ClCG03G008730 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG03G008730
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	plastid movement impaired 2 LENGTH=225
Location	CG_Chr03 : 10598683 .. 10602671 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGTAAGAAACGGAAATCGAGAGAAAATCGGAGAAAATGGGGAATAGTATTGGAGGAAGGAAAAGAGTAAAGGTAATGAAAGTGGACGGAGAGATTCTGAAATTGAAATTGCCGATTCGAGTTTCGGAGGTTTTGAAGGATTATCCTGATCATGTTCTTATGGAATCTGAGGCCGTTAAGCATTACGGAGTTAAGGCCATGCCATTGGAGCCGCAGCAGGATTTGAACAGGAAGAAGATTTACTTTCTTTTACAGTTACCAAAAATCGCCGCCGATTATCAGCCGCCGCCCGAGAGGATTCCGAGAAGAGTTCGTTCCTCTGGGGTCAATATGTCCGCCAAGGACCGTCTCGACCTTCTCATGCTCTCGCGCCGGACTATGTCCGAAATTGCTATTACTAGACCGTCTTCAGCGGCGGCGGCTTCCTCTGCCCAACCGCGCTTCAATAGCGGCCCGATGCAGGTTAAGATGAGGATTCCGAGATCGCAGATCGCGAAATTGATGGAGGAGAGTCGGAATGAAGGAGATGTCGCCGAGAAAATTATTAATATGTATTTGAAGAACGAGGTCAATACTGACGGTGGTGGTACCGGTGCCGGTGCTGGTAACGTTGAAGCCGGCCGGCAGCCATGCCTTGTTAGTAGCGTTAGGGAAAATTCAAAGGTTCATCGCGAGGTACGTTTTCTCCTTCCAATTTTTCACTTTGATTTAACTTTGTTTAAATCCCATTTTAATCCTTTACATTTGAACTAGTCCCTAAATTTTATTTTATTTTATTTTATTTTGTTTCTAAAATTTAACAACATACTTATTTTTTATTTTTAGAGTGACTAAATTCAAGATTTATAAAAATGATAGAGTTTTGTTTAGAGGTATTTTAATTAAAGTTGTGGGTATTTTAGTTTCGGATAAGAAATTTTAAAATGTTATAATTTAAATCCATATAAGATTTAAAAAAAAAAAGAGTAATAGCTAACTAGAAAATCAACAACTCAACAAACTGTGCTTGGTCTCATTGGCTGGAGTCTTAACAACCGAAAAATTGAGGGAATAAAAAACGATTGATTAGTTTTGAAGGTAACAAATTTGAATAATTATTATTAATTTAAAGTACAGCAAATTTGAATTAGTACCTTTGAATTTTTCATCTCCGTTTGACTACCCAATCGGTAAACGACGGTGTATAGCTTTTACGATATTTAAATCTAAAGTCCCAAATTTAACGTTTGGTTTTAGAATATACTATTATTAATAAACATCTGATTCGGAATTGTTTTAAAATAAAAAATAAAAAATAATATAAAAAAAAAAGAAAAAAAGAAAGAAAAACAGAAGTTTAAATCTTAGTTTAATATAGAATCTTCGGTATCTATTCTATTTTCATTCGACCTCAAAAACTTTAGATAATCTATTTTTCTCATTTAAGTTTTAAATATCATAATTTAAAATAAACGTAAAATAAGTTAAACTGTAAACTCATGGAATGAGTGGGAGATATATTAGAGCACATTATTGTATGTAGACAATGACGTCAGTTTTAGATAAGCAATAATAAAACTGGGCTAGTTTGCCCTTTTGGACTTATCCATAATGGTATTTTGATGAGAAGTTCAATTTTATAGTACTCTTTGTCTATATATAATTTTGGAGGTAGAATATAATAACTTATCACATATAAAATTGAAAATTTAGATTTTAATTTAGAGATTGATTTGATAAATTTATGTATTTATTAAATATAAAATTGAAAGGTTGAATCAACTATTAAATATTTTTTAAAATTTAAACAAAATAATCATAAATCTAAAAGTTTAAATTTCATTTGATAAATATTTAATTTTTTAAAATTGTGCATGTTTTCTCACAAATTAAAAAGAAAGAAATCTTCTTTAGAATCTATTTTTTTTTTTTAGTTTGAGAACTATTTCAAATGATTATTGGATGTTGTGATTTAATCTTTTTAAATAGTTAATAAATAAATAGATAGTTTTTAAATGCTCTATTTTTCATAACATGTGAGGTAAGAGAGTAGAATCTTTAACTTTAAAGTTGATTGTTCAAGTTCTATGTTCATTTTGCGGTAAAAAAACGAGTTAGAAATAGATAGTGGAAGGTTGATAGAGAGGGGATAGTGATACAACTACAAAGTAATTATTAGGTGGAGATCCAAATTTGACTTTTTCCCTAACCAAATTAAAGAAAAATTCTTAATTAAATGATTATTAGGTCTAAAGTGAGTGAGTTAGGTTTTTGTCACATTATTCCAACAAATGCCTTGAATCTATTGTTCTTTTTCTTTGAAATGGAGACCACAAATATATCAACTTACAATAAAGAATATAAATAGATTAAATGTTAGTACTGAAGAAGAATTAATTACCTGATGCAAAATTCCAAATGTGTTTTGTAACCTTTTGAACCTAGTAAAAGAGTGCATGAATTGACTTTTTAGTGAAGACATATTTTATTTGATCAAACAACATGATAAGTTTAGCATCTTTGCTAGAGAAAGCAAAATTTTATCCATAAATCAACCAATAAAATTCTGATATTATCTTTAGTTCACAATACTTTATTTATGATTTGATTGATTGACACAATAATTGCACTATATAGCTGATGAGTGTGGTTTTTAGTTAATAGTTAGGAAAACAAATGTAGGCAAATAGACCACCCATCTATCTAAACTAATCAATGTGGATTAAATTAGGTCTCAAACCTTCACACATAAATATATTAGAAGGGGTTTCTTTTCCCAAAAGGATTGAAAAGTGGGAGTTGGTAATTGAAATGTGGATCAATAAATTCAATCTATTTTTAATGCATAACTAACAAACATAATCTGATTTCAATATTTTGTCAAAAGAATAAAACTTATACAAAGTAGTTGTTTGTTATTTGATGTTATAATAATTAAAATTAATGATTTATGAAGGTAGATGAAACTATTTATTTATTTATTAATTATTATTATTATTTTGGGAAAATTCAAACTAAAATCAACTTTTTTTCTGAAAAACAACTGAAGTTAGTAGTTAAAGGCCCACGGATTGAAATGGTAGGTTATCAACCACGCCGGCAACAAAATAGAATTTCTAATCAAATAAATTGAACATTTTATTTTTAACATAAACTAAGGTTCTCCCCTTTTTCCTTTTTCTTTTTTCTTTTATCATTATTGAATCATTGTGACCACTTGATGAGTCACTTTTATTTAAATTAATAATTAATAATTAATAATTAACAAACGAAGCTTCATTAGTCGCTTCCTTTTGTTTTATGCATCTGAAAAATGAGAACAAAATAATTAATTAGTAATCATGTGCTGATCATTATTAATATTTATACAAGTGTTAAACTATCAATTATATCGGCCTTCAACATTTTCTTTTTTCTTTTATTTTAAGTGTGGAAAGTTCGTGTCTTTTCCTTTGGAAAATAAAAATTCATTGGTATTACAAATCTGTAATTTGTGTACTTTTTAGAACATCTAAACATCTCTATAAAGACTATATATAATATTATCTTAAAATGTTGGCACACATAAAGATTTATATGTAATTAATGTTTGGAGCAGCTTTGGAAGTAGTAGCTAACTTTTTTGTGAATGTAATAAATTATACAGAAGCGAGTGAGTTTCTTACCAGTGGATAAAGGAGAAATTCATTTAGCCGTAGCAGACAATCAATAGCTGATAGAAGTTTTGAATTGATAAAGGAAGAAGAAGAAGCATCCATCTCTTTCTCCATGGTTTAATTTCCTAGCTAGTTTTTGGATATATATATTCTTCCATATATTATGAGGAAGTTGTTAAATTAGATCATAAATTTCATACAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGATCATGAGAGATTCAAAACCTAATTCATATGCTATGTCAGAGATGTTTTGCAAAAGTTTAAGATAGAATTTGGTTGAGAATTAATGATTTAGAATAGGGATGTTAATTACACTATACATTTGT

mRNA sequence

GGGTAAGAAACGGAAATCGAGAGAAAATCGGAGAAAATGGGGAATAGTATTGGAGGAAGGAAAAGAGTAAAGGTAATGAAAGTGGACGGAGAGATTCTGAAATTGAAATTGCCGATTCGAGTTTCGGAGGTTTTGAAGGATTATCCTGATCATGTTCTTATGGAATCTGAGGCCGTTAAGCATTACGGAGTTAAGGCCATGCCATTGGAGCCGCAGCAGGATTTGAACAGGAAGAAGATTTACTTTCTTTTACAGTTACCAAAAATCGCCGCCGATTATCAGCCGCCGCCCGAGAGGATTCCGAGAAGAGTTCGTTCCTCTGGGGTCAATATGTCCGCCAAGGACCGTCTCGACCTTCTCATGCTCTCGCGCCGGACTATGTCCGAAATTGCTATTACTAGACCGTCTTCAGCGGCGGCGGCTTCCTCTGCCCAACCGCGCTTCAATAGCGGCCCGATGCAGGTTAAGATGAGGATTCCGAGATCGCAGATCGCGAAATTGATGGAGGAGAGTCGGAATGAAGGAGATGTCGCCGAGAAAATTATTAATATGTATTTGAAGAACGAGGTCAATACTGACGGTGGTGGTACCGGTGCCGGTGCTGGTAACGTTGAAGCCGGCCGGCAGCCATGCCTTGTTAGTAGCGTTAGGGAAAATTCAAAGGTTCATCGCGAGAAGCGAGTGAGTTTCTTACCAGTGGATAAAGGAGAAATTCATTTAGCCGTAGCAGACAATCAATAGCTGATAGAAGTTTTGAATTGATAAAGGAAGAAGAAGAAGCATCCATCTCTTTCTCCATGGTTTAATTTCCTAGCTAGTTTTTGGATATATATATTCTTCCATATATTATGAGGAAGTTGTTAAATTAGATCATAAATTTCATACAAAAAAAAAAAAAAAAAAAAAAAAGAGAGAGATCATGAGAGATTCAAAACCTAATTCATATGCTATGTCAGAGATGTTTTGCAAAAGTTTAAGATAGAATTTGGTTGAGAATTAATGATTTAGAATAGGGATGTTAATTACACTATACATTTGT

Coding sequence (CDS)

ATGGGGAATAGTATTGGAGGAAGGAAAAGAGTAAAGGTAATGAAAGTGGACGGAGAGATTCTGAAATTGAAATTGCCGATTCGAGTTTCGGAGGTTTTGAAGGATTATCCTGATCATGTTCTTATGGAATCTGAGGCCGTTAAGCATTACGGAGTTAAGGCCATGCCATTGGAGCCGCAGCAGGATTTGAACAGGAAGAAGATTTACTTTCTTTTACAGTTACCAAAAATCGCCGCCGATTATCAGCCGCCGCCCGAGAGGATTCCGAGAAGAGTTCGTTCCTCTGGGGTCAATATGTCCGCCAAGGACCGTCTCGACCTTCTCATGCTCTCGCGCCGGACTATGTCCGAAATTGCTATTACTAGACCGTCTTCAGCGGCGGCGGCTTCCTCTGCCCAACCGCGCTTCAATAGCGGCCCGATGCAGGTTAAGATGAGGATTCCGAGATCGCAGATCGCGAAATTGATGGAGGAGAGTCGGAATGAAGGAGATGTCGCCGAGAAAATTATTAATATGTATTTGAAGAACGAGGTCAATACTGACGGTGGTGGTACCGGTGCCGGTGCTGGTAACGTTGAAGCCGGCCGGCAGCCATGCCTTGTTAGTAGCGTTAGGGAAAATTCAAAGGTTCATCGCGAGAAGCGAGTGAGTTTCTTACCAGTGGATAAAGGAGAAATTCATTTAGCCGTAGCAGACAATCAATAG

Protein sequence

MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAMPLEPQQDLNRKKIYFLLQLPKIAADYQPPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEIAITRPSSAAAASSAQPRFNSGPMQVKMRIPRSQIAKLMEESRNEGDVAEKIINMYLKNEVNTDGGGTGAGAGNVEAGRQPCLVSSVRENSKVHREKRVSFLPVDKGEIHLAVADNQ

Homology

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BLAST of ClCG03G008730 vs. Swiss-Prot
Match: Y1648_ARATH (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana GN=At1g66480 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.7e-40
Identity = 99/228 (43.42%), Postives = 136/228 (59.65%), Query Frame = 1


Query: 1   MGNSIG-GRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAMPLEP 60
           MGNSI   RKR KVMK+DGE  ++K P+   EV  DYP +VL++S+AVKH+GV++ PLEP
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 61  QQDLNRKKIYFLLQLPKIAADYQPPPE--------RIPRRVRSSGVNMSAKDRLDLLMLS 120
            Q L  KK YFL++LPK+      PPE        ++P R   SG+++ AK+RLD+LMLS
Sbjct: 61  NQTLKPKKTYFLVELPKL------PPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLS 120

Query: 121 RRTMSEIAITRPSSAAAASSAQPRFNSGPMQVKMRIPRSQIAKLMEESRNEGD-VAEKII 180
           RRT+S++ I R   +       P    G   V++R+PRSQI KLMEE+ N+   +AEKI+
Sbjct: 121 RRTVSDVTIGR---SDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKIL 180

Query: 181 NMYLKNEVNTDGGGTGAGAGNVEAGRQPCLVSSVRENSKVHREKRVSF 219
            +Y++       G  G G G V+  R+      +       REK+VSF
Sbjct: 181 GIYMER-----SGELGGGRGGVDGRRE------LGSGEIKAREKQVSF 208

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BLAST of ClCG03G008730 vs. TrEMBL
Match: A0A0A0KRN5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G418770 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 5.4e-94
Identity = 189/226 (83.63%), Postives = 203/226 (89.82%), Query Frame = 1


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAMPLEPQ 60
           MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKA PLEPQ
Sbjct: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNRKKIYFLLQLPKIAADYQPPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEIAI 120
           QDLNRKKIYFLLQLPKIAAD +PPP+RIPRRVRSSGV+MSAKDRLDLLMLSRRTMSEIAI
Sbjct: 61  QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120

Query: 121 TRPSSAAAA-SSAQPRFNSGPMQVKMRIPRSQIAKLMEESRNEGDVAEKIINMYLKNEVN 180
           TRPS+ +A  SSAQPRF+SGPMQVKM+IPRSQ+AKLMEES +EG++AEKII MYLKNEVN
Sbjct: 121 TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVN 180

Query: 181 TDGGGTGAGAGNVEAGR-----QPCLVSSVRENSKVHREKRVSFLP 221
           T GG     AG+V AG+     +P LVSSVRENSKVHRE R  FLP
Sbjct: 181 TGGG----SAGDVNAGQHPEHWKPSLVSSVRENSKVHREVRF-FLP 221

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BLAST of ClCG03G008730 vs. TrEMBL
Match: A0A061EH62_THECC (Plastid movement impaired 2 OS=Theobroma cacao GN=TCM_019256 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 7.8e-61
Identity = 128/229 (55.90%), Postives = 172/229 (75.11%), Query Frame = 1


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAMPLEPQ 60
           MGNS+GGRK+ KVMK+DGE  KLK P+R  +V+KDYP HVL++SEAVKH+G++A PLEPQ
Sbjct: 1   MGNSMGGRKKAKVMKIDGETFKLKTPVRAWDVVKDYPGHVLLDSEAVKHFGIRAKPLEPQ 60

Query: 61  QDLNRKKIYFLLQLPKIAADYQPPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEIAI 120
           QDL  KKIYFL++LPK       P E+ PRRVRS G++MSAKDRL+ LMLSRR++S++++
Sbjct: 61  QDLKPKKIYFLVELPKF------PEEKAPRRVRSGGIHMSAKDRLECLMLSRRSVSDLSM 120

Query: 121 TRPSSAAAASSAQPRFNSGPMQVKMRIPRSQIAKLMEESRNEGDVAEKIINMYLKNEVNT 180
            RPSS+  +       +SG M VKMR+P+SQ+AKL+EESR+  +VAEKI+++Y++N    
Sbjct: 121 VRPSSSLGSDGLGR--SSGGMTVKMRLPKSQMAKLVEESRDGVEVAEKILDLYVENA--- 180

Query: 181 DGGGTGAGAGNVEAGRQPCLVSSVRENSKVHREKRVSFLPVDKGEIHLA 230
            GGG      ++EA  +P L  S+ EN K  REKRVSF+P ++GEI LA
Sbjct: 181 -GGGDTDNQMHLEAPWKPGL-GSIGENFKAKREKRVSFIPQEEGEIRLA 216

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BLAST of ClCG03G008730 vs. TrEMBL
Match: A0A0D2QMN0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G086600 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 4.8e-58
Identity = 132/238 (55.46%), Postives = 169/238 (71.01%), Query Frame = 1


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPD-HVLMESEAVKHYGVKAMPLEP 60
           MGNSIGGR + KVMK+DGE +KLK PIRV +VLKDYP  HVL++S+ VKHYG++A PLEP
Sbjct: 1   MGNSIGGRNKAKVMKIDGETIKLKTPIRVWDVLKDYPTGHVLLDSQTVKHYGIRAKPLEP 60

Query: 61  QQDLNRKKIYFLLQLPKIAADYQPPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEIA 120
           Q+ L  KKIYFL++LPK+A D      + PRRVRS G++MSAKDRL+ LMLSRRT+S+++
Sbjct: 61  QESLKPKKIYFLVELPKLADD---EVHKAPRRVRSGGIHMSAKDRLECLMLSRRTVSDLS 120

Query: 121 ITRPSSAAAAS-----SAQPRFNSGPMQVKMRIPRSQIAKLMEESRNEGDVAEKIINMYL 180
           + RPSS +                G M VKMR+P+SQ+AKLMEES++  +VAEKI+++Y 
Sbjct: 121 MVRPSSTSMVPDGVRLGGGGTSGGGMMTVKMRLPKSQMAKLMEESKDGVEVAEKILDLYT 180

Query: 181 KNEVNTDGGGTGAGAGN---VEAGRQPCLVSSVRENSKVHREKRVSFLPVDKGEIHLA 230
            N     GG  G  AGN    EA  +P L  +V EN K  REKRVSF+P ++GEIHLA
Sbjct: 181 GN-----GGSGGDDAGNRIHREAPWKPGL-GTVGENFKPKREKRVSFIPQEEGEIHLA 229

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BLAST of ClCG03G008730 vs. TrEMBL
Match: A0A0D2PP13_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G086600 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.4e-56
Identity = 131/238 (55.04%), Postives = 168/238 (70.59%), Query Frame = 1


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPD-HVLMESEAVKHYGVKAMPLEP 60
           MGNSIGGR + KVMK+DGE +KLK PIRV +VLKDYP  HVL++S+ VKHYG++A PLEP
Sbjct: 1   MGNSIGGRNKAKVMKIDGETIKLKTPIRVWDVLKDYPTGHVLLDSQTVKHYGIRAKPLEP 60

Query: 61  QQDLNRKKIYFLLQLPKIAADYQPPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEIA 120
           Q+ L  KKIYFL++LPK+A D      + PRRVRS G++MSAKDRL+ LMLSRRT+S+++
Sbjct: 61  QESLKPKKIYFLVELPKLADD---EVHKAPRRVRSGGIHMSAKDRLECLMLSRRTVSDLS 120

Query: 121 ITRPSSAAAAS-----SAQPRFNSGPMQVKMRIPRSQIAKLMEESRNEGDVAEKIINMYL 180
           + RPSS +                G M VKMR+P+SQ+AKLMEES++  +VAEKI+++Y 
Sbjct: 121 MVRPSSTSMVPDGVRLGGGGTSGGGMMTVKMRLPKSQMAKLMEESKDGVEVAEKILDLYT 180

Query: 181 KNEVNTDGGGTGAGAGN---VEAGRQPCLVSSVRENSKVHREKRVSFLPVDKGEIHLA 230
            N     GG  G  AGN    EA  +P L  +V EN K  RE RVSF+P ++GEIHLA
Sbjct: 181 GN-----GGSGGDDAGNRIHREAPWKPGL-GTVGENFKPKRE-RVSFIPQEEGEIHLA 228

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BLAST of ClCG03G008730 vs. TrEMBL
Match: V4UVZ8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012690mg PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.0e-52
Identity = 118/232 (50.86%), Postives = 162/232 (69.83%), Query Frame = 1


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAMPLEPQ 60
           MGN+IGGR++ KVMK+DGE +KLK PI+ SEV+KDYP +VL++SEAVKH+G++A PLEP+
Sbjct: 1   MGNTIGGRRKAKVMKIDGETIKLKTPIQASEVVKDYPGYVLLDSEAVKHFGIRAKPLEPR 60

Query: 61  QDLNRKKIYFLLQLPKIAADYQPPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEIAI 120
           Q L  KK+YFL++LPK+     P  E+I RRVR SG+ MSAKDRL+ LMLSRR +S++  
Sbjct: 61  QQLKPKKVYFLVELPKL-----PDEEKITRRVR-SGIQMSAKDRLECLMLSRRAVSDLTA 120

Query: 121 TRPSSAAAASSAQPRFNSGPMQVKMRIPRSQIAKLMEESRNEGDVAEKIINMYLKNEVNT 180
               S +  S   P   +G M+VKMR+PR+Q+ KLMEES N+ +VAEKI+++Y++    +
Sbjct: 121 VNVRS-SHGSEVAPGPGTGQMRVKMRLPRAQVEKLMEESANDEEVAEKIVDLYVE---KS 180

Query: 181 DGGGTGAGAGNVEAGRQ-PCLVSSVRENSKVHREKRVSFLPVDKGEIHLAVA 232
            GGG    +G +    +       VR + K    KRVSF+P  +GEIHL VA
Sbjct: 181 GGGGGRCYSGELRPEEEWKAGQGGVRRDFKARENKRVSFVP-SEGEIHLNVA 221

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BLAST of ClCG03G008730 vs. TAIR10
Match: AT1G66480.1 (AT1G66480.1 plastid movement impaired 2)

HSP 1 Score: 167.5 bits (423), Expect = 9.5e-42
Identity = 99/228 (43.42%), Postives = 136/228 (59.65%), Query Frame = 1


Query: 1   MGNSIG-GRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAMPLEP 60
           MGNSI   RKR KVMK+DGE  ++K P+   EV  DYP +VL++S+AVKH+GV++ PLEP
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 61  QQDLNRKKIYFLLQLPKIAADYQPPPE--------RIPRRVRSSGVNMSAKDRLDLLMLS 120
            Q L  KK YFL++LPK+      PPE        ++P R   SG+++ AK+RLD+LMLS
Sbjct: 61  NQTLKPKKTYFLVELPKL------PPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLS 120

Query: 121 RRTMSEIAITRPSSAAAASSAQPRFNSGPMQVKMRIPRSQIAKLMEESRNEGD-VAEKII 180
           RRT+S++ I R   +       P    G   V++R+PRSQI KLMEE+ N+   +AEKI+
Sbjct: 121 RRTVSDVTIGR---SDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKIL 180

Query: 181 NMYLKNEVNTDGGGTGAGAGNVEAGRQPCLVSSVRENSKVHREKRVSF 219
            +Y++       G  G G G V+  R+      +       REK+VSF
Sbjct: 181 GIYMER-----SGELGGGRGGVDGRRE------LGSGEIKAREKQVSF 208

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BLAST of ClCG03G008730 vs. TAIR10
Match: AT2G01340.1 (AT2G01340.1 Encodes a protein whose expression is responsive to nematode infection.)

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-36
Identity = 76/177 (42.94%), Postives = 115/177 (64.97%), Query Frame = 1


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAMPLEPQ 60
           MGNS+GG+K  KVMK+DGE  KLK P+   EVLKD+P HVL++SE+VKHYG +A PLE +
Sbjct: 1   MGNSLGGKKTTKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAKPLEAK 60

Query: 61  QDLNRKKIYFLLQLPKIAADYQPPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEIAI 120
           Q L  K++YF++         +P  E  PRRVR SG+++SAK+RL+ LML+RR+ S+++I
Sbjct: 61  QRLEAKRLYFVV---------EPVKECPPRRVR-SGIHVSAKERLESLMLARRSSSDLSI 120

Query: 121 TRPSSAAAASSAQPRFNSGPMQVKMRIPRSQIAKLMEESRNEGDVAEKIINMYLKNE 178
            +P         +        +VK+RIP++++ KL++E   E +  +KI  +++  +
Sbjct: 121 LKPPGGWTTEEEE----GAVRRVKVRIPKAELEKLVKEGATEAEATQKIAALFMAKQ 163

[Close]

BLAST of ClCG03G008730 vs. TAIR10
Match: AT5G37840.1 (AT5G37840.1 BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1))

HSP 1 Score: 149.1 bits (375), Expect = 3.5e-36
Identity = 90/219 (41.10%), Postives = 126/219 (57.53%), Query Frame = 1


Query: 1   MGNSIGGRK-RVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAMPLEP 60
           MGN+I  R+ +VKVMK+DG+I +LK P+  S+  K+YP  VL++SE VK  GV+A PLEP
Sbjct: 1   MGNTIMVRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEP 60

Query: 61  QQDLNRKKIYFLLQLPKIAADYQPPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEIA 120
            Q L     YFL+ LP +    + P     RRV S  +++ AK+RL++LMLSRRT+S++ 
Sbjct: 61  NQILKPNHTYFLVDLPPVDKRNKLP----YRRVMSGNIHVGAKERLEMLMLSRRTVSDVG 120

Query: 121 ITRPSSAAAASSAQPRFNSGPMQVKMRIPRSQIAKLMEESRNEGDVAEKIINMYLKNEVN 180
             R                G  +V++R+PRSQI KLMEES +  +VA KII+ Y+++   
Sbjct: 121 AARSDVVGDGPEL------GHTRVRLRLPRSQITKLMEESHDASEVAAKIISAYMESSGG 180

Query: 181 TDGGGTGAGAGNVEAGRQPCLVSSVRENSKVHREKRVSF 219
             GG    G       RQ   ++ +  + K  REK VSF
Sbjct: 181 IQGGRDNDGL------RQRLGIAEINNHYKA-REKHVSF 202

[Close]

BLAST of ClCG03G008730 vs. TAIR10
Match: AT1G71015.1 (AT1G71015.1 unknown protein)

HSP 1 Score: 137.1 bits (344), Expect = 1.4e-32
Identity = 73/174 (41.95%), Postives = 109/174 (62.64%), Query Frame = 1


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAMPLEPQ 60
           MGNS+G +K   +M ++GE  KLK P+    V+KD+P HVL+ESEAVK  G++A PLEP 
Sbjct: 1   MGNSLGTKKTATIMNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAKPLEPH 60

Query: 61  QDLNRKKIYFLLQLPKIAADYQPPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEIAI 120
           Q+L  K+IYF+++LP+         ER PRRVR SG+ MSAK+RL+ L LSRR+ S++++
Sbjct: 61  QNLESKRIYFMVELPRTW------KERTPRRVR-SGIQMSAKERLENLKLSRRSSSDLSV 120

Query: 121 TRPSSAAAASSAQPRFNSGPMQVKMRIPRSQIAKLMEESRNEGDVAEKIINMYL 175
            +  +       +         VK+++P+ +I KL +ES +  D + KI  + L
Sbjct: 121 MKKKTEVNDEERE------VSSVKLKLPKWKIEKLRKESESGSDFSNKITQLCL 161

[Close]

BLAST of ClCG03G008730 vs. NCBI nr
Match: gi|449445092|ref|XP_004140307.1| (PREDICTED: uncharacterized protein At1g66480-like [Cucumis sativus])

HSP 1 Score: 389.0 bits (998), Expect = 5.7e-105
Identity = 205/240 (85.42%), Postives = 220/240 (91.67%), Query Frame = 1


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAMPLEPQ 60
           MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKA PLEPQ
Sbjct: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNRKKIYFLLQLPKIAADYQPPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEIAI 120
           QDLNRKKIYFLLQLPKIAAD +PPP+RIPRRVRSSGV+MSAKDRLDLLMLSRRTMSEIAI
Sbjct: 61  QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120

Query: 121 TRPSSAAAA-SSAQPRFNSGPMQVKMRIPRSQIAKLMEESRNEGDVAEKIINMYLKNEVN 180
           TRPS+ +A  SSAQPRF+SGPMQVKM+IPRSQ+AKLMEES +EG++AEKII MYLKNEVN
Sbjct: 121 TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVN 180

Query: 181 TDGGGTGAGAGNVEAGR-----QPCLVSSVRENSKVHREKRVSFLPVDKGEIHLAVADNQ 235
           T GG     AG+V AG+     +P LVSSVRENSKVHREKRVSFLP+DKGEIHLAVADNQ
Sbjct: 181 TGGG----SAGDVNAGQHPEHWKPSLVSSVRENSKVHREKRVSFLPMDKGEIHLAVADNQ 236

[Close]

BLAST of ClCG03G008730 vs. NCBI nr
Match: gi|700195865|gb|KGN51042.1| (hypothetical protein Csa_5G418770 [Cucumis sativus])

HSP 1 Score: 352.1 bits (902), Expect = 7.7e-94
Identity = 189/226 (83.63%), Postives = 203/226 (89.82%), Query Frame = 1


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAMPLEPQ 60
           MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKA PLEPQ
Sbjct: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNRKKIYFLLQLPKIAADYQPPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEIAI 120
           QDLNRKKIYFLLQLPKIAAD +PPP+RIPRRVRSSGV+MSAKDRLDLLMLSRRTMSEIAI
Sbjct: 61  QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120

Query: 121 TRPSSAAAA-SSAQPRFNSGPMQVKMRIPRSQIAKLMEESRNEGDVAEKIINMYLKNEVN 180
           TRPS+ +A  SSAQPRF+SGPMQVKM+IPRSQ+AKLMEES +EG++AEKII MYLKNEVN
Sbjct: 121 TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVN 180

Query: 181 TDGGGTGAGAGNVEAGR-----QPCLVSSVRENSKVHREKRVSFLP 221
           T GG     AG+V AG+     +P LVSSVRENSKVHRE R  FLP
Sbjct: 181 TGGG----SAGDVNAGQHPEHWKPSLVSSVRENSKVHREVRF-FLP 221

[Close]

BLAST of ClCG03G008730 vs. NCBI nr
Match: gi|590652162|ref|XP_007033077.1| (Plastid movement impaired 2 [Theobroma cacao])

HSP 1 Score: 241.9 bits (616), Expect = 1.1e-60
Identity = 128/229 (55.90%), Postives = 172/229 (75.11%), Query Frame = 1


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAMPLEPQ 60
           MGNS+GGRK+ KVMK+DGE  KLK P+R  +V+KDYP HVL++SEAVKH+G++A PLEPQ
Sbjct: 1   MGNSMGGRKKAKVMKIDGETFKLKTPVRAWDVVKDYPGHVLLDSEAVKHFGIRAKPLEPQ 60

Query: 61  QDLNRKKIYFLLQLPKIAADYQPPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEIAI 120
           QDL  KKIYFL++LPK       P E+ PRRVRS G++MSAKDRL+ LMLSRR++S++++
Sbjct: 61  QDLKPKKIYFLVELPKF------PEEKAPRRVRSGGIHMSAKDRLECLMLSRRSVSDLSM 120

Query: 121 TRPSSAAAASSAQPRFNSGPMQVKMRIPRSQIAKLMEESRNEGDVAEKIINMYLKNEVNT 180
            RPSS+  +       +SG M VKMR+P+SQ+AKL+EESR+  +VAEKI+++Y++N    
Sbjct: 121 VRPSSSLGSDGLGR--SSGGMTVKMRLPKSQMAKLVEESRDGVEVAEKILDLYVENA--- 180

Query: 181 DGGGTGAGAGNVEAGRQPCLVSSVRENSKVHREKRVSFLPVDKGEIHLA 230
            GGG      ++EA  +P L  S+ EN K  REKRVSF+P ++GEI LA
Sbjct: 181 -GGGDTDNQMHLEAPWKPGL-GSIGENFKAKREKRVSFIPQEEGEIRLA 216

[Close]

BLAST of ClCG03G008730 vs. NCBI nr
Match: gi|823122597|ref|XP_012471773.1| (PREDICTED: uncharacterized protein At1g66480 isoform X1 [Gossypium raimondii])

HSP 1 Score: 232.6 bits (592), Expect = 6.8e-58
Identity = 132/238 (55.46%), Postives = 169/238 (71.01%), Query Frame = 1


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPD-HVLMESEAVKHYGVKAMPLEP 60
           MGNSIGGR + KVMK+DGE +KLK PIRV +VLKDYP  HVL++S+ VKHYG++A PLEP
Sbjct: 1   MGNSIGGRNKAKVMKIDGETIKLKTPIRVWDVLKDYPTGHVLLDSQTVKHYGIRAKPLEP 60

Query: 61  QQDLNRKKIYFLLQLPKIAADYQPPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEIA 120
           Q+ L  KKIYFL++LPK+A D      + PRRVRS G++MSAKDRL+ LMLSRRT+S+++
Sbjct: 61  QESLKPKKIYFLVELPKLADD---EVHKAPRRVRSGGIHMSAKDRLECLMLSRRTVSDLS 120

Query: 121 ITRPSSAAAAS-----SAQPRFNSGPMQVKMRIPRSQIAKLMEESRNEGDVAEKIINMYL 180
           + RPSS +                G M VKMR+P+SQ+AKLMEES++  +VAEKI+++Y 
Sbjct: 121 MVRPSSTSMVPDGVRLGGGGTSGGGMMTVKMRLPKSQMAKLMEESKDGVEVAEKILDLYT 180

Query: 181 KNEVNTDGGGTGAGAGN---VEAGRQPCLVSSVRENSKVHREKRVSFLPVDKGEIHLA 230
            N     GG  G  AGN    EA  +P L  +V EN K  REKRVSF+P ++GEIHLA
Sbjct: 181 GN-----GGSGGDDAGNRIHREAPWKPGL-GTVGENFKPKREKRVSFIPQEEGEIHLA 229

[Close]

BLAST of ClCG03G008730 vs. NCBI nr
Match: gi|823122599|ref|XP_012471780.1| (PREDICTED: uncharacterized protein At1g66480 isoform X2 [Gossypium raimondii])

HSP 1 Score: 226.1 bits (575), Expect = 6.4e-56
Identity = 131/238 (55.04%), Postives = 168/238 (70.59%), Query Frame = 1


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPD-HVLMESEAVKHYGVKAMPLEP 60
           MGNSIGGR + KVMK+DGE +KLK PIRV +VLKDYP  HVL++S+ VKHYG++A PLEP
Sbjct: 1   MGNSIGGRNKAKVMKIDGETIKLKTPIRVWDVLKDYPTGHVLLDSQTVKHYGIRAKPLEP 60

Query: 61  QQDLNRKKIYFLLQLPKIAADYQPPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEIA 120
           Q+ L  KKIYFL++LPK+A D      + PRRVRS G++MSAKDRL+ LMLSRRT+S+++
Sbjct: 61  QESLKPKKIYFLVELPKLADD---EVHKAPRRVRSGGIHMSAKDRLECLMLSRRTVSDLS 120

Query: 121 ITRPSSAAAAS-----SAQPRFNSGPMQVKMRIPRSQIAKLMEESRNEGDVAEKIINMYL 180
           + RPSS +                G M VKMR+P+SQ+AKLMEES++  +VAEKI+++Y 
Sbjct: 121 MVRPSSTSMVPDGVRLGGGGTSGGGMMTVKMRLPKSQMAKLMEESKDGVEVAEKILDLYT 180

Query: 181 KNEVNTDGGGTGAGAGN---VEAGRQPCLVSSVRENSKVHREKRVSFLPVDKGEIHLA 230
            N     GG  G  AGN    EA  +P L  +V EN K  RE RVSF+P ++GEIHLA
Sbjct: 181 GN-----GGSGGDDAGNRIHREAPWKPGL-GTVGENFKPKRE-RVSFIPQEEGEIHLA 228

The following BLAST results are available for this feature:

BLAST of ClCG03G008730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1648_ARATH	1.7e-40	43.42	Uncharacterized protein At1g66480 OS=Arabidopsis thaliana GN=At1g66480 PE=2 SV=1	[more]

BLAST of ClCG03G008730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRN5_CUCSA	5.4e-94	83.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G418770 PE=4 SV=1	[more]
A0A061EH62_THECC	7.8e-61	55.90	Plastid movement impaired 2 OS=Theobroma cacao GN=TCM_019256 PE=4 SV=1	[more]
A0A0D2QMN0_GOSRA	4.8e-58	55.46	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G086600 PE=4 SV=1	[more]
A0A0D2PP13_GOSRA	4.4e-56	55.04	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G086600 PE=4 SV=1	[more]
V4UVZ8_9ROSI	1.0e-52	50.86	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012690mg PE=4 SV=1	[more]

BLAST of ClCG03G008730 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G66480.1	9.5e-42	43.42	plastid movement impaired 2	[more]
AT2G01340.1	1.6e-36	42.94	Encodes a protein whose expression is responsive to nematode infecti...	[more]
AT5G37840.1	3.5e-36	41.10	BEST Arabidopsis thaliana protein match is: plastid movement impaire...	[more]
AT1G71015.1	1.4e-32	41.95	unknown protein	[more]

BLAST of ClCG03G008730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445092\|ref\|XP_004140307.1\|	5.7e-105	85.42	PREDICTED: uncharacterized protein At1g66480-like [Cucumis sativus]	[more]
gi\|700195865\|gb\|KGN51042.1\|	7.7e-94	83.63	hypothetical protein Csa_5G418770 [Cucumis sativus]	[more]
gi\|590652162\|ref\|XP_007033077.1\|	1.1e-60	55.90	Plastid movement impaired 2 [Theobroma cacao]	[more]
gi\|823122597\|ref\|XP_012471773.1\|	6.8e-58	55.46	PREDICTED: uncharacterized protein At1g66480 isoform X1 [Gossypium raimondii]	[more]
gi\|823122599\|ref\|XP_012471780.1\|	6.4e-56	55.04	PREDICTED: uncharacterized protein At1g66480 isoform X2 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG03G008730.1	ClCG03G008730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..166 score: 4.0
None	No IPR available	PANTHER	PTHR33148	FAMILY NOT NAMED	coord: 2..222 score: 1.8
None	No IPR available	PANTHER	PTHR33148:SF6	SUBFAMILY NOT NAMED	coord: 2..222 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG03G008730	Csa5G418770	Cucumber (Chinese Long) v2	cuwcgB383
ClCG03G008730	Cla019767	Watermelon (97103) v1	wcgwmB223
ClCG03G008730	Cla97C03G059950	Watermelon (97103) v2	wcgwmbB186
ClCG03G008730	Bhi12G001074	Wax gourd	wcgwgoB326
ClCG03G008730	CSPI05G14920	Wild cucumber (PI 183967)	cpiwcgB401
ClCG03G008730	Cucsa.034830	Cucumber (Gy14) v1	cgywcgB009
ClCG03G008730	CmaCh04G022990	Cucurbita maxima (Rimu)	cmawcgB645
ClCG03G008730	CmoCh04G024030	Cucurbita moschata (Rifu)	cmowcgB647
ClCG03G008730	Lsi09G009350	Bottle gourd (USVL1VR-Ls)	lsiwcgB014
ClCG03G008730	Cp4.1LG01g20030	Cucurbita pepo (Zucchini)	cpewcgB379
ClCG03G008730	CsGy5G014780	Cucumber (Gy14) v2	cgybwcgB349
ClCG03G008730	Carg18264	Silver-seed gourd	carwcgB0512
ClCG03G008730	CsaV3_5G024000	Cucumber (Chinese Long) v3	cucwcgB405

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG03G008730	Silver-seed gourd	carwcgB0802
ClCG03G008730	Cucurbita maxima (Rimu)	cmawcgB261
ClCG03G008730	Cucurbita moschata (Rifu)	cmowcgB250
ClCG03G008730	Melon (DHL92) v3.5.1	mewcgB023
ClCG03G008730	Cucurbita pepo (Zucchini)	cpewcgB170
ClCG03G008730	Melon (DHL92) v3.6.1	medwcgB021