ClCG06G015330 (gene) Watermelon (Charleston Gray)

Overview
NameClCG06G015330
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionSOB five-like 1 LENGTH=148
LocationCG_Chr06 : 28653517 .. 28653939 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACCTTCCCAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCTAATGGTTCAAGTGATGCAGCTTCTGATGAAGATGAGGATGAAGATAAAGAACATAAAGGCTATTATTATGCAGCAAATAACCAAGATGACAGTGATGATTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCAACAAGAACATCAATTTAAAGGGATGAAAAATCCTCATGGTGAAGTAAAGTCTTGCTTAGAAACAAAAACCAAGAAGCCATTAATGGAAAAGAAGAAGCAAAGAGCTGAGAAAAAAGAAGTCAAAGTGGGACAAAAGCCTAAGAGTTCAGTTCAAAGCAGTTCTAAGGTAAGAAAAAGCATCTTGATGGGTAAAAGAAACTAG

mRNA sequence

ATGGAACCTTCCCAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCTAATGGTTCAAGTGATGCAGCTTCTGATGAAGATGAGGATGAAGATAAAGAACATAAAGGCTATTATTATGCAGCAAATAACCAAGATGACAGTGATGATTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCAACAAGAACATCAATTTAAAGGGATGAAAAATCCTCATGGTGAAGTAAAGTCTTGCTTAGAAACAAAAACCAAGAAGCCATTAATGGAAAAGAAGAAGCAAAGAGCTGAGAAAAAAGAAGTCAAAGTGGGACAAAAGCCTAAGAGTTCAGTTCAAAGCAGTTCTAAGGTAAGAAAAAGCATCTTGATGGGTAAAAGAAACTAG

Coding sequence (CDS)

ATGGAACCTTCCCAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCTAATGGTTCAAGTGATGCAGCTTCTGATGAAGATGAGGATGAAGATAAAGAACATAAAGGCTATTATTATGCAGCAAATAACCAAGATGACAGTGATGATTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCAACAAGAACATCAATTTAAAGGGATGAAAAATCCTCATGGTGAAGTAAAGTCTTGCTTAGAAACAAAAACCAAGAAGCCATTAATGGAAAAGAAGAAGCAAAGAGCTGAGAAAAAAGAAGTCAAAGTGGGACAAAAGCCTAAGAGTTCAGTTCAAAGCAGTTCTAAGGTAAGAAAAAGCATCTTGATGGGTAAAAGAAACTAG

Protein sequence

MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAANNQDDSDDSMASDASSGPSHQQEHQFKGMKNPHGEVKSCLETKTKKPLMEKKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKRN
Homology
[Close]
BLAST of ClCG06G015330 vs. TrEMBL
Match: A0A0A0LUQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014530 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 7.2e-54
Identity = 113/146 (77.40%), Postives = 126/146 (86.30%), Query Frame = 1 

Query: 1   MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAANNQDDS- 60
           MEPSQIFGVSEECHSSESGWTMYIGSPAN  S  A+ +D+DED+EHKGYYYAANN +DS 
Sbjct: 1   MEPSQIFGVSEECHSSESGWTMYIGSPANDDSSDAASDDDDEDEEHKGYYYAANNHNDSD 60

Query: 61  DDSMASDASSGPSHQQ--EHQFKGMKNPHGEVKSCLET--KTKKPLME-KKKQRAEKKEV 120
           DDSMASDASSGP HQ+   + FKGMKNP+GE+  CLET    +KPLME KKKQRAE+KEV
Sbjct: 61  DDSMASDASSGPCHQKGNHNPFKGMKNPNGEMNFCLETTRTVRKPLMEKKKKQRAERKEV 120

Query: 121 KVGQKPKSSVQSSSKVRKSILMGKRN 141
           +VGQKPK+SVQSSSKVRKSILM KRN
Sbjct: 121 QVGQKPKTSVQSSSKVRKSILMSKRN 146

[Close]
BLAST of ClCG06G015330 vs. TrEMBL
Match: A0A061FYA0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014436 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-23
Identity = 77/162 (47.53%), Postives = 93/162 (57.41%), Query Frame = 1 

Query: 1   MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAA-----NN 60
           MEPS+I G +EECHSSESGWTMYIGSP  G  D   D   D D     Y   A     N+
Sbjct: 1   MEPSKILGGTEECHSSESGWTMYIGSPIQGGDDDDDDGHSDADAYAANYGGHADETEINH 60

Query: 61  QDDSDDSMASDASSGPSHQQEHQFKGMKNPH----------GEVKSCLETKTKKPLMEKK 120
           + DSDDSMASDASSGPSH Q H++  M+  H          GE    L+ + KK L EK+
Sbjct: 61  EADSDDSMASDASSGPSH-QGHRYGNMEEGHGTSHLNDEVEGEGNYYLDKEAKKSL-EKQ 120

Query: 121 KQRAEKKEVKVGQKPKSSV--------QSSSKVRKSILMGKR 140
           K   +KKE K  QK + ++        +S SKVRKSI +GKR
Sbjct: 121 KLGMKKKEDKEDQKERMTLKAKGAATPRSGSKVRKSIWLGKR 160

[Close]
BLAST of ClCG06G015330 vs. TrEMBL
Match: A0A0D2MM36_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G104300 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.6e-21
Identity = 67/156 (42.95%), Postives = 93/156 (59.62%), Query Frame = 1 

Query: 1   MEPSQIFGVSEECHSSESGWTMYIG-SPANGSSDAASDEDEDEDKEHKGYYYA------- 60
           MEPS IFG +EECHSSESGWTMYIG + A+   DA +D D+D+D +    + +       
Sbjct: 1   MEPSNIFGGAEECHSSESGWTMYIGDAAADDDGDAGTDADDDDDDDDGDRFDSADESQTD 60

Query: 61  ANNQDDSDDSMASDASSGPSHQQEHQFKGMKNPHGEVKSCLETK---------TKKPLME 120
           AN++ ++DDSMASDASSGPSH+ E + +G +    E + C   K          +KP  +
Sbjct: 61  ANHEAETDDSMASDASSGPSHRLEQEVEGEE----EGRHCYSDKKARKSSVGSKQKPETK 120

Query: 121 KKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKR 140
           KK+ + E + +K     +SS QS S  RK+I  GKR
Sbjct: 121 KKQDKEEMRRLKT---KESSTQSPSGSRKNIWFGKR 149

[Close]
BLAST of ClCG06G015330 vs. TrEMBL
Match: B9IFF9_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0015s06520g PE=4 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-20
Identity = 68/145 (46.90%), Postives = 81/145 (55.86%), Query Frame = 1 

Query: 1   MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDE-DKEHKGYYYAANNQDDS 60
           ME SQIF V+EECHSSESGWTMY+GSP         DE  D+ D    G     +  DDS
Sbjct: 72  MESSQIF-VAEECHSSESGWTMYLGSPTQDDDGGDDDEHSDDGDSSDGGGSDNKSYNDDS 131

Query: 61  DDSMASDASSGPSHQQEHQFKGMKNPHGEVKSCLETKTKKPLMEKKKQ--RAEKKEVKVG 120
           DDSMASDASSGPSH      K  ++ H       + K  KP   KK +  R E+KE    
Sbjct: 132 DDSMASDASSGPSHHGIAHLKQEEDKHVGKYQMDQMKANKPKENKKAESGRKEEKEAMAF 191

Query: 121 QKPK---SSVQSSSKVRKSILMGKR 140
            + +   +S QS SKVRK+ LM KR
Sbjct: 192 MEKRANNASAQSGSKVRKTFLMSKR 215

[Close]
BLAST of ClCG06G015330 vs. TrEMBL
Match: K7KNF8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G017200 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-19
Identity = 72/151 (47.68%), Postives = 84/151 (55.63%), Query Frame = 1 

Query: 1   MEPSQIFGVSEECHSSESGWTMYIGSP---ANGSS--DAASDEDEDEDKEHKGYYYAANN 60
           MEP   FG +EECHSSESGWTMYIGS    A G S  D   D+D D+D + +G      +
Sbjct: 1   MEP---FG-AEECHSSESGWTMYIGSSIDDAGGHSTDDGDGDDDNDDDDKEEGTQAHPQD 60

Query: 61  QDDSDDSMASDASSGPSHQQEHQFKGMKNPHGE---VKSCLETKTKKPLMEKKKQRAEKK 120
            D+SDDSMASDASSGPSH   H F   +    E    K C E K  K   + K+   EK 
Sbjct: 61  DDESDDSMASDASSGPSH--HHGFADFRRDSEEGNHDKYCFEKKASK--TQHKQMEGEKV 120

Query: 121 EVK----VGQKPKSSVQSSSKVRKSILMGKR 140
           E K    V  K KS VQ   KVRK+  +GKR
Sbjct: 121 EKKGMLPVDSKDKSPVQGCGKVRKNYFVGKR 143

[Close]
BLAST of ClCG06G015330 vs. TAIR10
Match: AT5G38790.1 (AT5G38790.1 unknown protein)

HSP 1 Score: 66.2 bits (160), Expect = 1.8e-11
Identity = 39/79 (49.37%), Postives = 44/79 (55.70%), Query Frame = 1 

Query: 11 EECHSSESGWTMYIGSPANGSSDAASDEDE--DEDKEHKGY---------YYAANNQDDS 70
          EEC SSESGWT Y+ SP         DEDE  DED  ++GY          +      DS
Sbjct: 4  EECSSSESGWTTYLSSPIK------VDEDEVVDEDYYYEGYNIYNYSSKVEHEEERNKDS 63

Query: 71 DDSMASDASSGPSHQQEHQ 79
          DDSMASDASSGP++Q+ HQ
Sbjct: 64 DDSMASDASSGPNYQRFHQ 76

[Close]
BLAST of ClCG06G015330 vs. TAIR10
Match: AT3G30580.1 (AT3G30580.1 unknown protein)

HSP 1 Score: 63.2 bits (152), Expect = 1.5e-10
Identity = 45/125 (36.00%), Postives = 61/125 (48.80%), Query Frame = 1 

Query: 11  EECHSSESGWTMYIGSPANGSSDAASDEDEDE----DKEHKGYYYAANNQDDSDDSMASD 70
           EEC SSESGWT YI S      +   DE   E    +K+ + Y        DSDDSMASD
Sbjct: 4   EECSSSESGWTTYISSRMEEEEEEVIDEVYYEGHIIEKDRRKYANEYEINKDSDDSMASD 63

Query: 71  ASSGPS-HQQEHQFK-----GMKNPHGEVKSC----LETKTKKPLMEKKKQRAEKKEVKV 122
           ASSGPS HQ  ++ K      ++N  GE        ++ K    L+ +KK++ + +    
Sbjct: 64  ASSGPSYHQTSNRGKRREGLALRNGKGESNDVYSHRIDDKNIGNLISRKKEKKKSENKSR 123

[Close]
BLAST of ClCG06G015330 vs. TAIR10
Match: AT5G08150.1 (AT5G08150.1 suppressor of phytochrome b 5)

HSP 1 Score: 62.8 bits (151), Expect = 2.0e-10
Identity = 38/111 (34.23%), Postives = 53/111 (47.75%), Query Frame = 1 

Query: 1   MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAANNQDDSD 60
           ME + IFG  E+C S ESGWTMY+ S ++   D     D+DE++E            D  
Sbjct: 1   MESANIFGSDEDCRSCESGWTMYLASQSHDRDDDCYYGDDDEEEE----------DSDGG 60

Query: 61  DSMASDASSGPSHQQEHQFKGMKNPHGEVKSCLETKTKKPLMEKKKQRAEK 112
           DSM SDASSGP     +           +K   E + +  + +KKK+  E+
Sbjct: 61  DSMDSDASSGPMEATSY-----------LKLAQEIEEQNSIKKKKKKTNEE 90

[Close]
BLAST of ClCG06G015330 vs. TAIR10
Match: AT1G26210.1 (AT1G26210.1 SOB five-like 1)

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-09
Identity = 50/138 (36.23%), Postives = 68/138 (49.28%), Query Frame = 1 

Query: 11  EECHSSESGWTMYIGSPANGSSDAASDEDEDED----KEHKGYYYAANN-------QDDS 70
           EE  S ESGWTMYI    +G+  ++   D+D+D    KE    Y   +         ++S
Sbjct: 13  EEYSSCESGWTMYIEDAFHGNDQSSVVVDDDDDDTQVKEADDGYENDDGDTSDDGGDEES 72

Query: 71  DDSMASDASSGPSHQ-QEHQFKGMKNPHGEVKSCLETKTKKPLMEKK-KQRAEKKEVKVG 130
           DDSMASDASSGPS+Q  +H  K     +G  +  L+   K+   EK      EK ++K  
Sbjct: 73  DDSMASDASSGPSNQLPKHINKHAARKNGSKQVYLQ---KRQHTEKTISNEGEKSDLKAR 132

Query: 131 QKPK--SSVQSSSKVRKS 134
            +    S VQS  KV K+
Sbjct: 133 TRTSAASRVQSRGKVSKT 147

[Close]
BLAST of ClCG06G015330 vs. TAIR10
Match: AT1G68870.1 (AT1G68870.1 SOB five-like 2)

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-09
Identity = 45/154 (29.22%), Postives = 68/154 (44.16%), Query Frame = 1 

Query: 1   MEPSQIFGVSEECHSSESGWTMYIGSPANGS--------------------SDAASDEDE 60
           ME  +I G +EE  S ESGWTMYI    +G+                     D   DED+
Sbjct: 1   MESPRIHGGAEEKSSCESGWTMYIEDTFHGNHHSEVVYEEEDDGFSVKEVDDDGDGDEDD 60

Query: 61  DEDKEHKGYYYAANNQDDSDDSMASDASSGPS-HQQEHQFKGMKNPHGEVKSCLETKTKK 120
           D+D +        ++ ++SDDSM SDASS PS HQ     K            +  +T+ 
Sbjct: 61  DDDDDDD------SSNNESDDSMTSDASSWPSTHQPPRSTKNHAAAKNSNAKQVNNQTEN 120

Query: 121 PLMEKKKQRAEKKEVKVGQKPKSSVQSSSKVRKS 134
            + ++     E+ E+K   + +++  S  KV K+
Sbjct: 121 RVRDRFSDEGEESELKA--RTRTTAASRVKVSKT 146

[Close]
BLAST of ClCG06G015330 vs. NCBI nr
Match: gi|659106443|ref|XP_008453328.1| (PREDICTED: uncharacterized protein LOC103494080 [Cucumis melo])

HSP 1 Score: 218.8 bits (556), Expect = 6.1e-54
Identity = 113/146 (77.40%), Postives = 127/146 (86.99%), Query Frame = 1 

Query: 1   MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAANNQDDS- 60
           MEPSQIFGVSEECHSSESGWTMYIGSPAN  S  A+ +D+D+D+EHKGYYYAANN +DS 
Sbjct: 1   MEPSQIFGVSEECHSSESGWTMYIGSPANDDSSDAASDDDDKDEEHKGYYYAANNHNDSD 60

Query: 61  DDSMASDASSGPSHQQ--EHQFKGMKNPHGEVKSCLET--KTKKPLME-KKKQRAEKKEV 120
           DDSMASDASSGPSHQ+   + FKGMKNP+GE+  CLET    +KPLME KKKQRAE+KEV
Sbjct: 61  DDSMASDASSGPSHQKGNHNPFKGMKNPNGEMNFCLETTRTVRKPLMEKKKKQRAERKEV 120

Query: 121 KVGQKPKSSVQSSSKVRKSILMGKRN 141
           KVGQKPK+SVQSSSKVRK+ILM KRN
Sbjct: 121 KVGQKPKTSVQSSSKVRKNILMSKRN 146

[Close]
BLAST of ClCG06G015330 vs. NCBI nr
Match: gi|778656162|ref|XP_011648559.1| (PREDICTED: uncharacterized protein LOC105434528 [Cucumis sativus])

HSP 1 Score: 218.0 bits (554), Expect = 1.0e-53
Identity = 113/146 (77.40%), Postives = 126/146 (86.30%), Query Frame = 1 

Query: 1   MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAANNQDDS- 60
           MEPSQIFGVSEECHSSESGWTMYIGSPAN  S  A+ +D+DED+EHKGYYYAANN +DS 
Sbjct: 1   MEPSQIFGVSEECHSSESGWTMYIGSPANDDSSDAASDDDDEDEEHKGYYYAANNHNDSD 60

Query: 61  DDSMASDASSGPSHQQ--EHQFKGMKNPHGEVKSCLET--KTKKPLME-KKKQRAEKKEV 120
           DDSMASDASSGP HQ+   + FKGMKNP+GE+  CLET    +KPLME KKKQRAE+KEV
Sbjct: 61  DDSMASDASSGPCHQKGNHNPFKGMKNPNGEMNFCLETTRTVRKPLMEKKKKQRAERKEV 120

Query: 121 KVGQKPKSSVQSSSKVRKSILMGKRN 141
           +VGQKPK+SVQSSSKVRKSILM KRN
Sbjct: 121 QVGQKPKTSVQSSSKVRKSILMSKRN 146

[Close]
BLAST of ClCG06G015330 vs. NCBI nr
Match: gi|590669210|ref|XP_007037710.1| (Uncharacterized protein TCM_014436 [Theobroma cacao])

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-23
Identity = 77/162 (47.53%), Postives = 93/162 (57.41%), Query Frame = 1 

Query: 1   MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDEDKEHKGYYYAA-----NN 60
           MEPS+I G +EECHSSESGWTMYIGSP  G  D   D   D D     Y   A     N+
Sbjct: 1   MEPSKILGGTEECHSSESGWTMYIGSPIQGGDDDDDDGHSDADAYAANYGGHADETEINH 60

Query: 61  QDDSDDSMASDASSGPSHQQEHQFKGMKNPH----------GEVKSCLETKTKKPLMEKK 120
           + DSDDSMASDASSGPSH Q H++  M+  H          GE    L+ + KK L EK+
Sbjct: 61  EADSDDSMASDASSGPSH-QGHRYGNMEEGHGTSHLNDEVEGEGNYYLDKEAKKSL-EKQ 120

Query: 121 KQRAEKKEVKVGQKPKSSV--------QSSSKVRKSILMGKR 140
           K   +KKE K  QK + ++        +S SKVRKSI +GKR
Sbjct: 121 KLGMKKKEDKEDQKERMTLKAKGAATPRSGSKVRKSIWLGKR 160

[Close]
BLAST of ClCG06G015330 vs. NCBI nr
Match: gi|823145175|ref|XP_012472463.1| (PREDICTED: cation channel sperm-associated protein 2-like [Gossypium raimondii])

HSP 1 Score: 109.4 bits (272), Expect = 5.2e-21
Identity = 67/156 (42.95%), Postives = 93/156 (59.62%), Query Frame = 1 

Query: 1   MEPSQIFGVSEECHSSESGWTMYIG-SPANGSSDAASDEDEDEDKEHKGYYYA------- 60
           MEPS IFG +EECHSSESGWTMYIG + A+   DA +D D+D+D +    + +       
Sbjct: 1   MEPSNIFGGAEECHSSESGWTMYIGDAAADDDGDAGTDADDDDDDDDGDRFDSADESQTD 60

Query: 61  ANNQDDSDDSMASDASSGPSHQQEHQFKGMKNPHGEVKSCLETK---------TKKPLME 120
           AN++ ++DDSMASDASSGPSH+ E + +G +    E + C   K          +KP  +
Sbjct: 61  ANHEAETDDSMASDASSGPSHRLEQEVEGEE----EGRHCYSDKKARKSSVGSKQKPETK 120

Query: 121 KKKQRAEKKEVKVGQKPKSSVQSSSKVRKSILMGKR 140
           KK+ + E + +K     +SS QS S  RK+I  GKR
Sbjct: 121 KKQDKEEMRRLKT---KESSTQSPSGSRKNIWFGKR 149

[Close]
BLAST of ClCG06G015330 vs. NCBI nr
Match: gi|566206219|ref|XP_002321724.2| (hypothetical protein POPTR_0015s06520g, partial [Populus trichocarpa])

HSP 1 Score: 107.5 bits (267), Expect = 2.0e-20
Identity = 68/145 (46.90%), Postives = 81/145 (55.86%), Query Frame = 1 

Query: 1   MEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDEDE-DKEHKGYYYAANNQDDS 60
           ME SQIF V+EECHSSESGWTMY+GSP         DE  D+ D    G     +  DDS
Sbjct: 72  MESSQIF-VAEECHSSESGWTMYLGSPTQDDDGGDDDEHSDDGDSSDGGGSDNKSYNDDS 131

Query: 61  DDSMASDASSGPSHQQEHQFKGMKNPHGEVKSCLETKTKKPLMEKKKQ--RAEKKEVKVG 120
           DDSMASDASSGPSH      K  ++ H       + K  KP   KK +  R E+KE    
Sbjct: 132 DDSMASDASSGPSHHGIAHLKQEEDKHVGKYQMDQMKANKPKENKKAESGRKEEKEAMAF 191

Query: 121 QKPK---SSVQSSSKVRKSILMGKR 140
            + +   +S QS SKVRK+ LM KR
Sbjct: 192 MEKRANNASAQSGSKVRKTFLMSKR 215

The following BLAST results are available for this feature:
BLAST of ClCG06G015330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUQ4_CUCSA7.2e-5477.40Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014530 PE=4 SV=1[more]
A0A061FYA0_THECC1.0e-2347.53Uncharacterized protein OS=Theobroma cacao GN=TCM_014436 PE=4 SV=1[more]
A0A0D2MM36_GOSRA3.6e-2142.95Uncharacterized protein OS=Gossypium raimondii GN=B456_003G104300 PE=4 SV=1[more]
B9IFF9_POPTR1.4e-2046.90Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0015s06520g P... [more]
K7KNF8_SOYBN1.2e-1947.68Uncharacterized protein OS=Glycine max GN=GLYMA_05G017200 PE=4 SV=1[more]
BLAST of ClCG06G015330 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G38790.11.8e-1149.37 unknown protein[more]
AT3G30580.11.5e-1036.00 unknown protein[more]
AT5G08150.12.0e-1034.23 suppressor of phytochrome b 5[more]
AT1G26210.12.2e-0936.23 SOB five-like 1[more]
AT1G68870.12.2e-0929.22 SOB five-like 2[more]
BLAST of ClCG06G015330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659106443|ref|XP_008453328.1|6.1e-5477.40PREDICTED: uncharacterized protein LOC103494080 [Cucumis melo][more]
gi|778656162|ref|XP_011648559.1|1.0e-5377.40PREDICTED: uncharacterized protein LOC105434528 [Cucumis sativus][more]
gi|590669210|ref|XP_007037710.1|1.5e-2347.53Uncharacterized protein TCM_014436 [Theobroma cacao][more]
gi|823145175|ref|XP_012472463.1|5.2e-2142.95PREDICTED: cation channel sperm-associated protein 2-like [Gossypium raimondii][more]
gi|566206219|ref|XP_002321724.2|2.0e-2046.90hypothetical protein POPTR_0015s06520g, partial [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG06G015330.1ClCG06G015330.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33347FAMILY NOT NAMEDcoord: 2..140
score: 3.8
NoneNo IPR availablePANTHERPTHR33347:SF6SUBFAMILY NOT NAMEDcoord: 2..140
score: 3.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG06G015330Csa1G014530Cucumber (Chinese Long) v2cuwcgB068
ClCG06G015330Cla019024Watermelon (97103) v1wcgwmB344
ClCG06G015330Cla97C06G124850Watermelon (97103) v2wcgwmbB273
ClCG06G015330CSPI01G03150Wild cucumber (PI 183967)cpiwcgB074
ClCG06G015330CmaCh10G002720Cucurbita maxima (Rimu)cmawcgB069
ClCG06G015330CmoCh11G002390Cucurbita moschata (Rifu)cmowcgB119
ClCG06G015330Lsi06G013770Bottle gourd (USVL1VR-Ls)lsiwcgB372
ClCG06G015330Cp4.1LG04g14400Cucurbita pepo (Zucchini)cpewcgB616
ClCG06G015330CsGy1G003120Cucumber (Gy14) v2cgybwcgB066
ClCG06G015330Carg17888Silver-seed gourdcarwcgB0451
ClCG06G015330Carg09175Silver-seed gourdcarwcgB0581
ClCG06G015330CsaV3_1G003210Cucumber (Chinese Long) v3cucwcgB077
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG06G015330Cucumber (Chinese Long) v3cucwcgB090
ClCG06G015330Cucumber (Chinese Long) v3cucwcgB420
ClCG06G015330Cucumber (Chinese Long) v3cucwcgB333
ClCG06G015330Watermelon (97103) v2wcgwmbB263
ClCG06G015330Wax gourdwcgwgoB527
ClCG06G015330Wax gourdwcgwgoB542
ClCG06G015330Watermelon (Charleston Gray)wcgwcgB149
ClCG06G015330Watermelon (Charleston Gray)wcgwcgB155
ClCG06G015330Cucumber (Gy14) v1cgywcgB166
ClCG06G015330Cucumber (Gy14) v1cgywcgB366
ClCG06G015330Cucumber (Gy14) v1cgywcgB368
ClCG06G015330Cucumber (Gy14) v1cgywcgB499
ClCG06G015330Cucurbita maxima (Rimu)cmawcgB135
ClCG06G015330Cucurbita maxima (Rimu)cmawcgB208
ClCG06G015330Cucurbita maxima (Rimu)cmawcgB370
ClCG06G015330Cucurbita maxima (Rimu)cmawcgB424
ClCG06G015330Cucurbita maxima (Rimu)cmawcgB666
ClCG06G015330Cucurbita moschata (Rifu)cmowcgB062
ClCG06G015330Cucurbita moschata (Rifu)cmowcgB195
ClCG06G015330Cucurbita moschata (Rifu)cmowcgB364
ClCG06G015330Cucurbita moschata (Rifu)cmowcgB423
ClCG06G015330Wild cucumber (PI 183967)cpiwcgB085
ClCG06G015330Wild cucumber (PI 183967)cpiwcgB334
ClCG06G015330Wild cucumber (PI 183967)cpiwcgB417
ClCG06G015330Cucumber (Chinese Long) v2cuwcgB083
ClCG06G015330Cucumber (Chinese Long) v2cuwcgB400
ClCG06G015330Melon (DHL92) v3.5.1mewcgB064
ClCG06G015330Melon (DHL92) v3.5.1mewcgB159
ClCG06G015330Melon (DHL92) v3.5.1mewcgB254
ClCG06G015330Watermelon (97103) v1wcgwmB326
ClCG06G015330Watermelon (97103) v1wcgwmB339
ClCG06G015330Cucurbita pepo (Zucchini)cpewcgB049
ClCG06G015330Cucurbita pepo (Zucchini)cpewcgB337
ClCG06G015330Cucurbita pepo (Zucchini)cpewcgB401
ClCG06G015330Cucurbita pepo (Zucchini)cpewcgB475
ClCG06G015330Bottle gourd (USVL1VR-Ls)lsiwcgB201
ClCG06G015330Bottle gourd (USVL1VR-Ls)lsiwcgB293
ClCG06G015330Bottle gourd (USVL1VR-Ls)lsiwcgB405
ClCG06G015330Cucumber (Gy14) v2cgybwcgB080
ClCG06G015330Cucumber (Gy14) v2cgybwcgB365
ClCG06G015330Melon (DHL92) v3.6.1medwcgB063
ClCG06G015330Melon (DHL92) v3.6.1medwcgB150
ClCG06G015330Melon (DHL92) v3.6.1medwcgB246
ClCG06G015330Silver-seed gourdcarwcgB0388
ClCG06G015330Silver-seed gourdcarwcgB0817