ClCG01G015050 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G015050
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRing finger protein, putative
LocationCG_Chr01 : 29326564 .. 29327079 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAACGCCACGGCGGACAGCGGCGGATTTCTTTCCTCAAGCAACATCGGCGGTTTCGGCTACGGAATCGGCGTCTCCTTAGGGCTTTTGATTCTCATCACTACAATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGCCTATCCTCCTCCGTCATTCAGAGGACCGCCAATCGCTCTTCACCGCAGGCGGAGGAGGAATTAGAAGCCGTCGTCGTCGAAATCGGACTCGATCAGGAGACGATTACGAGTTATCCGAAATTGCTGTACTCGGAAGCGAAGCTTCAGAAGAACGATTCGACTGCCTCTTGTTGTTCAATCTGTTTGGCCGATTACAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTGAGGCTTCATCCGACCTGTCCGGTTTGCCGGACCTCGCCGATTCCGACGCCGTTGTCGACTCCTCTGGCGGAGCAAGTTCCATTGGCGAGTCGGCGCGATTGA

mRNA sequence

ATGAACAACGCCACGGCGGACAGCGGCGGATTTCTTTCCTCAAGCAACATCGGCGGTTTCGGCTACGGAATCGGCGTCTCCTTAGGGCTTTTGATTCTCATCACTACAATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGCCTATCCTCCTCCGTCATTCAGAGGACCGCCAATCGCTCTTCACCGCAGGCGGAGGAGGAATTAGAAGCCGTCGTCGTCGAAATCGGACTCGATCAGGAGACGATTACGAGTTATCCGAAATTGCTGTACTCGGAAGCGAAGCTTCAGAAGAACGATTCGACTGCCTCTTGTTGTTCAATCTGTTTGGCCGATTACAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTGAGGCTTCATCCGACCTGTCCGGTTTGCCGGACCTCGCCGATTCCGACGCCGTTGTCGACTCCTCTGGCGGAGCAAGTTCCATTGGCGAGTCGGCGCGATTGA

Coding sequence (CDS)

ATGAACAACGCCACGGCGGACAGCGGCGGATTTCTTTCCTCAAGCAACATCGGCGGTTTCGGCTACGGAATCGGCGTCTCCTTAGGGCTTTTGATTCTCATCACTACAATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGCCTATCCTCCTCCGTCATTCAGAGGACCGCCAATCGCTCTTCACCGCAGGCGGAGGAGGAATTAGAAGCCGTCGTCGTCGAAATCGGACTCGATCAGGAGACGATTACGAGTTATCCGAAATTGCTGTACTCGGAAGCGAAGCTTCAGAAGAACGATTCGACTGCCTCTTGTTGTTCAATCTGTTTGGCCGATTACAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTGAGGCTTCATCCGACCTGTCCGGTTTGCCGGACCTCGCCGATTCCGACGCCGTTGTCGACTCCTCTGGCGGAGCAAGTTCCATTGGCGAGTCGGCGCGATTGA

Protein sequence

MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVIQRTANRSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Homology
[Close]
BLAST of ClCG01G015050 vs. Swiss-Prot
Match: ATL70_ARATH (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.6e-54
Identity = 105/164 (64.02%), Postives = 123/164 (75.00%), Query Frame = 1 

Query: 7   DSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVIQRTANRSSPQAE 66
           D  G L + +IGGF YGIGVS+G+L+LITTI L SYYCTRN LSSS  Q   N+ S +  
Sbjct: 51  DYNGLLGTDDIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSPSQ--TNQDSTRIH 110

Query: 67  EELEAVVVEI--GLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPD 126
                V++++  GLD++TI SYPK+LYSEAK     +TASCC+ICL DYK   +LR LPD
Sbjct: 111 HHHHHVIIDVVPGLDEDTIQSYPKILYSEAK---GPTTASCCAICLGDYKGKHLLRQLPD 170

Query: 127 CGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLAS 169
           C HLFHLKC+D WLRL+PTCPVCRTSP+PTPLSTPLAE VPLAS
Sbjct: 171 CNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLAS 209

[Close]
BLAST of ClCG01G015050 vs. Swiss-Prot
Match: ATL71_ARATH (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana GN=ATL71 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.6e-48
Identity = 100/183 (54.64%), Postives = 126/183 (68.85%), Query Frame = 1 

Query: 8   SGGFLSSSN-IGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVI--------QRTA 67
           SG +L++++ +GG  YGIGVS+G+L+LITTI L SYYCTR+ +S+S          QR +
Sbjct: 10  SGHWLTNTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRES 69

Query: 68  NRSSPQAEE-------ELEAVVVEI-GLDQETITSYPKLLYSEAK----LQKNDSTASCC 127
           N + P  +E       E + VVVE+ GL +E I  +PKL Y EA+    LQK  ST SCC
Sbjct: 70  NGTLPPGQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCC 129

Query: 128 SICLADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPL 170
           SICLADYK  D++R+LPDC HLFH  CVDPWLRLHPTCPVCRTSP+P+P  TP+A+ VP 
Sbjct: 130 SICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPF 189

[Close]
BLAST of ClCG01G015050 vs. Swiss-Prot
Match: ATL67_ARATH (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 5.5e-33
Identity = 76/175 (43.43%), Postives = 107/175 (61.14%), Query Frame = 1 

Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLS-SSVIQRTANRS-----------SPQAE 78
           GFGY I ++LG L+L++T+LL+SY C R+    ++ ++ T +R            + +  
Sbjct: 34  GFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDN 93

Query: 79  EELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASC----------CSICLADYKNS 138
           E+LEA  V +GLDQ  I SYPK  +S     K+ S AS           CSICL +YK +
Sbjct: 94  EDLEAGDVVVGLDQAVINSYPKFHFS-----KDTSAASSDGFGGGGDTTCSICLCEYKEA 153

Query: 139 DVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 168
           ++LR++P+C H FHL C+D WL+L+ +CPVCR SP+P    TPLSTPL+E VPL+
Sbjct: 154 EMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203

[Close]
BLAST of ClCG01G015050 vs. Swiss-Prot
Match: ATL69_ARATH (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana GN=ATL69 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-28
Identity = 63/152 (41.45%), Postives = 91/152 (59.87%), Query Frame = 1 

Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRN---GLSSSVIQRTANRSSPQAEEELEAVVVE 78
           G GYGI +++ +L+LI+ I+LASY C R+   G   +      +  SP AE       V+
Sbjct: 12  GLGYGIAIAVSILVLISFIMLASYICIRSKSTGRDEATSDVVLDLPSPAAE-------VK 71

Query: 79  IGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVD 138
           +GLD+  I SYP+++  +++     +   C SICL DY+  + +R +P+C H FH  CVD
Sbjct: 72  LGLDRPVIESYPRIVLGDSRRLPRPNNGPC-SICLCDYEAREPVRCIPECNHCFHTDCVD 131

Query: 139 PWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLA 168
            WLR   TCP+CR SP P+ L+TPL++ VPLA
Sbjct: 132 EWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]
BLAST of ClCG01G015050 vs. Swiss-Prot
Match: ATL68_ARATH (RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.7e-27
Identity = 68/177 (38.42%), Postives = 97/177 (54.80%), Query Frame = 1 

Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNG---LSSSVIQRTANRSSPQA---------- 78
           G GY I ++LG L+LI+TI+L+SY C R      S+S     AN S              
Sbjct: 25  GLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFV 84

Query: 79  --EEELEAVVVEIG-LDQETITSYPKLLYSEA--------KLQKNDSTASCCSICLADYK 138
             +++LE+  V +G LD   I SYPK  +++              +   + CSICL +Y 
Sbjct: 85  AEDDDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYM 144

Query: 139 NSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 168
             ++LR++P+C H FH+ C+D WL+L+ +CPVCR SP+P    TP STPL+E VPL+
Sbjct: 145 EEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPLS 201

[Close]
BLAST of ClCG01G015050 vs. TrEMBL
Match: A0A0A0KIW7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G476670 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 5.1e-86
Identity = 159/172 (92.44%), Postives = 166/172 (96.51%), Query Frame = 1 

Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVIQRTA-N 60
           MNN TA++GGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSV+QRT  N
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVVQRTPPN 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQA  E+++VVV+IGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]
BLAST of ClCG01G015050 vs. TrEMBL
Match: B9SDK9_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_0421540 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.3e-65
Identity = 121/173 (69.94%), Postives = 145/173 (83.82%), Query Frame = 1 

Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS--SVIQRTA 60
           MNN T+  GGFL S++IGGFGYGIGVS+G+L+LITTI LASY+CTRN      S+  R  
Sbjct: 1   MNN-TSSGGGFLGSNDIGGFGYGIGVSIGILLLITTITLASYFCTRNHQQQQQSMQTRRR 60

Query: 61  NRSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120
           NRS    ++ L+ +VVE+G+D+ T+ +YPKLLYS+AKL   D+TA+CCSICLADYK++D+
Sbjct: 61  NRSEEPPDDRLQDIVVEVGIDEATLKNYPKLLYSQAKLHNTDTTATCCSICLADYKSTDM 120

Query: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           LRLLPDCGHLFHLKCVDPWLRLHPTCPVCR SP+PTPLSTPLAE VPLASRRD
Sbjct: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRNSPLPTPLSTPLAEVVPLASRRD 172

[Close]
BLAST of ClCG01G015050 vs. TrEMBL
Match: M5VS68_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012474mg PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.7e-65
Identity = 129/172 (75.00%), Postives = 141/172 (81.98%), Query Frame = 1 

Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSS-VIQRTAN 60
           MNN T+DSGGFL S+NIGGFGYGIGVS+G+L+LITTI LASY+CTR     +    R  N
Sbjct: 1   MNN-TSDSGGFLGSNNIGGFGYGIGVSVGILLLITTITLASYFCTRTQQPPAPATHRNNN 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
              P    +L+  VV+IGLD  TI SYPK+LYSEAKLQK DSTASCCSICLADYK +D L
Sbjct: 61  ILDPP---DLQNFVVDIGLDDSTIESYPKMLYSEAKLQKTDSTASCCSICLADYKGTDTL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           RLLPDC HLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAE VPLASRRD
Sbjct: 121 RLLPDCKHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEVVPLASRRD 168

[Close]
BLAST of ClCG01G015050 vs. TrEMBL
Match: A0A067KIY4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08736 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.5e-65
Identity = 125/176 (71.02%), Postives = 144/176 (81.82%), Query Frame = 1 

Query: 1   MNNATAD---SGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLS--SSVIQ 60
           MNN T++    GGFL S++I GFGYGIGVS+G+L+LITTI LASY+CTR      SS   
Sbjct: 1   MNNTTSEVPNGGGFLGSNSISGFGYGIGVSIGILLLITTITLASYFCTRQQQQQPSSTAS 60

Query: 61  RTANRSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKN 120
           R  N +  Q  E L+ +VVE+GLD+ T+ SYPKLLYSEAK+QK DSTASCCSICLADYK+
Sbjct: 61  RRGNNTEDQPPE-LQNIVVEVGLDEATLKSYPKLLYSEAKIQKKDSTASCCSICLADYKS 120

Query: 121 SDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           +D+LRLLPDCGHLFHLKCVD WLR HPTCPVCRTSP+PTPLSTPLAE VPLASRRD
Sbjct: 121 TDMLRLLPDCGHLFHLKCVDQWLRRHPTCPVCRTSPLPTPLSTPLAEVVPLASRRD 175

[Close]
BLAST of ClCG01G015050 vs. TrEMBL
Match: A0A061EV28_THECC (RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_023049 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.2e-64
Identity = 123/171 (71.93%), Postives = 141/171 (82.46%), Query Frame = 1 

Query: 3   NATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVIQRTANRSS 62
           N+T DSGGFL S+NIGGFGYGIGVS+G+L+LITTI LASY+CTR             ++ 
Sbjct: 2   NSTTDSGGFLGSNNIGGFGYGIGVSVGILLLITTITLASYFCTRT---------PPPQAP 61

Query: 63  PQAEEEL----EAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 122
           P+A +E     E++VV++GLD+ETI SYPKLLYSEAKL   DST+SCCSICLADYK+SD 
Sbjct: 62  PRARQEPTLDPESLVVDLGLDEETIKSYPKLLYSEAKLHNKDSTSSCCSICLADYKSSDT 121

Query: 123 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASR 170
           LRLLPDC HLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAE VPL+SR
Sbjct: 122 LRLLPDCNHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEVVPLSSR 163

[Close]
BLAST of ClCG01G015050 vs. TAIR10
Match: AT2G35910.1 (AT2G35910.1 RING/U-box superfamily protein)

HSP 1 Score: 213.0 bits (541), Expect = 1.4e-55
Identity = 105/164 (64.02%), Postives = 123/164 (75.00%), Query Frame = 1 

Query: 7   DSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVIQRTANRSSPQAE 66
           D  G L + +IGGF YGIGVS+G+L+LITTI L SYYCTRN LSSS  Q   N+ S +  
Sbjct: 51  DYNGLLGTDDIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSPSQ--TNQDSTRIH 110

Query: 67  EELEAVVVEI--GLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPD 126
                V++++  GLD++TI SYPK+LYSEAK     +TASCC+ICL DYK   +LR LPD
Sbjct: 111 HHHHHVIIDVVPGLDEDTIQSYPKILYSEAK---GPTTASCCAICLGDYKGKHLLRQLPD 170

Query: 127 CGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLAS 169
           C HLFHLKC+D WLRL+PTCPVCRTSP+PTPLSTPLAE VPLAS
Sbjct: 171 CNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLAS 209

[Close]
BLAST of ClCG01G015050 vs. TAIR10
Match: AT5G06490.1 (AT5G06490.1 RING/U-box superfamily protein)

HSP 1 Score: 193.7 bits (491), Expect = 9.1e-50
Identity = 100/183 (54.64%), Postives = 126/183 (68.85%), Query Frame = 1 

Query: 8   SGGFLSSSN-IGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVI--------QRTA 67
           SG +L++++ +GG  YGIGVS+G+L+LITTI L SYYCTR+ +S+S          QR +
Sbjct: 10  SGHWLTNTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRES 69

Query: 68  NRSSPQAEE-------ELEAVVVEI-GLDQETITSYPKLLYSEAK----LQKNDSTASCC 127
           N + P  +E       E + VVVE+ GL +E I  +PKL Y EA+    LQK  ST SCC
Sbjct: 70  NGTLPPGQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCC 129

Query: 128 SICLADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPL 170
           SICLADYK  D++R+LPDC HLFH  CVDPWLRLHPTCPVCRTSP+P+P  TP+A+ VP 
Sbjct: 130 SICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPF 189

[Close]
BLAST of ClCG01G015050 vs. TAIR10
Match: AT2G46160.1 (AT2G46160.1 RING/U-box superfamily protein)

HSP 1 Score: 142.1 bits (357), Expect = 3.1e-34
Identity = 76/175 (43.43%), Postives = 107/175 (61.14%), Query Frame = 1 

Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLS-SSVIQRTANRS-----------SPQAE 78
           GFGY I ++LG L+L++T+LL+SY C R+    ++ ++ T +R            + +  
Sbjct: 34  GFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDN 93

Query: 79  EELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASC----------CSICLADYKNS 138
           E+LEA  V +GLDQ  I SYPK  +S     K+ S AS           CSICL +YK +
Sbjct: 94  EDLEAGDVVVGLDQAVINSYPKFHFS-----KDTSAASSDGFGGGGDTTCSICLCEYKEA 153

Query: 139 DVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 168
           ++LR++P+C H FHL C+D WL+L+ +CPVCR SP+P    TPLSTPL+E VPL+
Sbjct: 154 EMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203

[Close]
BLAST of ClCG01G015050 vs. TAIR10
Match: AT5G07040.1 (AT5G07040.1 RING/U-box superfamily protein)

HSP 1 Score: 127.9 bits (320), Expect = 6.1e-30
Identity = 63/152 (41.45%), Postives = 91/152 (59.87%), Query Frame = 1 

Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRN---GLSSSVIQRTANRSSPQAEEELEAVVVE 78
           G GYGI +++ +L+LI+ I+LASY C R+   G   +      +  SP AE       V+
Sbjct: 12  GLGYGIAIAVSILVLISFIMLASYICIRSKSTGRDEATSDVVLDLPSPAAE-------VK 71

Query: 79  IGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVD 138
           +GLD+  I SYP+++  +++     +   C SICL DY+  + +R +P+C H FH  CVD
Sbjct: 72  LGLDRPVIESYPRIVLGDSRRLPRPNNGPC-SICLCDYEAREPVRCIPECNHCFHTDCVD 131

Query: 139 PWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLA 168
            WLR   TCP+CR SP P+ L+TPL++ VPLA
Sbjct: 132 EWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]
BLAST of ClCG01G015050 vs. TAIR10
Match: AT3G61550.1 (AT3G61550.1 RING/U-box superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 1.5e-28
Identity = 68/177 (38.42%), Postives = 97/177 (54.80%), Query Frame = 1 

Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNG---LSSSVIQRTANRSSPQA---------- 78
           G GY I ++LG L+LI+TI+L+SY C R      S+S     AN S              
Sbjct: 25  GLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFV 84

Query: 79  --EEELEAVVVEIG-LDQETITSYPKLLYSEA--------KLQKNDSTASCCSICLADYK 138
             +++LE+  V +G LD   I SYPK  +++              +   + CSICL +Y 
Sbjct: 85  AEDDDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYM 144

Query: 139 NSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 168
             ++LR++P+C H FH+ C+D WL+L+ +CPVCR SP+P    TP STPL+E VPL+
Sbjct: 145 EEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPLS 201

[Close]
BLAST of ClCG01G015050 vs. NCBI nr
Match: gi|659125321|ref|XP_008462625.1| (PREDICTED: RING-H2 finger protein ATL70-like [Cucumis melo])

HSP 1 Score: 325.5 bits (833), Expect = 5.7e-86
Identity = 161/172 (93.60%), Postives = 166/172 (96.51%), Query Frame = 1 

Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS-SVIQRTAN 60
           MNN TA++GGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS SVIQ TA+
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQA  EL++VVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]
BLAST of ClCG01G015050 vs. NCBI nr
Match: gi|449451185|ref|XP_004143342.1| (PREDICTED: RING-H2 finger protein ATL70-like [Cucumis sativus])

HSP 1 Score: 325.1 bits (832), Expect = 7.4e-86
Identity = 159/172 (92.44%), Postives = 166/172 (96.51%), Query Frame = 1 

Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVIQRTA-N 60
           MNN TA++GGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSV+QRT  N
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVVQRTPPN 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQA  E+++VVV+IGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]
BLAST of ClCG01G015050 vs. NCBI nr
Match: gi|255566181|ref|XP_002524078.1| (PREDICTED: RING-H2 finger protein ATL70 [Ricinus communis])

HSP 1 Score: 257.3 bits (656), Expect = 1.9e-65
Identity = 121/173 (69.94%), Postives = 145/173 (83.82%), Query Frame = 1 

Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS--SVIQRTA 60
           MNN T+  GGFL S++IGGFGYGIGVS+G+L+LITTI LASY+CTRN      S+  R  
Sbjct: 1   MNN-TSSGGGFLGSNDIGGFGYGIGVSIGILLLITTITLASYFCTRNHQQQQQSMQTRRR 60

Query: 61  NRSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDV 120
           NRS    ++ L+ +VVE+G+D+ T+ +YPKLLYS+AKL   D+TA+CCSICLADYK++D+
Sbjct: 61  NRSEEPPDDRLQDIVVEVGIDEATLKNYPKLLYSQAKLHNTDTTATCCSICLADYKSTDM 120

Query: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           LRLLPDCGHLFHLKCVDPWLRLHPTCPVCR SP+PTPLSTPLAE VPLASRRD
Sbjct: 121 LRLLPDCGHLFHLKCVDPWLRLHPTCPVCRNSPLPTPLSTPLAEVVPLASRRD 172

[Close]
BLAST of ClCG01G015050 vs. NCBI nr
Match: gi|595807800|ref|XP_007202672.1| (hypothetical protein PRUPE_ppa012474mg [Prunus persica])

HSP 1 Score: 256.9 bits (655), Expect = 2.5e-65
Identity = 129/172 (75.00%), Postives = 141/172 (81.98%), Query Frame = 1 

Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSS-VIQRTAN 60
           MNN T+DSGGFL S+NIGGFGYGIGVS+G+L+LITTI LASY+CTR     +    R  N
Sbjct: 1   MNN-TSDSGGFLGSNNIGGFGYGIGVSVGILLLITTITLASYFCTRTQQPPAPATHRNNN 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
              P    +L+  VV+IGLD  TI SYPK+LYSEAKLQK DSTASCCSICLADYK +D L
Sbjct: 61  ILDPP---DLQNFVVDIGLDDSTIESYPKMLYSEAKLQKTDSTASCCSICLADYKGTDTL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           RLLPDC HLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAE VPLASRRD
Sbjct: 121 RLLPDCKHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEVVPLASRRD 168

[Close]
BLAST of ClCG01G015050 vs. NCBI nr
Match: gi|470135230|ref|XP_004303426.1| (PREDICTED: RING-H2 finger protein ATL70-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 256.1 bits (653), Expect = 4.2e-65
Identity = 126/171 (73.68%), Postives = 140/171 (81.87%), Query Frame = 1 

Query: 1   MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVIQRTANR 60
           MNN T D+ GFL S+NIGGFGYGIGVS+G+L+LITTI LASY+CTR    +    R  N 
Sbjct: 22  MNNTT-DTSGFLGSNNIGGFGYGIGVSVGILLLITTITLASYFCTRTPPPAHPATRGINA 81

Query: 61  SSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLR 120
             P    +L++ VV+IGLD  TI SYPK+LYSEAKLQK DSTASCCSICLADYK +D LR
Sbjct: 82  LDPP---DLQSFVVDIGLDDNTIKSYPKMLYSEAKLQKTDSTASCCSICLADYKATDTLR 141

Query: 121 LLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           LLPDC HLFHLKCVDPWLRLHPTCPVCRTSP+PTPLSTPLAE VPLASRRD
Sbjct: 142 LLPDCEHLFHLKCVDPWLRLHPTCPVCRTSPLPTPLSTPLAEVVPLASRRD 188

The following BLAST results are available for this feature:
BLAST of ClCG01G015050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL70_ARATH2.6e-5464.02RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2 SV=1[more]
ATL71_ARATH1.6e-4854.64Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana GN=ATL71 PE=3 SV=1[more]
ATL67_ARATH5.5e-3343.43RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2 SV=1[more]
ATL69_ARATH1.1e-2841.45Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana GN=ATL69 PE=3 SV=1[more]
ATL68_ARATH2.7e-2738.42RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2 SV=1[more]
BLAST of ClCG01G015050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIW7_CUCSA5.1e-8692.44Uncharacterized protein OS=Cucumis sativus GN=Csa_6G476670 PE=4 SV=1[more]
B9SDK9_RICCO1.3e-6569.94Ring finger protein, putative OS=Ricinus communis GN=RCOM_0421540 PE=4 SV=1[more]
M5VS68_PRUPE1.7e-6575.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012474mg PE=4 SV=1[more]
A0A067KIY4_JATCU6.5e-6571.02Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08736 PE=4 SV=1[more]
A0A061EV28_THECC3.2e-6471.93RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_023049 PE=4 SV=1[more]
BLAST of ClCG01G015050 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G35910.11.4e-5564.02 RING/U-box superfamily protein[more]
AT5G06490.19.1e-5054.64 RING/U-box superfamily protein[more]
AT2G46160.13.1e-3443.43 RING/U-box superfamily protein[more]
AT5G07040.16.1e-3041.45 RING/U-box superfamily protein[more]
AT3G61550.11.5e-2838.42 RING/U-box superfamily protein[more]
BLAST of ClCG01G015050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659125321|ref|XP_008462625.1|5.7e-8693.60PREDICTED: RING-H2 finger protein ATL70-like [Cucumis melo][more]
gi|449451185|ref|XP_004143342.1|7.4e-8692.44PREDICTED: RING-H2 finger protein ATL70-like [Cucumis sativus][more]
gi|255566181|ref|XP_002524078.1|1.9e-6569.94PREDICTED: RING-H2 finger protein ATL70 [Ricinus communis][more]
gi|595807800|ref|XP_007202672.1|2.5e-6575.00hypothetical protein PRUPE_ppa012474mg [Prunus persica][more]
gi|470135230|ref|XP_004303426.1|4.2e-6573.68PREDICTED: RING-H2 finger protein ATL70-like [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G015050.1ClCG01G015050.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 105..148
score: 4.6
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 106..147
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 106..148
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 103..149
score: 3.2
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 1..171
score: 3.7
NoneNo IPR availablePANTHERPTHR14155:SF90SUBFAMILY NOT NAMEDcoord: 1..171
score: 3.7
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 82..153
score: 2.45