Cp4.1LG15g02330 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG15g02330
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	CRS1 / YhbY (CRM) domain-containing protein
Location	Cp4.1LG15 : 2131735 .. 2139124 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTAGCGCTGATTCCATCTCTTTCTTTCTCGCATTCAAGCTCTAAATTTCGTCATAGAACATTACTTTTAGAAACTAGGTCAAATTTGATTAGGGCAAAAATACTTGGGTGAATTCCTCAAAATTTTCCATAATTCGAGCGCTACAAAGGCACAGTTTCATCTTGAGTTTGCAAATTTGCCAGTTTAGCAGATTTTCCCTGAATCCTCAATTCCCCCCATAGCTAGCAAATTGTTGATGATGAACCAGTCCAGCCATTTTCAACTCTGGGGGTTGTTGTGGATTCCCCCCCTTTCATCTTATTTCTGCAGTGAACGAACAATCTGCTAGGGATTGATTGATTGATTGATTGATTGATTTAGGACCATGTCTCGCGGTCATGCTCTATCCATTGCCATTTCAAGGTACTTTCTCCATCTCCATAAATCTCATGGGTTTCATTCAAAAGTTCTGGAATCGAATACATTTTCATGCTTATCAACTTAGCCCTAGTGAAATATATTAGTTCATCTCGTAACAGAGGGTCTCTGCTTGTTGAAATCTGTTGTACTCATTATTTAGCATTATAATAGAACATCATTTAAGGAAGATTTCAGGTTGTCTATGAGATTTTACTTCGGAGATATATGGAATTGGATGATTATGGTGTGATATTTATGCAGGGATTCATTATATGGATTCATTTCTATGATTAGAAATGTTTCACGTCTATCTTTATTCAACATATCCACATCATTTGGGCAGTCCTCATATGGAAGTTGTGAGTATCAAATAAGTAATTGTATATCGAAGTCTCTCCAGGAATCGACGTCTATACGCTATCTGCCTGGCTTCTTTTTCGCTAAGCGATATAGTATGTGTGAGAGCCTTGGTGGGTTTGAAAAATGGCAATCTGTTAGGCACTTTAGCAATGGGGCTGTGGAGCTGAAGACAGACAGCAATATTGTCAGGTTTTCTTTTGGTGGGTCTTCTAGTACTAACGGTTCCCCACGGAAACAAAAGAAGGTGGCAAAAGCCAAATTGTCTAAGAAGGCCAAATTGAATGAACTCAGGCTCTATCGTCTTAAGGCGAAAAAGAAGAAGACGTCTCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGTTGGATACCATCTATAATTTATAGTTATACTAACAGCTTTTAATTGATTGCTAGTCTTCCTCTATAGAAACGTGTGCCACAATCTTCTTGTAAGAGGAGTATTCGATTTCAATACTTACTTTTAATCTTTTTATCCATATATAATATGTTTGTTACCGGTATGAAGGTGACTGAGGTTTGATTAGCATTTCTTTGTGTAGTTGTGTGCATGTGATAAAATGCCTAATGTGAGATCCCACATCAGTTGGGGAGGAGAACGAAGCACCCTTTATAAGGATGTAGAAACCTCTCTCTAGCAGACGCGTTTTAAAAACCTTAAGGGGAAGTCCGAAAGGGAAAGCCCAAAGAGGACAATATATGCTAGCAGGGGCTTGGACCGTTACGAATGGTATCAAAGCCAGACACCGGGCGATGTGCCAGCGAGGAGGCTAAGCCTCGAAGAGGGTGGACACGAGGAGGTGTGCTAGCAAGGACGCTGGGCCCCGAGGGAGGGAGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACAAAGCACCCTTTATAAGGGTGTGGGAACCTCTCTCTAGCAGATGCATTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCCTAAAGGGGATAATATCTGCTAGCGGTGGGCTTGGGCTGTTACAGCTAATAACCACTTTTTCTCTAACTTCTTCTGCTTGACACGTTTGTACAACTGTGAAAGTTTATTCTGTGTATCGACCATGTATGACTAATAATCCATAATATTCAGTAATTGTCGTCAAAATTTAACTTAAAGTTTCATGTAAAATCGTTTCTTTTCAATAAGAATCGTTTATATTAAACAAAAATAAGTATTTCATACAAAAATTTCAAAGCAAGCGCCAAGAAGAAAAACATTTTATGTGATTTTTATACCTTCAACACAATGTAAGTGAATTTCAAAGGTTCTGTTGAATTTTGCATTAATATGTAGGACTAATTGAACTCTCTTGGACCTCCTAGTGATCATTTGTTCTTATGAACCATGAAGTTGTTTAATCTTATAATGTCTTGAAGGATCCAATGATATATGTAGGCCAAAAGGAAAGAAGCGTGGCTGATTGAGAAGTTGAGGAAATTCGAGGTTCCAAAATCTGTTCTTGAAACTTATGATCCTGAAATTCTTACTGAAGAGGAGAAGCACTACTTGAAGCGTACAGGGGAGAAAAAGAAGAACTTTGTTCTGTTGGGGAGGCGAGGAGTCTTTGGTGGAGTTGTTCTTAATATGCATTTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAACCTGGGCAGGTTCATGAATATGCTGAAGAACTTGCTCGGTTGAGTAAAGGCATTGTGATTGATATTAAACCCAACAACAGCATAGTCTTTTATCGGGGAAAGAACTATGTGCGGCCTGAAGTAATGTCGCCTCCAGATACGCTATCGAAAAACAAGGTAAGCTCAGCTCATTCCTGAAAACTGAAATGATCAAAGAAAATAGATTTAATTGATTAGTGTTGAAATTACAATGGCAAATTAACCTAATCTGCAGAATTTATTTCATAAGTAGCAGCACCACCCTCCACACACACACACTCTGCAGAGGTTTGTTAATATTTACTCTTATGCATATGAAGTTTTTAGTTTTATATGTTCTATAGAAACTTATGCATATGAAATTTGTAGTTTTTACAATAATTACTTTGTGAATATGTTATTTGTAAGCTTATAGAACCTCATGTTATTTATGGACGAGAATGAACATTCCCAGGGAGGTTGTGAGAGCTCCTGCCTCCTGCCTCTCCGATGCGGATCTGTTCACAAAATGCCAAAAGATGATCCCTCTCTCGCTACCCTGTATATACTAGACTCTCTCCCGGGCCTTGCTGGTCATGAAACTAGCTCAAGGGGCCCACACGCGCAAAATACTCTCTTTTGTGCTCTCCCTCTCTTACCTTTTTCTCTTATATACATTTTTTATAGGGGTCTATATGAGGTCCCACATCGGTTGGAGAGAAGGACGAAGCATTCCTTATAAGAGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAACCGTGAGGCTGACAGCGATGCATAACGGGCCAAAGTGAATAATATCTGCTAGCGGTGGGTTTGAGTTGTTACAAATGGTATCAGAGCCAGACACCGGATGGTGTGCTAGCGAGAACGCTGGGCCGTAAGGGGGTTGGATTGTGAGGTCCCACGTCAGTTGGAGAGGAGAACGAAGCATTCCCTATAAAGGTGTGGAAACCTCTCCTTAGCAGACGTGTTTTAATACCGTGAGGCTAATGGCGATATATAACGGGTTAAAGCGGATAATATCTGCTTGCAGTGGGTTTGGGGTGTTACAGTCTACTATAAACTTTTTGAATAAAAGCGTAGATTCTGCACCTCTTCTACTATTTTATTTCATGCCCATCTTTGTATCTTGCTTTTCTGCATCTAAAGAAACGTTTGTGCCTTCTTTATACCTTCCGGCTCAAAGATCACCCAAGATACTTTCCATACCTGCTTCAAACCCAAGTTTTGGACTATGTAAAGTAGTAAGATTACCTTTCTAACGAAGTTTCTAATGGTTCGAGTTCAGTTTATTGTAACCAAGTGTTCGGCTATTTGGTTAGAAAGGAATAGATCACTTTTTTAGAAAAAGGCTCCAATAGGTTGGATTGTTCAAATTCAGTCGATGGCTTCACTAGTTCACTTTGACCTTCTATCCCAAAATTTTATGTTTTGTTCTTAGACAGTCCTTTTTTACCCCTTCTTCTACATCATAACAGCTTTAAACAAGCAACATAACTTTTCGCATGTAAAATCTTGCAGGCCTTGGAAAAATATAAGTATGAACAATCACTTGAACATACAAGTCAGTTCATTGAAAAGTTGGAGAAAGAACTTGAAGATTTTCAGAAGCATCTTGCTCAGTTCAAGAGAAAGAAGGAAGAGGCTGCTGTAGAATTCATGGTTAACTCATGACTGGTAATATCTCTTTTTTACTTATCATTTCCTAGTCAATTATTGTCGTAGTTGGTTCTTGCCAAACATAAATGTTGTTTGAATAAGTTGTTCAACAATCTAAAGCCATTGTTGTAACAATCTAAACTGTTGTGGTATGATGCAGCTACTCATTCACCCTATTTATTGAACCTTATTAGCACTGAAAAGGTGAAAATAGGCACAGACTGCTTTTTACAAACTGGTTCTTCTTACTACAACTGCTTGTATGCAAGTAGCTATAAAGCCTATTTGAAGTTTATGGGGTCATGCAATGATACAATCGGGAAATTATGGAGCTAGCTCTATTTCAACTTCAAATTGAAAAATAGCCACAAGTTTCATATATGTGAGATCCAACATCGGTTGTGGAGGAGAACGAAACATTCTTTAAAAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTAAAAACCTTGAGGAGAAGCCCGAAAGGAAAAACCTAAAGAGGACAATATCTGCTAACGGGGGGTTTAGGCCATTACAAATGGTATCAGAGCCAGATATCGGGTGATGTGCCAACGAGGAGGCTGAGTCCCGAAGGGGGTGGACACGAGGTGGTGTGCCAGTAAGGACGCTGGGCCTTGAAGGGGGATGGATTAGGGGAGAGTCCCACATCGGTTGGAGAAGGGAATGAGTGTCAACGTAGACGTTAGGCTCCAAAGGGGGGTGGATTGTGAGATCCCACGTCGGTTGGGGAGGAGAATGAAACATTCTTTAAAAAATGGTGTGTAAACCTCTTTTTAACAGACGCGTTTTAAAAACCTTGAGGGGAAGCCCAAGGAGGACAATATCTGCTAGCGGTAGGCTTGGGCCGTTACAATATATCTCCAATATGGCTGACTAAATTTTGAAGGAAACGATTTTTATTTGTTTTTATCAATTTTGCCCCTCATCTTGTTTTAGATATTTCCTAAATCTTTTGACATTAAATCTTGCTAGATTGTTGAGAGATTTGATTAGTTTATGTTTCTTAAACAAACATTTATTGAGGTTTTGATTTGAAGTGCTCCAACTCTGTTCTTCAATTAAATGAACCATTCTATGAATATTTGCATGTGCTATATGTCAGATTAGGAGCGTGCCACCACTTGTCTTGTGCGATAGGCTATTTTAAAGCAGTGGCTTAACATTTTCCACCATAAATGATGACGCTCAAAGAGATGGTGCACATAGACCCTTCGACAGAAGTGTGAATGATGAAGACATAAAGGTACTTATTCATGTGGGTTAAAAAAATTTGTATAAATGATAGTTTACTTGGTTCCCCTTTCTTTTATTTTTTTTATGCATTCCCTCTGTTTACTTAAATATTTTTCCACATGTTTGTTTAAAAATAAAATTGTAACGGCCCAAGCCTACCGCTAGTAGGTATTGTCCTCTTTGGGCTTGCTCTTTCGAGCTTCCCCTTAAGGTTTTTAAAACGCGTCTGCTAGGGAAAGGTTTCCACACTCTTATAAAGAATGCTTTGTTCTCCTCTCCAACCGATGTGGGGATCTCACCTTCGAGGCTCAGCGTTCTTGCTAGCACACCGCCTCATATCCCCACCCCCCTTCGGGGCTTAGCCTCCTTGCTAGTACATCGCCCAGTGTCTAGTTCTGATACCATTTGTAACGGCCCAAGCCTACCGCTAGCAGATATTGTCATCTTTGGACTTTCACTTTCGTGCTTCCCTTCAAGGTTTTTAAAACGCATCTGCCACCCTTATAAAGAATGTTTTGTTCTCCTCCTCAACCGACGTGGGATCTCACAATCCACCCCCCTTCAAGGCCTAGCGTCCTCGCTGACACTTGTTCCTTTCTCCAATCAATGTGGAACCTCCCAATCCACCCCCTCCCCCCCAGTGTCCTTGCTGGGCACACCACCTCGTATCCACTCCTTTCGGGGTTCAGCCTCCTTGCTGGCACTTTATCTGGTGTCTGCCTCTAATATCCTTTGTAACAGCCTAAATATTGTCCTCTTTAGTCTTTCCCTCCCCCCCACCCCAGTGTCCTTGCTGGGCACACCACCTCGTATCCACTCCTTTCGGGGTTCAGCCTCCTTGCTGGCACTTTATCTGGTGTCTGCCTCTAATATCCTTTGTAACAGCCTAAATATTGTCCTCTTTAGTCTTTCCCTCCCCCCCACCCCAGTGTCCTTGCTGGGCACACCACCTCGTATCCACTCCTTTCGGGGTTCAGCCTCCTTGCTGACACTTTATCTGGTGTCTGCCTCTAATATCATTTGTAACAGCCTAAATATTGTCCTCTTTAGTCTTTCCCTTTCGAGCTTCCCCTCAAGACTTTTAAAACACTAGGTAAAGGTTTCCACGCCCTTATAAAGAATATATCATTCTCCTCCCTAACCGACGGAATCTCACAAAAATGATATCCATTTTTAAAAACATATCCCCTTTAAGGATGTCAATCGCTCCATGTTACAAGCAAATGATGTTAGTTTGAAGACTCTACTTGCGACATGAGATTTCAGCCATTTTTGTTGACTTAGATTTTTGTTCTTTGTGTTTAATATTCTTTGATTGTATATCTTGCTTGTTTTATTTTATTTCACATACCATCACAAAGCCTCCTACCCAGGCTGTACCCAATATGATTAGAATCGAGCACGGAGTAATGTCTCGACCTTCAAAAAATGTATGTTTTTGTGCAGGCACACTTAAAATCCTCACCGAGTTTGGTCATAGGATTGCGGTCGAGAAGTTTATGTTTTTGCGTGGATGAACGAAAGATCCTCATTCAATTTTGTTATATAATCATGTATGACTATGTGACCATTTTGTGAGCATTGTCATTTAGGACTTCAGAATTATTCTTACTTGTTCGGAGCTTTTATGCTATTGATTTGATTGTTTTACATTTAATGTACAATCATTTGTGTTCTCATCTTGCATTACATGTAAGTTAGCGCTTAGAGTCATTTTCTTTATGAAGGGAAGTCTTAGAATGGTAGATACCCCTATGCCTACACGAGGAAGATATGAGAACCCCATCTCGTTCGTGTGTTAGAGTAGATTTTGTTCGCAACCATGCTGAAGATTTGCGAGTTTCATGGGAGAATTTGAATCCAAAGTACAAAGCGGAAATTGCATACGTCAGGGAATAGCAGTGACACGGTTGTATGTTTCCAATTGTGTGGGGTTATGATTTTAGCATACTCATGACAAACATTAAAGAAAGCTCAAGCCCTATTCACATTTTTTCGCCGACTT

mRNA sequence

TCTAGCGCTGATTCCATCTCTTTCTTTCTCGCATTCAAGCTCTAAATTTCGTCATAGAACATTACTTTTAGAAACTAGGTCAAATTTGATTAGGGCAAAAATACTTGGGTGAATTCCTCAAAATTTTCCATAATTCGAGCGCTACAAAGGCACAGTTTCATCTTGAGTTTGCAAATTTGCCAGTTTAGCAGATTTTCCCTGAATCCTCAATTCCCCCCATAGCTAGCAAATTGTTGATGATGAACCAGTCCAGCCATTTTCAACTCTGGGGGTTGTTGTGGATTCCCCCCCTTTCATCTTATTTCTGCAGTGAACGAACAATCTGCTAGGGATTGATTGATTGATTGATTGATTGATTTAGGACCATGTCTCGCGGTCATGCTCTATCCATTGCCATTTCAAGGGATTCATTATATGGATTCATTTCTATGATTAGAAATGTTTCACGTCTATCTTTATTCAACATATCCACATCATTTGGGCAGTCCTCATATGGAAGTTGTGAGTATCAAATAAGTAATTGTATATCGAAGTCTCTCCAGGAATCGACGTCTATACGCTATCTGCCTGGCTTCTTTTTCGCTAAGCGATATAGTATGTGTGAGAGCCTTGGTGGGTTTGAAAAATGGCAATCTGTTAGGCACTTTAGCAATGGGGCTGTGGAGCTGAAGACAGACAGCAATATTGTCAGGTTTTCTTTTGGTGGGTCTTCTAGTACTAACGGTTCCCCACGGAAACAAAAGAAGGTGGCAAAAGCCAAATTGTCTAAGAAGGCCAAATTGAATGAACTCAGGCTCTATCGTCTTAAGGCGAAAAAGAAGAAGACGTCTCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGCCAAAAGGAAAGAAGCGTGGCTGATTGAGAAGTTGAGGAAATTCGAGGTTCCAAAATCTGTTCTTGAAACTTATGATCCTGAAATTCTTACTGAAGAGGAGAAGCACTACTTGAAGCGTACAGGGGAGAAAAAGAAGAACTTTGTTCTGTTGGGGAGGCGAGGAGTCTTTGGTGGAGTTGTTCTTAATATGCATTTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAACCTGGGCAGGTTCATGAATATGCTGAAGAACTTGCTCGGTTGAGTAAAGGCATTGTGATTGATATTAAACCCAACAACAGCATAGTCTTTTATCGGGGAAAGAACTATGTGCGGCCTGAAGTAATGTCGCCTCCAGATACGCTATCGAAAAACAAGGCCTTGGAAAAATATAAGTATGAACAATCACTTGAACATACAAGTCAGTTCATTGAAAAGTTGGAGAAAGAACTTGAAGATTTTCAGAAGCATCTTGCTCAGTTCAAGAGAAAGAAGGAAGAGGCTGCTGTAGAATTCATGGTTAACTCATGACTGATTAGGAGCGTGCCACCACTTGTCTTGTGCGATAGGCTATTTTAAAGCAGTGGCTTAACATTTTCCACCATAAATGATGACGCTCAAAGAGATGGTGCACATAGACCCTTCGACAGAAGTGTGAATGATGAAGACATAAAGGCACACTTAAAATCCTCACCGAGTTTGGTCATAGGATTGCGGTCGAGAAGTTTATGTTTTTGCGTGGATGAACGAAAGATCCTCATTCAATTTTGTTATATAATCATGTATGACTATGTGACCATTTTGTGAGCATTGTCATTTAGGACTTCAGAATTATTCTTACTTGTTCGGAGCTTTTATGCTATTGATTTGATTGTTTTACATTTAATGTACAATCATTTGTGTTCTCATCTTGCATTACATGTAAGTTAGCGCTTAGAGTCATTTTCTTTATGAAGGGAAGTCTTAGAATGGTAGATACCCCTATGCCTACACGAGGAAGATATGAGAACCCCATCTCGTTCGTGTGTTAGAGTAGATTTTGTTCGCAACCATGCTGAAGATTTGCGAGTTTCATGGGAGAATTTGAATCCAAAGTACAAAGCGGAAATTGCATACGTCAGGGAATAGCAGTGACACGGTTGTATGTTTCCAATTGTGTGGGGTTATGATTTTAGCATACTCATGACAAACATTAAAGAAAGCTCAAGCCCTATTCACATTTTTTCGCCGACTT

Coding sequence (CDS)

ATGTCTCGCGGTCATGCTCTATCCATTGCCATTTCAAGGGATTCATTATATGGATTCATTTCTATGATTAGAAATGTTTCACGTCTATCTTTATTCAACATATCCACATCATTTGGGCAGTCCTCATATGGAAGTTGTGAGTATCAAATAAGTAATTGTATATCGAAGTCTCTCCAGGAATCGACGTCTATACGCTATCTGCCTGGCTTCTTTTTCGCTAAGCGATATAGTATGTGTGAGAGCCTTGGTGGGTTTGAAAAATGGCAATCTGTTAGGCACTTTAGCAATGGGGCTGTGGAGCTGAAGACAGACAGCAATATTGTCAGGTTTTCTTTTGGTGGGTCTTCTAGTACTAACGGTTCCCCACGGAAACAAAAGAAGGTGGCAAAAGCCAAATTGTCTAAGAAGGCCAAATTGAATGAACTCAGGCTCTATCGTCTTAAGGCGAAAAAGAAGAAGACGTCTCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGCCAAAAGGAAAGAAGCGTGGCTGATTGAGAAGTTGAGGAAATTCGAGGTTCCAAAATCTGTTCTTGAAACTTATGATCCTGAAATTCTTACTGAAGAGGAGAAGCACTACTTGAAGCGTACAGGGGAGAAAAAGAAGAACTTTGTTCTGTTGGGGAGGCGAGGAGTCTTTGGTGGAGTTGTTCTTAATATGCATTTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAACCTGGGCAGGTTCATGAATATGCTGAAGAACTTGCTCGGTTGAGTAAAGGCATTGTGATTGATATTAAACCCAACAACAGCATAGTCTTTTATCGGGGAAAGAACTATGTGCGGCCTGAAGTAATGTCGCCTCCAGATACGCTATCGAAAAACAAGGCCTTGGAAAAATATAAGTATGAACAATCACTTGAACATACAAGTCAGTTCATTGAAAAGTTGGAGAAAGAACTTGAAGATTTTCAGAAGCATCTTGCTCAGTTCAAGAGAAAGAAGGAAGAGGCTGCTGTAGAATTCATGGTTAACTCATGA

Protein sequence

MSRGHALSIAISRDSLYGFISMIRNVSRLSLFNISTSFGQSSYGSCEYQISNCISKSLQESTSIRYLPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVLETYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVRPEVMSPPDTLSKNKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAAVEFMVNS

Homology

[Close]

BLAST of Cp4.1LG15g02330 vs. Swiss-Prot
Match: Y3544_ARATH (Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana GN=At3g25440 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.5e-40
Identity = 125/330 (37.88%), Postives = 183/330 (55.45%), Query Frame = 1


Query: 22  MIRNVSRLSLFNISTSFGQSSYGSCEYQISNC--ISKSLQESTSIRYLPGFFFAKRYSMC 81
           ++R  SR   F  S+S   SS+ S    IS+C  + K L + +  R +    F +  S  
Sbjct: 18  LLRRKSRQLGFLASSSPLFSSFNSMNRTISSCNIVCKVLHKESLTRPMWNVSFLRSSS-- 77

Query: 82  ESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQKKVAKAKLSKKAKL 141
                   + S      G  ++    N        SSS +G    + K  K K  K+A +
Sbjct: 78  --------FHSTPARETGDDDISKSEN--------SSSQDGDSCTKLKRKKLK-GKRAVV 137

Query: 142 NELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVLETYDPEILT 201
             L+ +R K KK+      E +I   L KA++KE  L+E ++K E  +S   T+DPEILT
Sbjct: 138 RWLKFFRWKKKKEFERMTSEEKILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILT 197

Query: 202 EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAE 261
            EE  Y  + G K KN+V +GRRG++ GV+LNMHLHWKKH+T++V+ K   P +V E A 
Sbjct: 198 PEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAV 257

Query: 262 ELARLSKGIVIDIKPNNSIVFYRGKNYVRP--EVMSPPDTLSKNKALEKYKYEQSLEHTS 321
           ELARL+ GIV+D+   N+I+ YRGKNYV+P  E+MSP  TL + KAL+K K   +L    
Sbjct: 258 ELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVR 317

Query: 322 QFIEKLEKELEDFQKHLAQFKRKKEEAAVE 348
           ++I +LE+EL+  Q   AQ + K++   V+
Sbjct: 318 KYIPRLEQELQLLQ---AQAETKRDYTNVK 325

[Close]

BLAST of Cp4.1LG15g02330 vs. Swiss-Prot
Match: CFM3_ORYSJ (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CFM3 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.3e-20
Identity = 69/191 (36.13%), Postives = 100/191 (52.36%), Query Frame = 1


Query: 161 RIRYSLEKAKRKEAWLIEKLRKFEVPKSVLETYDP-EILTEEEKHYLKRTGEKKKNFVLL 220
           ++ + L+ A++K       L K E      E   P E +T+EE+   ++ G + K F+LL
Sbjct: 554 KLEWKLQLAQKKIEKAERVLGKVETALKPTEGIQPPETITDEERFMFRKLGLRMKAFLLL 613

Query: 221 GRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVID---IKPNN 280
           GRRGVF G + NMHLHWK  E VK++ K    G V + A  L   S GI++    +    
Sbjct: 614 GRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEAESGGILVSVDKVSKGY 673

Query: 281 SIVFYRGKNYVRPEVMSPPDTLSKNKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQ 340
           +IV +RGK+Y RP  + P + LSK KAL +    Q  E  S  I  L + ++  +  L Q
Sbjct: 674 AIVVFRGKDYARPSKLRPRNLLSKRKALARSIEIQRREALSHHIATLNRRVKKLKAELLQ 733

Query: 341 FKRKKEEAAVE 348
            +  KEE  VE
Sbjct: 734 MEGVKEEGDVE 744

[Close]

BLAST of Cp4.1LG15g02330 vs. Swiss-Prot
Match: CFM2_ARATH (CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana GN=CFM2 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.2e-20
Identity = 74/235 (31.49%), Postives = 122/235 (51.91%), Query Frame = 1


Query: 111 SFGGSSSTNGSPRKQKKVAKAKLSKKAK--LNELRLYRLKAKKKKTSP----NPEVRIRY 170
           S  G+  T      + +  K  +  +AK   + ++ +++K++++ +         +++  
Sbjct: 489 SVHGNKLTENEEEIKPRAVKEDIELEAKDQKDHIQTHQMKSRQRNSPEAILEKTSMKLSM 548

Query: 171 SLEKAKRKEAWLIEKLRKFEVPKSVLETYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGV 230
           +LEK    E  L + L   E P+  L   D E +T +EK+ L++ G K K F+LLGRRGV
Sbjct: 549 ALEKKANAEKVLAD-LENRESPQ--LSDIDKEGITNDEKYMLRKIGLKMKPFLLLGRRGV 608

Query: 231 FGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIK---PNNSIVFY 290
           F G + NMHLHWK  E VK+IC        H+ AE L   S GI++ ++      +I+ Y
Sbjct: 609 FDGTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVY 668

Query: 291 RGKNYVRPEVMSPPDTLSKNKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQ 337
           RGKNY RP+ + P   LSK +AL++    Q  +     + KL   +E+  + L +
Sbjct: 669 RGKNYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVE 720

[Close]

BLAST of Cp4.1LG15g02330 vs. Swiss-Prot
Match: CFM3_MAIZE (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays GN=CFM3 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.1e-19
Identity = 67/185 (36.22%), Postives = 98/185 (52.97%), Query Frame = 1


Query: 166 LEKAKRKEAWLIEKLRKFEVPKSVLETYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVF 225
           +EKA+R    +   LR  E      ++  PE +T+EE+   ++ G + K F+LLGRRGVF
Sbjct: 558 MEKAERVLGKVETALRPTE------DSRPPETITDEERFMFRKLGLRMKAFLLLGRRGVF 617

Query: 226 GGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVID---IKPNNSIVFYR 285
            G + NMHLHWK  E VK++ K      V   A  L   S GI++    +    +IV +R
Sbjct: 618 DGTIENMHLHWKYRELVKILVKAKSFADVKRIALSLEAESGGILVSVDKVSKGYAIVVFR 677

Query: 286 GKNYVRPEVMSPPDTLSKNKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKE 345
           GKNY RP  + P + LSK KAL +    Q  +  S+   KL +++E  +  L Q +  KE
Sbjct: 678 GKNYRRPSSLRPRNLLSKRKALARSIELQRHQALSRHFAKLNRKVERLKAELVQMEDVKE 736

Query: 346 EAAVE 348
           +   E
Sbjct: 738 QGDEE 736

[Close]

BLAST of Cp4.1LG15g02330 vs. Swiss-Prot
Match: CFM3A_ARATH (CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=CFM3A PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 9.4e-19
Identity = 70/185 (37.84%), Postives = 99/185 (53.51%), Query Frame = 1


Query: 166 LEKAKRKEAWLIEKLRKFEVPKSVLETY--------DPEILTEEEKHYLKRTGEKKKNFV 225
           + K +RK A+   KL K E   + +E          DPE +T+EE+   ++ G K K F+
Sbjct: 598 VRKLERKLAFAERKLLKAERGLAKVEVCLKPAEQREDPESITDEERFMFRKLGLKMKAFL 657

Query: 226 LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDI---KP 285
           LLGRRGVF G V NMHLHWK  E VK+I K      V + A  L   S GI++ I     
Sbjct: 658 LLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTK 717

Query: 286 NNSIVFYRGKNYVRPEVMSPPDTLSKNKAL----EKYKYEQSLEHTSQF---IEKLEKEL 333
             +I+ YRG++Y RP ++ P + L+K KAL    E  + E  L+H S      ++L  E+
Sbjct: 718 GYAIIVYRGQDYKRPTMLRPKNLLTKRKALARSIELQRREGLLKHISTMQAKAKQLRAEI 777

[Close]

BLAST of Cp4.1LG15g02330 vs. TrEMBL
Match: A0A0A0K5Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G062730 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 2.0e-153
Identity = 292/353 (82.72%), Postives = 313/353 (88.67%), Query Frame = 1


Query: 1   MSRGHALSI-AISRDSLYGFISMIRNVSRLSLFNISTSFGQSSYGSCEYQISNCISKSLQ 60
           M R   LSI A SR SL+GFI +IRNVS LSL +I TSF QSS+GS E+Q S+CI KSL 
Sbjct: 1   MPRCRGLSIIAFSRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLN 60

Query: 61  ESTSIRYLPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTN 120
           ES S    PGF F +RYSM ES GGF++WQSVRHFSN  VELKTD+N VRFSFG  SSTN
Sbjct: 61  ESMSRDCPPGFSFTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTN 120

Query: 121 GSPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK 180
           GS  KQK VAK K+SKKAKLNELR YRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK
Sbjct: 121 GSRLKQK-VAKTKMSKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK 180

Query: 181 LRKFEVPKSVLETYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKH 240
           LRKFE+PK  +E YDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMH+HWKKH
Sbjct: 181 LRKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKH 240

Query: 241 ETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVRPEVMSPPDTLS 300
           ETVKVICKPCKPGQVHEYAEEL RLSKGIVIDIKPNNSI+FYRGKNYV+PEVMSPP+TLS
Sbjct: 241 ETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLS 300

Query: 301 KNKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAAVEFMVNS 353
           K+KALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKR+KE+AA+E MVNS
Sbjct: 301 KDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAALESMVNS 352

[Close]

BLAST of Cp4.1LG15g02330 vs. TrEMBL
Match: A0A067LDM8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09572 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 7.3e-111
Identity = 209/277 (75.45%), Postives = 234/277 (84.48%), Query Frame = 1


Query: 68  PGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQKK 127
           P F   +R ++  S      W   R  S  + ELKTD+++VRF+FG     NGS  K+KK
Sbjct: 77  PNFLLTQRLNVFASHSVLRSWVYRRWMSRASFELKTDNDVVRFAFGKQPGKNGSSEKRKK 136

Query: 128 VAK-AKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVP 187
             K  K+S+KAKLNELR YRLKAKKKK SPNPEVRIRY LEKAKRKE WLIEKLRKFEVP
Sbjct: 137 TTKRVKMSRKAKLNELRFYRLKAKKKKNSPNPEVRIRYKLEKAKRKEVWLIEKLRKFEVP 196

Query: 188 KSVLETYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVIC 247
           K   E YDPEILTEEEKHYLKRTGEKKKNFVL+GRRGVFGGVVLNMHLHWKKHETVKVIC
Sbjct: 197 KIPAEVYDPEILTEEEKHYLKRTGEKKKNFVLVGRRGVFGGVVLNMHLHWKKHETVKVIC 256

Query: 248 KPCKPGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVRPEVMSPPDTLSKNKALEK 307
           +PCKPGQ+HEYAEELARLSKGIVIDIKPNNSIVFYRGKNYV+PEVMSPP+TLSK KALEK
Sbjct: 257 RPCKPGQIHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVQPEVMSPPNTLSKQKALEK 316

Query: 308 YKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEE 344
           YKYEQSLEHTSQFIEKLEKELE++ +H+A++++ KE+
Sbjct: 317 YKYEQSLEHTSQFIEKLEKELEEYLEHVARYRKLKED 353

[Close]

BLAST of Cp4.1LG15g02330 vs. TrEMBL
Match: K7KRJ8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G236500 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 5.2e-109
Identity = 216/339 (63.72%), Postives = 259/339 (76.40%), Query Frame = 1


Query: 8   SIAISRDSLYGFISMIRNVSRLSLFNISTSFGQS-SYGSCEYQISNCISKSLQESTSIRY 67
           S   +RDSL+    ++ +V  ++    +TS+  S +   C YQ +      L   +S+  
Sbjct: 15  SCTFNRDSLFWLCCLVEHVPTIASCPTTTSYFWSFTPDKCIYQRTYRTPSHLSGVSSLAS 74

Query: 68  LPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQK 127
             GF   +R ++  S      W   R+ SN +VELKT ++++RFS G S   N + + Q 
Sbjct: 75  RSGFLLMQRSNIFGSHDILGSWLPARYISNESVELKTHNDVIRFSLGKSDDINNAKKSQL 134

Query: 128 KVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVP 187
              K K+S+KAKLNELR YRLKAKKK  SPNPEVRIRY LEKAKRKE WLIEKLRKF+VP
Sbjct: 135 N-KKFKMSRKAKLNELRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKETWLIEKLRKFDVP 194

Query: 188 KSVLETYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVIC 247
           K   ETYDPEILTEEE+HYLKRTGE+KK++V +GRRGVFGGVVLNMHLHWK HETVKVIC
Sbjct: 195 KPPPETYDPEILTEEERHYLKRTGERKKHYVPVGRRGVFGGVVLNMHLHWKNHETVKVIC 254

Query: 248 KPCKPGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVRPEVMSPPDTLSKNKALEK 307
           KPCKPGQVHEYAEELARLSKGIVIDIKPNN+I+FYRGKNYV+PEVMSPP+TLSK KALEK
Sbjct: 255 KPCKPGQVHEYAEELARLSKGIVIDIKPNNTIIFYRGKNYVKPEVMSPPNTLSKAKALEK 314

Query: 308 YKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAA 346
           Y+YEQSLEHTSQFIEKLEKELE++ +HLA+FK+ KE+ A
Sbjct: 315 YRYEQSLEHTSQFIEKLEKELEEYHQHLAKFKKGKEDTA 352

[Close]

BLAST of Cp4.1LG15g02330 vs. TrEMBL
Match: K7L4Y3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G043700 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 9.8e-108
Identity = 214/339 (63.13%), Postives = 258/339 (76.11%), Query Frame = 1


Query: 8   SIAISRDSLYGFISMIRNVSRLSLFNISTSFGQS-SYGSCEYQISNCISKSLQESTSIRY 67
           S   +RDSL+    ++ +V  ++    +TS+  S +   C +Q +    + L    S+  
Sbjct: 15  SCTFNRDSLFWLCCLVEHVPTIASSPTTTSYFWSFTPDKCIHQRTYRTPRHLSRVPSLSS 74

Query: 68  LPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQK 127
            PGF   +R ++         W   R+ SN +VELKTD+N+VRFS   S   N   + Q 
Sbjct: 75  RPGFLLMQRSNIFGIHDILGNWLPARYISNESVELKTDNNVVRFSLDKSDDINYGKKSQL 134

Query: 128 KVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVP 187
              + K+S+KAKLNELR YRLKAKKK  SPNPEVRI Y LEKAKRKE WL+EKLRKF+VP
Sbjct: 135 N-KRVKMSRKAKLNELRFYRLKAKKKMISPNPEVRITYKLEKAKRKETWLVEKLRKFDVP 194

Query: 188 KSVLETYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVIC 247
           KS  ET+DPEILTEEE+HYLKRTGEKKK++V +GRRGVFGGVVLNMHLHWK HETVKVIC
Sbjct: 195 KSPPETFDPEILTEEERHYLKRTGEKKKHYVPVGRRGVFGGVVLNMHLHWKNHETVKVIC 254

Query: 248 KPCKPGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVRPEVMSPPDTLSKNKALEK 307
           KPCKPGQVHEYAEELARLSKGIVIDIKPNN+I+FYRGKNYV+PEVMSPP+TLSK KALEK
Sbjct: 255 KPCKPGQVHEYAEELARLSKGIVIDIKPNNTIIFYRGKNYVQPEVMSPPNTLSKVKALEK 314

Query: 308 YKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAA 346
           Y+YEQSLEHTSQFIE+LEKELE++ +HLA+FK+ KE+ A
Sbjct: 315 YRYEQSLEHTSQFIERLEKELEEYHQHLAKFKKGKEDNA 352

[Close]

BLAST of Cp4.1LG15g02330 vs. TrEMBL
Match: K7L4Y2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G043700 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 9.8e-108
Identity = 214/339 (63.13%), Postives = 258/339 (76.11%), Query Frame = 1


Query: 8   SIAISRDSLYGFISMIRNVSRLSLFNISTSFGQS-SYGSCEYQISNCISKSLQESTSIRY 67
           S   +RDSL+    ++ +V  ++    +TS+  S +   C +Q +    + L    S+  
Sbjct: 15  SCTFNRDSLFWLCCLVEHVPTIASSPTTTSYFWSFTPDKCIHQRTYRTPRHLSRVPSLSS 74

Query: 68  LPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQK 127
            PGF   +R ++         W   R+ SN +VELKTD+N+VRFS   S   N   + Q 
Sbjct: 75  RPGFLLMQRSNIFGIHDILGNWLPARYISNESVELKTDNNVVRFSLDKSDDINYGKKSQL 134

Query: 128 KVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVP 187
              + K+S+KAKLNELR YRLKAKKK  SPNPEVRI Y LEKAKRKE WL+EKLRKF+VP
Sbjct: 135 N-KRVKMSRKAKLNELRFYRLKAKKKMISPNPEVRITYKLEKAKRKETWLVEKLRKFDVP 194

Query: 188 KSVLETYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVIC 247
           KS  ET+DPEILTEEE+HYLKRTGEKKK++V +GRRGVFGGVVLNMHLHWK HETVKVIC
Sbjct: 195 KSPPETFDPEILTEEERHYLKRTGEKKKHYVPVGRRGVFGGVVLNMHLHWKNHETVKVIC 254

Query: 248 KPCKPGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVRPEVMSPPDTLSKNKALEK 307
           KPCKPGQVHEYAEELARLSKGIVIDIKPNN+I+FYRGKNYV+PEVMSPP+TLSK KALEK
Sbjct: 255 KPCKPGQVHEYAEELARLSKGIVIDIKPNNTIIFYRGKNYVQPEVMSPPNTLSKVKALEK 314

Query: 308 YKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAA 346
           Y+YEQSLEHTSQFIE+LEKELE++ +HLA+FK+ KE+ A
Sbjct: 315 YRYEQSLEHTSQFIERLEKELEEYHQHLAKFKKGKEDNA 352

[Close]

BLAST of Cp4.1LG15g02330 vs. TAIR10
Match: AT4G13070.1 (AT4G13070.1 RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 387.1 bits (993), Expect = 1.1e-107
Identity = 214/343 (62.39%), Postives = 258/343 (75.22%), Query Frame = 1


Query: 7   LSIAISRDSLYGFISMIRNVSRLSLFNISTSFGQSSYGSCEYQISNCISKSLQESTSIRY 66
           L++  +++    F+   +  SR  L +  +S   S   S  +    C S S   S + R+
Sbjct: 2   LALGYAKEIAQRFLRNPKWTSRFFLLHYQSSNYSSYVKSRPFLQVQCKSASFDVSQAQRW 61

Query: 67  LPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNGS---PR 126
                         +L  ++   S R+ SN  +EL+TD N+VRF+F   SS+  +    R
Sbjct: 62  --------------NLFAYDGLFSRRYLSNSTIELRTDDNVVRFAFNNVSSSGNNVVPTR 121

Query: 127 KQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKF 186
           K+KK  +AKLS+KAK+NELR YRLKAKKK  SPNPEVRIRY LEKAKRKE WLIEKLRK+
Sbjct: 122 KEKKWKRAKLSRKAKVNELRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKEEWLIEKLRKY 181

Query: 187 EVPKSVLETYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVK 246
           +VPKS  E YDPE LTEEE+HYLKRTGEK+KNFVL+GRRGVFGGVVLN+HLHWKKHETVK
Sbjct: 182 DVPKSPAEPYDPESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVK 241

Query: 247 VICKPC-KPGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVRPEVMSPPDTLSKNK 306
           VICKPC KPGQVHEYAEELARLSKGIVID+KPNN+IV YRGKNYVRPEVMSP DTLSK+K
Sbjct: 242 VICKPCNKPGQVHEYAEELARLSKGIVIDVKPNNTIVLYRGKNYVRPEVMSPVDTLSKDK 301

Query: 307 ALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAA 346
           ALEKY+YEQSLEHTS+FIEKLEKELE++ K++A+ K+KK+E A
Sbjct: 302 ALEKYRYEQSLEHTSEFIEKLEKELEEYHKYVARHKKKKDEEA 330

[Close]

BLAST of Cp4.1LG15g02330 vs. TAIR10
Match: AT2G28480.1 (AT2G28480.1 RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 214.2 bits (544), Expect = 1.3e-55
Identity = 123/225 (54.67%), Postives = 155/225 (68.89%), Query Frame = 1


Query: 122 PRKQKKVAKAKLSKKAK--------LNELRLYRLKAK-KKKTSPNPEVRIRYSLEKAKRK 181
           P+K K + K +L  K K         N     RL  K KKK   N E RI+Y LEKAK K
Sbjct: 79  PKKYKWLTKKRLKLKRKKEREERNAANRKDPRRLTVKGKKKKFVNAEERIKYKLEKAKIK 138

Query: 182 EAWLIEKLRKFEVPKSVLETYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNM 241
           EA LIE+L+++EV K       P  +T EE+ YLK+ G+K+ N+V +GRRGVFGGV+LNM
Sbjct: 139 EALLIERLKRYEVAKVQGPEVRPHEITGEERFYLKKMGQKRSNYVPIGRRGVFGGVILNM 198

Query: 242 HLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVRPEVM 301
           HLHWKKHETVKVIC   KPGQV +YAEELA+LS G+ ++I  +++I+FYRGK YV+P+VM
Sbjct: 199 HLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGVPVNIIGDDTIIFYRGKGYVQPQVM 258

Query: 302 SPPDTLSKNKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQF 338
           SP DTLSK +A EK KYEQSLE    FI   EKELE + +H+A +
Sbjct: 259 SPIDTLSKKRAYEKSKYEQSLESVRHFIAIAEKELELYYRHVALY 303

[Close]

BLAST of Cp4.1LG15g02330 vs. TAIR10
Match: AT3G25440.1 (AT3G25440.1 RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-41
Identity = 125/330 (37.88%), Postives = 183/330 (55.45%), Query Frame = 1


Query: 22  MIRNVSRLSLFNISTSFGQSSYGSCEYQISNC--ISKSLQESTSIRYLPGFFFAKRYSMC 81
           ++R  SR   F  S+S   SS+ S    IS+C  + K L + +  R +    F +  S  
Sbjct: 18  LLRRKSRQLGFLASSSPLFSSFNSMNRTISSCNIVCKVLHKESLTRPMWNVSFLRSSS-- 77

Query: 82  ESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQKKVAKAKLSKKAKL 141
                   + S      G  ++    N        SSS +G    + K  K K  K+A +
Sbjct: 78  --------FHSTPARETGDDDISKSEN--------SSSQDGDSCTKLKRKKLK-GKRAVV 137

Query: 142 NELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVLETYDPEILT 201
             L+ +R K KK+      E +I   L KA++KE  L+E ++K E  +S   T+DPEILT
Sbjct: 138 RWLKFFRWKKKKEFERMTSEEKILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILT 197

Query: 202 EEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAE 261
            EE  Y  + G K KN+V +GRRG++ GV+LNMHLHWKKH+T++V+ K   P +V E A 
Sbjct: 198 PEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAV 257

Query: 262 ELARLSKGIVIDIKPNNSIVFYRGKNYVRP--EVMSPPDTLSKNKALEKYKYEQSLEHTS 321
           ELARL+ GIV+D+   N+I+ YRGKNYV+P  E+MSP  TL + KAL+K K   +L    
Sbjct: 258 ELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVR 317

Query: 322 QFIEKLEKELEDFQKHLAQFKRKKEEAAVE 348
           ++I +LE+EL+  Q   AQ + K++   V+
Sbjct: 318 KYIPRLEQELQLLQ---AQAETKRDYTNVK 325

[Close]

BLAST of Cp4.1LG15g02330 vs. TAIR10
Match: AT3G27550.1 (AT3G27550.1 RNA-binding CRS1 / YhbY (CRM) domain protein)

HSP 1 Score: 151.0 bits (380), Expect = 1.4e-36
Identity = 89/214 (41.59%), Postives = 137/214 (64.02%), Query Frame = 1


Query: 114 GSSSTNGSPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE 173
           G S++ G   + K  ++ +      L E+R  R K  KKK   + E R+ Y+L++AK+K 
Sbjct: 11  GMSTSRGRSMRSKVESRMRKESGKTLREIR--RAKKLKKKLMTDEE-RLIYNLKRAKKKV 70

Query: 174 AWLIEKLRKFEVPKSVLETYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMH 233
           A L++KL+K+++P+     +DPE+ T E+    K+ G K KN+V +G RGVFGGVV NMH
Sbjct: 71  ALLLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMH 130

Query: 234 LHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVRPEVMS 293
           +HWK HETV+V C      ++ E A  +ARLS G+VI+I    +I+ +RG+NY +P+ + 
Sbjct: 131 MHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLI 190

Query: 294 PPDTLSKNKALEKYKYEQSLEHTSQFIEKLEKEL 328
           P +TL+K KAL K ++EQ+LE     I+K E++L
Sbjct: 191 PVNTLTKRKALFKARFEQALESQKLNIKKTEQQL 221

[Close]

BLAST of Cp4.1LG15g02330 vs. TAIR10
Match: AT3G18390.1 (AT3G18390.1 CRS1 / YhbY (CRM) domain-containing protein)

HSP 1 Score: 102.1 bits (253), Expect = 7.4e-22
Identity = 67/180 (37.22%), Postives = 100/180 (55.56%), Query Frame = 1


Query: 161 RIRYSLEKAKRK---EAWLIEKLRKFEVPKSVLETYDPEILTEEEKHYLKRTGEKKKNFV 220
           RI++ L  A+ K      L+ K+    +P      YD E+++EEE+   ++ G K K ++
Sbjct: 615 RIQHKLNLAQSKFQRAEKLLSKIEASMIPNG--PDYDQEVISEEERAMFRKVGLKMKAYL 674

Query: 221 LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIK---P 280
            +G RGVF GV+ NMHLHWK  E VK+I K      V E A  L   S G+++ I+    
Sbjct: 675 PIGIRGVFDGVIENMHLHWKHRELVKLISKQKNQAFVEETARLLEYESGGVLVAIEKVPK 734

Query: 281 NNSIVFYRGKNYVRPEVMSPPDTLSKNKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHL 335
             ++++YRGKNY RP  + P + L+K KAL++    Q  E  SQ I +LE+ +E  Q  L
Sbjct: 735 GFALIYYRGKNYRRPISLRPRNLLTKAKALKRSIAMQRHEALSQHISELERTIEQMQSQL 792

[Close]

BLAST of Cp4.1LG15g02330 vs. NCBI nr
Match: gi|778724321|ref|XP_011658783.1| (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucumis sativus])

HSP 1 Score: 550.1 bits (1416), Expect = 2.9e-153
Identity = 292/353 (82.72%), Postives = 313/353 (88.67%), Query Frame = 1


Query: 1   MSRGHALSI-AISRDSLYGFISMIRNVSRLSLFNISTSFGQSSYGSCEYQISNCISKSLQ 60
           M R   LSI A SR SL+GFI +IRNVS LSL +I TSF QSS+GS E+Q S+CI KSL 
Sbjct: 1   MPRCRGLSIIAFSRGSLFGFIPLIRNVSPLSLLSIPTSFEQSSHGSWEHQASSCIVKSLN 60

Query: 61  ESTSIRYLPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTN 120
           ES S    PGF F +RYSM ES GGF++WQSVRHFSN  VELKTD+N VRFSFG  SSTN
Sbjct: 61  ESMSRDCPPGFSFTRRYSMRESSGGFKRWQSVRHFSNAVVELKTDNNTVRFSFGCPSSTN 120

Query: 121 GSPRKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK 180
           GS  KQK VAK K+SKKAKLNELR YRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK
Sbjct: 121 GSRLKQK-VAKTKMSKKAKLNELRFYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEK 180

Query: 181 LRKFEVPKSVLETYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKH 240
           LRKFE+PK  +E YDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMH+HWKKH
Sbjct: 181 LRKFEIPKPFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKH 240

Query: 241 ETVKVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVRPEVMSPPDTLS 300
           ETVKVICKPCKPGQVHEYAEEL RLSKGIVIDIKPNNSI+FYRGKNYV+PEVMSPP+TLS
Sbjct: 241 ETVKVICKPCKPGQVHEYAEELTRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPNTLS 300

Query: 301 KNKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAAVEFMVNS 353
           K+KALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKR+KE+AA+E MVNS
Sbjct: 301 KDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDAALESMVNS 352

[Close]

BLAST of Cp4.1LG15g02330 vs. NCBI nr
Match: gi|659110425|ref|XP_008455218.1| (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucumis melo])

HSP 1 Score: 545.4 bits (1404), Expect = 7.2e-152
Identity = 287/342 (83.92%), Postives = 308/342 (90.06%), Query Frame = 1


Query: 3   RGHALSIAISRDSLYGFISMIRNVSRLSLFNISTSFGQSSYGSCEYQISNCISKSLQEST 62
           RG ++ I ISR SL+GF S+IRN S LSL ++ TSFGQSS+GSCE+Q S+ I KSL EST
Sbjct: 5   RGQSI-ITISRGSLFGFTSLIRNASPLSLLSVPTSFGQSSHGSCEHQASSRIVKSLNEST 64

Query: 63  SIRYLPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSP 122
           S    PG     RYSM ES GGF++WQSVRHFSN  VELKTDSN VRFSFG  SSTNGS 
Sbjct: 65  SRDCPPGSSLTWRYSMWESYGGFKRWQSVRHFSNAVVELKTDSNTVRFSFG-PSSTNGSQ 124

Query: 123 RKQKKVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRK 182
            KQKKVAK KLSKK KLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRK
Sbjct: 125 LKQKKVAKTKLSKKDKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRK 184

Query: 183 FEVPKSVLETYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETV 242
           FE+PKSV+E YDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMH+HWKKHETV
Sbjct: 185 FEIPKSVVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETV 244

Query: 243 KVICKPCKPGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVRPEVMSPPDTLSKNK 302
           KVICKPCKPGQVHEYAEEL+RLSKGIVIDIKPNNSI+FYRGKNYV+PEVMSPPDTLSK+K
Sbjct: 245 KVICKPCKPGQVHEYAEELSRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDK 304

Query: 303 ALEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEA 345
           ALEKY+YEQSLEHTSQFIEKLEKELEDFQKHLAQFKR+KE+A
Sbjct: 305 ALEKYRYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDA 344

[Close]

BLAST of Cp4.1LG15g02330 vs. NCBI nr
Match: gi|1009151157|ref|XP_015893402.1| (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic isoform X1 [Ziziphus jujuba])

HSP 1 Score: 409.1 bits (1050), Expect = 8.0e-111
Identity = 224/344 (65.12%), Postives = 266/344 (77.33%), Query Frame = 1


Query: 11  ISRDSLYGFISMIRNVSRLSLFNISTSFGQSSYG--SCEYQISNCISKSLQESTSIRYLP 70
           I+RDSL  F  +   VS +SL   S +F + +    +C ++ S  +S+ L E        
Sbjct: 18  ITRDSLVPFCRLAHKVSDISL---SATFFRRTLACIACMHKQSYSVSRPLLEVPYAISAL 77

Query: 71  GFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQKKV 130
            F   +R +M  +   F KW   R+ SN +V+LKTDSNI++FS G     NGS  K KK 
Sbjct: 78  DFSLVQRRNMLVAQSNFRKWIFSRYNSNTSVQLKTDSNIIKFSIG---IHNGSSPKGKKT 137

Query: 131 AK-AKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPK 190
            K  K+SKKAKLNELR YRLKAKKK  SPNPEVRIRY LEKAKRKE WLIEKLRKFE+ K
Sbjct: 138 TKQVKMSKKAKLNELRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKETWLIEKLRKFEISK 197

Query: 191 SVLETYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICK 250
           +  ETYDPEILTEEEKHYLKRTGEKKK++V +GRRGVFGGVVLNMHLHWK HETVKVIC+
Sbjct: 198 APAETYDPEILTEEEKHYLKRTGEKKKHYVPVGRRGVFGGVVLNMHLHWKNHETVKVICR 257

Query: 251 PCKPGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVRPEVMSPPDTLSKNKALEKY 310
           PCKPGQ+HEYAEELARLSKGIVIDIKPNN+I+FYRGKNYV+PE+MSPP+TLSKNKALEKY
Sbjct: 258 PCKPGQIHEYAEELARLSKGIVIDIKPNNTIIFYRGKNYVQPEMMSPPETLSKNKALEKY 317

Query: 311 KYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAAVEFMVN 352
           KY QSLEHTSQFIEKLEKELE++ +HLA++K+ K  ++ +F+ N
Sbjct: 318 KYLQSLEHTSQFIEKLEKELEEYHRHLARYKQGKTYSSQDFVDN 355

[Close]

BLAST of Cp4.1LG15g02330 vs. NCBI nr
Match: gi|802542415|ref|XP_012081307.1| (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Jatropha curcas])

HSP 1 Score: 408.7 bits (1049), Expect = 1.0e-110
Identity = 209/277 (75.45%), Postives = 234/277 (84.48%), Query Frame = 1


Query: 68  PGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQKK 127
           P F   +R ++  S      W   R  S  + ELKTD+++VRF+FG     NGS  K+KK
Sbjct: 77  PNFLLTQRLNVFASHSVLRSWVYRRWMSRASFELKTDNDVVRFAFGKQPGKNGSSEKRKK 136

Query: 128 VAK-AKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVP 187
             K  K+S+KAKLNELR YRLKAKKKK SPNPEVRIRY LEKAKRKE WLIEKLRKFEVP
Sbjct: 137 TTKRVKMSRKAKLNELRFYRLKAKKKKNSPNPEVRIRYKLEKAKRKEVWLIEKLRKFEVP 196

Query: 188 KSVLETYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVIC 247
           K   E YDPEILTEEEKHYLKRTGEKKKNFVL+GRRGVFGGVVLNMHLHWKKHETVKVIC
Sbjct: 197 KIPAEVYDPEILTEEEKHYLKRTGEKKKNFVLVGRRGVFGGVVLNMHLHWKKHETVKVIC 256

Query: 248 KPCKPGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVRPEVMSPPDTLSKNKALEK 307
           +PCKPGQ+HEYAEELARLSKGIVIDIKPNNSIVFYRGKNYV+PEVMSPP+TLSK KALEK
Sbjct: 257 RPCKPGQIHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVQPEVMSPPNTLSKQKALEK 316

Query: 308 YKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEE 344
           YKYEQSLEHTSQFIEKLEKELE++ +H+A++++ KE+
Sbjct: 317 YKYEQSLEHTSQFIEKLEKELEEYLEHVARYRKLKED 353

[Close]

BLAST of Cp4.1LG15g02330 vs. NCBI nr
Match: gi|955322124|ref|XP_014631386.1| (PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like [Glycine max])

HSP 1 Score: 402.5 bits (1033), Expect = 7.5e-109
Identity = 216/339 (63.72%), Postives = 259/339 (76.40%), Query Frame = 1


Query: 8   SIAISRDSLYGFISMIRNVSRLSLFNISTSFGQS-SYGSCEYQISNCISKSLQESTSIRY 67
           S   +RDSL+    ++ +V  ++    +TS+  S +   C YQ +      L   +S+  
Sbjct: 15  SCTFNRDSLFWLCCLVEHVPTIASCPTTTSYFWSFTPDKCIYQRTYRTPSHLSGVSSLAS 74

Query: 68  LPGFFFAKRYSMCESLGGFEKWQSVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQK 127
             GF   +R ++  S      W   R+ SN +VELKT ++++RFS G S   N + + Q 
Sbjct: 75  RSGFLLMQRSNIFGSHDILGSWLPARYISNESVELKTHNDVIRFSLGKSDDINNAKKSQL 134

Query: 128 KVAKAKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVP 187
              K K+S+KAKLNELR YRLKAKKK  SPNPEVRIRY LEKAKRKE WLIEKLRKF+VP
Sbjct: 135 N-KKFKMSRKAKLNELRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKETWLIEKLRKFDVP 194

Query: 188 KSVLETYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVIC 247
           K   ETYDPEILTEEE+HYLKRTGE+KK++V +GRRGVFGGVVLNMHLHWK HETVKVIC
Sbjct: 195 KPPPETYDPEILTEEERHYLKRTGERKKHYVPVGRRGVFGGVVLNMHLHWKNHETVKVIC 254

Query: 248 KPCKPGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVRPEVMSPPDTLSKNKALEK 307
           KPCKPGQVHEYAEELARLSKGIVIDIKPNN+I+FYRGKNYV+PEVMSPP+TLSK KALEK
Sbjct: 255 KPCKPGQVHEYAEELARLSKGIVIDIKPNNTIIFYRGKNYVKPEVMSPPNTLSKAKALEK 314

Query: 308 YKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAA 346
           Y+YEQSLEHTSQFIEKLEKELE++ +HLA+FK+ KE+ A
Sbjct: 315 YRYEQSLEHTSQFIEKLEKELEEYHQHLAKFKKGKEDTA 352

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g02330 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y3544_ARATH	2.5e-40	37.88	Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabid...	[more]
CFM3_ORYSJ	1.3e-20	36.13	CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa s...	[more]
CFM2_ARATH	2.2e-20	31.49	CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana GN=CFM2...	[more]
CFM3_MAIZE	1.1e-19	36.22	CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays GN=CF...	[more]
CFM3A_ARATH	9.4e-19	37.84	CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis t...	[more]

BLAST of Cp4.1LG15g02330 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5Y2_CUCSA	2.0e-153	82.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G062730 PE=4 SV=1	[more]
A0A067LDM8_JATCU	7.3e-111	75.45	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09572 PE=4 SV=1	[more]
K7KRJ8_SOYBN	5.2e-109	63.72	Uncharacterized protein OS=Glycine max GN=GLYMA_05G236500 PE=4 SV=1	[more]
K7L4Y3_SOYBN	9.8e-108	63.13	Uncharacterized protein OS=Glycine max GN=GLYMA_08G043700 PE=4 SV=1	[more]
K7L4Y2_SOYBN	9.8e-108	63.13	Uncharacterized protein OS=Glycine max GN=GLYMA_08G043700 PE=4 SV=1	[more]

BLAST of Cp4.1LG15g02330 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G13070.1	1.1e-107	62.39	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT2G28480.1	1.3e-55	54.67	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G25440.1	1.4e-41	37.88	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G27550.1	1.4e-36	41.59	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G18390.1	7.4e-22	37.22	CRS1 / YhbY (CRM) domain-containing protein	[more]

BLAST of Cp4.1LG15g02330 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778724321\|ref\|XP_011658783.1\|	2.9e-153	82.72	PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplasti...	[more]
gi\|659110425\|ref\|XP_008455218.1\|	7.2e-152	83.92	PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplasti...	[more]
gi\|1009151157\|ref\|XP_015893402.1\|	8.0e-111	65.12	PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplasti...	[more]
gi\|802542415\|ref\|XP_012081307.1\|	1.0e-110	75.45	PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplasti...	[more]
gi\|955322124\|ref\|XP_014631386.1\|	7.5e-109	63.72	PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplasti...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001890	RNA-binding_CRM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g02330.1	Cp4.1LG15g02330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001890	RNA-binding, CRM domain	GENE3D	G3DSA:3.30.110.60		coord: 198..292 score: 1.3
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 198..282 score: 5.7
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 198..282 score: 1.6
IPR001890	RNA-binding, CRM domain	PROFILE	PS51295	CRM	coord: 196..293 score: 19
IPR001890	RNA-binding, CRM domain	unknown	SSF75471	YhbY-like	coord: 197..292 score: 1.83
None	No IPR available	unknown	Coil	Coil	coord: 313..347 scor
None	No IPR available	PANTHER	PTHR31426	FAMILY NOT NAMED	coord: 9..345 score: 1.2E
None	No IPR available	PANTHER	PTHR31426:SF3	SUBFAMILY NOT NAMED	coord: 9..345 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG15g02330	Cucsa.217840	Cucumber (Gy14) v1	cgycpeB0595
Cp4.1LG15g02330	CmaCh19G002610	Cucurbita maxima (Rimu)	cmacpeB522
Cp4.1LG15g02330	CmoCh19G002820	Cucurbita moschata (Rifu)	cmocpeB481
Cp4.1LG15g02330	Cla001845	Watermelon (97103) v1	cpewmB238
Cp4.1LG15g02330	Csa7G062730	Cucumber (Chinese Long) v2	cpecuB261
Cp4.1LG15g02330	MELO3C018653	Melon (DHL92) v3.5.1	cpemeB217
Cp4.1LG15g02330	ClCG09G015320	Watermelon (Charleston Gray)	cpewcgB221
Cp4.1LG15g02330	CSPI07G05440	Wild cucumber (PI 183967)	cpecpiB262
Cp4.1LG15g02330	Lsi03G007720	Bottle gourd (USVL1VR-Ls)	cpelsiB206
Cp4.1LG15g02330	MELO3C018653.2	Melon (DHL92) v3.6.1	cpemedB256
Cp4.1LG15g02330	CsaV3_7G006390	Cucumber (Chinese Long) v3	cpecucB0326
Cp4.1LG15g02330	Bhi05G000689	Wax gourd	cpewgoB0329
Cp4.1LG15g02330	Carg24503	Silver-seed gourd	carcpeB1344

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG15g02330	Cucurbita pepo (Zucchini)	cpecpeB268
Cp4.1LG15g02330	Cucurbita maxima (Rimu)	cmacpeB120
Cp4.1LG15g02330	Cucurbita moschata (Rifu)	cmocpeB094
Cp4.1LG15g02330	Cucumber (Gy14) v2	cgybcpeB914