CmaCh09G012210 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G012210
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Location	Cma_Chr09 : 8127541 .. 8133151 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAGTGACCCTTTCCAAAGATAGAATTTCTCCACCAAAAGCAGCGGCGGAGTTTTCCTTTTCTTCTCTTCCAGAAATAACGAAAAACTACAAAATTCAGCAGAAATCTCCTGAGCCAGTCACCGTGAAGCAGATGCAATCCACAACTGGTGGTGCTACTGGCAGTCGTAGCAGCGGCGGCGGACTTGCTCGCTTCCGCTCTGCTCCGGCTGCTTGGTTGGAAGCGCTTTTGGAGGACGAGGAGGAGGACCTACTCAGGCCTAATCAGTGCTTGACTCAGCTTCTCGCTGGAAACTCCTCCGACCTAGACTCCCCTGCGGATCAGGCCTTGTTCGAGCCCAATCCCTCCGCTGGTTTCCAGAGGCAAAATAGCTCTCCGGCTGAGTTTCTCGGCGCCTCCGGAATCGGGGAAGGATTTTACTCTTCCTATGCTATCAATTCCTCGGCCGCACTCGAGATCTCTCCCACTTCCAAGCGGGGGAGAGAAGTCGACGCGCAGAACTTCCCGCCCAAATTTTCACCGCAACTGGTAATCATTTTATTTCGAACCTCTGTTTCGCGATTCCCTGTCTTGAGGATTTGAAACGATTTGATTTCGGATTACTTCTGTTTTGATTATGGTCTCCCGATTAGAAGTTTATTTTGGTTTCGTTTTTGGCAGAAAAGGGAAGGAAGTGGAGTATCGAGTTTGATAGACATGGAAATGGAGAAGTTATTGGAGGACTCCGTGCCCTGCCGTGTGAGGGCCAAGCGTGGCTGTGCGACGCATCCTCGGAGCATTGCTGAGAGGGTTAGTTCCTTTTCGCCTAAATCTTCGTTGACTAATTGCTTCTTTCAACTTCCACTTTTCAATACCCAATCTCACCTGTTCATAACTTCTGTGACATTCTTCACTGTAATAATTCGACATGGATTCCTTGCCTCTTCTGATCATTCATCATCTCAGCTCTGCCTTTGTGTCTATTTGAAACTTCGATTTAAAATGTTTTCTATCACACTCTTATAAACAATTATTCGTTTTCCTCCCCAACCGTCGTACGATCTCACAATCCACCCACCTGACACTCGTTCCCTTCTCCCATCGATGTGGGACACTCTGATACCATTTGTAACGGCTCAAGCCCACCCTAGTAGATATTGTCTCTTCGGGCTTTTCCTTTTTGTGTTAAAGTATTAATCATTAGACTAAGCAGTATGTCTTGTGAACAAAACACACACAACAAAAGGTATTTCTATTACTTATTGTTTGTTTTCTTGATGGTAGGTTCGTAGGACTAGAATTAGTGACAGAATAAGGAAGCTTCAGGAGGTTGTCCCCAACATGGATAAGGTAAATTGTATCATGATTGATCATTAGGGACGAATTTAGATTTATCTCATGTGATATATATTGATAAATGACTGTATTTTGTACTGCCATGTGTTTCTTCTTCCAGTTTCTGCCCTGAATTCCATTCTTAGCTTCTGTTTTGGCTAGAACTTTACTTTATGCTAATTAAGTCTAACATGTATATAATTAATTGAGTAATGGGGACAGTATTGTGTGGTTTGAACTGAAGGTCATCTCTTTCATTCATTTTAATTTTAAAGTTTACCAAATTTGTAACGGCCCAAGCCCAAGTCCTAGATATTGTCCTCTTTGGGTCCACGCTCTTATAAAAGATGTTTCGTTCTCCTCCTCAATCAATGTGGGATCTCACAATCCACCTCCTTCGGGGCAGCGTCTTCGCTAGCACTCGTTCCCTTCTCCAATTGATGTGGGACCTCAATCCACCACCTTTGGGGCTAGCGTCCTTGCTGGCACACAACCTCGTGTCCACCCACCTTCGGGGTTCAACCTCCTTGCTGGTACATTGTCCGGTGTCTGGGTTCTGATACCATCTATAACGGCCCAAGCCCACTAACAGATACTATCCTCTTTGGGTTTTTTCTTCCGCGCTTCCTTTCAAGGTTTTAAAATGTGTTTACTAAGGAGAGGTTTCCACATCTTACAAATGGTGTTTTGTTCTCCTCCCAAAATGATGCGGGATCTTACAAAATTTTACTAGAGTTAGTTTTAAACGGGGTGGCAAGTATGTTAGCTTAAGATTGGACGTGTGGCTGGGATTATTTACATTGAATATAGGCATCTGTTTGTCTATATGTTCACATGTGAGTATGAATGGAAGTATGCATTTATATGAGGCAGTCATGGCATGCTAATGTGATTTTGAAAGCCTACAATCCATAACTTATATCAAGGATGGAATGTTGAATATTTATAGGCCAATCGCTTCTCAGGTTTGAGTTTGTTTGAGTTTGACCTTGTAATAGCCCAAGTTCACTGTTAGCAGATGTTGTCCTTTTTGGGCTTTTTCTTTCGAGTTTTCTCCAAGGATTTTAAAATGTGTCTATTAGGGAGAAGTTTTCACACCCTTATAAGGAACTTTGTTCCCCTCTATAACCAATATAGGATCTCACTTATCTTCATAAGGAACATTTTAGTCCATGAAGTTAAGAAAATGGTTTAAGCGGTTCCATTTGACCATTAGTTGACTAATGAAAAAAATTGTGTGATTGTGTTTTACTAACTTGGTGAGTAACTTATGTGGCTAGAGATGTCCATTTATCCCTCAAATGGGATGAGGAATCTTTGTACAAATAGGAATGAGGAGGGAGTGGGAAAAGATTTTTTTCTCCTCTAAATGGGGTAGGGTATAGGGATTATATTCCCCATCCTCGCCAAATCCCCGCCCTTCTCAATATGGAATAATATGTGTAATATTAAAATTTGTGTTTTTAAAAATTATGTTAGAACATTGTATTATTTTTTTGCTTATGAAATTTTATTGAAGTTTTATTAGGATGTTTTGTATTATATTTTTTTGCTTATGAAATTTTATTGAAGTTTTATTAGGATGTTTTACTTATTTTTAATATAAATTATATTGAAAAATGAAAATTATCCATTAAAAAAATCATTGTAACTAATTTTTTTTTTCTTTTTTATAAAAATGTATAAAAAGATGGGGGAAAATTCCAATTCCGCAAATAGAATTCGTAACTCATTTCTTCCAAAATAAATAAAGAATTTTGCATGAATGAAAATTGAAATAGGCCGTCATAGACATCCCTATATGTTGCATATCTCTTTTCCATAGGGATGTTTATAGTAGGGTTCGGAGAGGCTTCTTCATCTCTATCCTCGCCACCTATTTCAATCTCGATCTTTGTGAAATTCTCTCATTTATTTTGGTGGGTATCAAATGAGCTCCCTTTTTTTATATATATTTCCTATTAAAAAAAATCATTTTACAGATTTTTTTAATAGATAATTGTTCATTTTTTTATATAATTTTTATTAAAAAATGTAAATCATCCTAATAAATTCATTAATATTTTATAAGCATAATTATATTCTAATGTAATGTTTTGCAAATCTAATTTAAATAAATCAAATTTCAATATTCAATATTACAATAAAAATCTTTAACATATTTAAATAAATGAAAGCAATATATATATATATATGTATATATAGTAGGTTAGTTTTGTGCTTACTGTGGCAAGGAATTAAGATATTCCTCAAGAAAGAAACCGTGGAGTTTATTGCTGAGGGAAATCCATGTGTGTTACTCGAAGGGTGTCATGAGTTAATGCATATAATAAGCCTTTTGTAACATCTCAAGTCCACCGCTGGCAGACATTGTCCTAGGCTTGCACTCAAGGTTTTTAAAACACTGTTAGGTAGAGGTTTCCACACCCTTATAATTCGTTCTCCTCCCCAACCGATGTGGGATCTCATAATCCACCCCACTTCGGAGTCCAACATCTTTGCTGGCACTAGTTCCTCCTCTTTAATCGATGTGAGACCCCCCAATCCACCCGCGTCTTTGTCGGCACACTGCCTCATGTTCACCCTTTTTCGGGGCTCAACTTTCTCGCTTGTCTAGCTCTAATACTGTCTGTAACAGCCTAAGTTCACCGCTAGCAGATATTGTACTCTTTGGAGTTTCTCTTTCGGGCTTCTCCTCAACGTTTTTAAAACGCGTCTGCTAGGGGGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCTCCTCCCCGACTGACATGGGATCTCACACCTTTAGTTTCTTTAATTTCTTTAAATTCTTCATTTCCCACTCTGATCCTATCTATCTGTAAACTAATTACCCAAAAGAGAAATTGCTGTAAACATGGGTTTTCTTCATGGTGTTTGTAACTCTTCTGAGACTATATCTGCATTCTGTTGATATTGAAAAAGAAATTATTATATCAATTAACTTATAAACCTGAAACCAAGATTTGCTTTATCGAATTTGTGAAACTTATATTTGACGAAGCCGAAATATAATTATCGTTCTGTGATTTTCGATCTTCTTGCAGCAAACAAACACTGCGGATATGTTGGAAGAAGCAGTAGAGTATGTCAAATTCCTTCAAAAGCAGATTCAGGTATGCAACTGAACTACATGCTGTCCTAGATTGTTCAATAGGTTATACGAAAACGGCTGATACTGTGAGGATTGTTGGGAGGGAGTCCCACGTTGACTAATTTAGGGAATGATCATGAGTTTATAAGTAAAGAAATACATGTCCATTGATATGAGACCTTTTGGGGAAGCCCAAAGTAAAGCCACGAGAGTTATGCTCAAAGTGGACAATGTCATACCATTGTGCAGAGTCGTGATTCCTAACATGATATTAGAGTCGTGATTCCTAACATGGTATTAGAGTCATGCTCTTAACTTAGTCATGTCAATAGAACCCTCAAATGTCGAACAAAGAAATTGTGAGCCTCGAAGGTGTAGTCAAAAGTGACTCAAGTGTCGAACAAATGATGTACTTTGTTCGAGGACTCCAGAGATGGAGTCAATCCTCCATTAAAAGGAGGCTGTTCGAAGGCTCCATAGGCCTTAGGGGAGGCTCTATAGTGTACGAGGGAGTCTCACATTGGCTAATTTAAGAATACATTTCCATTGGTATGAGGTCATTTGGGGAAGCCCAAAGCAAAACCACGAGAGCATATACTCAAAGTGGACAATTATCATACCATTGTACAGAGTCGTGATTCCTAATACTAATCTGTAGCAGAATTATATCACTTTGCTCGATTAGAGCTGTAAAGTTACAACTCAAATACCTCGAAATTTCAACTAACTGAAATCCCCTGAAACCCAACAGGAACTCACCGAGCATCAGCGCAGGTGCACATGCACGGTTAAGGAATAATGGCACGGAGGAAAACGCTACAACAGCCTGCAGAAATCGCCTTTCCACGATCAGTGTAAATTAGTAGATTTCTGAGGACTTGAAAAGTAGTATAAAGTAAATTAAAGTGTTTTAGCTATAATATTGTATTGTCTCTGGTCCTAAAGAAAATATCAACCTTGTAATGCATGCATTCAATATATTGCATTCGTACGCAATAAGCAGGTGTAACAAAATATTGGGTAGTCTGCTTTTTCCCCCTTTTTTGGGTATTTTTTGTTTTCTTTCAAAAAAATTATTGAATAGAACATTAGATCATTAGGCCTCTAATTATTGTATCTTCAACATCCATCCAATATTATCAGGAGAAAGCAATGGAATCGAAATTGCAAGATCAA

mRNA sequence

GTGAGTGACCCTTTCCAAAGATAGAATTTCTCCACCAAAAGCAGCGGCGGAGTTTTCCTTTTCTTCTCTTCCAGAAATAACGAAAAACTACAAAATTCAGCAGAAATCTCCTGAGCCAGTCACCGTGAAGCAGATGCAATCCACAACTGGTGGTGCTACTGGCAGTCGTAGCAGCGGCGGCGGACTTGCTCGCTTCCGCTCTGCTCCGGCTGCTTGGTTGGAAGCGCTTTTGGAGGACGAGGAGGAGGACCTACTCAGGCCTAATCAGTGCTTGACTCAGCTTCTCGCTGGAAACTCCTCCGACCTAGACTCCCCTGCGGATCAGGCCTTGTTCGAGCCCAATCCCTCCGCTGGTTTCCAGAGGCAAAATAGCTCTCCGGCTGAGTTTCTCGGCGCCTCCGGAATCGGGGAAGGATTTTACTCTTCCTATGCTATCAATTCCTCGGCCGCACTCGAGATCTCTCCCACTTCCAAGCGGGGGAGAGAAGTCGACGCGCAGAACTTCCCGCCCAAATTTTCACCGCAACTGAAAAGGGAAGGAAGTGGAGTATCGAGTTTGATAGACATGGAAATGGAGAAGTTATTGGAGGACTCCGTGCCCTGCCGTGTGAGGGCCAAGCGTGGCTGTGCGACGCATCCTCGGAGCATTGCTGAGAGGGTTCGTAGGACTAGAATTAGTGACAGAATAAGGAAGCTTCAGGAGGTTGTCCCCAACATGGATAAGCAAACAAACACTGCGGATATGTTGGAAGAAGCAGTAGAGTATGTCAAATTCCTTCAAAAGCAGATTCAGGAACTCACCGAGCATCAGCGCAGGTGCACATGCACGGTTAAGGAATAATGGCACGGAGGAAAACGCTACAACAGCCTGCAGAAATCGCCTTTCCACGATCAGTGTAAATTAGTAGATTTCTGAGGACTTGAAAAGTAGTATAAAGTAAATTAAAGTGTTTTAGCTATAATATTGTATTGTCTCTGGTCCTAAAGAAAATATCAACCTTGTAATGCATGCATTCAATATATTGCATTCGTACGCAATAAGCAGGTGTAACAAAATATTGGGTAGTCTGCTTTTTCCCCCTTTTTTGGGTATTTTTTGTTTTCTTTCAAAAAAATTATTGAATAGAACATTAGATCATTAGGCCTCTAATTATTGTATCTTCAACATCCATCCAATATTATCAGGAGAAAGCAATGGAATCGAAATTGCAAGATCAA

Coding sequence (CDS)

ATGCAATCCACAACTGGTGGTGCTACTGGCAGTCGTAGCAGCGGCGGCGGACTTGCTCGCTTCCGCTCTGCTCCGGCTGCTTGGTTGGAAGCGCTTTTGGAGGACGAGGAGGAGGACCTACTCAGGCCTAATCAGTGCTTGACTCAGCTTCTCGCTGGAAACTCCTCCGACCTAGACTCCCCTGCGGATCAGGCCTTGTTCGAGCCCAATCCCTCCGCTGGTTTCCAGAGGCAAAATAGCTCTCCGGCTGAGTTTCTCGGCGCCTCCGGAATCGGGGAAGGATTTTACTCTTCCTATGCTATCAATTCCTCGGCCGCACTCGAGATCTCTCCCACTTCCAAGCGGGGGAGAGAAGTCGACGCGCAGAACTTCCCGCCCAAATTTTCACCGCAACTGAAAAGGGAAGGAAGTGGAGTATCGAGTTTGATAGACATGGAAATGGAGAAGTTATTGGAGGACTCCGTGCCCTGCCGTGTGAGGGCCAAGCGTGGCTGTGCGACGCATCCTCGGAGCATTGCTGAGAGGGTTCGTAGGACTAGAATTAGTGACAGAATAAGGAAGCTTCAGGAGGTTGTCCCCAACATGGATAAGCAAACAAACACTGCGGATATGTTGGAAGAAGCAGTAGAGTATGTCAAATTCCTTCAAAAGCAGATTCAGGAACTCACCGAGCATCAGCGCAGGTGCACATGCACGGTTAAGGAATAA

Protein sequence

MQSTTGGATGSRSSGGGLARFRSAPAAWLEALLEDEEEDLLRPNQCLTQLLAGNSSDLDSPADQALFEPNPSAGFQRQNSSPAEFLGASGIGEGFYSSYAINSSAALEISPTSKRGREVDAQNFPPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCTCTVKE

Homology

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BLAST of CmaCh09G012210 vs. Swiss-Prot
Match: BH081_ARATH (Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 6.2e-67
Identity = 153/266 (57.52%), Postives = 184/266 (69.17%), Query Frame = 1


Query: 1   MQSTTGGATGSRSSGGG-----------LARFRSAPAAWLEALLEDEEEDLLRPNQCLTQ 60
           MQ T+ G++G    GGG           L+R RSAPA WLEALLE++EE+ L+PN  LT 
Sbjct: 1   MQPTSVGSSGGGDDGGGRGGGGGLSRSGLSRIRSAPATWLEALLEEDEEESLKPNLGLTD 60

Query: 61  LLAGNSSDLDS---------PADQALFEPNPSAGFQRQNSSPAEFLGASGIGEGFYSSYA 120
           LL GNS+DL +         P +Q L++     GF RQNS+PA+FL  S   +GF  S+ 
Sbjct: 61  LLTGNSNDLPTSRGSFEFPIPVEQGLYQ---QGGFHRQNSTPADFLSGS---DGFIQSFG 120

Query: 121 INS-----SAALEISPTSKRGREVDAQNFPPKFSPQLKREGS------GVSSLIDMEMEK 180
           I +     S  +++SP SKR RE++A    P+F+ Q+K E S      GVSS+ DM ME 
Sbjct: 121 IQANYDYLSGNIDVSPGSKRSREMEALFSSPEFTSQMKGEQSSGQVPTGVSSMSDMNMEN 180

Query: 181 LLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAV 236
           L+EDSV  RVRAKRGCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADMLEEAV
Sbjct: 181 LMEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAV 240

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BLAST of CmaCh09G012210 vs. Swiss-Prot
Match: BH080_ARATH (Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 8.1e-67
Identity = 150/263 (57.03%), Postives = 186/263 (70.72%), Query Frame = 1


Query: 1   MQST--TGGATGSRSSGGG------LARFRSAPAAWLEALLEDEEEDLLRPNQCLTQLLA 60
           MQST  +GG++G    GGG      L+R RSAPA W+E LLE++EE+ L+PN CLT+LL 
Sbjct: 1   MQSTHISGGSSGGGGGGGGEVSRSGLSRIRSAPATWIETLLEEDEEEGLKPNLCLTELLT 60

Query: 61  GNSS------------DLDSPADQALFEPNPSAGFQRQNSSPAEFLGASGIG-EGFYSSY 120
           GN++            +  S  +Q L+  +   GF RQNSSPA+FL  SG G +G++S++
Sbjct: 61  GNNNSGGVITSRDDSFEFLSSVEQGLYNHHQGGGFHRQNSSPADFLSGSGSGTDGYFSNF 120

Query: 121 AINS-----SAALEISPTSKRGREVDAQNFPPKFSPQLKRE--GSGVSSLIDMEMEKLLE 180
            I +     S  ++ISPT KR R+++ Q     FS QLK E    G+S ++DM M+K+ E
Sbjct: 121 GIPANYDYLSTNVDISPT-KRSRDMETQ-----FSSQLKEEQMSGGISGMMDMNMDKIFE 180

Query: 181 DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYV 236
           DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIR+LQE+VPNMDKQTNTADMLEEAVEYV
Sbjct: 181 DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYV 240

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BLAST of CmaCh09G012210 vs. Swiss-Prot
Match: BH130_ARATH (Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 8.7e-29
Identity = 63/104 (60.58%), Postives = 83/104 (79.81%), Query Frame = 1


Query: 132 LKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEV 191
           L +  S  S ++ ++    L+DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQE+
Sbjct: 252 LPKSSSTASDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 311

Query: 192 VPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCTCTVKE 236
           VPNMDKQTNT+DML+ AV+Y+K LQ+Q + L +++  C C  KE
Sbjct: 312 VPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNKE 355

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BLAST of CmaCh09G012210 vs. Swiss-Prot
Match: BH122_ARATH (Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.3e-28
Identity = 65/103 (63.11%), Postives = 83/103 (80.58%), Query Frame = 1


Query: 130 PQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ 189
           P L    S   SL D+  E+LL DS+PC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQ
Sbjct: 277 PPLAHHMSLPKSLSDI--EQLLSDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQ 336

Query: 190 EVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCTCT 233
           ++VPNMD QTNTADML+ AV+Y+K LQ+Q++ L E + RC C+
Sbjct: 337 DLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRCS 377

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BLAST of CmaCh09G012210 vs. Swiss-Prot
Match: BH128_ARATH (Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.4e-25
Identity = 91/236 (38.56%), Postives = 121/236 (51.27%), Query Frame = 1


Query: 10  GSRSSGG-GLARFRSAPAAWLEALLEDEEE-DLLRPNQCLTQLLAGNSSDLDSPADQALF 69
           G  SSG   LAR RS+PA +   L  D+    L +P    +     N     S     L 
Sbjct: 130 GGNSSGSYSLARQRSSPADFFTYLASDKNNFSLNQPTSDYSPQGGSNGGRGHSRLKSQLS 189

Query: 70  EPNPS--AGFQRQNSSPAE-----FLGASGIGEGFYSSYAINS-SAALEISPTSKRGREV 129
             N    A     N +P          A+  G     S+   S S    ++  SKR +++
Sbjct: 190 FTNHDSLARINEVNETPVHDGSGHSFSAASFGAATTDSWDDGSGSIGFTVTRPSKRSKDM 249

Query: 130 DAQNFPPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRT 189
           D+  F     P      S  S        +L EDSVPC++RAKRGCATHPRSIAER RRT
Sbjct: 250 DSGLFSQYSLP------SDTSMNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRT 309

Query: 190 RISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCTCTVKE 236
           RIS +++KLQ++VPNMDKQT+ +DML+ AV+++K LQ Q+Q L + Q  CTC   E
Sbjct: 310 RISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGCSE 359

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BLAST of CmaCh09G012210 vs. TrEMBL
Match: A0A0A0KY01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652220 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.5e-99
Identity = 202/244 (82.79%), Postives = 211/244 (86.48%), Query Frame = 1


Query: 1   MQSTTGGAT------GSRSSGGG--LARFRSAPAAWLEALLEDEEEDLLRPNQCLTQLLA 60
           MQSTTG A+       SR+S GG  LARFRSAPAAWLEALLED+EED L+PN CLTQLLA
Sbjct: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60

Query: 61  GNSSDLDS-PADQALFEPNPSAGFQRQNSSPAEFLGASGIGEGFYSSYAINSSAALEISP 120
            NSSDLDS PAD  LF+PNPS  F RQNSSP EFL  SGI EGFY+SY +NSS  L+ISP
Sbjct: 61  ANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120

Query: 121 TSKRGREVDAQNFPPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180
           TSK   +VDAQNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS
Sbjct: 121 TSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180

Query: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCTC 236
           IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRC C
Sbjct: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240

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BLAST of CmaCh09G012210 vs. TrEMBL
Match: A0A061FKW9_THECC (Basic helix-loop-helix DNA-binding superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_036484 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 7.3e-75
Identity = 167/254 (65.75%), Postives = 191/254 (75.20%), Query Frame = 1


Query: 3   STTGGATGSRSSGGGLARFRSAPAAWLEALLEDEEEDLLRPNQCLTQLLAGNSSD----- 62
           S+ GG  G   S GGLARFRSAPA WLEALLE+EEED L+PNQCLTQLL  NS+      
Sbjct: 11  SSGGGGGGGELSRGGLARFRSAPATWLEALLEEEEEDPLKPNQCLTQLLTANSTTPATRD 70

Query: 63  ---LDSPADQA-LFEPNPSAGFQRQNSSPAEFLG--ASGIGEGFYSSYAINS-----SAA 122
                S AD A LFEP    GFQRQNSSPA+FLG  +    + ++S++ I +     S  
Sbjct: 71  SGPFSSSADPAGLFEPT---GFQRQNSSPADFLGNNSGAASDAYFSNFGIPANYDYLSPN 130

Query: 123 LEISPTSKRGREVDAQNFPPKFSPQLKRE-----GSGVSSLIDMEMEKLLEDSVPCRVRA 182
           ++ SP+SKR RE+D Q  P KF  QLK E      SGVS+LID++MEKLLEDSVPCRVRA
Sbjct: 131 IDASPSSKRARELDTQYPPTKFQSQLKGEQRGQISSGVSNLIDVDMEKLLEDSVPCRVRA 190

Query: 183 KRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQE 236
           KRGCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADML+EAVEYVK+LQKQI+E
Sbjct: 191 KRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVEYVKYLQKQIEE 250

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BLAST of CmaCh09G012210 vs. TrEMBL
Match: A0A0B0NRZ3_GOSAR (Transcription factor bHLH80-like protein OS=Gossypium arboreum GN=F383_04086 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.1e-73
Identity = 162/252 (64.29%), Postives = 194/252 (76.98%), Query Frame = 1


Query: 3   STTGGATGSRSSGGGLARFRSAPAAWLEALLEDEEEDLLRPNQCLTQLLAGNSSDLDSPA 62
           S+ GGA GSR+   GLARFRSAPA WLEALLE+EEED L+P+QCLTQLL GNSS   +  
Sbjct: 11  SSGGGAEGSRA---GLARFRSAPATWLEALLEEEEEDPLKPSQCLTQLLTGNSSSTPTIR 70

Query: 63  DQALF--EPNPS-----AGFQRQNSSPAEFLG--ASGIGEGFYSSYAINS-----SAALE 122
           +  LF    +PS     +GFQRQNSSPA+FLG   +   + ++S++ + +     S  ++
Sbjct: 71  NSLLFPNSADPSGLFEPSGFQRQNSSPADFLGNNPAAASDAYFSNFGVAANYDYLSPTMD 130

Query: 123 ISPTSKRGREVDAQNFPPKFSPQLKREGS-----GVSSLIDMEMEKLLEDSVPCRVRAKR 182
           +SP+SKR  E+D Q  P KF  QLK E S     G+S+LID++MEKLLEDSVPCRVRAKR
Sbjct: 131 VSPSSKRASELDTQFPPTKFHSQLKGEPSDQISGGISNLIDVDMEKLLEDSVPCRVRAKR 190

Query: 183 GCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELT 236
           GCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADMLEEAVEYVK+LQ+QIQELT
Sbjct: 191 GCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKYLQRQIQELT 250

[Close]

BLAST of CmaCh09G012210 vs. TrEMBL
Match: A0A0D2S5I7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G138300 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.6e-72
Identity = 160/253 (63.24%), Postives = 193/253 (76.28%), Query Frame = 1


Query: 3   STTGGATGSRSSGGGLARFRSAPAAWLEALLEDEEEDLLRPNQCLTQLLAGNSSDLDSPA 62
           S+ GGA GSR+   GLARFRSAPA WLEALLE+EEED L+P+QCLTQLL GNS+   +  
Sbjct: 11  SSGGGAEGSRA---GLARFRSAPATWLEALLEEEEEDPLKPSQCLTQLLTGNSTSTPTIR 70

Query: 63  DQALFEPNPS--------AGFQRQNSSPAEFLG--ASGIGEGFYSSYAINS-----SAAL 122
           +  LF PN +        +GFQRQNSSPA+F G   +   + ++S++ + +     S  +
Sbjct: 71  NSLLF-PNSAYPSGLFEPSGFQRQNSSPADFPGNNPAASSDAYFSNFGVVANYDYLSPTM 130

Query: 123 EISPTSKRGREVDAQNFPPKFSPQLKREGS-----GVSSLIDMEMEKLLEDSVPCRVRAK 182
           ++SP+SKR  E+D Q  P KF  QLK E S     G+S+LID++MEKLLEDSVPCRVRAK
Sbjct: 131 DVSPSSKRASELDTQFPPTKFHSQLKGEPSDQISGGISNLIDVDMEKLLEDSVPCRVRAK 190

Query: 183 RGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQEL 236
           RGCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADMLEEAVEYVK+LQ+QIQEL
Sbjct: 191 RGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKYLQRQIQEL 250

[Close]

BLAST of CmaCh09G012210 vs. TrEMBL
Match: A0A087GD52_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G431300 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.4e-70
Identity = 157/242 (64.88%), Postives = 180/242 (74.38%), Query Frame = 1


Query: 1   MQSTTGGATGSRSSGGGLARFRSAPAAWLEALLEDEEEDLLRPNQCLTQLLAGNSSDL-- 60
           MQST  G       G GLAR RSAPA W+E LLED+EED L+PN CLT+LL GNS ++  
Sbjct: 1   MQSTHVGGNSGGGGGSGLARIRSAPANWIETLLEDDEEDALKPNLCLTELLTGNSGEITS 60

Query: 61  -DSPADQALFEPNPSAGFQRQNSSPAEFLGASGIG-EGFYSSYAINSSAA-LEISPTSKR 120
            DS    +  E N   GF RQNSSPA+FL  SG G +GF+S++ I +S   +++SP SKR
Sbjct: 61  RDSFEFPSPVEYNHQGGFHRQNSSPADFLSGSGAGSDGFFSNFGIPASYDYVDMSPVSKR 120

Query: 121 GREVDAQNFPPKFSPQLKRE--GSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIA 180
            RE+DA      FS Q+K E    GVS ++DM M+KLLEDSVPCRVRAKRGCATHPRSIA
Sbjct: 121 SREMDAH-----FSSQMKEEEMSGGVSGMMDMNMDKLLEDSVPCRVRAKRGCATHPRSIA 180

Query: 181 ERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCTCTV 236
           ERVRRTRISDRIR+LQE+VPNMDKQTNTADMLEEAVEYVK LQ QIQELTE QRRC C  
Sbjct: 181 ERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQELTEQQRRCVCKP 237

[Close]

BLAST of CmaCh09G012210 vs. TAIR10
Match: AT4G09180.1 (AT4G09180.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 255.4 bits (651), Expect = 3.5e-68
Identity = 153/266 (57.52%), Postives = 184/266 (69.17%), Query Frame = 1


Query: 1   MQSTTGGATGSRSSGGG-----------LARFRSAPAAWLEALLEDEEEDLLRPNQCLTQ 60
           MQ T+ G++G    GGG           L+R RSAPA WLEALLE++EE+ L+PN  LT 
Sbjct: 1   MQPTSVGSSGGGDDGGGRGGGGGLSRSGLSRIRSAPATWLEALLEEDEEESLKPNLGLTD 60

Query: 61  LLAGNSSDLDS---------PADQALFEPNPSAGFQRQNSSPAEFLGASGIGEGFYSSYA 120
           LL GNS+DL +         P +Q L++     GF RQNS+PA+FL  S   +GF  S+ 
Sbjct: 61  LLTGNSNDLPTSRGSFEFPIPVEQGLYQ---QGGFHRQNSTPADFLSGS---DGFIQSFG 120

Query: 121 INS-----SAALEISPTSKRGREVDAQNFPPKFSPQLKREGS------GVSSLIDMEMEK 180
           I +     S  +++SP SKR RE++A    P+F+ Q+K E S      GVSS+ DM ME 
Sbjct: 121 IQANYDYLSGNIDVSPGSKRSREMEALFSSPEFTSQMKGEQSSGQVPTGVSSMSDMNMEN 180

Query: 181 LLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAV 236
           L+EDSV  RVRAKRGCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADMLEEAV
Sbjct: 181 LMEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAV 240

[Close]

BLAST of CmaCh09G012210 vs. TAIR10
Match: AT1G35460.1 (AT1G35460.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 255.0 bits (650), Expect = 4.5e-68
Identity = 150/263 (57.03%), Postives = 186/263 (70.72%), Query Frame = 1


Query: 1   MQST--TGGATGSRSSGGG------LARFRSAPAAWLEALLEDEEEDLLRPNQCLTQLLA 60
           MQST  +GG++G    GGG      L+R RSAPA W+E LLE++EE+ L+PN CLT+LL 
Sbjct: 1   MQSTHISGGSSGGGGGGGGEVSRSGLSRIRSAPATWIETLLEEDEEEGLKPNLCLTELLT 60

Query: 61  GNSS------------DLDSPADQALFEPNPSAGFQRQNSSPAEFLGASGIG-EGFYSSY 120
           GN++            +  S  +Q L+  +   GF RQNSSPA+FL  SG G +G++S++
Sbjct: 61  GNNNSGGVITSRDDSFEFLSSVEQGLYNHHQGGGFHRQNSSPADFLSGSGSGTDGYFSNF 120

Query: 121 AINS-----SAALEISPTSKRGREVDAQNFPPKFSPQLKRE--GSGVSSLIDMEMEKLLE 180
            I +     S  ++ISPT KR R+++ Q     FS QLK E    G+S ++DM M+K+ E
Sbjct: 121 GIPANYDYLSTNVDISPT-KRSRDMETQ-----FSSQLKEEQMSGGISGMMDMNMDKIFE 180

Query: 181 DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYV 236
           DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIR+LQE+VPNMDKQTNTADMLEEAVEYV
Sbjct: 181 DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYV 240

[Close]

BLAST of CmaCh09G012210 vs. TAIR10
Match: AT2G42280.1 (AT2G42280.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 128.6 bits (322), Expect = 4.9e-30
Identity = 63/104 (60.58%), Postives = 83/104 (79.81%), Query Frame = 1


Query: 132 LKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEV 191
           L +  S  S ++ ++    L+DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQE+
Sbjct: 252 LPKSSSTASDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 311

Query: 192 VPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCTCTVKE 236
           VPNMDKQTNT+DML+ AV+Y+K LQ+Q + L +++  C C  KE
Sbjct: 312 VPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNKE 355

[Close]

BLAST of CmaCh09G012210 vs. TAIR10
Match: AT1G51140.1 (AT1G51140.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-29
Identity = 65/103 (63.11%), Postives = 83/103 (80.58%), Query Frame = 1


Query: 130 PQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ 189
           P L    S   SL D+  E+LL DS+PC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQ
Sbjct: 277 PPLAHHMSLPKSLSDI--EQLLSDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQ 336

Query: 190 EVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCTCT 233
           ++VPNMD QTNTADML+ AV+Y+K LQ+Q++ L E + RC C+
Sbjct: 337 DLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRCS 377

[Close]

BLAST of CmaCh09G012210 vs. TAIR10
Match: AT1G05805.1 (AT1G05805.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.9e-26
Identity = 91/236 (38.56%), Postives = 121/236 (51.27%), Query Frame = 1


Query: 10  GSRSSGG-GLARFRSAPAAWLEALLEDEEE-DLLRPNQCLTQLLAGNSSDLDSPADQALF 69
           G  SSG   LAR RS+PA +   L  D+    L +P    +     N     S     L 
Sbjct: 130 GGNSSGSYSLARQRSSPADFFTYLASDKNNFSLNQPTSDYSPQGGSNGGRGHSRLKSQLS 189

Query: 70  EPNPS--AGFQRQNSSPAE-----FLGASGIGEGFYSSYAINS-SAALEISPTSKRGREV 129
             N    A     N +P          A+  G     S+   S S    ++  SKR +++
Sbjct: 190 FTNHDSLARINEVNETPVHDGSGHSFSAASFGAATTDSWDDGSGSIGFTVTRPSKRSKDM 249

Query: 130 DAQNFPPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRT 189
           D+  F     P      S  S        +L EDSVPC++RAKRGCATHPRSIAER RRT
Sbjct: 250 DSGLFSQYSLP------SDTSMNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRT 309

Query: 190 RISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCTCTVKE 236
           RIS +++KLQ++VPNMDKQT+ +DML+ AV+++K LQ Q+Q L + Q  CTC   E
Sbjct: 310 RISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGCSE 359

[Close]

BLAST of CmaCh09G012210 vs. NCBI nr
Match: gi|449447621|ref|XP_004141566.1| (PREDICTED: transcription factor bHLH81 isoform X1 [Cucumis sativus])

HSP 1 Score: 370.5 bits (950), Expect = 2.1e-99
Identity = 202/244 (82.79%), Postives = 211/244 (86.48%), Query Frame = 1


Query: 1   MQSTTGGAT------GSRSSGGG--LARFRSAPAAWLEALLEDEEEDLLRPNQCLTQLLA 60
           MQSTTG A+       SR+S GG  LARFRSAPAAWLEALLED+EED L+PN CLTQLLA
Sbjct: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60

Query: 61  GNSSDLDS-PADQALFEPNPSAGFQRQNSSPAEFLGASGIGEGFYSSYAINSSAALEISP 120
            NSSDLDS PAD  LF+PNPS  F RQNSSP EFL  SGI EGFY+SY +NSS  L+ISP
Sbjct: 61  ANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120

Query: 121 TSKRGREVDAQNFPPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180
           TSK   +VDAQNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS
Sbjct: 121 TSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180

Query: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCTC 236
           IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRC C
Sbjct: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240

[Close]

BLAST of CmaCh09G012210 vs. NCBI nr
Match: gi|659119475|ref|XP_008459678.1| (PREDICTED: transcription factor bHLH80 isoform X1 [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 1.0e-98
Identity = 201/242 (83.06%), Postives = 209/242 (86.36%), Query Frame = 1


Query: 1   MQSTTGGAT----GSRSSGGG--LARFRSAPAAWLEALLEDEEEDLLRPNQCLTQLLAGN 60
           MQSTTG A      SR+SGGG  LARFRSAPAAWLEALLED+EED L+PN CLTQLLA N
Sbjct: 1   MQSTTGAAATATASSRTSGGGPGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLAAN 60

Query: 61  SSDLDS-PADQALFEPNPSAGFQRQNSSPAEFLGASGIGEGFYSSYAINSSAALEISPTS 120
           SSDL S P D  LF+PNPS  F RQNSSP EFL  SGI EGFY+SY +NSS  L+ISPTS
Sbjct: 61  SSDLVSAPGDHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISPTS 120

Query: 121 KRGREVDAQNFPPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIA 180
           K   +VDAQNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIA
Sbjct: 121 KPATDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIA 180

Query: 181 ERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCTCTV 236
           ERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRC C V
Sbjct: 181 ERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMV 240

[Close]

BLAST of CmaCh09G012210 vs. NCBI nr
Match: gi|778708105|ref|XP_011656122.1| (PREDICTED: transcription factor bHLH81 isoform X2 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 9.5e-84
Identity = 180/244 (73.77%), Postives = 189/244 (77.46%), Query Frame = 1


Query: 1   MQSTTGGAT------GSRSSGGG--LARFRSAPAAWLEALLEDEEEDLLRPNQCLTQLLA 60
           MQSTTG A+       SR+S GG  LARFRSAPAAWLEALLED+EED L+PN CLTQLLA
Sbjct: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60

Query: 61  GNSSDLDS-PADQALFEPNPSAGFQRQNSSPAEFLGASGIGEGFYSSYAINSSAALEISP 120
            NSSDLDS PAD  LF+PNPS  F RQNSSP EFL  SGI EGFY+SY +NSS  L+ISP
Sbjct: 61  ANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120

Query: 121 TSKRGREVDAQNFPPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180
           TSK   +VDAQNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS
Sbjct: 121 TSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180

Query: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCTC 236
           IAER                      QTNTADMLEEAVEYVKFLQKQIQELTEHQRRC C
Sbjct: 181 IAER----------------------QTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 222

[Close]

BLAST of CmaCh09G012210 vs. NCBI nr
Match: gi|659119477|ref|XP_008459679.1| (PREDICTED: transcription factor bHLH80 isoform X2 [Cucumis melo])

HSP 1 Score: 316.2 bits (809), Expect = 4.7e-83
Identity = 179/242 (73.97%), Postives = 187/242 (77.27%), Query Frame = 1


Query: 1   MQSTTGGAT----GSRSSGGG--LARFRSAPAAWLEALLEDEEEDLLRPNQCLTQLLAGN 60
           MQSTTG A      SR+SGGG  LARFRSAPAAWLEALLED+EED L+PN CLTQLLA N
Sbjct: 1   MQSTTGAAATATASSRTSGGGPGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLAAN 60

Query: 61  SSDLDS-PADQALFEPNPSAGFQRQNSSPAEFLGASGIGEGFYSSYAINSSAALEISPTS 120
           SSDL S P D  LF+PNPS  F RQNSSP EFL  SGI EGFY+SY +NSS  L+ISPTS
Sbjct: 61  SSDLVSAPGDHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISPTS 120

Query: 121 KRGREVDAQNFPPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIA 180
           K   +VDAQNF PKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIA
Sbjct: 121 KPATDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIA 180

Query: 181 ERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCTCTV 236
           ER                      QTNTADMLEEAVEYVKFLQKQIQELTEHQRRC C V
Sbjct: 181 ER----------------------QTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMV 220

[Close]

BLAST of CmaCh09G012210 vs. NCBI nr
Match: gi|590603789|ref|XP_007020097.1| (Basic helix-loop-helix DNA-binding superfamily protein isoform 2 [Theobroma cacao])

HSP 1 Score: 288.5 bits (737), Expect = 1.1e-74
Identity = 167/254 (65.75%), Postives = 191/254 (75.20%), Query Frame = 1


Query: 3   STTGGATGSRSSGGGLARFRSAPAAWLEALLEDEEEDLLRPNQCLTQLLAGNSSD----- 62
           S+ GG  G   S GGLARFRSAPA WLEALLE+EEED L+PNQCLTQLL  NS+      
Sbjct: 11  SSGGGGGGGELSRGGLARFRSAPATWLEALLEEEEEDPLKPNQCLTQLLTANSTTPATRD 70

Query: 63  ---LDSPADQA-LFEPNPSAGFQRQNSSPAEFLG--ASGIGEGFYSSYAINS-----SAA 122
                S AD A LFEP    GFQRQNSSPA+FLG  +    + ++S++ I +     S  
Sbjct: 71  SGPFSSSADPAGLFEPT---GFQRQNSSPADFLGNNSGAASDAYFSNFGIPANYDYLSPN 130

Query: 123 LEISPTSKRGREVDAQNFPPKFSPQLKRE-----GSGVSSLIDMEMEKLLEDSVPCRVRA 182
           ++ SP+SKR RE+D Q  P KF  QLK E      SGVS+LID++MEKLLEDSVPCRVRA
Sbjct: 131 IDASPSSKRARELDTQYPPTKFQSQLKGEQRGQISSGVSNLIDVDMEKLLEDSVPCRVRA 190

Query: 183 KRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQE 236
           KRGCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADML+EAVEYVK+LQKQI+E
Sbjct: 191 KRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVEYVKYLQKQIEE 250

The following BLAST results are available for this feature:

BLAST of CmaCh09G012210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH081_ARATH	6.2e-67	57.52	Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2 SV=1	[more]
BH080_ARATH	8.1e-67	57.03	Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=2 SV=1	[more]
BH130_ARATH	8.7e-29	60.58	Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130 PE=1 SV=1	[more]
BH122_ARATH	3.3e-28	63.11	Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122 PE=1 SV=1	[more]
BH128_ARATH	3.4e-25	38.56	Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128 PE=1 SV=1	[more]

BLAST of CmaCh09G012210 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY01_CUCSA	1.5e-99	82.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652220 PE=4 SV=1	[more]
A0A061FKW9_THECC	7.3e-75	65.75	Basic helix-loop-helix DNA-binding superfamily protein isoform 2 OS=Theobroma ca...	[more]
A0A0B0NRZ3_GOSAR	1.1e-73	64.29	Transcription factor bHLH80-like protein OS=Gossypium arboreum GN=F383_04086 PE=...	[more]
A0A0D2S5I7_GOSRA	2.6e-72	63.24	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G138300 PE=4 SV=1	[more]
A0A087GD52_ARAAL	1.4e-70	64.88	Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G431300 PE=4 SV=1	[more]

BLAST of CmaCh09G012210 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G09180.1	3.5e-68	57.52	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G35460.1	4.5e-68	57.03	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G42280.1	4.9e-30	60.58	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G51140.1	1.9e-29	63.11	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G05805.1	1.9e-26	38.56	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of CmaCh09G012210 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447621\|ref\|XP_004141566.1\|	2.1e-99	82.79	PREDICTED: transcription factor bHLH81 isoform X1 [Cucumis sativus]	[more]
gi\|659119475\|ref\|XP_008459678.1\|	1.0e-98	83.06	PREDICTED: transcription factor bHLH80 isoform X1 [Cucumis melo]	[more]
gi\|778708105\|ref\|XP_011656122.1\|	9.5e-84	73.77	PREDICTED: transcription factor bHLH81 isoform X2 [Cucumis sativus]	[more]
gi\|659119477\|ref\|XP_008459679.1\|	4.7e-83	73.97	PREDICTED: transcription factor bHLH80 isoform X2 [Cucumis melo]	[more]
gi\|590603789\|ref\|XP_007020097.1\|	1.1e-74	65.75	Basic helix-loop-helix DNA-binding superfamily protein isoform 2 [Theobroma caca...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G012210.1	CmaCh09G012210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 170..228 score: 2.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 171..216 score: 7.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 171..221 score: 4.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 165..215 score: 14
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 168..228 score: 1.83
None	No IPR available	unknown	Coil	Coil	coord: 205..225 scor
None	No IPR available	PANTHER	PTHR16223	FAMILY NOT NAMED	coord: 10..235 score: 1.9
None	No IPR available	PANTHER	PTHR16223:SF36	SUBFAMILY NOT NAMED	coord: 10..235 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G012210	Cucsa.061590	Cucumber (Gy14) v1	cgycmaB0087
CmaCh09G012210	Cla003872	Watermelon (97103) v1	cmawmB016
CmaCh09G012210	Csa5G652220	Cucumber (Chinese Long) v2	cmacuB030
CmaCh09G012210	MELO3C022222	Melon (DHL92) v3.5.1	cmameB010
CmaCh09G012210	ClCG08G000260	Watermelon (Charleston Gray)	cmawcgB030
CmaCh09G012210	CSPI05G31450	Wild cucumber (PI 183967)	cmacpiB030
CmaCh09G012210	CmoCh09G013280	Cucurbita moschata (Rifu)	cmacmoB029
CmaCh09G012210	Lsi08G000180	Bottle gourd (USVL1VR-Ls)	cmalsiB033
CmaCh09G012210	Cp4.1LG06g10120	Cucurbita pepo (Zucchini)	cmacpeB062
CmaCh09G012210	MELO3C022222.2	Melon (DHL92) v3.6.1	cmamedB011
CmaCh09G012210	CsaV3_5G040480	Cucumber (Chinese Long) v3	cmacucB0037
CmaCh09G012210	Cla97C08G144700	Watermelon (97103) v2	cmawmbB036
CmaCh09G012210	Bhi06G000239	Wax gourd	cmawgoB0010
CmaCh09G012210	CsGy5G030750	Cucumber (Gy14) v2	cgybcmaB579
CmaCh09G012210	Carg27182	Silver-seed gourd	carcmaB1193

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G012210	Cucumber (Gy14) v2	cgybcmaB580
CmaCh09G012210	Melon (DHL92) v3.6.1	cmamedB012
CmaCh09G012210	Wax gourd	cmawgoB0011
CmaCh09G012210	Wax gourd	cmawgoB0012
CmaCh09G012210	Cucumber (Gy14) v1	cgycmaB0658
CmaCh09G012210	Wild cucumber (PI 183967)	cmacpiB031
CmaCh09G012210	Melon (DHL92) v3.5.1	cmameB011