Cp4.1LG10g03770 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g03770
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRing finger protein, putative
LocationCp4.1LG10 : 1843894 .. 1844409 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAACGGCACGGCGGACAGCGGCGGATTTCTGTCCTCAAACAACATCGGCGGTTTCGGCTACGGAATCGGCGTCTCGTTAGGGCTTTTGATTCTCATCACTACGATCCTCTTAGCTTCCTATTACTGCACCAGAAACGGCTTATCGTCGACGTCCGTGGTCGAGAGAAACTCCAATCGCTCGCCGCCGCAGGCGGAGGGAGAAGCCGCCGTCGTCGTCGATGTCGGACTCGATCAGGAAACGATTAAGAGTTATCCGAAATTGCTGTATTCGGAGGCGAAGCTTCTGAAGAACGATTCCTCTGCCTCTTGCTGTTCAATCTGTTTGGCCGATTACAAGAACTCGAATGTTCTTAGGGCTTTGCCTGATTGCGGCCATCTCTTTCACCTCAAGTGCATCGATCCGTGGCTCAGGCTTCACCCGACCTGTCCGGTTTGCCGGACCTCGCCGATTCCGACGCCGTTGTCGACTCCTCTGGCAGAGCAAGTTCCATTGGCCAGTCGACGGGATTGA

mRNA sequence

ATGAACAACGGCACGGCGGACAGCGGCGGATTTCTGTCCTCAAACAACATCGGCGGTTTCGGCTACGGAATCGGCGTCTCGTTAGGGCTTTTGATTCTCATCACTACGATCCTCTTAGCTTCCTATTACTGCACCAGAAACGGCTTATCGTCGACGTCCGTGGTCGAGAGAAACTCCAATCGCTCGCCGCCGCAGGCGGAGGGAGAAGCCGCCGTCGTCGTCGATGTCGGACTCGATCAGGAAACGATTAAGAGTTATCCGAAATTGCTGTATTCGGAGGCGAAGCTTCTGAAGAACGATTCCTCTGCCTCTTGCTGTTCAATCTGTTTGGCCGATTACAAGAACTCGAATGTTCTTAGGGCTTTGCCTGATTGCGGCCATCTCTTTCACCTCAAGTGCATCGATCCGTGGCTCAGGCTTCACCCGACCTGTCCGGTTTGCCGGACCTCGCCGATTCCGACGCCGTTGTCGACTCCTCTGGCAGAGCAAGTTCCATTGGCCAGTCGACGGGATTGA

Coding sequence (CDS)

ATGAACAACGGCACGGCGGACAGCGGCGGATTTCTGTCCTCAAACAACATCGGCGGTTTCGGCTACGGAATCGGCGTCTCGTTAGGGCTTTTGATTCTCATCACTACGATCCTCTTAGCTTCCTATTACTGCACCAGAAACGGCTTATCGTCGACGTCCGTGGTCGAGAGAAACTCCAATCGCTCGCCGCCGCAGGCGGAGGGAGAAGCCGCCGTCGTCGTCGATGTCGGACTCGATCAGGAAACGATTAAGAGTTATCCGAAATTGCTGTATTCGGAGGCGAAGCTTCTGAAGAACGATTCCTCTGCCTCTTGCTGTTCAATCTGTTTGGCCGATTACAAGAACTCGAATGTTCTTAGGGCTTTGCCTGATTGCGGCCATCTCTTTCACCTCAAGTGCATCGATCCGTGGCTCAGGCTTCACCCGACCTGTCCGGTTTGCCGGACCTCGCCGATTCCGACGCCGTTGTCGACTCCTCTGGCAGAGCAAGTTCCATTGGCCAGTCGACGGGATTGA

Protein sequence

MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSNRSPPQAEGEAAVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVLRALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Homology
[Close]
BLAST of Cp4.1LG10g03770 vs. Swiss-Prot
Match: ATL70_ARATH (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.9e-50
Identity = 106/165 (64.24%), Postives = 128/165 (77.58%), Query Frame = 1 

Query: 7   DSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSST-SVVERNSNRSPPQ 66
           D  G L +++IGGF YGIGVS+G+L+LITTI L SYYCTRN LSS+ S   ++S R    
Sbjct: 51  DYNGLLGTDDIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSPSQTNQDSTRIHHH 110

Query: 67  AEGEAAVVVDV--GLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVLRALP 126
                 V++DV  GLD++TI+SYPK+LYSEAK     ++ASCC+ICL DYK  ++LR LP
Sbjct: 111 HHH---VIIDVVPGLDEDTIQSYPKILYSEAK---GPTTASCCAICLGDYKGKHLLRQLP 170

Query: 127 DCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLAS 169
           DC HLFHLKCID WLRL+PTCPVCRTSP+PTPLSTPLAE VPLAS
Sbjct: 171 DCNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLAS 209

[Close]
BLAST of Cp4.1LG10g03770 vs. Swiss-Prot
Match: ATL71_ARATH (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana GN=ATL71 PE=3 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.9e-43
Identity = 93/183 (50.82%), Postives = 122/183 (66.67%), Query Frame = 1 

Query: 8   SGGFLSSNN-IGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVV-------ERNS 67
           SG +L++ + +GG  YGIGVS+G+L+LITTI L SYYCTR+ +S++          +R S
Sbjct: 10  SGHWLTNTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRES 69

Query: 68  NRSPPQA---------EGEAAVVVDVGLDQETIKSYPKLLYSEAK----LLKNDSSASCC 127
           N + P           E +  VV  +GL +E IK +PKL Y EA+    L K  S+ SCC
Sbjct: 70  NGTLPPGQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCC 129

Query: 128 SICLADYKNSNVLRALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPL 170
           SICLADYK  +++R LPDC HLFH  C+DPWLRLHPTCPVCRTSP+P+P  TP+A+ VP 
Sbjct: 130 SICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPF 189

[Close]
BLAST of Cp4.1LG10g03770 vs. Swiss-Prot
Match: ATL67_ARATH (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.8e-30
Identity = 78/176 (44.32%), Postives = 104/176 (59.09%), Query Frame = 1 

Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSNRS-------------PPQ 78
           GFGY I ++LG L+L++T+LL+SY C R+    T+ VE   +R                 
Sbjct: 34  GFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDN 93

Query: 79  AEGEAAVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASC----------CSICLADYKN 138
            + EA  VV VGLDQ  I SYPK  +S     K+ S+AS           CSICL +YK 
Sbjct: 94  EDLEAGDVV-VGLDQAVINSYPKFHFS-----KDTSAASSDGFGGGGDTTCSICLCEYKE 153

Query: 139 SNVLRALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 168
           + +LR +P+C H FHL C+D WL+L+ +CPVCR SP+P    TPLSTPL+E VPL+
Sbjct: 154 AEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203

[Close]
BLAST of Cp4.1LG10g03770 vs. Swiss-Prot
Match: ATL69_ARATH (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana GN=ATL69 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.7e-26
Identity = 60/149 (40.27%), Postives = 91/149 (61.07%), Query Frame = 1 

Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSNRSPPQAEGEAAVVVDVGL 78
           G GYGI +++ +L+LI+ I+LASY C R+  +       +     P    E    V +GL
Sbjct: 12  GLGYGIAIAVSILVLISFIMLASYICIRSKSTGRDEATSDVVLDLPSPAAE----VKLGL 71

Query: 79  DQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVLRALPDCGHLFHLKCIDPWL 138
           D+  I+SYP+++  +++ L   ++   CSICL DY+    +R +P+C H FH  C+D WL
Sbjct: 72  DRPVIESYPRIVLGDSRRLPRPNNGP-CSICLCDYEAREPVRCIPECNHCFHTDCVDEWL 131

Query: 139 RLHPTCPVCRTSPIPTPLSTPLAEQVPLA 168
           R   TCP+CR SP P+ L+TPL++ VPLA
Sbjct: 132 RTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]
BLAST of Cp4.1LG10g03770 vs. Swiss-Prot
Match: ATL68_ARATH (RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.8e-24
Identity = 67/177 (37.85%), Postives = 96/177 (54.24%), Query Frame = 1 

Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSNRSPPQAEG---------- 78
           G GY I ++LG L+LI+TI+L+SY C R      S    N+N +   ++           
Sbjct: 25  GLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFV 84

Query: 79  ------EAAVVVDVGLDQETIKSYPKLLYSE--AKLLKNDS------SASCCSICLADYK 138
                 E+  VV  GLD   I SYPK  +++    ++  D         + CSICL +Y 
Sbjct: 85  AEDDDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYM 144

Query: 139 NSNVLRALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 168
              +LR +P+C H FH+ C+D WL+L+ +CPVCR SP+P    TP STPL+E VPL+
Sbjct: 145 EEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPLS 201

[Close]
BLAST of Cp4.1LG10g03770 vs. TrEMBL
Match: A0A0A0KIW7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G476670 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.8e-78
Identity = 151/172 (87.79%), Postives = 160/172 (93.02%), Query Frame = 1 

Query: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSN 60
           MNNGTA++GGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS+ V     N
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVVQRTPPN 60

Query: 61  RSPPQAEGEA-AVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120
           RSPPQA GE  +VVVD+GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]
BLAST of Cp4.1LG10g03770 vs. TrEMBL
Match: M5VS68_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012474mg PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.1e-63
Identity = 124/170 (72.94%), Postives = 138/170 (81.18%), Query Frame = 1 

Query: 3   NGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSN-R 62
           N T+DSGGFL SNNIGGFGYGIGVS+G+L+LITTI LASY+CTR          RN+N  
Sbjct: 2   NNTSDSGGFLGSNNIGGFGYGIGVSVGILLLITTITLASYFCTRTQQPPAPATHRNNNIL 61

Query: 63  SPPQAEGEAAVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVLRA 122
            PP  +     VVD+GLD  TI+SYPK+LYSEAKL K DS+ASCCSICLADYK ++ LR 
Sbjct: 62  DPPDLQN---FVVDIGLDDSTIESYPKMLYSEAKLQKTDSTASCCSICLADYKGTDTLRL 121

Query: 123 LPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           LPDC HLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAE VPLASRRD
Sbjct: 122 LPDCKHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEVVPLASRRD 168

[Close]
BLAST of Cp4.1LG10g03770 vs. TrEMBL
Match: A0A061EV28_THECC (RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_023049 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.7e-60
Identity = 122/172 (70.93%), Postives = 139/172 (80.81%), Query Frame = 1 

Query: 3   NGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSNRS 62
           N T DSGGFL SNNIGGFGYGIGVS+G+L+LITTI LASY+CTR              ++
Sbjct: 2   NSTTDSGGFLGSNNIGGFGYGIGVSVGILLLITTITLASYFCTRTP----------PPQA 61

Query: 63  PPQAEGEA-----AVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSN 122
           PP+A  E      ++VVD+GLD+ETIKSYPKLLYSEAKL   DS++SCCSICLADYK+S+
Sbjct: 62  PPRARQEPTLDPESLVVDLGLDEETIKSYPKLLYSEAKLHNKDSTSSCCSICLADYKSSD 121

Query: 123 VLRALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASR 170
            LR LPDC HLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAE VPL+SR
Sbjct: 122 TLRLLPDCNHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEVVPLSSR 163

[Close]
BLAST of Cp4.1LG10g03770 vs. TrEMBL
Match: B9SDK9_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_0421540 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.1e-59
Identity = 115/172 (66.86%), Postives = 141/172 (81.98%), Query Frame = 1 

Query: 3   NGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVE---RNS 62
           N T+  GGFL SN+IGGFGYGIGVS+G+L+LITTI LASY+CTRN       ++   RN 
Sbjct: 2   NNTSSGGGFLGSNDIGGFGYGIGVSIGILLLITTITLASYFCTRNHQQQQQSMQTRRRNR 61

Query: 63  NRSPPQAEGEAAVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 122
           +  PP    +  +VV+VG+D+ T+K+YPKLLYS+AKL   D++A+CCSICLADYK++++L
Sbjct: 62  SEEPPDDRLQD-IVVEVGIDEATLKNYPKLLYSQAKLHNTDTTATCCSICLADYKSTDML 121

Query: 123 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           R LPDCGHLFHLKC+DPWLRLHPTCPVCR SP+PTPLSTPLAE VPLASRRD
Sbjct: 122 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRNSPLPTPLSTPLAEVVPLASRRD 172

[Close]
BLAST of Cp4.1LG10g03770 vs. TrEMBL
Match: A0A067KIY4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08736 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.8e-59
Identity = 119/175 (68.00%), Postives = 140/175 (80.00%), Query Frame = 1 

Query: 1   MNNGTAD---SGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS-TSVVE 60
           MNN T++    GGFL SN+I GFGYGIGVS+G+L+LITTI LASY+CTR      +S   
Sbjct: 1   MNNTTSEVPNGGGFLGSNSISGFGYGIGVSIGILLLITTITLASYFCTRQQQQQPSSTAS 60

Query: 61  RNSNRSPPQAEGEAAVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNS 120
           R  N +  Q      +VV+VGLD+ T+KSYPKLLYSEAK+ K DS+ASCCSICLADYK++
Sbjct: 61  RRGNNTEDQPPELQNIVVEVGLDEATLKSYPKLLYSEAKIQKKDSTASCCSICLADYKST 120

Query: 121 NVLRALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           ++LR LPDCGHLFHLKC+D WLR HPTCPVCRTSP+PTPLSTPLAE VPLASRRD
Sbjct: 121 DMLRLLPDCGHLFHLKCVDQWLRRHPTCPVCRTSPLPTPLSTPLAEVVPLASRRD 175

[Close]
BLAST of Cp4.1LG10g03770 vs. TAIR10
Match: AT2G35910.1 (AT2G35910.1 RING/U-box superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 1.6e-51
Identity = 106/165 (64.24%), Postives = 128/165 (77.58%), Query Frame = 1 

Query: 7   DSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSST-SVVERNSNRSPPQ 66
           D  G L +++IGGF YGIGVS+G+L+LITTI L SYYCTRN LSS+ S   ++S R    
Sbjct: 51  DYNGLLGTDDIGGFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSPSQTNQDSTRIHHH 110

Query: 67  AEGEAAVVVDV--GLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVLRALP 126
                 V++DV  GLD++TI+SYPK+LYSEAK     ++ASCC+ICL DYK  ++LR LP
Sbjct: 111 HHH---VIIDVVPGLDEDTIQSYPKILYSEAK---GPTTASCCAICLGDYKGKHLLRQLP 170

Query: 127 DCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLAS 169
           DC HLFHLKCID WLRL+PTCPVCRTSP+PTPLSTPLAE VPLAS
Sbjct: 171 DCNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLAS 209

[Close]
BLAST of Cp4.1LG10g03770 vs. TAIR10
Match: AT5G06490.1 (AT5G06490.1 RING/U-box superfamily protein)

HSP 1 Score: 175.3 bits (443), Expect = 3.3e-44
Identity = 93/183 (50.82%), Postives = 122/183 (66.67%), Query Frame = 1 

Query: 8   SGGFLSSNN-IGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVV-------ERNS 67
           SG +L++ + +GG  YGIGVS+G+L+LITTI L SYYCTR+ +S++          +R S
Sbjct: 10  SGHWLTNTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRES 69

Query: 68  NRSPPQA---------EGEAAVVVDVGLDQETIKSYPKLLYSEAK----LLKNDSSASCC 127
           N + P           E +  VV  +GL +E IK +PKL Y EA+    L K  S+ SCC
Sbjct: 70  NGTLPPGQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCC 129

Query: 128 SICLADYKNSNVLRALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPL 170
           SICLADYK  +++R LPDC HLFH  C+DPWLRLHPTCPVCRTSP+P+P  TP+A+ VP 
Sbjct: 130 SICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPF 189

[Close]
BLAST of Cp4.1LG10g03770 vs. TAIR10
Match: AT2G46160.1 (AT2G46160.1 RING/U-box superfamily protein)

HSP 1 Score: 131.3 bits (329), Expect = 5.5e-31
Identity = 78/176 (44.32%), Postives = 104/176 (59.09%), Query Frame = 1 

Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSNRS-------------PPQ 78
           GFGY I ++LG L+L++T+LL+SY C R+    T+ VE   +R                 
Sbjct: 34  GFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDN 93

Query: 79  AEGEAAVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASC----------CSICLADYKN 138
            + EA  VV VGLDQ  I SYPK  +S     K+ S+AS           CSICL +YK 
Sbjct: 94  EDLEAGDVV-VGLDQAVINSYPKFHFS-----KDTSAASSDGFGGGGDTTCSICLCEYKE 153

Query: 139 SNVLRALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 168
           + +LR +P+C H FHL C+D WL+L+ +CPVCR SP+P    TPLSTPL+E VPL+
Sbjct: 154 AEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLS 203

[Close]
BLAST of Cp4.1LG10g03770 vs. TAIR10
Match: AT5G07040.1 (AT5G07040.1 RING/U-box superfamily protein)

HSP 1 Score: 120.6 bits (301), Expect = 9.7e-28
Identity = 60/149 (40.27%), Postives = 91/149 (61.07%), Query Frame = 1 

Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSNRSPPQAEGEAAVVVDVGL 78
           G GYGI +++ +L+LI+ I+LASY C R+  +       +     P    E    V +GL
Sbjct: 12  GLGYGIAIAVSILVLISFIMLASYICIRSKSTGRDEATSDVVLDLPSPAAE----VKLGL 71

Query: 79  DQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVLRALPDCGHLFHLKCIDPWL 138
           D+  I+SYP+++  +++ L   ++   CSICL DY+    +R +P+C H FH  C+D WL
Sbjct: 72  DRPVIESYPRIVLGDSRRLPRPNNGP-CSICLCDYEAREPVRCIPECNHCFHTDCVDEWL 131

Query: 139 RLHPTCPVCRTSPIPTPLSTPLAEQVPLA 168
           R   TCP+CR SP P+ L+TPL++ VPLA
Sbjct: 132 RTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]
BLAST of Cp4.1LG10g03770 vs. TAIR10
Match: AT3G61550.1 (AT3G61550.1 RING/U-box superfamily protein)

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-25
Identity = 67/177 (37.85%), Postives = 96/177 (54.24%), Query Frame = 1 

Query: 19  GFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSNRSPPQAEG---------- 78
           G GY I ++LG L+LI+TI+L+SY C R      S    N+N +   ++           
Sbjct: 25  GLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFV 84

Query: 79  ------EAAVVVDVGLDQETIKSYPKLLYSE--AKLLKNDS------SASCCSICLADYK 138
                 E+  VV  GLD   I SYPK  +++    ++  D         + CSICL +Y 
Sbjct: 85  AEDDDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYM 144

Query: 139 NSNVLRALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIP----TPLSTPLAEQVPLA 168
              +LR +P+C H FH+ C+D WL+L+ +CPVCR SP+P    TP STPL+E VPL+
Sbjct: 145 EEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPLS 201

[Close]
BLAST of Cp4.1LG10g03770 vs. NCBI nr
Match: gi|659125321|ref|XP_008462625.1| (PREDICTED: RING-H2 finger protein ATL70-like [Cucumis melo])

HSP 1 Score: 302.4 bits (773), Expect = 5.1e-79
Identity = 150/172 (87.21%), Postives = 163/172 (94.77%), Query Frame = 1 

Query: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSN 60
           MNNGTA++GGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSV++  ++
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVIQSTAS 60

Query: 61  RSPPQAEGEA-AVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120
           RSPPQA  E  +VVV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]
BLAST of Cp4.1LG10g03770 vs. NCBI nr
Match: gi|449451185|ref|XP_004143342.1| (PREDICTED: RING-H2 finger protein ATL70-like [Cucumis sativus])

HSP 1 Score: 300.1 bits (767), Expect = 2.5e-78
Identity = 151/172 (87.79%), Postives = 160/172 (93.02%), Query Frame = 1 

Query: 1   MNNGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSN 60
           MNNGTA++GGFLSS+NIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSS+ V     N
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVVQRTPPN 60

Query: 61  RSPPQAEGEA-AVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120
           RSPPQA GE  +VVVD+GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]
BLAST of Cp4.1LG10g03770 vs. NCBI nr
Match: gi|595807800|ref|XP_007202672.1| (hypothetical protein PRUPE_ppa012474mg [Prunus persica])

HSP 1 Score: 248.4 bits (633), Expect = 8.8e-63
Identity = 124/170 (72.94%), Postives = 138/170 (81.18%), Query Frame = 1 

Query: 3   NGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSN-R 62
           N T+DSGGFL SNNIGGFGYGIGVS+G+L+LITTI LASY+CTR          RN+N  
Sbjct: 2   NNTSDSGGFLGSNNIGGFGYGIGVSVGILLLITTITLASYFCTRTQQPPAPATHRNNNIL 61

Query: 63  SPPQAEGEAAVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVLRA 122
            PP  +     VVD+GLD  TI+SYPK+LYSEAKL K DS+ASCCSICLADYK ++ LR 
Sbjct: 62  DPPDLQN---FVVDIGLDDSTIESYPKMLYSEAKLQKTDSTASCCSICLADYKGTDTLRL 121

Query: 123 LPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           LPDC HLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAE VPLASRRD
Sbjct: 122 LPDCKHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEVVPLASRRD 168

[Close]
BLAST of Cp4.1LG10g03770 vs. NCBI nr
Match: gi|645271779|ref|XP_008241078.1| (PREDICTED: RING-H2 finger protein ATL70 [Prunus mume])

HSP 1 Score: 246.1 bits (627), Expect = 4.4e-62
Identity = 123/170 (72.35%), Postives = 137/170 (80.59%), Query Frame = 1 

Query: 3   NGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSNR- 62
           N T+DSGGFL SNNIGGFGYGIGVS+G+L+LITTI LASY+CTR          RN+N  
Sbjct: 2   NNTSDSGGFLGSNNIGGFGYGIGVSVGILLLITTITLASYFCTRTQQPPAPATHRNNNTL 61

Query: 63  SPPQAEGEAAVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVLRA 122
            PP  +     VVD+GLD  TI+SYPK+LYSEAKL K  S+ASCCSICLADYK ++ LR 
Sbjct: 62  DPPDLQN---FVVDIGLDDSTIESYPKMLYSEAKLQKTGSTASCCSICLADYKGTDTLRL 121

Query: 123 LPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           LPDC HLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAE VPLASRRD
Sbjct: 122 LPDCKHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEVVPLASRRD 168

[Close]
BLAST of Cp4.1LG10g03770 vs. NCBI nr
Match: gi|694319846|ref|XP_009348829.1| (PREDICTED: RING-H2 finger protein ATL70-like [Pyrus x bretschneideri])

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-60
Identity = 124/171 (72.51%), Postives = 137/171 (80.12%), Query Frame = 1 

Query: 3   NGTADSGGFLSSNNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSTSVVERNSNRS 62
           N T+DSGGFL SNNIG FGYGIGVS+G+L+LITTI LASY+C R          RN+  +
Sbjct: 2   NATSDSGGFLGSNNIGSFGYGIGVSVGVLLLITTITLASYFCARTQQPPAPPTRRNAGDA 61

Query: 63  --PPQAEGEAAVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVLR 122
             PP  E     VVD+GLD  TI+SYPKLLYSEAKL   DS+ASCCSICLADYKNS++LR
Sbjct: 62  MDPPGVEN---FVVDIGLDDNTIQSYPKLLYSEAKLQMKDSTASCCSICLADYKNSDMLR 121

Query: 123 ALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
            LPDC HLFHLKCIDPWLRL+PTCPVCRTSPIPTPLSTPLAE VPLASRRD
Sbjct: 122 LLPDCRHLFHLKCIDPWLRLNPTCPVCRTSPIPTPLSTPLAEVVPLASRRD 169

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g03770 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL70_ARATH2.9e-5064.24RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2 SV=1[more]
ATL71_ARATH5.9e-4350.82Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana GN=ATL71 PE=3 SV=1[more]
ATL67_ARATH9.8e-3044.32RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2 SV=1[more]
ATL69_ARATH1.7e-2640.27Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana GN=ATL69 PE=3 SV=1[more]
ATL68_ARATH2.8e-2437.85RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2 SV=1[more]
BLAST of Cp4.1LG10g03770 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIW7_CUCSA1.8e-7887.79Uncharacterized protein OS=Cucumis sativus GN=Csa_6G476670 PE=4 SV=1[more]
M5VS68_PRUPE6.1e-6372.94Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012474mg PE=4 SV=1[more]
A0A061EV28_THECC1.7e-6070.93RING/U-box superfamily protein OS=Theobroma cacao GN=TCM_023049 PE=4 SV=1[more]
B9SDK9_RICCO1.1e-5966.86Ring finger protein, putative OS=Ricinus communis GN=RCOM_0421540 PE=4 SV=1[more]
A0A067KIY4_JATCU1.8e-5968.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08736 PE=4 SV=1[more]
BLAST of Cp4.1LG10g03770 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G35910.11.6e-5164.24 RING/U-box superfamily protein[more]
AT5G06490.13.3e-4450.82 RING/U-box superfamily protein[more]
AT2G46160.15.5e-3144.32 RING/U-box superfamily protein[more]
AT5G07040.19.7e-2840.27 RING/U-box superfamily protein[more]
AT3G61550.11.6e-2537.85 RING/U-box superfamily protein[more]
BLAST of Cp4.1LG10g03770 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659125321|ref|XP_008462625.1|5.1e-7987.21PREDICTED: RING-H2 finger protein ATL70-like [Cucumis melo][more]
gi|449451185|ref|XP_004143342.1|2.5e-7887.79PREDICTED: RING-H2 finger protein ATL70-like [Cucumis sativus][more]
gi|595807800|ref|XP_007202672.1|8.8e-6372.94hypothetical protein PRUPE_ppa012474mg [Prunus persica][more]
gi|645271779|ref|XP_008241078.1|4.4e-6272.35PREDICTED: RING-H2 finger protein ATL70 [Prunus mume][more]
gi|694319846|ref|XP_009348829.1|1.1e-6072.51PREDICTED: RING-H2 finger protein ATL70-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0001666 response to hypoxia
biological_process GO:0042550 photosystem I stabilization
biological_process GO:0009877 nodulation
biological_process GO:0006655 phosphatidylglycerol biosynthetic process
biological_process GO:0019375 galactolipid biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0016036 cellular response to phosphate starvation
biological_process GO:0016117 carotenoid biosynthetic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009707 chloroplast outer membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0043661 peribacteroid membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0046481 digalactosyldiacylglycerol synthase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g03770.1Cp4.1LG10g03770.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 105..148
score: 7.2
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 106..147
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 106..148
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 102..149
score: 1.9
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 10..171
score: 2.2
NoneNo IPR availablePANTHERPTHR14155:SF90SUBFAMILY NOT NAMEDcoord: 10..171
score: 2.2
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 82..153
score: 1.17

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g03770Cucsa.083830Cucumber (Gy14) v1cgycpeB0145
Cp4.1LG10g03770CmaCh14G003690Cucurbita maxima (Rimu)cmacpeB254
Cp4.1LG10g03770CmaCh03G011170Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g03770CmaCh07G008210Cucurbita maxima (Rimu)cmacpeB866
Cp4.1LG10g03770CmoCh03G011060Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g03770CmoCh14G003690Cucurbita moschata (Rifu)cmocpeB218
Cp4.1LG10g03770CmoCh07G008490Cucurbita moschata (Rifu)cmocpeB806
Cp4.1LG10g03770Cla008404Watermelon (97103) v1cpewmB075
Cp4.1LG10g03770Csa6G476670Cucumber (Chinese Long) v2cpecuB088
Cp4.1LG10g03770MELO3C024590Melon (DHL92) v3.5.1cpemeB069
Cp4.1LG10g03770MELO3C009554Melon (DHL92) v3.5.1cpemeB054
Cp4.1LG10g03770ClCG10G018180Watermelon (Charleston Gray)cpewcgB057
Cp4.1LG10g03770ClCG01G015050Watermelon (Charleston Gray)cpewcgB061
Cp4.1LG10g03770CSPI03G35770Wild cucumber (PI 183967)cpecpiB059
Cp4.1LG10g03770CSPI06G26130Wild cucumber (PI 183967)cpecpiB084
Cp4.1LG10g03770Lsi01G011800Bottle gourd (USVL1VR-Ls)cpelsiB054
Cp4.1LG10g03770Lsi03G018060Bottle gourd (USVL1VR-Ls)cpelsiB062
Cp4.1LG10g03770MELO3C024590.2Melon (DHL92) v3.6.1cpemedB090
Cp4.1LG10g03770MELO3C009554.2Melon (DHL92) v3.6.1cpemedB071
Cp4.1LG10g03770CsaV3_6G041160Cucumber (Chinese Long) v3cpecucB0093
Cp4.1LG10g03770Bhi03G001373Wax gourdcpewgoB0101
Cp4.1LG10g03770CsGy6G025510Cucumber (Gy14) v2cgybcpeB710
Cp4.1LG10g03770Carg03615Silver-seed gourdcarcpeB0348
Cp4.1LG10g03770Carg05332Silver-seed gourdcarcpeB1128
Cp4.1LG10g03770Carg10515Silver-seed gourdcarcpeB0337
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG10g03770Cp4.1LG19g04800Cucurbita pepo (Zucchini)cpecpeB076
Cp4.1LG10g03770Cp4.1LG03g00390Cucurbita pepo (Zucchini)cpecpeB092
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g03770Wild cucumber (PI 183967)cpecpiB081
Cp4.1LG10g03770Cucumber (Chinese Long) v2cpecuB085