Cucsa.061590 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.061590
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Location	scaffold00651 : 81779 .. 86062 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCTCAACTCAATCCCCTCCTTCTCTGCTGCTGCTGCTGTCGTCGTCGTCGTCGTCGACTCGTCGTCGTCTTTGTGACTGACTGACTGACTGTACCACCACCCTCGGCAGATGCAATCCACAACTGGTGCTGCTTCTACTGCTACTGCTACTGCTAGTAGTCGTACCTCCGCTGGCGGCGCCGGCCTTGCTCGCTTCCGCTCTGCTCCTGCTGCCTGGTTGGAAGCTCTTTTGGAGGACGACGAGGAGGACCCTCTCAAGCCCAATCCCTGCTTGACTCAGCTTCTCGCCGCCAACTCCTCCGACCTCGATTCAGCTCCCGCGGATCACCCCTTGTTCGACCCCAATCCCTCTCCCGCCTTCCACAGGCAGAATAGCTCCCCACCTGAGTTTCTTGCTCCCTCTGGAATTGCTGAAGGATTTTACACCTCCTATCCTCTCAATTCCTCCCCTACTCTCGACATCTCTCCCACCTCCAAGCCATCTACAGATGTCGACGCCCAAAACTTCTTCCCCAAATTTTCACCTCAACTGGTAATCGTTTTATTTGCTGCCTTCTGTTTCACGATGCCCACTCATGATTTCTTTTCCCTTCAAATTATTTATCTGTAAATTTTGGGCAGAAAAGGGAAGGAAGTGGAGTTTCCAGTTTGATAGACATGGAAATGGAGAAGTTATTGGAGGACTCTGTGCCCTGCCGGGTAAGAGCCAAGCGTGGCTGTGCGACGCATCCTCGGAGCATTGCTGAGAGGGTTAGTTCTTTTtAAAAGCTTATATCTATCTTCCTTCACTCTTTTCGTTGACCACTTTTCAATGACCAATCTCACTCtGCATAACGTTTGCTGACTTTTGAGATGGtAttTtttTtTTTTTTTTtttttGCTCTATTCACCATTCATCATCTGTGCTCTCTTGTTGCGTCTGTTTCATTCTTACTTTCTACCCCTTTCTGTTATTTGTTGCCAAGCTATGCTAAATCATCACGTTTGTCTAATCACTATAACAACACACAGCAAAAAAaTATTATTTACTTTTtTTTTtCCTGATGGTAGGTTCGTAGGACTAGAATTAGTGACAGAATAAGGAAGCTTCAGGAAGTTGTCCCCAACATGGATAAGGTAAACTATGTCATGGTTGATCGTTATGAATGAATTTGGATCTATCTTTTATGATATGTATTGAAAATTCTTTTCTGCCATGTGGTTCTGCTTGCAGTTCCTTCCTTGAATTCCATTTTTATTTTTGGCTTCTAGTTTAGGCTGGAACTTTACTTTATGATTAATGAAGTCTAACATGTTACAATTAGTTGAGTAATGGGGACAAGATTGTGTGGTTGGACGTGGACCATCCTTACTGATTTCAGATAATATTTTTTCCCTAACCATTTCTCATTGGTTGATGAAGTAGATTACCCAAAAAACAAAAAaGACTATCAGTGAGTAATTACGAAAACCACCTACATACCTACAGTGTGCTATGAGGGACAGTAGACTATATAATTACAAAATGCATTTTACATCTTCCGAGCAACAAAGCCATCTTACAAATTTTTtGGACTGATGAAGTTTACCAAACTTCACTGGAGTTGGTCTTAAATGGATGTGGCACGTGTGCTAATATATTGAATTTTTTTATCTTCTCATGTATCAGATGTTGGGAAATGCCGGTTTATTAATATGTAGGAAATAAACATTCATCTATTTTTTGGATAGTGAACAATTTTACTAAATAATGAAATAAACAAAATCGAGATACTATCCAAAGACGGAGAGTTTACAAAACCCTTCCCAATTGAAAAGGGAAGAATTTAAGCTGTCATTGTTGAAAGGAAGTATATTCTTACACCAGTAAAGAGCTATAGAGACAGTTGTTTCAAAGTTTTCTTGGGGATAAGTTTCTGTCTCTTGGAAAATCCTAAGATTCCTTTTGTTCCATATCTTCCATAAAACTGCTCTGATGATAAGTAGCCAAAGAATACTTTGTAGATTTGAATATGTATTCTATTTATAGCAATTCAAGTCAATTTGTAAGTTCTAAATGGTGGGACGACATTCCAACCAAAGGCACTAAAGACTTCAGTCCATATTTTTGCAGAGAAGGGAAGGgAAGGGAAGGGAAGGACAGGGGCAGTGAATGAAGATGTGCCTTTTAAGATTCTTCAGCTTCTTAATACTAACCAAACGATCTAGACCTCAGCTACATGCATTATGCCAATCGGCCCACCAATGGGGGAGCAACTTAAGATTGAACGTGTGAGGGTGAGGTTAGGATTGTATACACATATGCATTTGTTTGTTGGAATCCTGGAAGAACTTCAATGCATTTTGGTGACTTATCTTTGATGGTTGATTTTGTGATGAGAACTTCTGAATATTTTTATGGAAAGACAAACTTTTGGGTCTCCTCCATGAGGTTTCAAAGGAAAaCCTTAGTCCTTAAAGTTTCGAAATAAATTCTAAACAGTGCCTAGGATTTGACCGTTAGTTGACTAACGGAAAAATGCATTGATTAATCTAATGGTGCAGAGCTTGGGAGCGTCCACACTTCAACATGTTTTCTTTTCCAGTTGAGCTAAAAATTAGGTAAGCAAGGTGGAATGGCAGAGACGAAATTAGAAGCAGACTGAAGCTTCAATTCAACTAAGAGAAAACTGGAATCTGCCACCAACTTTAGAGCGAAAACAAAGGGTTGAGTTGACTGAAAGAGAGTTAGGAAAGAAATCTCAAAGTCTATTCCTGAGAGAAATCCATGTGCGCTATTCGAAAGGTGTCTAAGTAAATGCACATAATCTTTTTATACCCACCCTGATTCTATCTCTCTACAAACAAATTACCCAAAATAATAATTGATAATAATAATTCTTGTGAACATACATGGGTTTACTTTTAGCATGTAAACAGAGAAATGAGTTGGAACTGATAACTTGGTTTGGGTTTAGTGCTATTAGGATTTTTGGATGGAGGGACTTTCTTTCTAGATCTACTGGCAAACGAGCGTGAAGGTCATCTGCTCAGAACAAGCAAAAATGTGGTGGATAAGAGACAATGATGAAGGCATATGTCTTCAGATGATGATGGTGATAACTAGGAGGCATAGTAGGTAATTGTGGTCAGAGAAGAGCGGCGCTAATGACTAGAAGGGGAGAGAGTGGAGAAAGAAAaGGGAGAGAGGGAAGTTGGCAAGTTGGAAAAGCAAGTCACTAACTTAACCGAACACATTTTAATTCCGTTTGCGAAAGATCATTTTAAACCGAGGCTCAAACTTCAGGACCGATGATGCAAAATTACCATTTAAAAATTATTATGGGTAGGAAGGATGACATATCTTTCTTATTTCTGCAATGGTTGTTTATTTTAGGCTTGAACCCACGTGGTTTTCCTACTAGACATATTATCCTCTTATATATTCAAAAACTCTCTTTACTGTTTCTAACGCTTGTGAGACTATGTAAGCATTGTTTTCATTTCATATGGACAAAAGATTCATTTCCATTAACTTTAAACTTGAAACTAAGATCTGATTTATGGAAATTGTGAAACTATATGATGTCATCTATATTTGTTAGCTGAAGCATAAATAAATTTATCGATTTGTCATTTTCAATCTTCTTGCAGCAAACAAACACTGCAGATATGTTAGAAGAAGCAGTAGAGTATGTCAAATTCCTTCAAAAGCAAATCCAGGTATTCAACTGAATTAGCTAGACGCTGTCTTTAGATTCATCTATGACTACAAGTTTATGTGAAAACTGTTGGAGCCTCAAAAATCGTTTCTTCAATTATTACCTCAAATGATATCAGTTTGGAAACCTAATCTGTAACGGAGAAATATCACTTTGCTTCAAGTTACTACTGAAGTTTATGAAATTTATATGAACTGAATTGTCCCGAAACACCCAACAGGAACTTACGGAGCATCAGCGCAGGTGTAAATGCATGGTGAAAGAATAACAGGTTGAAGGAAGAATACTACTCCAGCCTGCAGAAATCGCCCTTCCACGATTAGTGTAAATTAGTAGGATTTCTGGGGACTTGAAAGGTCGTAAAAAGTAAATGAAGGTGTTTTAGCTATAATATTGTTATCTCTTTGGTTCTAAAGAAAATATCAACCTTGTAATGCATGCATTCAATATATATTGCATTCGTACGCAATAAGCAGGTGTAACAAAATGTTGGGGGACTCTTTTTTTTTtGGGAAAAAGAAATTGTTGAATAGTCCATTAGAACATTAGGTCTCTAATTTAAGGTACTCGTTCTGTGTAATTGTATTTTCAACATCCATCCA

mRNA sequence

AATCTCAACTCAATCCCCTCCTTCTCTGCTGCTGCTGCTgtcgtcgtcgtcgtcgtcgactcgtcgtcgtcTTTGTGACTGACTGACTGACTGTACCACCACCCTCGGCAGATGCAATCCACAActggtgctgcttctactgctactgctactgctagtagtcgtacctccgctggcggcgccggccttgctcgcttccgctctgctcctgctgcCTGGTTGGAAGCTCTTTTGGAGGACGACGAGGAGGACCCTCTCAAGCCCAATCCCTGCTTGACTCAGCTTCTCGCCGCCAACTCCTCCGACCTCGATTCAGCTCCCGCGGATCACCCCTTGTTCGACCCCAATCCCTCTCCCGCCTTCCACAGGCAGAATAGCTCCCCACCTGAGTTTCTTGCTCCCTCTGGAATTGCTGAAGGATTTTACACCTCCTATCCTCTCAATTCCTCCCCTACTCTCGACATCTCTCCCACCTCCAAGCCATCTACAGATGTCGACGCCCAAAACTTCTTCCCCAAATTTTCACCTCAACTGAAAAGGGAAGGAAGTGGAGTTTCCAGTTTGATAGACATGGAAATGGAGAAGTTATTGGAGGACTCTGTGCCCTGCCGGGTAAGAGCCAAGCGTGGCTGTGCGACGCATCCTCGGAGCATTGCTGAGAGGGTTCGTAGGACTAGAATTAGTGACAGAATAAGGAAGCTTCAGGAAGTTGTCCCCAACATGGATAAGCAAACAAACACTGCAGATATGTTAGAAGAAGCAGTAGAGTATGTCAAATTCCTTCAAAAGCAAATCCAGGAACTTACGGAGCATCAGCGCAGGTGTAAATGCATGGTGAAAGAATAACAGGTTGAAGGAAGAATACTACTCCAGCCTGCAGAAATCGCCCTTCCACGATTAGTGTAAATTAGTAGGATTTCTGGGGACTTGAAAGGTCGTAAAAAGTAAATGAAGGTGTTTTAGCTATAATATTGTTATCTCTTTGGTTCTAAAGAAAATATCAACCTTGTAATGCATGCATTCAATATATATTGCATTCGTACGCAATAAGCAGGTGTAACAAAATGTTGGGGGACTCTTTTTTTTTTGGGAAAAAGAAATTGTTGAATAGTCCATTAGAACATTAGGTCTCTAATTTAAGGTACTCGTTCTGTGTAATTGTATTTTCAACATCCATCCA

Coding sequence (CDS)

ATGCAATCCACAACTGGTGCTGCTTCTACTGCTACTGCTACTGCTAGTAGTCGTACCTCCGCTGGCGGCGCCGGCCTTGCTCGCTTCCGCTCTGCTCCTGCTGCCTGGTTGGAAGCTCTTTTGGAGGACGACGAGGAGGACCCTCTCAAGCCCAATCCCTGCTTGACTCAGCTTCTCGCCGCCAACTCCTCCGACCTCGATTCAGCTCCCGCGGATCACCCCTTGTTCGACCCCAATCCCTCTCCCGCCTTCCACAGGCAGAATAGCTCCCCACCTGAGTTTCTTGCTCCCTCTGGAATTGCTGAAGGATTTTACACCTCCTATCCTCTCAATTCCTCCCCTACTCTCGACATCTCTCCCACCTCCAAGCCATCTACAGATGTCGACGCCCAAAACTTCTTCCCCAAATTTTCACCTCAACTGAAAAGGGAAGGAAGTGGAGTTTCCAGTTTGATAGACATGGAAATGGAGAAGTTATTGGAGGACTCTGTGCCCTGCCGGGTAAGAGCCAAGCGTGGCTGTGCGACGCATCCTCGGAGCATTGCTGAGAGGGTTCGTAGGACTAGAATTAGTGACAGAATAAGGAAGCTTCAGGAAGTTGTCCCCAACATGGATAAGCAAACAAACACTGCAGATATGTTAGAAGAAGCAGTAGAGTATGTCAAATTCCTTCAAAAGCAAATCCAGGAACTTACGGAGCATCAGCGCAGGTGTAAATGCATGGTGAAAGAATAA

Protein sequence

MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLAANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISPTSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE*

Homology

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BLAST of Cucsa.061590 vs. Swiss-Prot
Match: BH081_ARATH (Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.2e-67
Identity = 149/266 (56.02%), Postives = 181/266 (68.05%), Query Frame = 1


Query: 1   MQSTTGAASTATATASSRTSAGG---AGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQ 60
           MQ T+  +S        R   GG   +GL+R RSAPA WLEALLE+DEE+ LKPN  LT 
Sbjct: 1   MQPTSVGSSGGGDDGGGRGGGGGLSRSGLSRIRSAPATWLEALLEEDEEESLKPNLGLTD 60

Query: 61  LLAANSSDLDSA--------PADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYP 120
           LL  NS+DL ++        P +  L+       FHRQNS+P +FL+ S   +GF  S+ 
Sbjct: 61  LLTGNSNDLPTSRGSFEFPIPVEQGLYQQG---GFHRQNSTPADFLSGS---DGFIQSFG 120

Query: 121 LNS-----SPTLDISPTSKPSTDVDAQNFFPKFSPQLKREGS------GVSSLIDMEMEK 180
           + +     S  +D+SP SK S +++A    P+F+ Q+K E S      GVSS+ DM ME 
Sbjct: 121 IQANYDYLSGNIDVSPGSKRSREMEALFSSPEFTSQMKGEQSSGQVPTGVSSMSDMNMEN 180

Query: 181 LLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAV 240
           L+EDSV  RVRAKRGCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADMLEEAV
Sbjct: 181 LMEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAV 240

Query: 241 EYVKFLQKQIQELTEHQRRCKCMVKE 245
           EYVK LQ+QIQELTE Q+RC C+ KE
Sbjct: 241 EYVKVLQRQIQELTEEQKRCTCIPKE 260

[Close]

BLAST of Cucsa.061590 vs. Swiss-Prot
Match: BH080_ARATH (Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.9e-67
Identity = 145/263 (55.13%), Postives = 181/263 (68.82%), Query Frame = 1


Query: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60
           MQST  +  ++            +GL+R RSAPA W+E LLE+DEE+ LKPN CLT+LL 
Sbjct: 1   MQSTHISGGSSGGGGGGGGEVSRSGLSRIRSAPATWIETLLEEDEEEGLKPNLCLTELLT 60

Query: 61  ANS-------SDLDS----APADHPLFDPNPSPAFHRQNSSPPEFLAPSGIA-EGFYTSY 120
            N+       S  DS    +  +  L++ +    FHRQNSSP +FL+ SG   +G+++++
Sbjct: 61  GNNNSGGVITSRDDSFEFLSSVEQGLYNHHQGGGFHRQNSSPADFLSGSGSGTDGYFSNF 120

Query: 121 PLNS-----SPTLDISPTSKPSTDVDAQNFFPKFSPQLKRE--GSGVSSLIDMEMEKLLE 180
            + +     S  +DISPT K S D++ Q     FS QLK E    G+S ++DM M+K+ E
Sbjct: 121 GIPANYDYLSTNVDISPT-KRSRDMETQ-----FSSQLKEEQMSGGISGMMDMNMDKIFE 180

Query: 181 DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYV 240
           DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIR+LQE+VPNMDKQTNTADMLEEAVEYV
Sbjct: 181 DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYV 240

Query: 241 KFLQKQIQELTEHQRRCKCMVKE 245
           K LQ QIQELTE Q+RCKC  KE
Sbjct: 241 KALQSQIQELTEQQKRCKCKPKE 257

[Close]

BLAST of Cucsa.061590 vs. Swiss-Prot
Match: BH130_ARATH (Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.7e-32
Identity = 65/104 (62.50%), Postives = 85/104 (81.73%), Query Frame = 1


Query: 141 LKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEV 200
           L +  S  S ++ ++    L+DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQE+
Sbjct: 252 LPKSSSTASDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 311

Query: 201 VPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE 245
           VPNMDKQTNT+DML+ AV+Y+K LQ+Q + L +++  CKCM KE
Sbjct: 312 VPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNKE 355

HSP 2 Score: 32.7 bits (73), Expect = 6.8e+00
Identity = 30/94 (31.91%), Postives = 47/94 (50.00%), Query Frame = 1


Query: 23  GAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLAAN--SSDLDSAPAD--HPLFDP 82
           G+GL RFRSAP++ L A ++DD+      +  L++ + +N  + DL S   +   P+   
Sbjct: 14  GSGLLRFRSAPSSVLAAFVDDDKIG-FDSDRLLSRFVTSNGVNGDLGSPKFEDKSPVSLT 73

Query: 83  NPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNS 113
           N S ++      PP+ L PS    G    YP  S
Sbjct: 74  NTSVSYAATLPPPPQ-LEPSSFL-GLPPHYPRQS 104

[Close]

BLAST of Cucsa.061590 vs. Swiss-Prot
Match: BH122_ARATH (Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.7e-30
Identity = 65/102 (63.73%), Postives = 83/102 (81.37%), Query Frame = 1


Query: 139 PQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ 198
           P L    S   SL D+  E+LL DS+PC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQ
Sbjct: 277 PPLAHHMSLPKSLSDI--EQLLSDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQ 336

Query: 199 EVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 241
           ++VPNMD QTNTADML+ AV+Y+K LQ+Q++ L E + RC+C
Sbjct: 337 DLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRC 376

[Close]

BLAST of Cucsa.061590 vs. Swiss-Prot
Match: BH128_ARATH (Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 9.4e-26
Identity = 64/127 (50.39%), Postives = 84/127 (66.14%), Query Frame = 1


Query: 118 ISPTSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATH 177
           ++  SK S D+D+  F     P      S  S        +L EDSVPC++RAKRGCATH
Sbjct: 239 VTRPSKRSKDMDSGLFSQYSLP------SDTSMNYMDNFMQLPEDSVPCKIRAKRGCATH 298

Query: 178 PRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRR 237
           PRSIAER RRTRIS +++KLQ++VPNMDKQT+ +DML+ AV+++K LQ Q+Q L + Q  
Sbjct: 299 PRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQEN 358

Query: 238 CKCMVKE 245
           C C   E
Sbjct: 359 CTCGCSE 359

HSP 2 Score: 32.0 bits (71), Expect = 1.2e+01
Identity = 14/37 (37.84%), Postives = 29/37 (78.38%), Query Frame = 1


Query: 8  ASTATATASSRTSA-GGAGLARFRSAPAAWLEALLED 44
          +S++T+++S R+S  GG GL R+ SAP ++L +++++
Sbjct: 4  SSSSTSSSSQRSSLPGGGGLIRYGSAPGSFLNSVVDE 40

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BLAST of Cucsa.061590 vs. TrEMBL
Match: A0A0A0KY01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652220 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 2.9e-135
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1


Query: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60
           MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA
Sbjct: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60

Query: 61  ANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120
           ANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP
Sbjct: 61  ANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120

Query: 121 TSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180
           TSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS
Sbjct: 121 TSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180

Query: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240
           IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC
Sbjct: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240

Query: 241 MVKE 245
           MVKE
Sbjct: 241 MVKE 244

[Close]

BLAST of Cucsa.061590 vs. TrEMBL
Match: A0A061FKW9_THECC (Basic helix-loop-helix DNA-binding superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_036484 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.9e-74
Identity = 164/264 (62.12%), Postives = 186/264 (70.45%), Query Frame = 1


Query: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60
           MQ T G + +++            GLARFRSAPA WLEALLE++EEDPLKPN CLTQLL 
Sbjct: 1   MQPTPGGSGSSSGGGGGGGELSRGGLARFRSAPATWLEALLEEEEEDPLKPNQCLTQLLT 60

Query: 61  ANSSD---LDSAPADHP-----LFDPNPSPAFHRQNSSPPEFLAP-SGIAEGFYTS---Y 120
           ANS+     DS P         LF+P     F RQNSSP +FL   SG A   Y S    
Sbjct: 61  ANSTTPATRDSGPFSSSADPAGLFEPT---GFQRQNSSPADFLGNNSGAASDAYFSNFGI 120

Query: 121 PLNS---SPTLDISPTSKPSTDVDAQNFFPKFSPQLKRE-----GSGVSSLIDMEMEKLL 180
           P N    SP +D SP+SK + ++D Q    KF  QLK E      SGVS+LID++MEKLL
Sbjct: 121 PANYDYLSPNIDASPSSKRARELDTQYPPTKFQSQLKGEQRGQISSGVSNLIDVDMEKLL 180

Query: 181 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEY 240
           EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADML+EAVEY
Sbjct: 181 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVEY 240

Query: 241 VKFLQKQIQELTEHQRRCKCMVKE 245
           VK+LQKQI+ELTEHQR+CKC  KE
Sbjct: 241 VKYLQKQIEELTEHQRKCKCKTKE 261

[Close]

BLAST of Cucsa.061590 vs. TrEMBL
Match: A0A0B0NRZ3_GOSAR (Transcription factor bHLH80-like protein OS=Gossypium arboreum GN=F383_04086 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.8e-74
Identity = 157/259 (60.62%), Postives = 192/259 (74.13%), Query Frame = 1


Query: 12  TATASSRTSAGGA-----GLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLAANSSD- 71
           T   SS +S GGA     GLARFRSAPA WLEALLE++EEDPLKP+ CLTQLL  NSS  
Sbjct: 4   TPGGSSSSSGGGAEGSRAGLARFRSAPATWLEALLEEEEEDPLKPSQCLTQLLTGNSSST 63

Query: 72  --------LDSAPADHPLFDPNPSPAFHRQNSSPPEFLA--PSGIAEGFYTSYPLNS--- 131
                     ++     LF+P+    F RQNSSP +FL   P+  ++ +++++ + +   
Sbjct: 64  PTIRNSLLFPNSADPSGLFEPS---GFQRQNSSPADFLGNNPAAASDAYFSNFGVAANYD 123

Query: 132 --SPTLDISPTSKPSTDVDAQNFFPKFSPQLKREGS-----GVSSLIDMEMEKLLEDSVP 191
             SPT+D+SP+SK ++++D Q    KF  QLK E S     G+S+LID++MEKLLEDSVP
Sbjct: 124 YLSPTMDVSPSSKRASELDTQFPPTKFHSQLKGEPSDQISGGISNLIDVDMEKLLEDSVP 183

Query: 192 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQ 245
           CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADMLEEAVEYVK+LQ
Sbjct: 184 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKYLQ 243

[Close]

BLAST of Cucsa.061590 vs. TrEMBL
Match: A0A0D2S5I7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G138300 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 9.3e-73
Identity = 155/259 (59.85%), Postives = 191/259 (73.75%), Query Frame = 1


Query: 12  TATASSRTSAGGA-----GLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLAANSSD- 71
           T   SS +S GGA     GLARFRSAPA WLEALLE++EEDPLKP+ CLTQLL  NS+  
Sbjct: 4   TPGGSSSSSGGGAEGSRAGLARFRSAPATWLEALLEEEEEDPLKPSQCLTQLLTGNSTST 63

Query: 72  --------LDSAPADHPLFDPNPSPAFHRQNSSPPEFLA--PSGIAEGFYTSYPLNS--- 131
                     ++     LF+P+    F RQNSSP +F    P+  ++ +++++ + +   
Sbjct: 64  PTIRNSLLFPNSAYPSGLFEPS---GFQRQNSSPADFPGNNPAASSDAYFSNFGVVANYD 123

Query: 132 --SPTLDISPTSKPSTDVDAQNFFPKFSPQLKREGS-----GVSSLIDMEMEKLLEDSVP 191
             SPT+D+SP+SK ++++D Q    KF  QLK E S     G+S+LID++MEKLLEDSVP
Sbjct: 124 YLSPTMDVSPSSKRASELDTQFPPTKFHSQLKGEPSDQISGGISNLIDVDMEKLLEDSVP 183

Query: 192 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQ 245
           CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADMLEEAVEYVK+LQ
Sbjct: 184 CRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKYLQ 243

[Close]

BLAST of Cucsa.061590 vs. TrEMBL
Match: A0A087GD52_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G431300 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.9e-70
Identity = 150/241 (62.24%), Postives = 179/241 (74.27%), Query Frame = 1


Query: 11  ATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLAANSSDL---D 70
           +T    +    GG+GLAR RSAPA W+E LLEDDEED LKPN CLT+LL  NS ++   D
Sbjct: 3   STHVGGNSGGGGGSGLARIRSAPANWIETLLEDDEEDALKPNLCLTELLTGNSGEITSRD 62

Query: 71  SAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGI-AEGFYTSYPLNSS-PTLDISPTSKPS 130
           S     P+ + N    FHRQNSSP +FL+ SG  ++GF++++ + +S   +D+SP SK S
Sbjct: 63  SFEFPSPV-EYNHQGGFHRQNSSPADFLSGSGAGSDGFFSNFGIPASYDYVDMSPVSKRS 122

Query: 131 TDVDAQNFFPKFSPQLKRE--GSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAE 190
            ++DA      FS Q+K E    GVS ++DM M+KLLEDSVPCRVRAKRGCATHPRSIAE
Sbjct: 123 REMDAH-----FSSQMKEEEMSGGVSGMMDMNMDKLLEDSVPCRVRAKRGCATHPRSIAE 182

Query: 191 RVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVK 245
           RVRRTRISDRIR+LQE+VPNMDKQTNTADMLEEAVEYVK LQ QIQELTE QRRC C  K
Sbjct: 183 RVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQIQELTEQQRRCVCKPK 237

[Close]

BLAST of Cucsa.061590 vs. TAIR10
Match: AT4G09180.1 (AT4G09180.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 256.9 bits (655), Expect = 1.2e-68
Identity = 149/266 (56.02%), Postives = 181/266 (68.05%), Query Frame = 1


Query: 1   MQSTTGAASTATATASSRTSAGG---AGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQ 60
           MQ T+  +S        R   GG   +GL+R RSAPA WLEALLE+DEE+ LKPN  LT 
Sbjct: 1   MQPTSVGSSGGGDDGGGRGGGGGLSRSGLSRIRSAPATWLEALLEEDEEESLKPNLGLTD 60

Query: 61  LLAANSSDLDSA--------PADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYP 120
           LL  NS+DL ++        P +  L+       FHRQNS+P +FL+ S   +GF  S+ 
Sbjct: 61  LLTGNSNDLPTSRGSFEFPIPVEQGLYQQG---GFHRQNSTPADFLSGS---DGFIQSFG 120

Query: 121 LNS-----SPTLDISPTSKPSTDVDAQNFFPKFSPQLKREGS------GVSSLIDMEMEK 180
           + +     S  +D+SP SK S +++A    P+F+ Q+K E S      GVSS+ DM ME 
Sbjct: 121 IQANYDYLSGNIDVSPGSKRSREMEALFSSPEFTSQMKGEQSSGQVPTGVSSMSDMNMEN 180

Query: 181 LLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAV 240
           L+EDSV  RVRAKRGCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADMLEEAV
Sbjct: 181 LMEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAV 240

Query: 241 EYVKFLQKQIQELTEHQRRCKCMVKE 245
           EYVK LQ+QIQELTE Q+RC C+ KE
Sbjct: 241 EYVKVLQRQIQELTEEQKRCTCIPKE 260

[Close]

BLAST of Cucsa.061590 vs. TAIR10
Match: AT1G35460.1 (AT1G35460.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 255.8 bits (652), Expect = 2.8e-68
Identity = 145/263 (55.13%), Postives = 181/263 (68.82%), Query Frame = 1


Query: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60
           MQST  +  ++            +GL+R RSAPA W+E LLE+DEE+ LKPN CLT+LL 
Sbjct: 1   MQSTHISGGSSGGGGGGGGEVSRSGLSRIRSAPATWIETLLEEDEEEGLKPNLCLTELLT 60

Query: 61  ANS-------SDLDS----APADHPLFDPNPSPAFHRQNSSPPEFLAPSGIA-EGFYTSY 120
            N+       S  DS    +  +  L++ +    FHRQNSSP +FL+ SG   +G+++++
Sbjct: 61  GNNNSGGVITSRDDSFEFLSSVEQGLYNHHQGGGFHRQNSSPADFLSGSGSGTDGYFSNF 120

Query: 121 PLNS-----SPTLDISPTSKPSTDVDAQNFFPKFSPQLKRE--GSGVSSLIDMEMEKLLE 180
            + +     S  +DISPT K S D++ Q     FS QLK E    G+S ++DM M+K+ E
Sbjct: 121 GIPANYDYLSTNVDISPT-KRSRDMETQ-----FSSQLKEEQMSGGISGMMDMNMDKIFE 180

Query: 181 DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYV 240
           DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIR+LQE+VPNMDKQTNTADMLEEAVEYV
Sbjct: 181 DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYV 240

Query: 241 KFLQKQIQELTEHQRRCKCMVKE 245
           K LQ QIQELTE Q+RCKC  KE
Sbjct: 241 KALQSQIQELTEQQKRCKCKPKE 257

[Close]

BLAST of Cucsa.061590 vs. TAIR10
Match: AT2G42280.1 (AT2G42280.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 139.0 bits (349), Expect = 3.8e-33
Identity = 65/104 (62.50%), Postives = 85/104 (81.73%), Query Frame = 1


Query: 141 LKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEV 200
           L +  S  S ++ ++    L+DSVPC++RAKRGCATHPRSIAERVRRTRIS+R+RKLQE+
Sbjct: 252 LPKSSSTASDMVSVDKYLQLQDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQEL 311

Query: 201 VPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVKE 245
           VPNMDKQTNT+DML+ AV+Y+K LQ+Q + L +++  CKCM KE
Sbjct: 312 VPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNKE 355

HSP 2 Score: 32.7 bits (73), Expect = 3.8e-01
Identity = 30/94 (31.91%), Postives = 47/94 (50.00%), Query Frame = 1


Query: 23  GAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLAAN--SSDLDSAPAD--HPLFDP 82
           G+GL RFRSAP++ L A ++DD+      +  L++ + +N  + DL S   +   P+   
Sbjct: 14  GSGLLRFRSAPSSVLAAFVDDDKIG-FDSDRLLSRFVTSNGVNGDLGSPKFEDKSPVSLT 73

Query: 83  NPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNS 113
           N S ++      PP+ L PS    G    YP  S
Sbjct: 74  NTSVSYAATLPPPPQ-LEPSSFL-GLPPHYPRQS 104

[Close]

BLAST of Cucsa.061590 vs. TAIR10
Match: AT1G51140.1 (AT1G51140.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-31
Identity = 65/102 (63.73%), Postives = 83/102 (81.37%), Query Frame = 1


Query: 139 PQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ 198
           P L    S   SL D+  E+LL DS+PC++RAKRGCATHPRSIAERVRRT+IS+R+RKLQ
Sbjct: 277 PPLAHHMSLPKSLSDI--EQLLSDSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQ 336

Query: 199 EVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 241
           ++VPNMD QTNTADML+ AV+Y+K LQ+Q++ L E + RC+C
Sbjct: 337 DLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRARCRC 376

[Close]

BLAST of Cucsa.061590 vs. TAIR10
Match: AT1G05805.1 (AT1G05805.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 118.6 bits (296), Expect = 5.3e-27
Identity = 64/127 (50.39%), Postives = 84/127 (66.14%), Query Frame = 1


Query: 118 ISPTSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATH 177
           ++  SK S D+D+  F     P      S  S        +L EDSVPC++RAKRGCATH
Sbjct: 239 VTRPSKRSKDMDSGLFSQYSLP------SDTSMNYMDNFMQLPEDSVPCKIRAKRGCATH 298

Query: 178 PRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRR 237
           PRSIAER RRTRIS +++KLQ++VPNMDKQT+ +DML+ AV+++K LQ Q+Q L + Q  
Sbjct: 299 PRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQEN 358

Query: 238 CKCMVKE 245
           C C   E
Sbjct: 359 CTCGCSE 359

HSP 2 Score: 32.0 bits (71), Expect = 6.5e-01
Identity = 14/37 (37.84%), Postives = 29/37 (78.38%), Query Frame = 1


Query: 8  ASTATATASSRTSA-GGAGLARFRSAPAAWLEALLED 44
          +S++T+++S R+S  GG GL R+ SAP ++L +++++
Sbjct: 4  SSSSTSSSSQRSSLPGGGGLIRYGSAPGSFLNSVVDE 40

[Close]

BLAST of Cucsa.061590 vs. NCBI nr
Match: gi|449447621|ref|XP_004141566.1| (PREDICTED: transcription factor bHLH81 isoform X1 [Cucumis sativus])

HSP 1 Score: 489.2 bits (1258), Expect = 4.2e-135
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1


Query: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60
           MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA
Sbjct: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60

Query: 61  ANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120
           ANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP
Sbjct: 61  ANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120

Query: 121 TSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180
           TSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS
Sbjct: 121 TSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180

Query: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240
           IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC
Sbjct: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240

Query: 241 MVKE 245
           MVKE
Sbjct: 241 MVKE 244

[Close]

BLAST of Cucsa.061590 vs. NCBI nr
Match: gi|659119475|ref|XP_008459678.1| (PREDICTED: transcription factor bHLH80 isoform X1 [Cucumis melo])

HSP 1 Score: 471.1 bits (1211), Expect = 1.2e-129
Identity = 237/244 (97.13%), Postives = 238/244 (97.54%), Query Frame = 1


Query: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60
           MQSTTGAA  ATATASSRTS GG GLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA
Sbjct: 1   MQSTTGAA--ATATASSRTSGGGPGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60

Query: 61  ANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120
           ANSSDL SAP DHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP
Sbjct: 61  ANSSDLVSAPGDHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120

Query: 121 TSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180
           TSKP+TDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS
Sbjct: 121 TSKPATDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180

Query: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240
           IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC
Sbjct: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240

Query: 241 MVKE 245
           MVKE
Sbjct: 241 MVKE 242

[Close]

BLAST of Cucsa.061590 vs. NCBI nr
Match: gi|778708105|ref|XP_011656122.1| (PREDICTED: transcription factor bHLH81 isoform X2 [Cucumis sativus])

HSP 1 Score: 434.9 bits (1117), Expect = 9.5e-119
Identity = 222/244 (90.98%), Postives = 222/244 (90.98%), Query Frame = 1


Query: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60
           MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA
Sbjct: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60

Query: 61  ANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120
           ANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP
Sbjct: 61  ANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120

Query: 121 TSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180
           TSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS
Sbjct: 121 TSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180

Query: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240
           IAER                      QTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC
Sbjct: 181 IAER----------------------QTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 222

Query: 241 MVKE 245
           MVKE
Sbjct: 241 MVKE 222

[Close]

BLAST of Cucsa.061590 vs. NCBI nr
Match: gi|659119477|ref|XP_008459679.1| (PREDICTED: transcription factor bHLH80 isoform X2 [Cucumis melo])

HSP 1 Score: 416.8 bits (1070), Expect = 2.7e-113
Identity = 215/244 (88.11%), Postives = 216/244 (88.52%), Query Frame = 1


Query: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60
           MQSTTGAA  ATATASSRTS GG GLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA
Sbjct: 1   MQSTTGAA--ATATASSRTSGGGPGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60

Query: 61  ANSSDLDSAPADHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120
           ANSSDL SAP DHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP
Sbjct: 61  ANSSDLVSAPGDHPLFDPNPSPAFHRQNSSPPEFLAPSGIAEGFYTSYPLNSSPTLDISP 120

Query: 121 TSKPSTDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180
           TSKP+TDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS
Sbjct: 121 TSKPATDVDAQNFFPKFSPQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRS 180

Query: 181 IAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 240
           IAER                      QTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC
Sbjct: 181 IAER----------------------QTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKC 220

Query: 241 MVKE 245
           MVKE
Sbjct: 241 MVKE 220

[Close]

BLAST of Cucsa.061590 vs. NCBI nr
Match: gi|590603789|ref|XP_007020097.1| (Basic helix-loop-helix DNA-binding superfamily protein isoform 2 [Theobroma cacao])

HSP 1 Score: 286.6 bits (732), Expect = 4.2e-74
Identity = 164/264 (62.12%), Postives = 186/264 (70.45%), Query Frame = 1


Query: 1   MQSTTGAASTATATASSRTSAGGAGLARFRSAPAAWLEALLEDDEEDPLKPNPCLTQLLA 60
           MQ T G + +++            GLARFRSAPA WLEALLE++EEDPLKPN CLTQLL 
Sbjct: 1   MQPTPGGSGSSSGGGGGGGELSRGGLARFRSAPATWLEALLEEEEEDPLKPNQCLTQLLT 60

Query: 61  ANSSD---LDSAPADHP-----LFDPNPSPAFHRQNSSPPEFLAP-SGIAEGFYTS---Y 120
           ANS+     DS P         LF+P     F RQNSSP +FL   SG A   Y S    
Sbjct: 61  ANSTTPATRDSGPFSSSADPAGLFEPT---GFQRQNSSPADFLGNNSGAASDAYFSNFGI 120

Query: 121 PLNS---SPTLDISPTSKPSTDVDAQNFFPKFSPQLKRE-----GSGVSSLIDMEMEKLL 180
           P N    SP +D SP+SK + ++D Q    KF  QLK E      SGVS+LID++MEKLL
Sbjct: 121 PANYDYLSPNIDASPSSKRARELDTQYPPTKFQSQLKGEQRGQISSGVSNLIDVDMEKLL 180

Query: 181 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEY 240
           EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQE+VPNMDKQTNTADML+EAVEY
Sbjct: 181 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVEY 240

Query: 241 VKFLQKQIQELTEHQRRCKCMVKE 245
           VK+LQKQI+ELTEHQR+CKC  KE
Sbjct: 241 VKYLQKQIEELTEHQRKCKCKTKE 261

The following BLAST results are available for this feature:

BLAST of Cucsa.061590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH081_ARATH	2.2e-67	56.02	Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2 SV=1	[more]
BH080_ARATH	4.9e-67	55.13	Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=2 SV=1	[more]
BH130_ARATH	6.7e-32	62.50	Transcription factor bHLH130 OS=Arabidopsis thaliana GN=BHLH130 PE=1 SV=1	[more]
BH122_ARATH	3.7e-30	63.73	Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122 PE=1 SV=1	[more]
BH128_ARATH	9.4e-26	50.39	Transcription factor bHLH128 OS=Arabidopsis thaliana GN=BHLH128 PE=1 SV=1	[more]

BLAST of Cucsa.061590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY01_CUCSA	2.9e-135	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652220 PE=4 SV=1	[more]
A0A061FKW9_THECC	2.9e-74	62.12	Basic helix-loop-helix DNA-binding superfamily protein isoform 2 OS=Theobroma ca...	[more]
A0A0B0NRZ3_GOSAR	3.8e-74	60.62	Transcription factor bHLH80-like protein OS=Gossypium arboreum GN=F383_04086 PE=...	[more]
A0A0D2S5I7_GOSRA	9.3e-73	59.85	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G138300 PE=4 SV=1	[more]
A0A087GD52_ARAAL	1.9e-70	62.24	Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G431300 PE=4 SV=1	[more]

BLAST of Cucsa.061590 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G09180.1	1.2e-68	56.02	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G35460.1	2.8e-68	55.13	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G42280.1	3.8e-33	62.50	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G51140.1	2.1e-31	63.73	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G05805.1	5.3e-27	50.39	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Cucsa.061590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447621\|ref\|XP_004141566.1\|	4.2e-135	100.00	PREDICTED: transcription factor bHLH81 isoform X1 [Cucumis sativus]	[more]
gi\|659119475\|ref\|XP_008459678.1\|	1.2e-129	97.13	PREDICTED: transcription factor bHLH80 isoform X1 [Cucumis melo]	[more]
gi\|778708105\|ref\|XP_011656122.1\|	9.5e-119	90.98	PREDICTED: transcription factor bHLH81 isoform X2 [Cucumis sativus]	[more]
gi\|659119477\|ref\|XP_008459679.1\|	2.7e-113	88.11	PREDICTED: transcription factor bHLH80 isoform X2 [Cucumis melo]	[more]
gi\|590603789\|ref\|XP_007020097.1\|	4.2e-74	62.12	Basic helix-loop-helix DNA-binding superfamily protein isoform 2 [Theobroma caca...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.061590.1	Cucsa.061590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 179..238 score: 3.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 180..225 score: 8.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 180..230 score: 4.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 174..224 score: 14
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 177..241 score: 1.23
None	No IPR available	unknown	Coil	Coil	coord: 214..234 scor
None	No IPR available	PANTHER	PTHR16223	FAMILY NOT NAMED	coord: 148..241 score: 1.1
None	No IPR available	PANTHER	PTHR16223:SF29	TRANSCRIPTION FACTOR BHLH117-RELATED	coord: 148..241 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.061590	Cla003872	Watermelon (97103) v1	cgywmB051
Cucsa.061590	Csa5G652220	Cucumber (Chinese Long) v2	cgycuB047
Cucsa.061590	MELO3C022222	Melon (DHL92) v3.5.1	cgymeB051
Cucsa.061590	ClCG08G000260	Watermelon (Charleston Gray)	cgywcgB052
Cucsa.061590	CSPI05G31450	Wild cucumber (PI 183967)	cgycpiB047
Cucsa.061590	CmaCh09G012210	Cucurbita maxima (Rimu)	cgycmaB0087
Cucsa.061590	CmoCh09G013280	Cucurbita moschata (Rifu)	cgycmoB0082
Cucsa.061590	Lsi08G000180	Bottle gourd (USVL1VR-Ls)	cgylsiB051
Cucsa.061590	Cp4.1LG06g10120	Cucurbita pepo (Zucchini)	cgycpeB0084
Cucsa.061590	MELO3C022222.2	Melon (DHL92) v3.6.1	cgymedB050
Cucsa.061590	CsaV3_5G040480	Cucumber (Chinese Long) v3	cgycucB049
Cucsa.061590	Cla97C08G144700	Watermelon (97103) v2	cgywmbB051
Cucsa.061590	Bhi06G000239	Wax gourd	cgywgoB052
Cucsa.061590	Carg27182	Silver-seed gourd	carcgyB0982

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.061590	Wax gourd	cgywgoB053