Cp4.1LG04g14400 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCTTCCCAAAATGTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACCATGTATATTGGATCTCCTGTAGATGATTCCAGTGATGGTGATGAAGATAACGATGTAGAATATGGAAAAAATAAAGGTTTTCATGCAAATCACCAAGATGATAGTGATGACTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGCCATCAACCAGATCACCCTTTTGGAGGACATGGGAGCATGAAACACCAGAAGCCATTAATAGAGAAGCACAGAGATGAGAGGAAGGAAGTGAAAGAGAAGCTGGTTTTGGTGGGGCAAAAACCAAAGAGCTCGGTTCAGAGTAGCTCAAAGGTAAGAAAGAGCATTTGGATGGGCAAAAGAAACTAGCCAAGCTACCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTTTTGTTCTCTGGTTTTTCCTTTATGCTTTCTTGTAGGCTGAAACTGAACTGAAAAATATGAGTTGTGTATCCTTTACTGCTGTTTTTTTGTTTGTTCATCTACATGTATTTCCCTGA ATGGAGTCTTCCCAAAATGTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACCATGTATATTGGATCTCCTGTAGATGATTCCAGTGATGGTGATGAAGATAACGATGTAGAATATGGAAAAAATAAAGGTTTTCATGCAAATCACCAAGATGATAGTGATGACTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGCCATCAACCAGATCACCCTTTTGGAGGACATGGGAGCATGAAACACCAGAAGCCATTAATAGAGAAGCACAGAGATGAGAGGAAGGAAGTGAAAGAGAAGCTGGTTTTGGTGGGGCAAAAACCAAAGAGCTCGGTTCAGAGTAGCTCAAAGGCTGAAACTGAACTGAAAAATATGAGTTGTGTATCCTTTACTGCTGTTTTTTTGTTTGTTCATCTACATGTATTTCCCTGA ATGGAGTCTTCCCAAAATGTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACCATGTATATTGGATCTCCTGTAGATGATTCCAGTGATGGTGATGAAGATAACGATGTAGAATATGGAAAAAATAAAGGTTTTCATGCAAATCACCAAGATGATAGTGATGACTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGCCATCAACCAGATCACCCTTTTGGAGGACATGGGAGCATGAAACACCAGAAGCCATTAATAGAGAAGCACAGAGATGAGAGGAAGGAAGTGAAAGAGAAGCTGGTTTTGGTGGGGCAAAAACCAAAGAGCTCGGTTCAGAGTAGCTCAAAGGCTGAAACTGAACTGAAAAATATGAGTTGTGTATCCTTTACTGCTGTTTTTTTGTTTGTTCATCTACATGTATTTCCCTGA MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNKGFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLIEKHRDERKEVKEKLVLVGQKPKSSVQSSSKAETELKNMSCVSFTAVFLFVHLHVFP
BLAST of Cp4.1LG04g14400 vs. TrEMBL
Match: A0A0A0LUQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014530 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 9.9e-22 Identity = 79/142 (55.63%), Postives = 92/142 (64.79%), Query Frame = 1
BLAST of Cp4.1LG04g14400 vs. TrEMBL
Match: A0A061FYA0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014436 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 4.9e-13 Identity = 67/158 (42.41%), Postives = 87/158 (55.06%), Query Frame = 1
BLAST of Cp4.1LG04g14400 vs. TrEMBL
Match: A0A0D2T3R8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G201100 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.2e-11 Identity = 58/125 (46.40%), Postives = 74/125 (59.20%), Query Frame = 1
BLAST of Cp4.1LG04g14400 vs. TrEMBL
Match: A0A067JKM3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05808 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.2e-11 Identity = 59/117 (50.43%), Postives = 66/117 (56.41%), Query Frame = 1
BLAST of Cp4.1LG04g14400 vs. TrEMBL
Match: B9IFF9_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0015s06520g PE=4 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 2.1e-11 Identity = 61/135 (45.19%), Postives = 78/135 (57.78%), Query Frame = 1
BLAST of Cp4.1LG04g14400 vs. TAIR10
Match: AT5G38790.1 (AT5G38790.1 unknown protein) HSP 1 Score: 51.6 bits (122), Expect = 4.7e-07 Identity = 36/72 (50.00%), Postives = 40/72 (55.56%), Query Frame = 1
BLAST of Cp4.1LG04g14400 vs. NCBI nr
Match: gi|659106443|ref|XP_008453328.1| (PREDICTED: uncharacterized protein LOC103494080 [Cucumis melo]) HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21 Identity = 79/142 (55.63%), Postives = 93/142 (65.49%), Query Frame = 1
BLAST of Cp4.1LG04g14400 vs. NCBI nr
Match: gi|778656162|ref|XP_011648559.1| (PREDICTED: uncharacterized protein LOC105434528 [Cucumis sativus]) HSP 1 Score: 111.3 bits (277), Expect = 1.4e-21 Identity = 79/142 (55.63%), Postives = 92/142 (64.79%), Query Frame = 1
BLAST of Cp4.1LG04g14400 vs. NCBI nr
Match: gi|590669210|ref|XP_007037710.1| (Uncharacterized protein TCM_014436 [Theobroma cacao]) HSP 1 Score: 82.4 bits (202), Expect = 7.1e-13 Identity = 67/158 (42.41%), Postives = 87/158 (55.06%), Query Frame = 1
BLAST of Cp4.1LG04g14400 vs. NCBI nr
Match: gi|1009179984|ref|XP_015871382.1| (PREDICTED: trigger factor-like [Ziziphus jujuba]) HSP 1 Score: 78.6 bits (192), Expect = 1.0e-11 Identity = 64/144 (44.44%), Postives = 83/144 (57.64%), Query Frame = 1
BLAST of Cp4.1LG04g14400 vs. NCBI nr
Match: gi|743933977|ref|XP_011011306.1| (PREDICTED: late secretory pathway protein AVL9-like [Populus euphratica]) HSP 1 Score: 78.2 bits (191), Expect = 1.3e-11 Identity = 62/134 (46.27%), Postives = 78/134 (58.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |