 AETYDPEILTEEEKHYLKRTGEKKKHYVPVGRRGVFGGVVLNMHLHWKNHETVKVICRPC 259

Query: 320 KPGQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKALEKYKY 379
           KPGQ+HEYAEELARLSKGIVIDIKPNN+II YRGKNYVQPE+MSPP+TLSK+KALEKYKY
Sbjct: 260 KPGQIHEYAEELARLSKGIVIDIKPNNTIIFYRGKNYVQPEMMSPPETLSKNKALEKYKY 319

Query: 380 EQSLEHTSQFIEKLEKELEDFQKHLAQFKKRK 409
            QSLEHTSQFIEKLEKELE++ +HLA++K+ K
Sbjct: 320 LQSLEHTSQFIEKLEKELEEYHRHLARYKQGK 345

[Close]

BLAST of ClCG09G015320 vs. NCBI nr
Match: gi|731405604|ref|XP_010655847.1| (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Vitis vinifera])

HSP 1 Score: 420.2 bits (1079), Expect = 5.6e-114
Identity = 218/330 (66.06%), Postives = 251/330 (76.06%), Query Frame = 1


Query: 80  RDSLFGFISLIRNVSHLSLLNIPASFGQSSYGSCEHQISNRTVKSLQESTYIHCPSGFLF 139
           R SL G   L++NVS LS L   A+   +   S   Q+  R+ K +     +  P   L 
Sbjct: 3   RHSLAGCCFLVKNVSKLSSLYKAATNSSTFMLSHVMQMHPRSYK-VAAGECVWSPCNTLL 62

Query: 140 TRRYSMWESFSGFKKWQSVRYFSNAAVELKTDCNIVRFSFGEPSSSNGSPLK-QKKVAKT 199
               +M        KW   RY SN ++ELK D ++VRF+ GE     G+  K +KK+ + 
Sbjct: 63  WHGSNMVGCGDALSKWARARYMSNTSIELKPDSDVVRFNIGELPGKTGTSKKGKKKMRRV 122

Query: 200 KFSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVIE 259
           K S+KAKLNELR YRLKAKKK TSPNPEVRIRY LEKAKRKE WLIEKLRKF++PK+  E
Sbjct: 123 KMSRKAKLNELRFYRLKAKKKMTSPNPEVRIRYKLEKAKRKEEWLIEKLRKFDIPKAPTE 182

Query: 260 KYDPEILTEEEKHYLKRTGEKKKNYVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKP 319
            YDPEILTEEEK YLKRTGEKKKNYV +GRRGVFGGVVLNMHLHWKKHETVKVICKPCK 
Sbjct: 183 AYDPEILTEEEKFYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVICKPCKV 242

Query: 320 GQVHEYAEELARLSKGIVIDIKPNNSIILYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQ 379
           GQV+EYAEELARLSKGI+IDIKPNN+II YRGKNYVQP+VMSPPDTLSK KALEKY+YEQ
Sbjct: 243 GQVYEYAEELARLSKGIMIDIKPNNTIIFYRGKNYVQPQVMSPPDTLSKSKALEKYRYEQ 302

Query: 380 SLEHTSQFIEKLEKELEDFQKHLAQFKKRK 409
           SLEHTSQFIEKLE ELE++ KHLAQ++K+K
Sbjct: 303 SLEHTSQFIEKLENELEEYHKHLAQYRKQK 331

The following BLAST results are available for this feature:

BLAST of ClCG09G015320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y3544_ARATH	1.1e-45	46.79	Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabid...	[more]
CFM2_ARATH	3.1e-24	30.60	CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana GN=CFM2...	[more]
CFM3A_ARATH	2.7e-20	35.14	CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis t...	[more]
CFM3_ORYSJ	3.6e-20	33.52	CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa s...	[more]
CFM3_MAIZE	4.7e-20	34.64	CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays GN=CF...	[more]

BLAST of ClCG09G015320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5Y2_CUCSA	2.6e-158	86.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G062730 PE=4 SV=1	[more]
A0A067LDM8_JATCU	1.7e-117	69.25	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09572 PE=4 SV=1	[more]
K7KRJ8_SOYBN	8.6e-114	65.76	Uncharacterized protein OS=Glycine max GN=GLYMA_05G236500 PE=4 SV=1	[more]
K7L4Y2_SOYBN	4.3e-113	65.45	Uncharacterized protein OS=Glycine max GN=GLYMA_08G043700 PE=4 SV=1	[more]
A0A0B2Q5J0_GLYSO	4.3e-113	65.45	Putative CRM domain-containing protein, chloroplastic OS=Glycine soja GN=glysoja...	[more]

BLAST of ClCG09G015320 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G13070.1	3.2e-112	70.92	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT2G28480.1	2.9e-60	55.20	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G25440.1	6.2e-47	46.79	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G27550.1	7.9e-42	43.40	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G01370.1	1.8e-25	30.60	CRM family member 2	[more]

BLAST of ClCG09G015320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110425\|ref\|XP_008455218.1\|	8.5e-163	87.84	PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplasti...	[more]
gi\|778724321\|ref\|XP_011658783.1\|	3.7e-158	86.09	PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplasti...	[more]
gi\|802542415\|ref\|XP_012081307.1\|	2.4e-117	69.25	PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplasti...	[more]
gi\|1009151157\|ref\|XP_015893402.1\|	1.3e-115	67.47	PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplasti...	[more]
gi\|731405604\|ref\|XP_010655847.1\|	5.6e-114	66.06	PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplasti...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001890	RNA-binding_CRM

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G015320.1	ClCG09G015320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001890	RNA-binding, CRM domain	GENE3D	G3DSA:3.30.110.60		coord: 265..359 score: 4.0
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 265..349 score: 3.9
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 265..349 score: 1.0
IPR001890	RNA-binding, CRM domain	PROFILE	PS51295	CRM	coord: 263..360 score: 19
IPR001890	RNA-binding, CRM domain	unknown	SSF75471	YhbY-like	coord: 264..359 score: 1.96
None	No IPR available	unknown	Coil	Coil	coord: 380..407 scor
None	No IPR available	PANTHER	PTHR31426	FAMILY NOT NAMED	coord: 135..416 score: 1.3E
None	No IPR available	PANTHER	PTHR31426:SF3	SUBFAMILY NOT NAMED	coord: 135..416 score: 1.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG09G015320	Csa7G062730	Cucumber (Chinese Long) v2	cuwcgB514
ClCG09G015320	MELO3C018653	Melon (DHL92) v3.5.1	mewcgB176
ClCG09G015320	Cla001845	Watermelon (97103) v1	wcgwmB014
ClCG09G015320	Cla97C09G177310	Watermelon (97103) v2	wcgwmbB035
ClCG09G015320	Bhi05G000689	Wax gourd	wcgwgoB033
ClCG09G015320	CSPI07G05440	Wild cucumber (PI 183967)	cpiwcgB541
ClCG09G015320	Cucsa.217840	Cucumber (Gy14) v1	cgywcgB391
ClCG09G015320	CmaCh19G002610	Cucurbita maxima (Rimu)	cmawcgB444
ClCG09G015320	CmoCh19G002820	Cucurbita moschata (Rifu)	cmowcgB445
ClCG09G015320	Lsi03G007720	Bottle gourd (USVL1VR-Ls)	lsiwcgB215
ClCG09G015320	Cp4.1LG15g02330	Cucurbita pepo (Zucchini)	cpewcgB221
ClCG09G015320	MELO3C018653.2	Melon (DHL92) v3.6.1	medwcgB171
ClCG09G015320	Carg24503	Silver-seed gourd	carwcgB0947
ClCG09G015320	CsaV3_7G006390	Cucumber (Chinese Long) v3	cucwcgB535

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG09G015320	Cucurbita pepo (Zucchini)	cpewcgB578
ClCG09G015320	Cucumber (Gy14) v2	cgybwcgB473
ClCG09G015320	Cucurbita maxima (Rimu)	cmawcgB075
ClCG09G015320	Cucurbita moschata (Rifu)	cmowcgB072