CsaV3_5G024000 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G024000
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Plastid movement impaired 2
Location	chr5 : 18624358 .. 18631488 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGCCCCTTCTTCAGGAACAAAATTGAAAAAATAATAATAATCCATTATAAATAAATAAACAATAAAAGGCAATATATAAAAACAGAGACACAGGGGAGGGAAAAATTAGAAATTATTGGGCTAAAAGGGAAAGAAACGAAAATTTAGAGAGAGAGCGGAAAAAAAATGGGGAATAGTATCGGGGGGAGAAAGAGAGTAAAGGTAATGAAAGTGGACGGAGAGATTCTGAAATTGAAATTACCCATTCGAGTTTCTGAAGTTTTGAAGGATTATCCCGATCATGTTCTTATGGAATCGGAAGCCGTTAAGCATTACGGCGTTAAGGCCAAGCCATTGGAGCCGCAACAGGATTTAAACAGGAAGAAGATTTATTTTCTATTACAGTTGCCCAAAATCGCCGCTGATAATCGTCCCCCGCCCGATCGGATTCCCAGAAGAGTCCGTTCCTCTGGCGTCCATATGTCCGCCAAGGACCGTCTCGACCTTCTCATGCTCTCCCGCCGGACTATGTCCGAGATTGCTATTACTAGGCCGTCTACCACCTCCGCGACGGACTCCTCTGCTCAGCCGCGCTTCCATAGCGGCCCGATGCAGGTTAAGATGAAGATTCCGAGATCGCAGGTCGCGAAATTGATGGAGGAGAGTGCGAGTGAAGGAGAAATCGCTGAGAAGATTATTAAAATGTATTTGAAGAACGAGGTCAATACTGGCGGCGGTAGTGCCGGTGATGTCAACGCCGGCCAACACCCGGAGCATTGGAAACCGAGCCTTGTTAGTAGCGTTCGGGAAAATTCAAAGGTTCATCGCGAGGTACGTTTCTTTCTTCCAAATTTTCGCTTCATTCATTTTACTTTTCTCAAATTACCATATTTACTAACTAATTTCAACAAAATTTGATCTAAGTGAACTAAATTTAAGATTTATGAAATATGTGATTGTTATTTTCATTAAAGTTATGGGTACGAACATTTAAAAATTTTATAATCTAGGATTAAAGGAAACAAAAAAAAAGAAAAAAGAATGATAGCTTAACAAGAAAACGAACAACTCAACAAACTGTGCGTGGGCTAATTGTTGGAATCTTAACAACCGAAAGTTATATTAAAATGAAAATTAGATGAATTAAAAATGATTGATTTGTTTGGAAGGTAATAAATTTGACAAAAAAAAAAAAAAGTTGAATTCCTAACCTTTCATTTTCTTTTTCATCTTCGTTTGACTCCTGAAAGGGTAAAGGACGGTGTATACCTTTTACGATTTTCAAATCTAAATTCTCAAATTTAAGTTTGGTTTTAGAATATATTTGTTTTTTGGTTTTAGAATATATTTGTTTTGTTCTTCAATCACATTATTTGTATTCGTTCTTGTTACTGGTTTATTTTTCAATACTTGATTTGTGTAAATATATATCTTTTATATTTTCTTTTAATATGACTAATATTTGAAAATAATTTCTAACCTATAGAAAAAACAAGGTAGCGTATTAATAAGAATGATGAATGAACAATCTCGTTCCTCATTTTCTCTATTATAATAATAATAACAACAATAAGCTTATAATCCCTTAAAACAATAACAATTAAGAGTTGAATTATTATCGTATACTGGACTTTAACTTTAAGATATTAATAAATATCTAATCTTAAAGTGAGGACTTGTTTTAGAAAATAAAAAATAAAAAAGAAAGTCTAAATCTTACTCTAATCTAGAATCTTTTTCATGTTTATTTTCATTTGACCTCAAAATTATTTTGATATTCTATTTTCTTATTGAAGATTTAAATAACATAATTTAAAATGTAAAAGATTTTAAAGTCTAAGATATAATAAACAAATTTGGAACCTAATTAAATTGTTTGAACCAATGGAATGGGAGATATGTTAGCACATAATAATTGGAGATAAATAATGACGTCACTTTTAGATAAGCATTAATAATAAAATTGGACCTTCTTGGACAATTTTGCCCTTTGGACTTATCAATAATAGTGATGGACGAGGAGTTCAAATTTTACAATTCTCTTGGCAAACATATATAATATAAATTACTAAATAGCACAAGTTCATCAACATACCAAATATCGTCACATGTTTTTTGCATAACACGTTGATAAGTAGCACCAACATTCTTCAAGTTGAAGGACATCACCTTGTAACAGTATATTCCCTTTGTAGTCTTAAAAATTGTCATTTCTTCATATGAAAAGGTCATTCGTATTTGGTTATATCCAGATGACTCATCCATAAAGGACAATGACTCGTGTCCGATGGTTGCATCAACCATGATTTCTGTGGTGAACAAAGAGAAGTCATCTTTAGGGCATACATTATTTAAGTCACAAAAGTCTACACAAATGCGAAGTTGTCTGTTCTTTTTTTTCTAACACGGATAATGTTTGTTATCCATGTTGAATACTTGACCTCGTGAATGAATCATGCTTCAACTAACTTGTTGACTTCAGCCTCAATTTGGAGAATAAGCTTTGGTCAAAAATGTCGTTGAGATCTATTTTCAAACGTATCTAGAAACATACAAGGATCTGTTATGAAGTTTGGATCCCAACAACAAATCCTCATATGTGAAGCCTATAGACATACAATAAGAAGCATTTTCGTGGGTCGCAAAGATTTTATAAGCACTTGAACTTGAAGCTCCTGAATTTAACAATGCATCAATAAAGATGCTCTTGGTTTCTTAAGGAAGTGATAACAGATCATCCACATTAAACATCAACAAGTCTTTTGACACTTCCTCCTCCTCTGGTGATCTTGGAGGGATGCTTTCTTCCTTCGCTGCATTGATTGCATGACACCTAACGAATTTTGGGACTTCATCTTGATAATCATAGAGAAAGTTTGTTGGAAAGAAGTCTGCCAAGGTAGGGGAATCCTTGTCTTCCTCTTGCACGAGCATAGGCTTCCAAGTCTTCTTTTTCTTCTTCTTATTCTTCTGGGCCCTATTCCCTCTTCTATAATTTCAATAGGAGGGAGACTCCTTTTGGGCCAAAGTTTGTTACCTTTTCTTTCGACGAGTCACAACTATCCATCCTTCATTGTCTTCTTCGATCGATCTTTCTTTTCCTTGAGGATATCTTTTAGTGCGACTTCCTGATGGAACTGCACAACTATAAACTTAAAGATCCCAAACTGGACCAAATTTTCCTTTTGCTAGAAAATCGATGTTGATAAAGGAGCATTTGACATTATTGCCACTACAACGTGATTTTCTTGAGCTACTTCTTCCAAGTCTAGCTCGATCTTTTTCTCATGAGCCAACCTTAGAATTAGCTTTTTCAGCACAAAATATTTTTCAACTCGATGACTAATTACTTGATGATAGTTGTAATAGTTGAGATCATCTATCTTTCCTGCTCTTAGGTCGTTTAGATTTTGGCAAGTAGTGATCAGTTGCTTCTCCAGTAGTTGCTTTAGCATGTCTGCAATATCTGAATTAGGAAATGAGTAATTTTTTTTCCTATTTTTCCTTCAAAGTTAAGCGACGTCTCTCGCCTCCATCATCTTTCTTTTCAACTCTCACTTCCTTTCTTTTGGAGAACTTTAGCAGGATAGTGTTTACGATCATAGATTTCTTTACGACACTCTTCATTATCTTTTTGACACCCTTCATCTCTTTCTTGTCCTTCTTTACTTCAGGAGCAAGAAATCCTTAGTTCCTTTGTTGGCGATGCTCAACTCCATATCATGAGCACGAGTTACAAACTCTTCAAATGTGCAGGAACTTTATTTCCGGTAGAATGTAGAGAAGTCTCGAGTGCATACCTTGGGTGCACATCTCTATGACAGAAAATTCAATGAGTCGATCCTTATAATCAAAAGTCATAGCTCACCATCAGTTGATGTAGTTGATGACCGACTCTTCTTTTCATTGTTTTGTGTTTGTAAGCTCTATCATGGTTACAGTGTGCTTGGTGCTATAGAAGCAGTTTAGGAACTCTTTTTGTAGTTGTTCTCAATGATCAGTCACTTTAGGCTCCAAGTCTGTGTACTACTTGATAGTATTCCCTTTCAAGTTTTGAACAAACTACCTAACCAGTTGGTCTCCTCTTGATCTTGCATTATTGCATGTTTCAACAAAATGGGCAATGATAGACTTTGATCCCGCTCCTGGATGATCCCCTTTGAATGATTGTAGGTGATAGGTCCTATTTAAGCGTTAGTTTGCAATAGAAGATTTAGATGCAACTTTCATTGGTGCCATCAGTTTGCTTAGAGATTTGGATGACAAGAGAGAGATGTGAGGTAGAGATGTCCCATTGAACGTGCCAATTTGTTCACACGAGGTTTCTGAAAAAACGTGCTTCGTGAAGTTGAACTTGTGTTGATGTTGGTTATACGTGATGTGATTTGTTATCTAGTATTTAATCATATGATTCTCTATTGGTTGAATACCTACGCTTGATTTGAGAAAAAGAGTGTGTGATGTTCTTGAAGTTGGAGTATTAAAAGAAAACTCATATCTTCAAAAGAACTTCAATATTCGAGGGTGGTCAGCTTTAGGAGCTAGAGAGTCTTCTAGTTCTTAGGAGAATTCTCTTTAGACATTATGGAGTAAAAATTTATGTCCTCCTTCAATGAAGAAAACTCTTATATTTATAGAATCCTATGATTGATTTTACGAGCTTGGGCTTTGTTGGTCCATGGATTGACCCATGGACTCAATCACGTGGATTTGAGCCATGTATAACATTTAGGCTAAATTAAGTTATTTGTAGGTTCAATTGAACTTTATCCCAAATAAATAAAATTTAATGGAATTAAAATAATTAACTTGATTTAATTGTCGCATCATAGCCAATTTATGCGAAGAAAAAGGAAAAGATAATGAGAAGTAGATAGAAAAATAGAAAAAGGAAAGGGGACAGTGATACAACTACAAAGTAATTATTAGGTGGAGGACCCAAATTTGACTTTTGTCAGAACAAATGGAGAAAAATATTAATTGAATGATTATTAGGTCTAAAGTGAGTGAGATTAGGTTTTTGTTACATTATTCTAACAAATCCCTTGAATCCTTTTTTTTTTTTTTTCTTTTTAAATTTTTCTCTCAAATAAAGACCTAGCAATATCAACTTACAATAAAGTATTTCAAGAGAATTAATAAATGTTAATGAAGAATTAGCTGATGGAAAATTCCAAATGTCTTTTGCAACCTTTTGAACTTCTAGTAAAGGAAAAGAGTCCATGAATTGACTTCTTAGTGAACATATACTTTCTTTCATCAAACCAACTTCATAAGTTTAGCATCGTTTGTTAAGAGACAGCAAAATATTATCCATAAATCAACCAATCAGTTCTTTTTTACATTATCTTTACCTCAAAATACTTTATCTATGATTTGATTGATTGACAATATTGCAATATCTATACTTGTTGAGGGTGGTTTTAGTTAATAGTTAGGAAATAAATGTAACACCATCCATCTGTCTAATAAATGTGGATTCAATTAGGTCTAAAACCCTTCATATATATTATTATTATTATTATTATTATTATTAGAAGGTTTAATTTTTTTCCAAAACGATTGAAAAGTTGGGAGTTGGTAGGTGAAATGTGGATCAATAAATTCAATGTGTTTTTTTAATATATAACTAACAAACATACTCTGATTTAATTTCAATATTTTATGAAAAGAATACAACTAATACGAAGCAGTTATTTGTTGTTTGATGTTATAATTATTAAATTAAGACTTTATAAAGGCAGAGTAGATGAATCTTTTTTCTTTGTTTTTTGAGAGGAAATTTAAATTAAAATCAATTTTATTCTTAAATACAATCGAAATGAGTAGTTAAAAGTCCATGAGAATTGAAATTAAAATGGTAGGTTATCGACTACGCCGTCAAGAAAGTAGAAACTTTCTCTCTATAACCCAGTTTTCAATCAAATAAATTGAACTCTTATGTTTAATATAAACTATAAGGTTCTACCTTTTTCTTTTTCTTTTTTTCATTGAAGCTTCATTAGTAGCTTCCTTTTCTTATGTTTTTGTCTCTTTTCTTTTTAAAAAGCTTCCTTTTTTGTTTATGCATATGAAGAATGAGAACAAATAATTAATTAGTAATCACGTGTAGCTCATTATGAATATTTATACAAGTGTTCAACAACTATCAATCATATTTGTTTTTTTTTTTTAATTAAGTGTGAAACTTTGAATGTTTTTTTATAGAAATTAAAAATTTTAAGTTTAGTTTTCAATTTATCCAGTTATATTTTTGTGTATTATTAGGTCTTAGAATGTCATAATTATATTCTTGAATTTTGATTTTAGTTTTCATTTATTTTTTAGCTTCACTATCTTGCAATTCATACTACCATCAAATGTAATTATAAATCACCTTAGAAGCAAACAAATTAATTCAACGATGTAGAGGTTGTAAAACTTTTAAGTTGATCTAAGAGAAGAATTCTCTATATGCATGGATACATGTATTGGAAGGTAGTAACTAATTAACTTTTGTTTGTGAATGTAATAAATTTTATACAGAAACGAGTGAGTTTCTTACCAATGGATAAAGGAGAAATTCATTTAGCTGTAGCAGACAATCAACAGTAGACACAAGTTTTGAATTGGGAAGGGAGAGGAAGAAGGTGAAGGAAACAAGATGTTGTTGAATATAATTTGTTTTTGAGAGCATATCCATCCATGTTGACCTCTTTTTCTCAATGGCTTGATTTCATAGCTTTTAAATATATAAATTCTTCCCATATATTATGAGGAGAAGTTGTTAAATTAGATCATAACTTTCATACAAAAGGTAGAGATCATGAGAGATATATTCAAAGCCCTAATGCAAATGCTGGATGTAGCAGATAGATGTTAAGGTTTTGGGTAAGAATTAGTGATTTAGAATATAGAGATGTTAATTACATTATATATAGATTTGTACATAAAATGAATATATATATTTTGTATGTTTATGATCAGAAGAAAGGATATGTTATATGTTTTTGTGTATGGAAATGCAATTTCTAAACTCTGATTATACTTTTCATTTCAATTATTATCAAGAAAACTATTTGTCCTCAACTAGCTAACGTAAACATATATAGTCTAACAAATTAACACTATAAATCTCTCAGTACTTCTTTTTATATAGTTGAACTTAAAC

mRNA sequence

ATGGGGAATAGTATCGGGGGGAGAAAGAGAGTAAAGGTAATGAAAGTGGACGGAGAGATTCTGAAATTGAAATTACCCATTCGAGTTTCTGAAGTTTTGAAGGATTATCCCGATCATGTTCTTATGGAATCGGAAGCCGTTAAGCATTACGGCGTTAAGGCCAAGCCATTGGAGCCGCAACAGGATTTAAACAGGAAGAAGATTTATTTTCTATTACAGTTGCCCAAAATCGCCGCTGATAATCGTCCCCCGCCCGATCGGATTCCCAGAAGAGTCCGTTCCTCTGGCGTCCATATGTCCGCCAAGGACCGTCTCGACCTTCTCATGCTCTCCCGCCGGACTATGTCCGAGATTGCTATTACTAGGCCGTCTACCACCTCCGCGACGGACTCCTCTGCTCAGCCGCGCTTCCATAGCGGCCCGATGCAGGTTAAGATGAAGATTCCGAGATCGCAGGTCGCGAAATTGATGGAGGAGAGTGCGAGTGAAGGAGAAATCGCTGAGAAGATTATTAAAATGTATTTGAAGAACGAGGTCAATACTGGCGGCGGTAGTGCCGGTGATGTCAACGCCGGCCAACACCCGGAGCATTGGAAACCGAGCCTTGTTAGTAGCGTTCGGGAAAATTCAAAGGTTCATCGCGAGAAACGAGTGAGTTTCTTACCAATGGATAAAGGAGAAATTCATTTAGCTGTAGCAGACAATCAACAGTAG

Coding sequence (CDS)

ATGGGGAATAGTATCGGGGGGAGAAAGAGAGTAAAGGTAATGAAAGTGGACGGAGAGATTCTGAAATTGAAATTACCCATTCGAGTTTCTGAAGTTTTGAAGGATTATCCCGATCATGTTCTTATGGAATCGGAAGCCGTTAAGCATTACGGCGTTAAGGCCAAGCCATTGGAGCCGCAACAGGATTTAAACAGGAAGAAGATTTATTTTCTATTACAGTTGCCCAAAATCGCCGCTGATAATCGTCCCCCGCCCGATCGGATTCCCAGAAGAGTCCGTTCCTCTGGCGTCCATATGTCCGCCAAGGACCGTCTCGACCTTCTCATGCTCTCCCGCCGGACTATGTCCGAGATTGCTATTACTAGGCCGTCTACCACCTCCGCGACGGACTCCTCTGCTCAGCCGCGCTTCCATAGCGGCCCGATGCAGGTTAAGATGAAGATTCCGAGATCGCAGGTCGCGAAATTGATGGAGGAGAGTGCGAGTGAAGGAGAAATCGCTGAGAAGATTATTAAAATGTATTTGAAGAACGAGGTCAATACTGGCGGCGGTAGTGCCGGTGATGTCAACGCCGGCCAACACCCGGAGCATTGGAAACCGAGCCTTGTTAGTAGCGTTCGGGAAAATTCAAAGGTTCATCGCGAGAAACGAGTGAGTTTCTTACCAATGGATAAAGGAGAAATTCATTTAGCTGTAGCAGACAATCAACAGTAG

Protein sequence

MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQQDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAITRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVNTGGGSAGDVNAGQHPEHWKPSLVSSVRENSKVHREKRVSFLPMDKGEIHLAVADNQQ

Homology

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BLAST of CsaV3_5G024000 vs. NCBI nr
Match: XP_004140307.1 (PREDICTED: uncharacterized protein At1g66480-like [Cucumis sativus])

HSP 1 Score: 461.5 bits (1186), Expect = 1.8e-126
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ
Sbjct: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI
Sbjct: 61  QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120

Query: 121 TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVN 180
           TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVN
Sbjct: 121 TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVN 180

Query: 181 TGGGSAGDVNAGQHPEHWKPSLVSSVRENSKVHREKRVSFLPMDKGEIHLAVADNQQ 238
           TGGGSAGDVNAGQHPEHWKPSLVSSVRENSKVHREKRVSFLPMDKGEIHLAVADNQQ
Sbjct: 181 TGGGSAGDVNAGQHPEHWKPSLVSSVRENSKVHREKRVSFLPMDKGEIHLAVADNQQ 237

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BLAST of CsaV3_5G024000 vs. NCBI nr
Match: KGN51042.1 (hypothetical protein Csa_5G418770 [Cucumis sativus])

HSP 1 Score: 419.9 bits (1078), Expect = 6.0e-114
Identity = 219/222 (98.65%), Postives = 219/222 (98.65%), Query Frame = 0


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ
Sbjct: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI
Sbjct: 61  QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120

Query: 121 TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVN 180
           TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVN
Sbjct: 121 TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVN 180

Query: 181 TGGGSAGDVNAGQHPEHWKPSLVSSVRENSKVHREKRVSFLP 223
           TGGGSAGDVNAGQHPEHWKPSLVSSVRENSKVHRE R  FLP
Sbjct: 181 TGGGSAGDVNAGQHPEHWKPSLVSSVRENSKVHREVRF-FLP 221

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BLAST of CsaV3_5G024000 vs. NCBI nr
Match: XP_022990967.1 (uncharacterized protein At1g66480-like [Cucurbita maxima])

HSP 1 Score: 382.5 bits (981), Expect = 1.1e-102
Identity = 204/243 (83.95%), Postives = 217/243 (89.30%), Query Frame = 0


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGNSIGGR+RVKVMKVDGEILKLK PIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ
Sbjct: 1   MGNSIGGRRRVKVMKVDGEILKLKTPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           QDLN+KKIYFLLQLPKI   N  PP+RIPRRVRSSGV+MSAKDRLDLLMLSRRTMSE+AI
Sbjct: 61  QDLNKKKIYFLLQLPKIT--NPEPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEVAI 120

Query: 121 TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVN 180
           TRPS   AT SSA+PRFHSGPMQVKMKIPRSQVAKLMEES +EGEIAEKII +YLKNEVN
Sbjct: 121 TRPSPVLATASSAEPRFHSGPMQVKMKIPRSQVAKLMEESRNEGEIAEKIINLYLKNEVN 180

Query: 181 TGGG--------SAGDVNAGQHPEHWKPSLVSSVRENSKVHREKRVSFLPMDKGEIHLAV 236
           +GGG         +G V+AG+HPE WKPSLVSSVRENSKVHREKRVSFL MD+GEI LAV
Sbjct: 181 SGGGGGHGDAVAGSGGVDAGRHPEPWKPSLVSSVRENSKVHREKRVSFLAMDEGEIGLAV 240

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BLAST of CsaV3_5G024000 vs. NCBI nr
Match: XP_022956667.1 (uncharacterized protein At1g66480-like [Cucurbita moschata])

HSP 1 Score: 370.2 bits (949), Expect = 5.4e-99
Identity = 199/245 (81.22%), Postives = 213/245 (86.94%), Query Frame = 0


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGNSIGGR+RVKVMKVDGEILKLK PIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ
Sbjct: 1   MGNSIGGRRRVKVMKVDGEILKLKTPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           QDLN+KKIYFLLQLPKI+  N  PP+RIPRRVRSSGV+MSAKDRLDLLMLSRRTMSE+AI
Sbjct: 61  QDLNKKKIYFLLQLPKIS--NPEPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEVAI 120

Query: 121 TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVN 180
           TRPS   A  SSA+PRFHSGPMQVKMKIPRSQVAKLMEES +EGEIAEKII +YLKNEVN
Sbjct: 121 TRPSPVLAAASSAEPRFHSGPMQVKMKIPRSQVAKLMEESRNEGEIAEKIINLYLKNEVN 180

Query: 181 T----------GGGSAGDVNAGQHPEHWKPSLVSSVRENSKVHREKRVSFLPMDKGEIHL 236
           +              +G  +AG+HPE WKPSLVSSVRENSKVHREKRVSFL MD+GEI L
Sbjct: 181 SXXXXXXXXXXXXXGSGGFDAGRHPEPWKPSLVSSVRENSKVHREKRVSFLAMDEGEIGL 240

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BLAST of CsaV3_5G024000 vs. NCBI nr
Match: XP_023527466.1 (uncharacterized protein At1g66480-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369.8 bits (948), Expect = 7.1e-99
Identity = 199/245 (81.22%), Postives = 213/245 (86.94%), Query Frame = 0


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGNS+GGR+RVKVMKVDGEILKLK PIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ
Sbjct: 1   MGNSMGGRRRVKVMKVDGEILKLKTPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           QDLN+KKIYFLLQLPKI+  N  PP+RIPRRVRSSGV+MSAKDRLDLLMLSRRTMSE+AI
Sbjct: 61  QDLNKKKIYFLLQLPKIS--NPEPPERIPRRVRSSGVNMSAKDRLDLLMLSRRTMSEVAI 120

Query: 121 TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVN 180
           TRPS   A  SSA+PRFHSGPMQVKMKIPRSQVAKLMEES +EGEIAEKII +YLKNEVN
Sbjct: 121 TRPSPVLAAASSAEPRFHSGPMQVKMKIPRSQVAKLMEESRNEGEIAEKIINLYLKNEVN 180

Query: 181 T----------GGGSAGDVNAGQHPEHWKPSLVSSVRENSKVHREKRVSFLPMDKGEIHL 236
           +               G V+AG+HPE WKPSLVSSVRENSKVHREKRVSFL MD+GEI L
Sbjct: 181 SXXXXXXXXXXXXXXXGGVDAGRHPEPWKPSLVSSVRENSKVHREKRVSFLAMDEGEIGL 240

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BLAST of CsaV3_5G024000 vs. TAIR10
Match: AT1G66480.1 (plastid movement impaired 2)

HSP 1 Score: 159.8 bits (403), Expect = 2.0e-39
Identity = 89/191 (46.60%), Postives = 126/191 (65.97%), Query Frame = 0


Query: 1   MGNSIG-GRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEP 60
           MGNSI   RKR KVMK+DGE  ++K P+   EV  DYP +VL++S+AVKH+GV++KPLEP
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 61  QQDLNRKKIYFLLQLPKIAADNR--PPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSE 120
            Q L  KK YFL++LPK+  +       +++P R   SG+H+ AK+RLD+LMLSRRT+S+
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 121 IAITRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGE-IAEKIIKMYLK 180
           + I R    S       P    G   V++++PRSQ+ KLMEE+ ++   IAEKI+ +Y++
Sbjct: 121 VTIGR----SDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKILGIYME 180

Query: 181 NEVNTGGGSAG 188
                GGG  G
Sbjct: 181 RSGELGGGRGG 187

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BLAST of CsaV3_5G024000 vs. TAIR10
Match: AT2G01340.1 (Encodes a protein whose expression is responsive to nematode infection.)

HSP 1 Score: 147.1 bits (370), Expect = 1.4e-35
Identity = 78/178 (43.82%), Postives = 119/178 (66.85%), Query Frame = 0


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGNS+GG+K  KVMK+DGE  KLK P+   EVLKD+P HVL++SE+VKHYG +AKPLE +
Sbjct: 1   MGNSLGGKKTTKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAKPLEAK 60

Query: 61  QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           Q L  K++YF+++         P  +  PRRVR SG+H+SAK+RL+ LML+RR+ S+++I
Sbjct: 61  QRLEAKRLYFVVE---------PVKECPPRRVR-SGIHVSAKERLESLMLARRSSSDLSI 120

Query: 121 TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNE 179
            +P                   +VK++IP++++ KL++E A+E E  +KI  +++  +
Sbjct: 121 LKP-----XXXXXXXXXEGAVRRVKVRIPKAELEKLVKEGATEAEATQKIAALFMAKQ 163

[Close]

BLAST of CsaV3_5G024000 vs. TAIR10
Match: AT5G37840.1 (BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1))

HSP 1 Score: 147.1 bits (370), Expect = 1.4e-35
Identity = 93/230 (40.43%), Postives = 132/230 (57.39%), Query Frame = 0


Query: 1   MGNSIGGRK-RVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEP 60
           MGN+I  R+ +VKVMK+DG+I +LK P+  S+  K+YP  VL++SE VK  GV+AKPLEP
Sbjct: 1   MGNTIMVRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEP 60

Query: 61  QQDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIA 120
            Q L     YFL+ LP +   N+ P     RRV S  +H+ AK+RL++LMLSRRT+S++ 
Sbjct: 61  NQILKPNHTYFLVDLPPVDKRNKLP----YRRVMSGNIHVGAKERLEMLMLSRRTVSDVG 120

Query: 121 ITRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEV 180
             R                 G  +V++++PRSQ+ KLMEES    E+A KII  Y++   
Sbjct: 121 AARSDVVGDGP-------ELGHTRVRLRLPRSQITKLMEESHDASEVAAKIISAYME--- 180

Query: 181 NTGGGSAGDVNAGQHPEHWKPSLVSSVRENSKVHREKRVSFLPM-DKGEI 229
                S+G +  G+  +  +  L  +   N    REK VSF     +GEI
Sbjct: 181 -----SSGGIQGGRDNDGLRQRLGIAEINNHYKAREKHVSFAEKGGRGEI 211

[Close]

BLAST of CsaV3_5G024000 vs. TAIR10
Match: AT1G71015.1 (unknown protein)

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-31
Identity = 76/175 (43.43%), Postives = 113/175 (64.57%), Query Frame = 0


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGNS+G +K   +M ++GE  KLK P+    V+KD+P HVL+ESEAVK  G++AKPLEP 
Sbjct: 1   MGNSLGTKKTATIMNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAKPLEPH 60

Query: 61  QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           Q+L  K+IYF+++LP      R   +R PRRVR SG+ MSAK+RL+ L LSRR+ S++++
Sbjct: 61  QNLESKRIYFMVELP------RTWKERTPRRVR-SGIQMSAKERLENLKLSRRSSSDLSV 120

Query: 121 TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYL 176
            +   T   D   +         VK+K+P+ ++ KL +ES S  + + KI ++ L
Sbjct: 121 MK-KKTEVNDEERE------VSSVKLKLPKWKIEKLRKESESGSDFSNKITQLCL 161

[Close]

BLAST of CsaV3_5G024000 vs. Swiss-Prot
Match: sp|Q6NLC8|Y1648_ARATH (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.6e-38
Identity = 89/191 (46.60%), Postives = 126/191 (65.97%), Query Frame = 0


Query: 1   MGNSIG-GRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEP 60
           MGNSI   RKR KVMK+DGE  ++K P+   EV  DYP +VL++S+AVKH+GV++KPLEP
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 61  QQDLNRKKIYFLLQLPKIAADNR--PPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSE 120
            Q L  KK YFL++LPK+  +       +++P R   SG+H+ AK+RLD+LMLSRRT+S+
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 121 IAITRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGE-IAEKIIKMYLK 180
           + I R    S       P    G   V++++PRSQ+ KLMEE+ ++   IAEKI+ +Y++
Sbjct: 121 VTIGR----SDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKILGIYME 180

Query: 181 NEVNTGGGSAG 188
                GGG  G
Sbjct: 181 RSGELGGGRGG 187

[Close]

BLAST of CsaV3_5G024000 vs. TrEMBL
Match: tr|A0A0A0KRN5|A0A0A0KRN5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G418770 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 3.9e-114
Identity = 219/222 (98.65%), Postives = 219/222 (98.65%), Query Frame = 0


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ
Sbjct: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60

Query: 61  QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI
Sbjct: 61  QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120

Query: 121 TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVN 180
           TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVN
Sbjct: 121 TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVN 180

Query: 181 TGGGSAGDVNAGQHPEHWKPSLVSSVRENSKVHREKRVSFLP 223
           TGGGSAGDVNAGQHPEHWKPSLVSSVRENSKVHRE R  FLP
Sbjct: 181 TGGGSAGDVNAGQHPEHWKPSLVSSVRENSKVHREVRF-FLP 221

[Close]

BLAST of CsaV3_5G024000 vs. TrEMBL
Match: tr|A0A061EH62|A0A061EH62_THECC (Plastid movement impaired 2 OS=Theobroma cacao OX=3641 GN=TCM_019256 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 9.5e-60
Identity = 130/232 (56.03%), Postives = 172/232 (74.14%), Query Frame = 0


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYPDHVLMESEAVKHYGVKAKPLEPQ 60
           MGNS+GGRK+ KVMK+DGE  KLK P+R  +V+KDYP HVL++SEAVKH+G++AKPLEPQ
Sbjct: 1   MGNSMGGRKKAKVMKIDGETFKLKTPVRAWDVVKDYPGHVLLDSEAVKHFGIRAKPLEPQ 60

Query: 61  QDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIAI 120
           QDL  KKIYFL++LPK       P ++ PRRVRS G+HMSAKDRL+ LMLSRR++S++++
Sbjct: 61  QDLKPKKIYFLVELPKF------PEEKAPRRVRSGGIHMSAKDRLECLMLSRRSVSDLSM 120

Query: 121 TRPSTTSATDSSAQPRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYLKNEVN 180
            RPS++  +D   +    SG M VKM++P+SQ+AKL+EES    E+AEKI+ +Y++N   
Sbjct: 121 VRPSSSLGSDGLGR---SSGGMTVKMRLPKSQMAKLVEESRDGVEVAEKILDLYVEN--- 180

Query: 181 TGGGSAGDVNAGQHPE-HWKPSLVSSVRENSKVHREKRVSFLPMDKGEIHLA 232
             GG  GD +   H E  WKP L  S+ EN K  REKRVSF+P ++GEI LA
Sbjct: 181 -AGG--GDTDNQMHLEAPWKPGL-GSIGENFKAKREKRVSFIPQEEGEIRLA 216

[Close]

BLAST of CsaV3_5G024000 vs. TrEMBL
Match: tr|A0A0D2QMN0|A0A0D2QMN0_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G086600 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 6.2e-59
Identity = 135/239 (56.49%), Postives = 171/239 (71.55%), Query Frame = 0


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYP-DHVLMESEAVKHYGVKAKPLEP 60
           MGNSIGGR + KVMK+DGE +KLK PIRV +VLKDYP  HVL++S+ VKHYG++AKPLEP
Sbjct: 1   MGNSIGGRNKAKVMKIDGETIKLKTPIRVWDVLKDYPTGHVLLDSQTVKHYGIRAKPLEP 60

Query: 61  QQDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIA 120
           Q+ L  KKIYFL++LPK+A D      + PRRVRS G+HMSAKDRL+ LMLSRRT+S+++
Sbjct: 61  QESLKPKKIYFLVELPKLADDE---VHKAPRRVRSGGIHMSAKDRLECLMLSRRTVSDLS 120

Query: 121 ITRPSTTSATDSSAQ----PRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMYL 180
           + RPS+TS      +         G M VKM++P+SQ+AKLMEES    E+AEKI+ +Y 
Sbjct: 121 MVRPSSTSMVPDGVRLGGGGTSGGGMMTVKMRLPKSQMAKLMEESKDGVEVAEKILDLY- 180

Query: 181 KNEVNTGGGSAGDVNAGQ--HPE-HWKPSLVSSVRENSKVHREKRVSFLPMDKGEIHLA 232
                TG G +G  +AG   H E  WKP L  +V EN K  REKRVSF+P ++GEIHLA
Sbjct: 181 -----TGNGGSGGDDAGNRIHREAPWKPGL-GTVGENFKPKREKRVSFIPQEEGEIHLA 229

[Close]

BLAST of CsaV3_5G024000 vs. TrEMBL
Match: tr|A0A1U8P3D5|A0A1U8P3D5_GOSHI (uncharacterized protein At1g66480-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107953916 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.5e-57
Identity = 132/239 (55.23%), Postives = 166/239 (69.46%), Query Frame = 0


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYP-DHVLMESEAVKHYGVKAKPLEP 60
           MGNSIGGR + KVMK+DGE +KLK PIRV +VLKDYP  HVL++S+ VKHYG++AKPLEP
Sbjct: 1   MGNSIGGRNKAKVMKIDGETIKLKTPIRVWDVLKDYPTGHVLLDSQTVKHYGIRAKPLEP 60

Query: 61  QQDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIA 120
           Q+ L  KKIYFL++LPK+A D      + PRRVRS G+HMSAKDRL+ LMLSRRT+S+++
Sbjct: 61  QESLKPKKIYFLVELPKLADDE---VHKAPRRVRSGGIHMSAKDRLECLMLSRRTVSDLS 120

Query: 121 ITRPSTTSATDSSAQ-----PRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKMY 180
           + RPS+TS      +              VKM++P+SQ+AKLMEES    E+AEKI+ +Y
Sbjct: 121 MVRPSSTSMVPDGVRLGXXXXXXXXXXXTVKMRLPKSQMAKLMEESKDGVEVAEKILDLY 180

Query: 181 LKNEVNTGGGSAGDV--NAGQHPEHWKPSLVSSVRENSKVHREKRVSFLPMDKGEIHLA 232
             N     GGS GD   N       WKP L  +V EN K  REKRVSF+P ++GEIHLA
Sbjct: 181 TGN-----GGSGGDEAGNRIHREAPWKPGL-GTVGENFKPKREKRVSFIPQEEGEIHLA 230

[Close]

BLAST of CsaV3_5G024000 vs. TrEMBL
Match: tr|A0A1U8MDK5|A0A1U8MDK5_GOSHI (uncharacterized protein At1g66480-like OS=Gossypium hirsutum OX=3635 GN=LOC107936612 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.4e-57
Identity = 133/241 (55.19%), Postives = 170/241 (70.54%), Query Frame = 0


Query: 1   MGNSIGGRKRVKVMKVDGEILKLKLPIRVSEVLKDYP-DHVLMESEAVKHYGVKAKPLEP 60
           MGNSIGGR + KVMK+DGE +KLK PIRV +VLKDYP  HVL++S+ VKHYG++AKPLEP
Sbjct: 1   MGNSIGGRNKAKVMKIDGETIKLKTPIRVWDVLKDYPTGHVLLDSQTVKHYGIRAKPLEP 60

Query: 61  QQDLNRKKIYFLLQLPKIAADNRPPPDRIPRRVRSSGVHMSAKDRLDLLMLSRRTMSEIA 120
           Q+ L  KKIYFL++LPK+A D      + PRRVRS G+HMSAKDRL+ LMLSRRT+S+++
Sbjct: 61  QESLKPKKIYFLVELPKLADDE---VHKAPRRVRSGGIHMSAKDRLECLMLSRRTVSDLS 120

Query: 121 ITRPSTTSATDSSAQ------PRFHSGPMQVKMKIPRSQVAKLMEESASEGEIAEKIIKM 180
           + RPS+TS      +               VKM++P+SQ+AKL+EES    E+AEKI+ +
Sbjct: 121 MVRPSSTSMVSDGVRLGXXXXXXXXXXXXXVKMRLPKSQMAKLVEESKDGVEVAEKILDL 180

Query: 181 YLKNEVNTGGGSAGDVNAGQ--HPE-HWKPSLVSSVRENSKVHREKRVSFLPMDKGEIHL 232
           Y+ N     GGS GD +AG   H E  WKP L  +  EN K  REKRVSF+P ++GEIHL
Sbjct: 181 YIGN-----GGSGGD-DAGNRIHREAPWKPGL-GTAGENFKPKREKRVSFIPQEEGEIHL 231

The following BLAST results are available for this feature:

BLAST of CsaV3_5G024000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140307.1	1.8e-126	100.00	PREDICTED: uncharacterized protein At1g66480-like [Cucumis sativus]	[more]
KGN51042.1	6.0e-114	98.65	hypothetical protein Csa_5G418770 [Cucumis sativus]	[more]
XP_022990967.1	1.1e-102	83.95	uncharacterized protein At1g66480-like [Cucurbita maxima]	[more]
XP_022956667.1	5.4e-99	81.22	uncharacterized protein At1g66480-like [Cucurbita moschata]	[more]
XP_023527466.1	7.1e-99	81.22	uncharacterized protein At1g66480-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_5G024000 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G66480.1	2.0e-39	46.60	plastid movement impaired 2	[more]
AT2G01340.1	1.4e-35	43.82	Encodes a protein whose expression is responsive to nematode infection.	[more]
AT5G37840.1	1.4e-35	40.43	BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT...	[more]
AT1G71015.1	1.2e-31	43.43	unknown protein	[more]

BLAST of CsaV3_5G024000 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6NLC8\|Y1648_ARATH	3.6e-38	46.60	Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 P...	[more]

BLAST of CsaV3_5G024000 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KRN5\|A0A0A0KRN5_CUCSA	3.9e-114	98.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G418770 PE=4 SV=1	[more]
tr\|A0A061EH62\|A0A061EH62_THECC	9.5e-60	56.03	Plastid movement impaired 2 OS=Theobroma cacao OX=3641 GN=TCM_019256 PE=4 SV=1	[more]
tr\|A0A0D2QMN0\|A0A0D2QMN0_GOSRA	6.2e-59	56.49	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G086600 PE=4 ...	[more]
tr\|A0A1U8P3D5\|A0A1U8P3D5_GOSHI	1.5e-57	55.23	uncharacterized protein At1g66480-like isoform X1 OS=Gossypium hirsutum OX=3635 ...	[more]
tr\|A0A1U8MDK5\|A0A1U8MDK5_GOSHI	4.4e-57	55.19	uncharacterized protein At1g66480-like OS=Gossypium hirsutum OX=3635 GN=LOC10793...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G024000.1	CsaV3_5G024000.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..203 e-value: 9.6E-23 score: 81.4
None	No IPR available	PANTHER	PTHR33148	FAMILY NOT NAMED	coord: 1..231
None	No IPR available	PANTHER	PTHR33148:SF6	SUBFAMILY NOT NAMED	coord: 1..231

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G024000	CSPI05G14920	Wild cucumber (PI 183967)	cpicucB284
CsaV3_5G024000	Cucsa.034830	Cucumber (Gy14) v1	cgycucB010
CsaV3_5G024000	CmaCh04G022990	Cucurbita maxima (Rimu)	cmacucB0887
CsaV3_5G024000	CmoCh04G024030	Cucurbita moschata (Rifu)	cmocucB0876
CsaV3_5G024000	Cp4.1LG01g20030	Cucurbita pepo (Zucchini)	cpecucB0545
CsaV3_5G024000	CsGy5G014780	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G024000	Carg18264	Silver-seed gourd	carcucB0564
CsaV3_5G024000	Cla019767	Watermelon (97103) v1	cucwmB407
CsaV3_5G024000	ClCG03G008730	Watermelon (Charleston Gray)	cucwcgB405
CsaV3_5G024000	Lsi09G009350	Bottle gourd (USVL1VR-Ls)	cuclsiB353
CsaV3_5G024000	Cla97C03G059950	Watermelon (97103) v2	cucwmbB386
CsaV3_5G024000	Bhi12G001074	Wax gourd	cucwgoB463

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G024000	Silver-seed gourd	carcucB0869
CsaV3_5G024000	Cucurbita maxima (Rimu)	cmacucB0343
CsaV3_5G024000	Cucurbita moschata (Rifu)	cmocucB0337
CsaV3_5G024000	Cucurbita pepo (Zucchini)	cpecucB0225
CsaV3_5G024000	Melon (DHL92) v3.5.1	cucmeB351
CsaV3_5G024000	Melon (DHL92) v3.6.1	cucmedB343