Csa1G014530 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACCTTCACAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCTAATGATGATTCAAGCGATGCAGCTTCTGATGATGATGATGAAGATGAAGAACATAAAGGTTATTATTATGCAGCAAATAACCATAATGATAGTGATGATGATTCCATGGCTTCTGATGCTTCTTCAGGTCCATGTCATCAAAAAGGTAATCATAATCCATTTAAAGGGATGAAAAATCCCAATGGTGAAATGAATTTTTGCTTAGAAACAACCAGAACTGTTAGGAAGCCATTAATGGAAAAGAAGAAGAAGCAAAGAGCTGAGAGAAAAGAAGTCCAAGTAGGACAAAAGCCTAAAACTTCAGTTCAAAGCAGTTCTAAGGTAAGAAAAAGTATCTTGATGAGTAAAAGAAACTAG ATGGAACCTTCACAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCTAATGATGATTCAAGCGATGCAGCTTCTGATGATGATGATGAAGATGAAGAACATAAAGGTTATTATTATGCAGCAAATAACCATAATGATAGTGATGATGATTCCATGGCTTCTGATGCTTCTTCAGGTCCATGTCATCAAAAAGGTAATCATAATCCATTTAAAGGGATGAAAAATCCCAATGGTGAAATGAATTTTTGCTTAGAAACAACCAGAACTGTTAGGAAGCCATTAATGGAAAAGAAGAAGAAGCAAAGAGCTGAGAGAAAAGAAGTCCAAGTAGGACAAAAGCCTAAAACTTCAGTTCAAAGCAGTTCTAAGGTAAGAAAAAGTATCTTGATGAGTAAAAGAAACTAG ATGGAACCTTCACAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCTGCTAATGATGATTCAAGCGATGCAGCTTCTGATGATGATGATGAAGATGAAGAACATAAAGGTTATTATTATGCAGCAAATAACCATAATGATAGTGATGATGATTCCATGGCTTCTGATGCTTCTTCAGGTCCATGTCATCAAAAAGGTAATCATAATCCATTTAAAGGGATGAAAAATCCCAATGGTGAAATGAATTTTTGCTTAGAAACAACCAGAACTGTTAGGAAGCCATTAATGGAAAAGAAGAAGAAGCAAAGAGCTGAGAGAAAAGAAGTCCAAGTAGGACAAAAGCCTAAAACTTCAGTTCAAAGCAGTTCTAAGGTAAGAAAAAGTATCTTGATGAGTAAAAGAAACTAG MEPSQIFGVSEECHSSESGWTMYIGSPANDDSSDAASDDDDEDEEHKGYYYAANNHNDSDDDSMASDASSGPCHQKGNHNPFKGMKNPNGEMNFCLETTRTVRKPLMEKKKKQRAERKEVQVGQKPKTSVQSSSKVRKSILMSKRN*
BLAST of Csa1G014530 vs. TrEMBL
Match: A0A0A0LUQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014530 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 4.7e-80 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1
BLAST of Csa1G014530 vs. TrEMBL
Match: A0A061FYA0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014436 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 3.8e-21 Identity = 74/166 (44.58%), Postives = 91/166 (54.82%), Query Frame = 1
BLAST of Csa1G014530 vs. TrEMBL
Match: A0A0D2MM36_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G104300 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.2e-19 Identity = 62/155 (40.00%), Postives = 86/155 (55.48%), Query Frame = 1
BLAST of Csa1G014530 vs. TrEMBL
Match: B9IFF9_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0015s06520g PE=4 SV=2) HSP 1 Score: 102.4 bits (254), Expect = 4.7e-19 Identity = 60/145 (41.38%), Postives = 76/145 (52.41%), Query Frame = 1
BLAST of Csa1G014530 vs. TrEMBL
Match: G7JT57_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_4g112870 PE=4 SV=2) HSP 1 Score: 98.6 bits (244), Expect = 6.7e-18 Identity = 62/149 (41.61%), Postives = 80/149 (53.69%), Query Frame = 1
BLAST of Csa1G014530 vs. TAIR10
Match: AT5G08150.1 (AT5G08150.1 suppressor of phytochrome b 5) HSP 1 Score: 69.7 bits (169), Expect = 1.7e-12 Identity = 45/110 (40.91%), Postives = 51/110 (46.36%), Query Frame = 1
BLAST of Csa1G014530 vs. TAIR10
Match: AT5G38790.1 (AT5G38790.1 unknown protein) HSP 1 Score: 63.2 bits (152), Expect = 1.6e-10 Identity = 44/125 (35.20%), Postives = 60/125 (48.00%), Query Frame = 1
BLAST of Csa1G014530 vs. TAIR10
Match: AT1G26210.1 (AT1G26210.1 SOB five-like 1) HSP 1 Score: 60.5 bits (145), Expect = 1.0e-09 Identity = 49/139 (35.25%), Postives = 60/139 (43.17%), Query Frame = 1
BLAST of Csa1G014530 vs. TAIR10
Match: AT3G30580.1 (AT3G30580.1 unknown protein) HSP 1 Score: 60.1 bits (144), Expect = 1.3e-09 Identity = 41/118 (34.75%), Postives = 55/118 (46.61%), Query Frame = 1
BLAST of Csa1G014530 vs. TAIR10
Match: AT1G68870.1 (AT1G68870.1 SOB five-like 2) HSP 1 Score: 59.3 bits (142), Expect = 2.3e-09 Identity = 46/160 (28.75%), Postives = 64/160 (40.00%), Query Frame = 1
BLAST of Csa1G014530 vs. NCBI nr
Match: gi|778656162|ref|XP_011648559.1| (PREDICTED: uncharacterized protein LOC105434528 [Cucumis sativus]) HSP 1 Score: 305.1 bits (780), Expect = 6.8e-80 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1
BLAST of Csa1G014530 vs. NCBI nr
Match: gi|659106443|ref|XP_008453328.1| (PREDICTED: uncharacterized protein LOC103494080 [Cucumis melo]) HSP 1 Score: 297.0 bits (759), Expect = 1.9e-77 Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 1
BLAST of Csa1G014530 vs. NCBI nr
Match: gi|590669210|ref|XP_007037710.1| (Uncharacterized protein TCM_014436 [Theobroma cacao]) HSP 1 Score: 109.4 bits (272), Expect = 5.5e-21 Identity = 74/166 (44.58%), Postives = 91/166 (54.82%), Query Frame = 1
BLAST of Csa1G014530 vs. NCBI nr
Match: gi|823145175|ref|XP_012472463.1| (PREDICTED: cation channel sperm-associated protein 2-like [Gossypium raimondii]) HSP 1 Score: 104.4 bits (259), Expect = 1.8e-19 Identity = 62/155 (40.00%), Postives = 86/155 (55.48%), Query Frame = 1
BLAST of Csa1G014530 vs. NCBI nr
Match: gi|1009179984|ref|XP_015871382.1| (PREDICTED: trigger factor-like [Ziziphus jujuba]) HSP 1 Score: 103.6 bits (257), Expect = 3.0e-19 Identity = 70/156 (44.87%), Postives = 91/156 (58.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |