CSPI01G03150 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTTCACATTAGCTTCTAATGATATTATTATACCTTTTGCAATAACAAGTTCTTTCTTTCTTTCTTTCTTTTTTTCTAGCTGTCTTCTGCTCACTGAAACGTCAGAGAATTTATTTGCCTTTTGATTTTCAGGTGGTGCAGTGAGGGTTTTTCTTTCAAAACTTGAAAAAAAAAATAAAAGAAAAAGAAAATTGGGCTCTTTTTTTGTAGCTTTCAGGTGTCTAAATTCAGCTTCCCCATTCATTAACCTTCCTCAATTCTGTTATTCATTCTTCTTCTTCTTCTCCTCCTTCTCCTTCTTTACCTTAAACTCCTCAAATTGCTTGTTGATTGTTATGGAACCTTCACAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCTAATGATGATTCAAGCGATGCAGCTTCTGATGATGATGATGAAGATGAAGAACATAAAGGTTATTATTATGCAGCAAATAACCATAATGATAGTGATGATGATTCCATGGCTTCTGATGCTTCTTCAGGTCCATGTCATCAAAAAGGTAATCATAATCCATTTAAAGGGATGAAAAATCCCAATGGTGAAATGAATTTTTGCTTAGAAACAACCAGAACTGTTAGGAAGCCATTAATGGAAAAGAAGAAGAAGCAAAGAGCTGAGAGAAAAGAAGTCCAAGTAGGACAAAAGCCTAAAACTTCAGTTCAAAGCAGTTCTAAGGTAAGAAAAAGTATCTTGATGAGTAAAAGAAACTAGCTAAGCTAGTTCCTCTTCTTTCTTTTATTTTTTTTGGCTATTTCATTTATGCTTTGTTGTAGGCTGAAAAAATGAACACATGGAAAAACATGAGCTGTTTCTTTTACAAGACAATATTTTGGTAG ATGGAACCTTCACAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCTAATGATGATTCAAGCGATGCAGCTTCTGATGATGATGATGAAGATGAAGAACATAAAGGTTATTATTATGCAGCAAATAACCATAATGATAGTGATGATGATTCCATGGCTTCTGATGCTTCTTCAGGTCCATGTCATCAAAAAGGTAATCATAATCCATTTAAAGGGATGAAAAATCCCAATGGTGAAATGAATTTTTGCTTAGAAACAACCAGAACTGTTAGGAAGCCATTAATGGAAAAGAAGAAGAAGCAAAGAGCTGAGAGAAAAGAAGTCCAAGTAGGACAAAAGCCTAAAACTTCAGTTCAAAGCAGTTCTAAGGCTGAAAAAATGAACACATGGAAAAACATGAGCTGTTTCTTTTACAAGACAATATTTTGGTAG ATGGAACCTTCACAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCTAATGATGATTCAAGCGATGCAGCTTCTGATGATGATGATGAAGATGAAGAACATAAAGGTTATTATTATGCAGCAAATAACCATAATGATAGTGATGATGATTCCATGGCTTCTGATGCTTCTTCAGGTCCATGTCATCAAAAAGGTAATCATAATCCATTTAAAGGGATGAAAAATCCCAATGGTGAAATGAATTTTTGCTTAGAAACAACCAGAACTGTTAGGAAGCCATTAATGGAAAAGAAGAAGAAGCAAAGAGCTGAGAGAAAAGAAGTCCAAGTAGGACAAAAGCCTAAAACTTCAGTTCAAAGCAGTTCTAAGGCTGAAAAAATGAACACATGGAAAAACATGAGCTGTTTCTTTTACAAGACAATATTTTGGTAG
BLAST of CSPI01G03150 vs. TrEMBL
Match: A0A0A0LUQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014530 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 2.0e-68 Identity = 136/138 (98.55%), Postives = 136/138 (98.55%), Query Frame = 1
BLAST of CSPI01G03150 vs. TrEMBL
Match: A0A061FYA0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014436 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 2.6e-12 Identity = 68/159 (42.77%), Postives = 84/159 (52.83%), Query Frame = 1
BLAST of CSPI01G03150 vs. TrEMBL
Match: A0A0D2MM36_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G104300 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 2.6e-12 Identity = 60/152 (39.47%), Postives = 84/152 (55.26%), Query Frame = 1
BLAST of CSPI01G03150 vs. TrEMBL
Match: G7JT57_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_4g112870 PE=4 SV=2) HSP 1 Score: 74.7 bits (182), Expect = 1.1e-10 Identity = 60/149 (40.27%), Postives = 78/149 (52.35%), Query Frame = 1
BLAST of CSPI01G03150 vs. TrEMBL
Match: A0A067JKM3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05808 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.9e-10 Identity = 60/151 (39.74%), Postives = 79/151 (52.32%), Query Frame = 1
BLAST of CSPI01G03150 vs. TAIR10
Match: AT5G08150.1 (AT5G08150.1 suppressor of phytochrome b 5) HSP 1 Score: 57.4 bits (137), Expect = 9.2e-09 Identity = 45/110 (40.91%), Postives = 53/110 (48.18%), Query Frame = 1
BLAST of CSPI01G03150 vs. NCBI nr
Match: gi|778656162|ref|XP_011648559.1| (PREDICTED: uncharacterized protein LOC105434528 [Cucumis sativus]) HSP 1 Score: 266.5 bits (680), Expect = 2.8e-68 Identity = 136/138 (98.55%), Postives = 136/138 (98.55%), Query Frame = 1
BLAST of CSPI01G03150 vs. NCBI nr
Match: gi|659106443|ref|XP_008453328.1| (PREDICTED: uncharacterized protein LOC103494080 [Cucumis melo]) HSP 1 Score: 259.6 bits (662), Expect = 3.5e-66 Identity = 133/138 (96.38%), Postives = 135/138 (97.83%), Query Frame = 1
BLAST of CSPI01G03150 vs. NCBI nr
Match: gi|1009179984|ref|XP_015871382.1| (PREDICTED: trigger factor-like [Ziziphus jujuba]) HSP 1 Score: 82.0 bits (201), Expect = 9.9e-13 Identity = 66/152 (43.42%), Postives = 86/152 (56.58%), Query Frame = 1
BLAST of CSPI01G03150 vs. NCBI nr
Match: gi|823145175|ref|XP_012472463.1| (PREDICTED: cation channel sperm-associated protein 2-like [Gossypium raimondii]) HSP 1 Score: 80.1 bits (196), Expect = 3.8e-12 Identity = 60/152 (39.47%), Postives = 84/152 (55.26%), Query Frame = 1
BLAST of CSPI01G03150 vs. NCBI nr
Match: gi|590669210|ref|XP_007037710.1| (Uncharacterized protein TCM_014436 [Theobroma cacao]) HSP 1 Score: 80.1 bits (196), Expect = 3.8e-12 Identity = 68/159 (42.77%), Postives = 84/159 (52.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |