ClCG08G000260 (gene) Watermelon (Charleston Gray)

Overview
NameClCG08G000260
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein LENGTH=259
LocationCG_Chr08 : 821925 .. 826087 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTCCCAAGCAGATGCAGTCCACAACTGGTGCTGGTGCTACTGGTAGTCGTAGCTCCGGCGGCGGTACCGGCGGTGGCCTCGCTCGCTTCCGCTCTGCCCCTGCCGCCTGGTTGGAAGCGCTTTTGGAGGACGACGAGGAGGACCCTCTCAAGCCCAATCACTGCTTGACTCAGCTTCTCGCCGCCGACTCCTCCGACCTCGACTCTCCCGCTGATCAGCCCTTGTTCGACCCCAATCCCTCCCCGGCCTTCCACAGACAGAATAGCTCTCCCGCCGAGTTTCTCGCCGCCTCTGGAATTGGGGAAGGATTTTACACTGCCTATGCTCTCAATTCCTCCCCCACTCTTGACATCTCTCCCACCTCCAAGCGAGCTAGAGAAGTCGACCCCCAAAACTTCTCCCCCAAATTTTCACCTCAACTGGTAATCATCTTATTTAGAAGCCTCTGTTTCGCGATTCCCATTCAGGATTTCATTTCACTCTAGTTTTCCTTTGATTATGGTCTCACCAGCAACCTAGTTTATTTTGATTTTTAAGTGAAATTTTCGGCAGAAAAGGGAAGGAAGTGGAGTTTCCAGTTTAATAGACATGGAAATGGAGAAGTTATTGGAGGACTCTGTGCCCTGCCGGGTAAGGGCCAAGCGTGGCTGTGCGACGCATCCTCGGAGCATTGCGGAGAGGGTTAGTTCTTTTCACCTTATATCTTCCTTCACTGTTTTCGTTGACTACTTTTCAATAACCAGTCTCACCTCTCCATAACATATGCTGACTTTTGAGATGGATTCCTTTGCTCTATTCACCGTTCATCATCTGTGCTCTCAACTTTGACATTCTATCCCTATCCAATTTGGTGGCCTTTCTGCTGTTATTTTATCGAATAACCTTACTCTTTTTTCTATTATTTGTTGCCAAGCTATGTCAAATCATTACTTGTTAGTCTAATCACTATGTCGGGTCAACAAAACACACAACAAAGAGGTATGTCGATAAGTCGATTACTTATTTATTTTCTTTTTTTTGGTTTTCTTGATGGTAGGTTCGTAGGACTAGAATTAGTGACAGAATAAGGAAGCTTCAGGAGGTTGTCCCCAACATGGATAAGGTAAACTATGTCATGATTGATCATTATGATTGAATTTAGATATATCTTTTGTGATATATATTGAGAATGACTGTATTTTGTTCTGCCATGTGATTATTCTTGCAGTTCCTTTCTTGAATTCCATATTTGGCTGGTACTTTACTTTATGAATAATGAAGTCTAACGTGTACACAATTAGTTGAGTAATAGGGACAAGATTGTGTGGTTGCTTTCATTGATGTTGTTTTTAAACATTAATAATTTCAAATAATATATATATATATATATATATATATATATATATATATATTTTCTGGTGGGGCATAGAAACCATTTGATTGATTGACGAAACAGATTACCAGAAGAAGAAAAAACAAGCATATCAGTATGTAATTACAAAAACCAACTACAGACCTACAGTGTGTCATGAGGGACGGTAGACTATAGTTACAAAGTGCATTTTACATCTTCTAACCAGCAAAGCCATCTTACAAATGATTGGACTGATAAAGTTTACCAAATTTTACTGGAGTTAGTTTTAAATGGATGTGGCATGTACGTTAATTTATTTTATTTTTGGTCTTTTCATGTATCAGTTGTTATGTGAGCGGTGGTTTACTAATATGTAGAAAATAAATATTCATCTACTTTCTGGATAGTAAACAATTTTACTAAATAAATGAAATGACACTAGAGAGATACTAACCAAACAGTTTACAAAACACTTCTCTAATTAAAAAGGAGAGAATTTAAGCTGTCATTGTTGAAAGGAGGTATATTTTTAGACCAGTAAAGAGCCATAAAGCAGCTGTTTCAAAGGCTTCTTGTGGACAAGTTTTCTTGTCTTGGAAAATCCTAAGATTCCTTTTGTTTCATATCATCCATAAAACCGCTCTGATGGTGTTTAGCCAAAGAATACTCTTTGTAGATTTGAATATGCGTTCTGTTAATATCATTTCAATTCAATCCGTAAGCTCTAAAAGGTGGGATGGCATTCCAGCCAAGCGCACTAAAGATTTCAGTCCAAACTTTTGCAGAGAAGGGCAGTATAGTGAATCAAGATGTGCCTTTAAGATTCTTCAGCTTCTTAATACTAACCAAGCGATCTAGACCTCAGCTACATGCATGATGCCAATTAGTCCATTGAAGATTAGGCCAATGAGGAGAGCAACTTAGGATTGGATATGTAAGGGCGAGGCTGGGATTATTTACAGAGTGTATGCATCTGTTTGTTGGAATTCTGGAAGAACTTCAACGCATTTTGGTGACTTATCTTTGATGGTTGATTTTGAGATGAGAGCTTCTGAATATTTATATGGATAAGTAAACTTTTGGTCTCTTCCATGAGGTTTCAAAGGAACATTTTAGTCTTTGAAGCTAGAAAATAGTTCTAAATAGTGCTTGGGATTTGACCGTTAACTAATTGATGGAAAAATATAATTATTAATCTAATGGTGCAAAGCTTGGAAGCATCCATTTCAACATGTTCCCTTCTCCAATTGAGCTGAAAATTAGGTAAGCAGGTGGAGCGGCAGAGATGAAATTGGAGGCAGACTGGAGCTTCAATTCAACTAAGAACAAACTGGAAGCTGCCACCAACCTGTAAAGAAAAAACGAAGGGTTGGGTTAACTGACCCTACTGCTGAGGGAAATCCGTGTGTGCTACTTGAACGGTGTCTTAAGTAAATGCATATAATAAGCCCATAATATCTTCATTACCCACTCTGATTCTCTCTCTACAAACCCATTACCCTAAAGATAATACTTCCTGTAAACATGGGTTTTTGGAGAAATGAGTTGGAATCAATAACATGGTTTGGGTTTAGTGCTATTTGGATTTTGGACGGAGGGACTTTCTTTCTAGATCTGCTGGAACACAAGCATGAAGGACATCTGCTGAGAACAACCAAAAAATGCGGTGGGTAAGAGATAATGATGAAGGCATACGTTCCCAGATGACGATGGTGGTAGGCATTGTGGGTCATTGGAGGTTGGAGAAGAGTGGAGCAAATGACCAGAAGGGAAGAGAATGGAGGACGAAAGAGGGAGAGAGGGGAGTTGGCAAGTTGGAAAAGCAAAACACTTACTTGATCAACACATTTTGATTCCGTTTGTCCACTGATGGTGAATTGAGGTTAATCATTTAAAACCATTTTTTTTCAAACTTGTGGGAGCAAGGCTCAAACTTGAGGACCAATAATGCTCTGCCAATATTTAAATTGCTATGGGTAGGATTCTTATTTCTGCAATGGCTGTTTGTTTCAGGCCAGAACCCACGTTGTTTTCCTACTAGACATATTCTCCTTATACATTCCAAATCATTCTTACTGTTTCTAACCCTTGTGAGACAATAAGCATTGTTTTGATATGGACAAAAGACTTGTGTCTATATCTGATTTATGGAATTCGTGAAACTATTTGACGTCATCTATATTTGTTAGCTGGAGCCTAAATATATTTATTGATCTGTCGTTTTCAATCTTGTTGCAGCAAACAAACACTGCAGATATGTTAGAAGAAGCAGTAGAGTATGTCAAATTCCTTCAAAAGCAAATTCAGGTATTGAACTGAACTAGATACTCTCTTGGATTCATCAATAAGGTTATATGAAAACTGTTGGAGCCTCAAGAATCATTTATTCGGCTATTATTTCAAATGACGTCGATTTGAACACCTAATCTGTAGCGGAGTTATATCACTTTGCTTTCAGTAGCTATAAAGTTACAACTTAAATACGTTGAAATTTAGACAAACTGAATCGCCCTGAAACCTGACAGGAACTCACGGAGCATCAGCGCAGGTGCAAATGCATGGTGAAGGAATGACATGTTGAAGGAGGAAGACTACTCCAGCCTCTGCAGAAATCGCCCTTCCACGATTACTGTAAATTAGTAGATTTCTTGGTTGAAAGGTAGTAAAAGGTAAATTGCTGTTTTTGCTATAATATTGTATTCTCTTTGGTTCTAAAGAAAATATCAACCTTGTAATGCATGCATTCAAATATATTGCATTCGTACGCAATAAGCAGGTGTAACAAAATGTGGGGAACTGCTCTCCTTTCTTTTTTTTCTTTCTTTTTTT

mRNA sequence

ACTCCCAAGCAGATGCAGTCCACAACTGGTGCTGGTGCTACTGGTAGTCGTAGCTCCGGCGGCGGTACCGGCGGTGGCCTCGCTCGCTTCCGCTCTGCCCCTGCCGCCTGGTTGGAAGCGCTTTTGGAGGACGACGAGGAGGACCCTCTCAAGCCCAATCACTGCTTGACTCAGCTTCTCGCCGCCGACTCCTCCGACCTCGACTCTCCCGCTGATCAGCCCTTGTTCGACCCCAATCCCTCCCCGGCCTTCCACAGACAGAATAGCTCTCCCGCCGAGTTTCTCGCCGCCTCTGGAATTGGGGAAGGATTTTACACTGCCTATGCTCTCAATTCCTCCCCCACTCTTGACATCTCTCCCACCTCCAAGCGAGCTAGAGAAGTCGACCCCCAAAACTTCTCCCCCAAATTTTCACCTCAACTGAAAAGGGAAGGAAGTGGAGTTTCCAGTTTAATAGACATGGAAATGGAGAAGTTATTGGAGGACTCTGTGCCCTGCCGGGTAAGGGCCAAGCGTGGCTGTGCGACGCATCCTCGGAGCATTGCGGAGAGGGTTCGTAGGACTAGAATTAGTGACAGAATAAGGAAGCTTCAGGAGGTTGTCCCCAACATGGATAAGCAAACAAACACTGCAGATATGTTAGAAGAAGCAGTAGAGTATGTCAAATTCCTTCAAAAGCAAATTCAGGAACTCACGGAGCATCAGCGCAGGTGCAAATGCATGGTGAAGGAATGACATGTTGAAGGAGGAAGACTACTCCAGCCTCTGCAGAAATCGCCCTTCCACGATTACTGTAAATTAGTAGATTTCTTGGTTGAAAGGTAGTAAAAGGTAAATTGCTGTTTTTGCTATAATATTGTATTCTCTTTGGTTCTAAAGAAAATATCAACCTTGTAATGCATGCATTCAAATATATTGCATTCGTACGCAATAAGCAGGTGTAACAAAATGTGGGGAACTGCTCTCCTTTCTTTTTTTTCTTTCTTTTTTT

Coding sequence (CDS)

ATGCAGTCCACAACTGGTGCTGGTGCTACTGGTAGTCGTAGCTCCGGCGGCGGTACCGGCGGTGGCCTCGCTCGCTTCCGCTCTGCCCCTGCCGCCTGGTTGGAAGCGCTTTTGGAGGACGACGAGGAGGACCCTCTCAAGCCCAATCACTGCTTGACTCAGCTTCTCGCCGCCGACTCCTCCGACCTCGACTCTCCCGCTGATCAGCCCTTGTTCGACCCCAATCCCTCCCCGGCCTTCCACAGACAGAATAGCTCTCCCGCCGAGTTTCTCGCCGCCTCTGGAATTGGGGAAGGATTTTACACTGCCTATGCTCTCAATTCCTCCCCCACTCTTGACATCTCTCCCACCTCCAAGCGAGCTAGAGAAGTCGACCCCCAAAACTTCTCCCCCAAATTTTCACCTCAACTGAAAAGGGAAGGAAGTGGAGTTTCCAGTTTAATAGACATGGAAATGGAGAAGTTATTGGAGGACTCTGTGCCCTGCCGGGTAAGGGCCAAGCGTGGCTGTGCGACGCATCCTCGGAGCATTGCGGAGAGGGTTCGTAGGACTAGAATTAGTGACAGAATAAGGAAGCTTCAGGAGGTTGTCCCCAACATGGATAAGCAAACAAACACTGCAGATATGTTAGAAGAAGCAGTAGAGTATGTCAAATTCCTTCAAAAGCAAATTCAGGAACTCACGGAGCATCAGCGCAGGTGCAAATGCATGGTGAAGGAATGA

Protein sequence

MQSTTGAGATGSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGFYTAYALNSSPTLDISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE
Homology
[Close]
BLAST of ClCG08G000260 vs. Swiss-Prot
Match: BH080_ARATH (Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.7e-72
Identity = 155/265 (58.49%), Postives = 186/265 (70.19%), Query Frame = 1 

Query: 1   MQSTTGAGATGSRSSGGGTGG-----GLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQL 60
           MQST  +G  GS   GGG GG     GL+R RSAPA W+E LLE+DEE+ LKPN CLT+L
Sbjct: 1   MQSTHISG--GSSGGGGGGGGEVSRSGLSRIRSAPATWIETLLEEDEEEGLKPNLCLTEL 60

Query: 61  LAA------------DSSDLDSPADQPLFDPNPSPAFHRQNSSPAEFLAASGIG-EGFYT 120
           L              DS +  S  +Q L++ +    FHRQNSSPA+FL+ SG G +G+++
Sbjct: 61  LTGNNNSGGVITSRDDSFEFLSSVEQGLYNHHQGGGFHRQNSSPADFLSGSGSGTDGYFS 120

Query: 121 AYALNS-----SPTLDISPTSKRAREVDPQNFSPKFSPQLKRE--GSGVSSLIDMEMEKL 180
            + + +     S  +DISPT KR+R+++ Q     FS QLK E    G+S ++DM M+K+
Sbjct: 121 NFGIPANYDYLSTNVDISPT-KRSRDMETQ-----FSSQLKEEQMSGGISGMMDMNMDKI 180

Query: 181 LEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVE 240
            EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIR+LQE+VPNMDKQTNTADMLEEAVE
Sbjct: 181 FEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVE 240

[Close]
BLAST of ClCG08G000260 vs. Swiss-Prot
Match: BH081_ARATH (Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.5e-71
Identity = 152/263 (57.79%), Postives = 182/263 (69.20%), Query Frame = 1 

Query: 5   TGAGATGSRSSGGGTGGG-------LARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLA 64
           T  G++G    GGG GGG       L+R RSAPA WLEALLE+DEE+ LKPN  LT LL 
Sbjct: 4   TSVGSSGGGDDGGGRGGGGGLSRSGLSRIRSAPATWLEALLEEDEEESLKPNLGLTDLLT 63

Query: 65  ADSSDLDS---------PADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGFYTAYALNS 124
            +S+DL +         P +Q L+       FHRQNS+PA+FL+ S   +GF  ++ + +
Sbjct: 64  GNSNDLPTSRGSFEFPIPVEQGLYQQG---GFHRQNSTPADFLSGS---DGFIQSFGIQA 123

Query: 125 -----SPTLDISPTSKRAREVDPQNFSPKFSPQLKREGS------GVSSLIDMEMEKLLE 184
                S  +D+SP SKR+RE++    SP+F+ Q+K E S      GVSS+ DM ME L+E
Sbjct: 124 NYDYLSGNIDVSPGSKRSREMEALFSSPEFTSQMKGEQSSGQVPTGVSSMSDMNMENLME 183

Query: 185 DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYV 241
           DSV  RVRAKRGCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADMLEEAVEYV
Sbjct: 184 DSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYV 243

[Close]
BLAST of ClCG08G000260 vs. Swiss-Prot
Match: BH130_ARATH (Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.6e-32
Identity = 65/104 (62.50%), Postives = 83/104 (79.81%), Query Frame = 1 

Query: 137 LKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEV 196
           L +  S  S ++ ++    L+DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQE+
Sbjct: 252 LPKSSSTASDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 311

Query: 197 VPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE 241
           VPNMDKQTNT+DML+ AV+Y+K LQ+Q + L +++  CKCM KE
Sbjct: 312 VPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNKE 355


HSP 2 Score: 32.7 bits (73), Expect = 6.7e+00
Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 1 

Query: 19 TGGGLARFRSAPAAWLEALLEDDE 43
          TG GL RFRSAP++ L A ++DD+
Sbjct: 13 TGSGLLRFRSAPSSVLAAFVDDDK 36

[Close]
BLAST of ClCG08G000260 vs. Swiss-Prot
Match: BH122_ARATH (Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.6e-30
Identity = 65/102 (63.73%), Postives = 81/102 (79.41%), Query Frame = 1 

Query: 135 PQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ 194
           P L    S   SL D+  E+LL DS+PC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQ
Sbjct: 277 PPLAHHMSLPKSLSDI--EQLLSDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQ 336

Query: 195 EVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 237
           ++VPNMD QTNTADML+ AV+Y+K LQ+Q++ L E + RC+C
Sbjct: 337 DLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRC 376

[Close]
BLAST of ClCG08G000260 vs. Swiss-Prot
Match: BH128_ARATH (Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.2e-27
Identity = 93/247 (37.65%), Postives = 122/247 (49.39%), Query Frame = 1 

Query: 12  SRSSGGGTGGG---LARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPA- 71
           S   GGG   G   LAR RS+PA +   L  D      K N  L Q  +  S    S   
Sbjct: 125 SNDIGGGNSSGSYSLARQRSSPADFFTYLASD------KNNFSLNQPTSDYSPQGGSNGG 184

Query: 72  -------DQPLFDPNPSPA-FHRQNSSPAEFLAASGIGEGFYTAYALNS------SPTLD 131
                   Q  F  + S A  +  N +P    +        + A   +S      S    
Sbjct: 185 RGHSRLKSQLSFTNHDSLARINEVNETPVHDGSGHSFSAASFGAATTDSWDDGSGSIGFT 244

Query: 132 ISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATH 191
           ++  SKR++++D   FS    P      S  S        +L EDSVPC++RAKRGCATH
Sbjct: 245 VTRPSKRSKDMDSGLFSQYSLP------SDTSMNYMDNFMQLPEDSVPCKIRAKRGCATH 304

Query: 192 PRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRR 241
           PRSIAER RRTRIS +++KLQ++VPNMDKQT+ +DML+ AV+++K LQ Q+Q L + Q  
Sbjct: 305 PRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQEN 359


HSP 2 Score: 31.2 bits (69), Expect = 1.9e+01
Identity = 15/39 (38.46%), Postives = 25/39 (64.10%), Query Frame = 1 

Query: 2  QSTTGAGATGSRSSGGGTGGGLARFRSAPAAWLEALLED 41
          QS++   ++  RSS  G GGGL R+ SAP ++L +++++
Sbjct: 3  QSSSSTSSSSQRSSLPG-GGGLIRYGSAPGSFLNSVVDE 40

[Close]
BLAST of ClCG08G000260 vs. TrEMBL
Match: A0A0A0KY01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652220 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 1.3e-114
Identity = 215/244 (88.11%), Postives = 223/244 (91.39%), Query Frame = 1 

Query: 1   MQSTTGAGATGSRSSGGGT---GGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLA 60
           MQSTTGA +T + ++   T   G GLARFRSAPAAWLEALLEDDEEDPLKPN CLTQLLA
Sbjct: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60

Query: 61  ADSSDLDS-PADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGFYTAYALNSSPTLDISP 120
           A+SSDLDS PAD PLFDPNPSPAFHRQNSSP EFLA SGI EGFYT+Y LNSSPTLDISP
Sbjct: 61  ANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120

Query: 121 TSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180
           TSK + +VD QNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS
Sbjct: 121 TSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180

Query: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240
           IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC
Sbjct: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240

[Close]
BLAST of ClCG08G000260 vs. TrEMBL
Match: A0A061FKW9_THECC (Basic helix-loop-helix DNA-binding superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_036484 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 8.5e-79
Identity = 167/259 (64.48%), Postives = 191/259 (73.75%), Query Frame = 1 

Query: 8   GATGSRSSGGGTGG-----GLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAA---- 67
           G +GS S GGG GG     GLARFRSAPA WLEALLE++EEDPLKPN CLTQLL A    
Sbjct: 6   GGSGSSSGGGGGGGELSRGGLARFRSAPATWLEALLEEEEEDPLKPNQCLTQLLTANSTT 65

Query: 68  ----DSSDLDSPADQP-LFDPNPSPAFHRQNSSPAEFLA--ASGIGEGFYTAYALNS--- 127
               DS    S AD   LF+P     F RQNSSPA+FL   +    + +++ + + +   
Sbjct: 66  PATRDSGPFSSSADPAGLFEPT---GFQRQNSSPADFLGNNSGAASDAYFSNFGIPANYD 125

Query: 128 --SPTLDISPTSKRAREVDPQNFSPKFSPQLKRE-----GSGVSSLIDMEMEKLLEDSVP 187
             SP +D SP+SKRARE+D Q    KF  QLK E      SGVS+LID++MEKLLEDSVP
Sbjct: 126 YLSPNIDASPSSKRARELDTQYPPTKFQSQLKGEQRGQISSGVSNLIDVDMEKLLEDSVP 185

Query: 188 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQ 241
           CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADML+EAVEYVK+LQ
Sbjct: 186 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVEYVKYLQ 245

[Close]
BLAST of ClCG08G000260 vs. TrEMBL
Match: A0A0B0NRZ3_GOSAR (Transcription factor bHLH80-like protein OS=Gossypium arboreum GN=F383_04086 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.0e-76
Identity = 157/259 (60.62%), Postives = 191/259 (73.75%), Query Frame = 1 

Query: 1   MQSTTGAGATGSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADS 60
           M+ T G  ++ S     G+  GLARFRSAPA WLEALLE++EEDPLKP+ CLTQLL  +S
Sbjct: 1   MKPTPGGSSSSSGGGAEGSRAGLARFRSAPATWLEALLEEEEEDPLKPSQCLTQLLTGNS 60

Query: 61  SDLDSPADQPLFDPNPSPA-------FHRQNSSPAEFLA--ASGIGEGFYTAYALNS--- 120
           S   +  +  LF  +  P+       F RQNSSPA+FL    +   + +++ + + +   
Sbjct: 61  SSTPTIRNSLLFPNSADPSGLFEPSGFQRQNSSPADFLGNNPAAASDAYFSNFGVAANYD 120

Query: 121 --SPTLDISPTSKRAREVDPQNFSPKFSPQLKREGS-----GVSSLIDMEMEKLLEDSVP 180
             SPT+D+SP+SKRA E+D Q    KF  QLK E S     G+S+LID++MEKLLEDSVP
Sbjct: 121 YLSPTMDVSPSSKRASELDTQFPPTKFHSQLKGEPSDQISGGISNLIDVDMEKLLEDSVP 180

Query: 181 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQ 240
           CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADMLEEAVEYVK+LQ
Sbjct: 181 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKYLQ 240

[Close]
BLAST of ClCG08G000260 vs. TrEMBL
Match: A0A0D2S5I7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G138300 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.4e-75
Identity = 155/259 (59.85%), Postives = 190/259 (73.36%), Query Frame = 1 

Query: 1   MQSTTGAGATGSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADS 60
           M+ T G  ++ S     G+  GLARFRSAPA WLEALLE++EEDPLKP+ CLTQLL  +S
Sbjct: 1   MKPTPGGSSSSSGGGAEGSRAGLARFRSAPATWLEALLEEEEEDPLKPSQCLTQLLTGNS 60

Query: 61  SDLDSPADQPLFDPNPSPA-------FHRQNSSPAEFLA--ASGIGEGFYTAYALNS--- 120
           +   +  +  LF  +  P+       F RQNSSPA+F     +   + +++ + + +   
Sbjct: 61  TSTPTIRNSLLFPNSAYPSGLFEPSGFQRQNSSPADFPGNNPAASSDAYFSNFGVVANYD 120

Query: 121 --SPTLDISPTSKRAREVDPQNFSPKFSPQLKREGS-----GVSSLIDMEMEKLLEDSVP 180
             SPT+D+SP+SKRA E+D Q    KF  QLK E S     G+S+LID++MEKLLEDSVP
Sbjct: 121 YLSPTMDVSPSSKRASELDTQFPPTKFHSQLKGEPSDQISGGISNLIDVDMEKLLEDSVP 180

Query: 181 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQ 240
           CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADMLEEAVEYVK+LQ
Sbjct: 181 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKYLQ 240

[Close]
BLAST of ClCG08G000260 vs. TrEMBL
Match: A0A087GD52_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G431300 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 6.3e-74
Identity = 158/247 (63.97%), Postives = 182/247 (73.68%), Query Frame = 1 

Query: 1   MQSTTGAGATGSRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADS 60
           MQST   G     +SGGG G GLAR RSAPA W+E LLEDDEED LKPN CLT+LL  +S
Sbjct: 1   MQSTHVGG-----NSGGGGGSGLARIRSAPANWIETLLEDDEEDALKPNLCLTELLTGNS 60

Query: 61  SDLDSPADQPLFDP---NPSPAFHRQNSSPAEFLAASGIG-EGFYTAYALNSS-PTLDIS 120
            ++ S        P   N    FHRQNSSPA+FL+ SG G +GF++ + + +S   +D+S
Sbjct: 61  GEITSRDSFEFPSPVEYNHQGGFHRQNSSPADFLSGSGAGSDGFFSNFGIPASYDYVDMS 120

Query: 121 PTSKRAREVDPQNFSPKFSPQLKRE--GSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATH 180
           P SKR+RE+D       FS Q+K E    GVS ++DM M+KLLEDSVPCRVRAKRGCATH
Sbjct: 121 PVSKRSREMDAH-----FSSQMKEEEMSGGVSGMMDMNMDKLLEDSVPCRVRAKRGCATH 180

Query: 181 PRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRR 240
           PRSIAERVRRTRISDRIR+LQE+VPNMDKQTNTADMLEEAVEYVK LQ QIQELTE QRR
Sbjct: 181 PRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQELTEQQRR 237

[Close]
BLAST of ClCG08G000260 vs. TAIR10
Match: AT1G35460.1 (AT1G35460.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 273.9 bits (699), Expect = 9.7e-74
Identity = 155/265 (58.49%), Postives = 186/265 (70.19%), Query Frame = 1 

Query: 1   MQSTTGAGATGSRSSGGGTGG-----GLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQL 60
           MQST  +G  GS   GGG GG     GL+R RSAPA W+E LLE+DEE+ LKPN CLT+L
Sbjct: 1   MQSTHISG--GSSGGGGGGGGEVSRSGLSRIRSAPATWIETLLEEDEEEGLKPNLCLTEL 60

Query: 61  LAA------------DSSDLDSPADQPLFDPNPSPAFHRQNSSPAEFLAASGIG-EGFYT 120
           L              DS +  S  +Q L++ +    FHRQNSSPA+FL+ SG G +G+++
Sbjct: 61  LTGNNNSGGVITSRDDSFEFLSSVEQGLYNHHQGGGFHRQNSSPADFLSGSGSGTDGYFS 120

Query: 121 AYALNS-----SPTLDISPTSKRAREVDPQNFSPKFSPQLKRE--GSGVSSLIDMEMEKL 180
            + + +     S  +DISPT KR+R+++ Q     FS QLK E    G+S ++DM M+K+
Sbjct: 121 NFGIPANYDYLSTNVDISPT-KRSRDMETQ-----FSSQLKEEQMSGGISGMMDMNMDKI 180

Query: 181 LEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVE 240
            EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIR+LQE+VPNMDKQTNTADMLEEAVE
Sbjct: 181 FEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVE 240

[Close]
BLAST of ClCG08G000260 vs. TAIR10
Match: AT4G09180.1 (AT4G09180.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 270.0 bits (689), Expect = 1.4e-72
Identity = 152/263 (57.79%), Postives = 182/263 (69.20%), Query Frame = 1 

Query: 5   TGAGATGSRSSGGGTGGG-------LARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLA 64
           T  G++G    GGG GGG       L+R RSAPA WLEALLE+DEE+ LKPN  LT LL 
Sbjct: 4   TSVGSSGGGDDGGGRGGGGGLSRSGLSRIRSAPATWLEALLEEDEEESLKPNLGLTDLLT 63

Query: 65  ADSSDLDS---------PADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGFYTAYALNS 124
            +S+DL +         P +Q L+       FHRQNS+PA+FL+ S   +GF  ++ + +
Sbjct: 64  GNSNDLPTSRGSFEFPIPVEQGLYQQG---GFHRQNSTPADFLSGS---DGFIQSFGIQA 123

Query: 125 -----SPTLDISPTSKRAREVDPQNFSPKFSPQLKREGS------GVSSLIDMEMEKLLE 184
                S  +D+SP SKR+RE++    SP+F+ Q+K E S      GVSS+ DM ME L+E
Sbjct: 124 NYDYLSGNIDVSPGSKRSREMEALFSSPEFTSQMKGEQSSGQVPTGVSSMSDMNMENLME 183

Query: 185 DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYV 241
           DSV  RVRAKRGCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADMLEEAVEYV
Sbjct: 184 DSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYV 243

[Close]
BLAST of ClCG08G000260 vs. TAIR10
Match: AT2G42280.1 (AT2G42280.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 139.0 bits (349), Expect = 3.7e-33
Identity = 65/104 (62.50%), Postives = 83/104 (79.81%), Query Frame = 1 

Query: 137 LKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEV 196
           L +  S  S ++ ++    L+DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQE+
Sbjct: 252 LPKSSSTASDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 311

Query: 197 VPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE 241
           VPNMDKQTNT+DML+ AV+Y+K LQ+Q + L +++  CKCM KE
Sbjct: 312 VPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNKE 355


HSP 2 Score: 32.7 bits (73), Expect = 3.7e-01
Identity = 14/24 (58.33%), Postives = 17/24 (70.83%), Query Frame = 1 

Query: 19 TGGGLARFRSAPAAWLEALLEDDE 43
          TG GL RFRSAP++ L A ++DD+
Sbjct: 13 TGSGLLRFRSAPSSVLAAFVDDDK 36

[Close]
BLAST of ClCG08G000260 vs. TAIR10
Match: AT1G51140.1 (AT1G51140.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 133.3 bits (334), Expect = 2.0e-31
Identity = 65/102 (63.73%), Postives = 81/102 (79.41%), Query Frame = 1 

Query: 135 PQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ 194
           P L    S   SL D+  E+LL DS+PC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQ
Sbjct: 277 PPLAHHMSLPKSLSDI--EQLLSDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQ 336

Query: 195 EVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 237
           ++VPNMD QTNTADML+ AV+Y+K LQ+Q++ L E + RC+C
Sbjct: 337 DLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRC 376

[Close]
BLAST of ClCG08G000260 vs. TAIR10
Match: AT1G05805.1 (AT1G05805.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-28
Identity = 93/247 (37.65%), Postives = 122/247 (49.39%), Query Frame = 1 

Query: 12  SRSSGGGTGGG---LARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAADSSDLDSPA- 71
           S   GGG   G   LAR RS+PA +   L  D      K N  L Q  +  S    S   
Sbjct: 125 SNDIGGGNSSGSYSLARQRSSPADFFTYLASD------KNNFSLNQPTSDYSPQGGSNGG 184

Query: 72  -------DQPLFDPNPSPA-FHRQNSSPAEFLAASGIGEGFYTAYALNS------SPTLD 131
                   Q  F  + S A  +  N +P    +        + A   +S      S    
Sbjct: 185 RGHSRLKSQLSFTNHDSLARINEVNETPVHDGSGHSFSAASFGAATTDSWDDGSGSIGFT 244

Query: 132 ISPTSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATH 191
           ++  SKR++++D   FS    P      S  S        +L EDSVPC++RAKRGCATH
Sbjct: 245 VTRPSKRSKDMDSGLFSQYSLP------SDTSMNYMDNFMQLPEDSVPCKIRAKRGCATH 304

Query: 192 PRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRR 241
           PRSIAER RRTRIS +++KLQ++VPNMDKQT+ +DML+ AV+++K LQ Q+Q L + Q  
Sbjct: 305 PRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQEN 359


HSP 2 Score: 31.2 bits (69), Expect = 1.1e+00
Identity = 15/39 (38.46%), Postives = 25/39 (64.10%), Query Frame = 1 

Query: 2  QSTTGAGATGSRSSGGGTGGGLARFRSAPAAWLEALLED 41
          QS++   ++  RSS  G GGGL R+ SAP ++L +++++
Sbjct: 3  QSSSSTSSSSQRSSLPG-GGGLIRYGSAPGSFLNSVVDE 40

[Close]
BLAST of ClCG08G000260 vs. NCBI nr
Match: gi|449447621|ref|XP_004141566.1| (PREDICTED: transcription factor bHLH81 isoform X1 [Cucumis sativus])

HSP 1 Score: 420.6 bits (1080), Expect = 1.8e-114
Identity = 215/244 (88.11%), Postives = 223/244 (91.39%), Query Frame = 1 

Query: 1   MQSTTGAGATGSRSSGGGT---GGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLA 60
           MQSTTGA +T + ++   T   G GLARFRSAPAAWLEALLEDDEEDPLKPN CLTQLLA
Sbjct: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60

Query: 61  ADSSDLDS-PADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGFYTAYALNSSPTLDISP 120
           A+SSDLDS PAD PLFDPNPSPAFHRQNSSP EFLA SGI EGFYT+Y LNSSPTLDISP
Sbjct: 61  ANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120

Query: 121 TSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180
           TSK + +VD QNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS
Sbjct: 121 TSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180

Query: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240
           IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC
Sbjct: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240

[Close]
BLAST of ClCG08G000260 vs. NCBI nr
Match: gi|659119475|ref|XP_008459678.1| (PREDICTED: transcription factor bHLH80 isoform X1 [Cucumis melo])

HSP 1 Score: 420.6 bits (1080), Expect = 1.8e-114
Identity = 219/244 (89.75%), Postives = 223/244 (91.39%), Query Frame = 1 

Query: 1   MQSTTGAGATG---SRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLA 60
           MQSTTGA AT    SR+SGGG G  LARFRSAPAAWLEALLEDDEEDPLKPN CLTQLLA
Sbjct: 1   MQSTTGAAATATASSRTSGGGPG--LARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60

Query: 61  ADSSDLDS-PADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGFYTAYALNSSPTLDISP 120
           A+SSDL S P D PLFDPNPSPAFHRQNSSP EFLA SGI EGFYT+Y LNSSPTLDISP
Sbjct: 61  ANSSDLVSAPGDHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120

Query: 121 TSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180
           TSK A +VD QNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS
Sbjct: 121 TSKPATDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180

Query: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240
           IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC
Sbjct: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240

[Close]
BLAST of ClCG08G000260 vs. NCBI nr
Match: gi|778708105|ref|XP_011656122.1| (PREDICTED: transcription factor bHLH81 isoform X2 [Cucumis sativus])

HSP 1 Score: 366.3 bits (939), Expect = 4.1e-98
Identity = 193/244 (79.10%), Postives = 201/244 (82.38%), Query Frame = 1 

Query: 1   MQSTTGAGATGSRSSGGGT---GGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLA 60
           MQSTTGA +T + ++   T   G GLARFRSAPAAWLEALLEDDEEDPLKPN CLTQLLA
Sbjct: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60

Query: 61  ADSSDLDS-PADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGFYTAYALNSSPTLDISP 120
           A+SSDLDS PAD PLFDPNPSPAFHRQNSSP EFLA SGI EGFYT+Y LNSSPTLDISP
Sbjct: 61  ANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120

Query: 121 TSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180
           TSK + +VD QNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS
Sbjct: 121 TSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180

Query: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240
           IAER                      QTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC
Sbjct: 181 IAER----------------------QTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 222

[Close]
BLAST of ClCG08G000260 vs. NCBI nr
Match: gi|659119477|ref|XP_008459679.1| (PREDICTED: transcription factor bHLH80 isoform X2 [Cucumis melo])

HSP 1 Score: 366.3 bits (939), Expect = 4.1e-98
Identity = 197/244 (80.74%), Postives = 201/244 (82.38%), Query Frame = 1 

Query: 1   MQSTTGAGATG---SRSSGGGTGGGLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLA 60
           MQSTTGA AT    SR+SGGG G  LARFRSAPAAWLEALLEDDEEDPLKPN CLTQLLA
Sbjct: 1   MQSTTGAAATATASSRTSGGGPG--LARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60

Query: 61  ADSSDLDS-PADQPLFDPNPSPAFHRQNSSPAEFLAASGIGEGFYTAYALNSSPTLDISP 120
           A+SSDL S P D PLFDPNPSPAFHRQNSSP EFLA SGI EGFYT+Y LNSSPTLDISP
Sbjct: 61  ANSSDLVSAPGDHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120

Query: 121 TSKRAREVDPQNFSPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180
           TSK A +VD QNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS
Sbjct: 121 TSKPATDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180

Query: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240
           IAER                      QTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC
Sbjct: 181 IAER----------------------QTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 220

[Close]
BLAST of ClCG08G000260 vs. NCBI nr
Match: gi|590603789|ref|XP_007020097.1| (Basic helix-loop-helix DNA-binding superfamily protein isoform 2 [Theobroma cacao])

HSP 1 Score: 301.6 bits (771), Expect = 1.2e-78
Identity = 167/259 (64.48%), Postives = 191/259 (73.75%), Query Frame = 1 

Query: 8   GATGSRSSGGGTGG-----GLARFRSAPAAWLEALLEDDEEDPLKPNHCLTQLLAA---- 67
           G +GS S GGG GG     GLARFRSAPA WLEALLE++EEDPLKPN CLTQLL A    
Sbjct: 6   GGSGSSSGGGGGGGELSRGGLARFRSAPATWLEALLEEEEEDPLKPNQCLTQLLTANSTT 65

Query: 68  ----DSSDLDSPADQP-LFDPNPSPAFHRQNSSPAEFLA--ASGIGEGFYTAYALNS--- 127
               DS    S AD   LF+P     F RQNSSPA+FL   +    + +++ + + +   
Sbjct: 66  PATRDSGPFSSSADPAGLFEPT---GFQRQNSSPADFLGNNSGAASDAYFSNFGIPANYD 125

Query: 128 --SPTLDISPTSKRAREVDPQNFSPKFSPQLKRE-----GSGVSSLIDMEMEKLLEDSVP 187
             SP +D SP+SKRARE+D Q    KF  QLK E      SGVS+LID++MEKLLEDSVP
Sbjct: 126 YLSPNIDASPSSKRARELDTQYPPTKFQSQLKGEQRGQISSGVSNLIDVDMEKLLEDSVP 185

Query: 188 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQ 241
           CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADML+EAVEYVK+LQ
Sbjct: 186 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVEYVKYLQ 245

The following BLAST results are available for this feature:
BLAST of ClCG08G000260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH080_ARATH1.7e-7258.49Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=2 SV=1[more]
BH081_ARATH2.5e-7157.79Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2 SV=1[more]
BH130_ARATH6.6e-3262.50Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130 PE=1 SV=1[more]
BH122_ARATH3.6e-3063.73Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122 PE=1 SV=1[more]
BH128_ARATH2.2e-2737.65Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128 PE=1 SV=1[more]
BLAST of ClCG08G000260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY01_CUCSA1.3e-11488.11Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652220 PE=4 SV=1[more]
A0A061FKW9_THECC8.5e-7964.48Basic helix-loop-helix DNA-binding superfamily protein isoform 2 OS=Theobroma ca... [more]
A0A0B0NRZ3_GOSAR1.0e-7660.62Transcription factor bHLH80-like protein OS=Gossypium arboreum GN=F383_04086 PE=... [more]
A0A0D2S5I7_GOSRA4.4e-7559.85Uncharacterized protein OS=Gossypium raimondii GN=B456_013G138300 PE=4 SV=1[more]
A0A087GD52_ARAAL6.3e-7463.97Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G431300 PE=4 SV=1[more]
BLAST of ClCG08G000260 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G35460.19.7e-7458.49 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G09180.11.4e-7257.79 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT2G42280.13.7e-3362.50 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G51140.12.0e-3163.73 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G05805.11.2e-2837.65 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of ClCG08G000260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449447621|ref|XP_004141566.1|1.8e-11488.11PREDICTED: transcription factor bHLH81 isoform X1 [Cucumis sativus][more]
gi|659119475|ref|XP_008459678.1|1.8e-11489.75PREDICTED: transcription factor bHLH80 isoform X1 [Cucumis melo][more]
gi|778708105|ref|XP_011656122.1|4.1e-9879.10PREDICTED: transcription factor bHLH81 isoform X2 [Cucumis sativus][more]
gi|659119477|ref|XP_008459679.1|4.1e-9880.74PREDICTED: transcription factor bHLH80 isoform X2 [Cucumis melo][more]
gi|590603789|ref|XP_007020097.1|1.2e-7864.48Basic helix-loop-helix DNA-binding superfamily protein isoform 2 [Theobroma caca... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
biological_process GO:0042335 cuticle development
biological_process GO:0006366 transcription from RNA polymerase II promoter
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0001046 core promoter sequence-specific DNA binding
molecular_function GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G000260.1ClCG08G000260.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 175..234
score: 2.9
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 176..221
score: 7.8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 176..226
score: 4.1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 170..220
score: 14
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 173..237
score: 1.19
NoneNo IPR availableunknownCoilCoilcoord: 210..230
scor
NoneNo IPR availablePANTHERPTHR16223FAMILY NOT NAMEDcoord: 1..240
score: 2.1
NoneNo IPR availablePANTHERPTHR16223:SF36SUBFAMILY NOT NAMEDcoord: 1..240
score: 2.1