Cp4.1LG04g14400 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG04g14400
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG04 : 11481691 .. 11482243 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCTTCCCAAAATGTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACCATGTATATTGGATCTCCTGTAGATGATTCCAGTGATGGTGATGAAGATAACGATGTAGAATATGGAAAAAATAAAGGTTTTCATGCAAATCACCAAGATGATAGTGATGACTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGCCATCAACCAGATCACCCTTTTGGAGGACATGGGAGCATGAAACACCAGAAGCCATTAATAGAGAAGCACAGAGATGAGAGGAAGGAAGTGAAAGAGAAGCTGGTTTTGGTGGGGCAAAAACCAAAGAGCTCGGTTCAGAGTAGCTCAAAGGTAAGAAAGAGCATTTGGATGGGCAAAAGAAACTAGCCAAGCTACCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTTTTGTTCTCTGGTTTTTCCTTTATGCTTTCTTGTAGGCTGAAACTGAACTGAAAAATATGAGTTGTGTATCCTTTACTGCTGTTTTTTTGTTTGTTCATCTACATGTATTTCCCTGA

mRNA sequence

ATGGAGTCTTCCCAAAATGTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACCATGTATATTGGATCTCCTGTAGATGATTCCAGTGATGGTGATGAAGATAACGATGTAGAATATGGAAAAAATAAAGGTTTTCATGCAAATCACCAAGATGATAGTGATGACTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGCCATCAACCAGATCACCCTTTTGGAGGACATGGGAGCATGAAACACCAGAAGCCATTAATAGAGAAGCACAGAGATGAGAGGAAGGAAGTGAAAGAGAAGCTGGTTTTGGTGGGGCAAAAACCAAAGAGCTCGGTTCAGAGTAGCTCAAAGGCTGAAACTGAACTGAAAAATATGAGTTGTGTATCCTTTACTGCTGTTTTTTTGTTTGTTCATCTACATGTATTTCCCTGA

Coding sequence (CDS)

ATGGAGTCTTCCCAAAATGTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACCATGTATATTGGATCTCCTGTAGATGATTCCAGTGATGGTGATGAAGATAACGATGTAGAATATGGAAAAAATAAAGGTTTTCATGCAAATCACCAAGATGATAGTGATGACTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGCCATCAACCAGATCACCCTTTTGGAGGACATGGGAGCATGAAACACCAGAAGCCATTAATAGAGAAGCACAGAGATGAGAGGAAGGAAGTGAAAGAGAAGCTGGTTTTGGTGGGGCAAAAACCAAAGAGCTCGGTTCAGAGTAGCTCAAAGGCTGAAACTGAACTGAAAAATATGAGTTGTGTATCCTTTACTGCTGTTTTTTTGTTTGTTCATCTACATGTATTTCCCTGA

Protein sequence

MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNKGFHANHQDDSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLIEKHRDERKEVKEKLVLVGQKPKSSVQSSSKAETELKNMSCVSFTAVFLFVHLHVFP
BLAST of Cp4.1LG04g14400 vs. TrEMBL
Match: A0A0A0LUQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014530 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.9e-22
Identity = 79/142 (55.63%), Postives = 92/142 (64.79%), Query Frame = 1

Query: 1   MESSQNVGVSEECHSSESGWTMYIGSPV-DDSSDGDEDNDVEYGKNKGFH---ANHQDDS 60
           ME SQ  GVSEECHSSESGWTMYIGSP  DDSSD   D+D E  ++KG++    NH D  
Sbjct: 1   MEPSQIFGVSEECHSSESGWTMYIGSPANDDSSDAASDDDDEDEEHKGYYYAANNHNDSD 60

Query: 61  DDSMASDASSGPSHQP--DHPFGG----HGSMKH--------QKPLIEKHRDERKEVKEK 120
           DDSMASDASSGP HQ    +PF G    +G M          +KPL+EK + +R E KE 
Sbjct: 61  DDSMASDASSGPCHQKGNHNPFKGMKNPNGEMNFCLETTRTVRKPLMEKKKKQRAERKE- 120

Query: 121 LVLVGQKPKSSVQSSSKAETEL 125
            V VGQKPK+SVQSSSK    +
Sbjct: 121 -VQVGQKPKTSVQSSSKVRKSI 140

BLAST of Cp4.1LG04g14400 vs. TrEMBL
Match: A0A061FYA0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014436 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.9e-13
Identity = 67/158 (42.41%), Postives = 87/158 (55.06%), Query Frame = 1

Query: 1   MESSQNVGVSEECHSSESGWTMYIGSPV----DDSSDGDEDNDVEYGKNKGFHA-----N 60
           ME S+ +G +EECHSSESGWTMYIGSP+    DD  DG  D D  Y  N G HA     N
Sbjct: 1   MEPSKILGGTEECHSSESGWTMYIGSPIQGGDDDDDDGHSDADA-YAANYGGHADETEIN 60

Query: 61  HQDDSDDSMASDASSGPSHQPDHPFG----GHGSM---------------KHQKPLIEKH 120
           H+ DSDDSMASDASSGPSHQ  H +G    GHG+                K  K  +EK 
Sbjct: 61  HEADSDDSMASDASSGPSHQ-GHRYGNMEEGHGTSHLNDEVEGEGNYYLDKEAKKSLEKQ 120

Query: 121 ------RDERKEVKEKLVLVGQKPKSSVQSSSKAETEL 125
                 ++++++ KE++ L   K  ++ +S SK    +
Sbjct: 121 KLGMKKKEDKEDQKERMTLKA-KGAATPRSGSKVRKSI 155

BLAST of Cp4.1LG04g14400 vs. TrEMBL
Match: A0A0D2T3R8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G201100 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-11
Identity = 58/125 (46.40%), Postives = 74/125 (59.20%), Query Frame = 1

Query: 1   MESSQNVGVSEECHSSESGWTMYIGSPV---DDSSDGDE---DNDVEYGKNKGFHANHQD 60
           MESS+  G  EECHSSESGWTMYIGSP+   DDS DG     D++  YG +   HA+ Q 
Sbjct: 1   MESSKIYGGIEECHSSESGWTMYIGSPIHGGDDSGDGHSEKADDEGVYGVDN--HADEQA 60

Query: 61  DSDDSMASDASSGPSHQPDHPFGGHGSMKHQKPLIEKHRDERKEVKEKLVLVGQKPKSSV 120
           DSDDSMASDASSGPSH+     G  G+        E+  +E ++  E+    G+K + S 
Sbjct: 61  DSDDSMASDASSGPSHK-----GHRGTTTLYFKHDEEEEEEEEDEDERNFFSGKKDRKSK 118

BLAST of Cp4.1LG04g14400 vs. TrEMBL
Match: A0A067JKM3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05808 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-11
Identity = 59/117 (50.43%), Postives = 66/117 (56.41%), Query Frame = 1

Query: 1   MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDE----DNDVE---YGKNKGFHANHQ 60
           M SSQ  G  EECHSSESGWTMY+GS V D  D D+    DND     YGKNK  +   +
Sbjct: 1   MGSSQFFGGKEECHSSESGWTMYLGSWVQDDGDDDDGDNNDNDHHGGNYGKNKNNYYQ-E 60

Query: 61  DDSDDSMASDASSGPSHQ---------PDHPFGGHGSMKHQKPLIEKHRDERKEVKE 102
           DDSDDSMASDASSGPSHQ          DH    H   K+ K   +  R  +K  KE
Sbjct: 61  DDSDDSMASDASSGPSHQVKNEDEDDDDDHNGKYHSERKNNKEKQKTERIRKKNGKE 116

BLAST of Cp4.1LG04g14400 vs. TrEMBL
Match: B9IFF9_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0015s06520g PE=4 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-11
Identity = 61/135 (45.19%), Postives = 78/135 (57.78%), Query Frame = 1

Query: 1   MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNK----GFHANHQDDS 60
           MESSQ + V+EECHSSESGWTMY+GSP  D   GD+D   + G +       + ++ DDS
Sbjct: 72  MESSQ-IFVAEECHSSESGWTMYLGSPTQDDDGGDDDEHSDDGDSSDGGGSDNKSYNDDS 131

Query: 61  DDSMASDASSGPSH--------QPDHPFGGH--GSMKHQKPLIEKHRDE-RKEVKEKLVL 120
           DDSMASDASSGPSH        + D   G +    MK  KP   K  +  RKE KE +  
Sbjct: 132 DDSMASDASSGPSHHGIAHLKQEEDKHVGKYQMDQMKANKPKENKKAESGRKEEKEAMAF 191

BLAST of Cp4.1LG04g14400 vs. TAIR10
Match: AT5G38790.1 (AT5G38790.1 unknown protein)

HSP 1 Score: 51.6 bits (122), Expect = 4.7e-07
Identity = 36/72 (50.00%), Postives = 40/72 (55.56%), Query Frame = 1

Query: 11 EECHSSESGWTMYIGSP--VDDSSDGDED------NDVEYGKNKGFHANHQDDSDDSMAS 70
          EEC SSESGWT Y+ SP  VD+    DED      N   Y            DSDDSMAS
Sbjct: 4  EECSSSESGWTTYLSSPIKVDEDEVVDEDYYYEGYNIYNYSSKVEHEEERNKDSDDSMAS 63

Query: 71 DASSGPSHQPDH 75
          DASSGP++Q  H
Sbjct: 64 DASSGPNYQRFH 75

BLAST of Cp4.1LG04g14400 vs. NCBI nr
Match: gi|659106443|ref|XP_008453328.1| (PREDICTED: uncharacterized protein LOC103494080 [Cucumis melo])

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21
Identity = 79/142 (55.63%), Postives = 93/142 (65.49%), Query Frame = 1

Query: 1   MESSQNVGVSEECHSSESGWTMYIGSPV-DDSSDGDEDNDVEYGKNKGFH---ANHQDDS 60
           ME SQ  GVSEECHSSESGWTMYIGSP  DDSSD   D+D +  ++KG++    NH D  
Sbjct: 1   MEPSQIFGVSEECHSSESGWTMYIGSPANDDSSDAASDDDDKDEEHKGYYYAANNHNDSD 60

Query: 61  DDSMASDASSGPSHQP--DHPFGG----HGSMKH--------QKPLIEKHRDERKEVKEK 120
           DDSMASDASSGPSHQ    +PF G    +G M          +KPL+EK + +R E KE 
Sbjct: 61  DDSMASDASSGPSHQKGNHNPFKGMKNPNGEMNFCLETTRTVRKPLMEKKKKQRAERKE- 120

Query: 121 LVLVGQKPKSSVQSSSKAETEL 125
            V VGQKPK+SVQSSSK    +
Sbjct: 121 -VKVGQKPKTSVQSSSKVRKNI 140

BLAST of Cp4.1LG04g14400 vs. NCBI nr
Match: gi|778656162|ref|XP_011648559.1| (PREDICTED: uncharacterized protein LOC105434528 [Cucumis sativus])

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-21
Identity = 79/142 (55.63%), Postives = 92/142 (64.79%), Query Frame = 1

Query: 1   MESSQNVGVSEECHSSESGWTMYIGSPV-DDSSDGDEDNDVEYGKNKGFH---ANHQDDS 60
           ME SQ  GVSEECHSSESGWTMYIGSP  DDSSD   D+D E  ++KG++    NH D  
Sbjct: 1   MEPSQIFGVSEECHSSESGWTMYIGSPANDDSSDAASDDDDEDEEHKGYYYAANNHNDSD 60

Query: 61  DDSMASDASSGPSHQP--DHPFGG----HGSMKH--------QKPLIEKHRDERKEVKEK 120
           DDSMASDASSGP HQ    +PF G    +G M          +KPL+EK + +R E KE 
Sbjct: 61  DDSMASDASSGPCHQKGNHNPFKGMKNPNGEMNFCLETTRTVRKPLMEKKKKQRAERKE- 120

Query: 121 LVLVGQKPKSSVQSSSKAETEL 125
            V VGQKPK+SVQSSSK    +
Sbjct: 121 -VQVGQKPKTSVQSSSKVRKSI 140

BLAST of Cp4.1LG04g14400 vs. NCBI nr
Match: gi|590669210|ref|XP_007037710.1| (Uncharacterized protein TCM_014436 [Theobroma cacao])

HSP 1 Score: 82.4 bits (202), Expect = 7.1e-13
Identity = 67/158 (42.41%), Postives = 87/158 (55.06%), Query Frame = 1

Query: 1   MESSQNVGVSEECHSSESGWTMYIGSPV----DDSSDGDEDNDVEYGKNKGFHA-----N 60
           ME S+ +G +EECHSSESGWTMYIGSP+    DD  DG  D D  Y  N G HA     N
Sbjct: 1   MEPSKILGGTEECHSSESGWTMYIGSPIQGGDDDDDDGHSDADA-YAANYGGHADETEIN 60

Query: 61  HQDDSDDSMASDASSGPSHQPDHPFG----GHGSM---------------KHQKPLIEKH 120
           H+ DSDDSMASDASSGPSHQ  H +G    GHG+                K  K  +EK 
Sbjct: 61  HEADSDDSMASDASSGPSHQ-GHRYGNMEEGHGTSHLNDEVEGEGNYYLDKEAKKSLEKQ 120

Query: 121 ------RDERKEVKEKLVLVGQKPKSSVQSSSKAETEL 125
                 ++++++ KE++ L   K  ++ +S SK    +
Sbjct: 121 KLGMKKKEDKEDQKERMTLKA-KGAATPRSGSKVRKSI 155

BLAST of Cp4.1LG04g14400 vs. NCBI nr
Match: gi|1009179984|ref|XP_015871382.1| (PREDICTED: trigger factor-like [Ziziphus jujuba])

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-11
Identity = 64/144 (44.44%), Postives = 83/144 (57.64%), Query Frame = 1

Query: 1   MESSQNVGVSEECHSSESGWTMYIGSPV-DDSSDGDE--DNDVEYGKNKG--------FH 60
           M+SSQ+ G +EEC SSESGWTMYIGSP+ DD   G +  DND + G N G         H
Sbjct: 2   MDSSQSFGGAEECQSSESGWTMYIGSPIHDDDQYGSDYADND-DGGTNDGDDDDNSDADH 61

Query: 61  ANHQDDSDDSMASDASSGPSHQ---------PDHPFGGHGSM-----KHQKPLIEKHRDE 120
            N ++DSDDSMASDASSGPSH           D      G       K +KP +EK +  
Sbjct: 62  HNDENDSDDSMASDASSGPSHLGRTNGNAVFKDEEEENDGKYCIIDEKAKKPSMEKMQRS 121

BLAST of Cp4.1LG04g14400 vs. NCBI nr
Match: gi|743933977|ref|XP_011011306.1| (PREDICTED: late secretory pathway protein AVL9-like [Populus euphratica])

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-11
Identity = 62/134 (46.27%), Postives = 78/134 (58.21%), Query Frame = 1

Query: 1   MESSQNVGVSEECHSSESGWTMYIGSPVDDSSDGDEDNDVEYGKNK----GFHANHQDDS 60
           MESSQ + V+EECHSSESGWTMY+GSP  D   GD+D   E G +       + ++ DDS
Sbjct: 1   MESSQ-IFVAEECHSSESGWTMYLGSPTQDDDGGDDDEHSEDGDSSDGDGSDNKSYNDDS 60

Query: 61  DDSMASDASSGPSH--------QPDHPFGGHG-SMKHQKPLIEKHRDE-RKEVKEKLVLV 120
           DDSMASDASSGPSH        + D   G +   MK  KP   K  +  RKE KE +  +
Sbjct: 61  DDSMASDASSGPSHHGIAHLKQEEDKHVGKYQMEMKANKPKENKKAESGRKEEKEAMAFM 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LUQ4_CUCSA9.9e-2255.63Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014530 PE=4 SV=1[more]
A0A061FYA0_THECC4.9e-1342.41Uncharacterized protein OS=Theobroma cacao GN=TCM_014436 PE=4 SV=1[more]
A0A0D2T3R8_GOSRA1.2e-1146.40Uncharacterized protein OS=Gossypium raimondii GN=B456_008G201100 PE=4 SV=1[more]
A0A067JKM3_JATCU1.2e-1150.43Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05808 PE=4 SV=1[more]
B9IFF9_POPTR2.1e-1145.19Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0015s06520g P... [more]
Match NameE-valueIdentityDescription
AT5G38790.14.7e-0750.00 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659106443|ref|XP_008453328.1|1.1e-2155.63PREDICTED: uncharacterized protein LOC103494080 [Cucumis melo][more]
gi|778656162|ref|XP_011648559.1|1.4e-2155.63PREDICTED: uncharacterized protein LOC105434528 [Cucumis sativus][more]
gi|590669210|ref|XP_007037710.1|7.1e-1342.41Uncharacterized protein TCM_014436 [Theobroma cacao][more]
gi|1009179984|ref|XP_015871382.1|1.0e-1144.44PREDICTED: trigger factor-like [Ziziphus jujuba][more]
gi|743933977|ref|XP_011011306.1|1.3e-1146.27PREDICTED: late secretory pathway protein AVL9-like [Populus euphratica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g14400.1Cp4.1LG04g14400.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33347FAMILY NOT NAMEDcoord: 2..71
score: 2.2
NoneNo IPR availablePANTHERPTHR33347:SF3SUBFAMILY NOT NAMEDcoord: 2..71
score: 2.2

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g14400Cucurbita pepo (Zucchini)cpecpeB053
Cp4.1LG04g14400Cucurbita pepo (Zucchini)cpecpeB054
Cp4.1LG04g14400Cucurbita pepo (Zucchini)cpecpeB364
Cp4.1LG04g14400Cucurbita pepo (Zucchini)cpecpeB399
Cp4.1LG04g14400Cucurbita pepo (Zucchini)cpecpeB442
Cp4.1LG04g14400Cucumber (Gy14) v1cgycpeB0265
Cp4.1LG04g14400Cucumber (Gy14) v1cgycpeB0564
Cp4.1LG04g14400Cucumber (Gy14) v1cgycpeB0561
Cp4.1LG04g14400Cucumber (Gy14) v1cgycpeB0761
Cp4.1LG04g14400Cucurbita maxima (Rimu)cmacpeB153
Cp4.1LG04g14400Cucurbita maxima (Rimu)cmacpeB246
Cp4.1LG04g14400Cucurbita maxima (Rimu)cmacpeB450
Cp4.1LG04g14400Cucurbita maxima (Rimu)cmacpeB452
Cp4.1LG04g14400Cucurbita moschata (Rifu)cmocpeB212
Cp4.1LG04g14400Cucurbita moschata (Rifu)cmocpeB411
Cp4.1LG04g14400Cucurbita moschata (Rifu)cmocpeB413
Cp4.1LG04g14400Wild cucumber (PI 183967)cpecpiB642
Cp4.1LG04g14400Wild cucumber (PI 183967)cpecpiB658
Cp4.1LG04g14400Wild cucumber (PI 183967)cpecpiB684
Cp4.1LG04g14400Cucumber (Chinese Long) v2cpecuB638
Cp4.1LG04g14400Cucumber (Chinese Long) v2cpecuB655
Cp4.1LG04g14400Cucumber (Chinese Long) v2cpecuB680
Cp4.1LG04g14400Bottle gourd (USVL1VR-Ls)cpelsiB542
Cp4.1LG04g14400Bottle gourd (USVL1VR-Ls)cpelsiB556
Cp4.1LG04g14400Watermelon (Charleston Gray)cpewcgB610
Cp4.1LG04g14400Watermelon (Charleston Gray)cpewcgB607
Cp4.1LG04g14400Watermelon (97103) v1cpewmB664
Cp4.1LG04g14400Melon (DHL92) v3.5.1cpemeB595
Cp4.1LG04g14400Melon (DHL92) v3.5.1cpemeB602
Cp4.1LG04g14400Melon (DHL92) v3.5.1cpemeB615
Cp4.1LG04g14400Cucumber (Gy14) v2cgybcpeB128
Cp4.1LG04g14400Cucumber (Gy14) v2cgybcpeB682
Cp4.1LG04g14400Melon (DHL92) v3.6.1cpemedB706
Cp4.1LG04g14400Melon (DHL92) v3.6.1cpemedB711
Cp4.1LG04g14400Melon (DHL92) v3.6.1cpemedB727
Cp4.1LG04g14400Silver-seed gourdcarcpeB0548
Cp4.1LG04g14400Silver-seed gourdcarcpeB0726
Cp4.1LG04g14400Cucumber (Chinese Long) v3cpecucB0816
Cp4.1LG04g14400Cucumber (Chinese Long) v3cpecucB0852
Cp4.1LG04g14400Wax gourdcpewgoB0867
Cp4.1LG04g14400Wax gourdcpewgoB0884