Cla97C01G014050 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G014050
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Ring finger protein, putative
Location	Cla97Chr01 : 27829980 .. 27830495 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAACGCCACGGCGGACAGCGGCGGATTTCTTTCCTCAAGCAACATCGGCGGTTTCGGCTACGGAATCGGCGTCTCCTTAGGGCTTTTGATTCTCATCACTACAATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGCCTATCCTCCTCCGTCATTCAGAGGACCGCCAATCGCTCTTCACCGCAGGCGGAGGAGGAATTAGAAGCCGTCGTCGTCGAAATCGGACTCGATCAGGAGACGATTACGAGTTATCCGAAATTGCTGTACTCGGAAGCGAAGCTTCAGAAGAACGATTCGACTGCCTCTTGTTGTTCAATCTGTTTGGCCGATTACAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTGAGGCTTCATCCGACCTGTCCGGTTTGCCGGACCTCGCCGATTCCGACGCCGTTGTCGACTCCTCTGGCGGAGCAAGTTCCATTGGCGAGTCGGCGCGATTGA

mRNA sequence

ATGAACAACGCCACGGCGGACAGCGGCGGATTTCTTTCCTCAAGCAACATCGGCGGTTTCGGCTACGGAATCGGCGTCTCCTTAGGGCTTTTGATTCTCATCACTACAATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGCCTATCCTCCTCCGTCATTCAGAGGACCGCCAATCGCTCTTCACCGCAGGCGGAGGAGGAATTAGAAGCCGTCGTCGTCGAAATCGGACTCGATCAGGAGACGATTACGAGTTATCCGAAATTGCTGTACTCGGAAGCGAAGCTTCAGAAGAACGATTCGACTGCCTCTTGTTGTTCAATCTGTTTGGCCGATTACAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTGAGGCTTCATCCGACCTGTCCGGTTTGCCGGACCTCGCCGATTCCGACGCCGTTGTCGACTCCTCTGGCGGAGCAAGTTCCATTGGCGAGTCGGCGCGATTGA

Coding sequence (CDS)

ATGAACAACGCCACGGCGGACAGCGGCGGATTTCTTTCCTCAAGCAACATCGGCGGTTTCGGCTACGGAATCGGCGTCTCCTTAGGGCTTTTGATTCTCATCACTACAATCCTCTTGGCTTCCTATTACTGTACCAGAAACGGCCTATCCTCCTCCGTCATTCAGAGGACCGCCAATCGCTCTTCACCGCAGGCGGAGGAGGAATTAGAAGCCGTCGTCGTCGAAATCGGACTCGATCAGGAGACGATTACGAGTTATCCGAAATTGCTGTACTCGGAAGCGAAGCTTCAGAAGAACGATTCGACTGCCTCTTGTTGTTCAATCTGTTTGGCCGATTACAAGAACTCGGATGTTCTTCGGCTTTTGCCTGATTGCGGTCATCTCTTTCATCTCAAGTGCGTCGATCCGTGGCTGAGGCTTCATCCGACCTGTCCGGTTTGCCGGACCTCGCCGATTCCGACGCCGTTGTCGACTCCTCTGGCGGAGCAAGTTCCATTGGCGAGTCGGCGCGATTGA

Protein sequence

MNNATADSGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVIQRTANRSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD

Homology

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BLAST of Cla97C01G014050 vs. NCBI nr
Match: XP_008462625.1 (PREDICTED: RING-H2 finger protein ATL70-like [Cucumis melo])

HSP 1 Score: 289.7 bits (740), Expect = 6.7e-75
Identity = 161/172 (93.60%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSS-SVIQRTAN 60
           MNN TA++GGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSS SVIQ TA+
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSSTSVIQSTAS 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQA  EL++VVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

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BLAST of Cla97C01G014050 vs. NCBI nr
Match: XP_004143342.1 (PREDICTED: RING-H2 finger protein ATL70-like [Cucumis sativus] >KGN48327.1 hypothetical protein Csa_6G476670 [Cucumis sativus])

HSP 1 Score: 289.3 bits (739), Expect = 8.7e-75
Identity = 159/172 (92.44%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSSSVIQRT-AN 60
           MNN TA++GGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSSSV+QRT  N
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSSSVVQRTPPN 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQA  E+++VVV+IGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

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BLAST of Cla97C01G014050 vs. NCBI nr
Match: XP_023544988.1 (RING-H2 finger protein ATL70-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.6 bits (701), Expect = 2.2e-70
Identity = 152/172 (88.37%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSS-SVIQRTAN 60
           MNN TADSGGFLSS+NIGGFG XXXXXXXXXXXXTTILLASYYCTRNGLSS SV++R +N
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYXXXXXXXXXXXXTTILLASYYCTRNGLSSTSVVERNSN 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQAE E  AVVV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAEGE-AAVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

[Close]

BLAST of Cla97C01G014050 vs. NCBI nr
Match: XP_022977896.1 (RING-H2 finger protein ATL70-like [Cucurbita maxima])

HSP 1 Score: 274.2 bits (700), Expect = 2.9e-70
Identity = 151/172 (87.79%), Postives = 159/172 (92.44%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSS-SVIQRTAN 60
           MNN TADSGGFLSS+NIGGFG XXXXXXXXXXX TTILLASYYCTRNGLSS SV++R  N
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYXXXXXXXXXXXITTILLASYYCTRNGLSSTSVVERNTN 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQAE E  AVVV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAEGE-AAVVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

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BLAST of Cla97C01G014050 vs. NCBI nr
Match: XP_022925965.1 (RING-H2 finger protein ATL70-like [Cucurbita moschata])

HSP 1 Score: 273.1 bits (697), Expect = 6.5e-70
Identity = 151/172 (87.79%), Postives = 160/172 (93.02%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSS-SVIQRTAN 60
           MNN TADSGGFLSS+NIGGFG XXXXXXXXXXXXTTILLASYYCTRNGLSS SV++R +N
Sbjct: 1   MNNGTADSGGFLSSNNIGGFGYXXXXXXXXXXXXTTILLASYYCTRNGLSSTSVVERNSN 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQAE E  A VV++GLDQETI SYPKLLYSEAKL KNDS+ASCCSICLADYKNS+VL
Sbjct: 61  RSPPQAEGE-AAAVVDVGLDQETIKSYPKLLYSEAKLLKNDSSASCCSICLADYKNSNVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           R LPDCGHLFHLKC+DPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RALPDCGHLFHLKCIDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 171

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BLAST of Cla97C01G014050 vs. TrEMBL
Match: tr|A0A1S3CHE9|A0A1S3CHE9_CUCME (RING-H2 finger protein ATL70-like OS=Cucumis melo OX=3656 GN=LOC103500941 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 4.4e-75
Identity = 161/172 (93.60%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSS-SVIQRTAN 60
           MNN TA++GGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSS SVIQ TA+
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSSTSVIQSTAS 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQA  EL++VVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVAELDSVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]

BLAST of Cla97C01G014050 vs. TrEMBL
Match: tr|A0A0A0KIW7|A0A0A0KIW7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G476670 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 5.8e-75
Identity = 159/172 (92.44%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSSSVIQRT-AN 60
           MNN TA++GGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSSSV+QRT  N
Sbjct: 1   MNNGTAETGGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSSSVVQRTPPN 60

Query: 61  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120
           RS PQA  E+++VVV+IGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL
Sbjct: 61  RSPPQAVGEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 120

Query: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172
           RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD 172

[Close]

BLAST of Cla97C01G014050 vs. TrEMBL
Match: tr|A0A1R3HFS8|A0A1R3HFS8_COCAP (Zinc finger, RING-type OS=Corchorus capsularis OX=210143 GN=CCACVL1_19612 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 4.8e-53
Identity = 123/171 (71.93%), Postives = 137/171 (80.12%), Query Frame = 0


Query: 3   NATADSGGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLS---SSVIQRTAN 62
           N T+DSGGFL S+NIGGF XXXXXXXXXXXXX     ASY+CTR+          +  A 
Sbjct: 2   NTTSDSGGFLGSNNIGGFXXXXXXXXXXXXXXXXXXXASYFCTRSNTQQPHGGGARSRAR 61

Query: 63  RSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVL 122
           R +     + E+ VV++GLD+ETI SYPKLLYSEAKLQK DSTASCCSICLADYK+SD L
Sbjct: 62  REAATTIHDSESFVVDVGLDEETIKSYPKLLYSEAKLQKKDSTASCCSICLADYKSSDTL 121

Query: 123 RLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRR 171
           R+LPDC HLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAE VPLASR+
Sbjct: 122 RVLPDCNHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEVVPLASRQ 172

[Close]

BLAST of Cla97C01G014050 vs. TrEMBL
Match: tr|A0A2R6RA30|A0A2R6RA30_ACTCH (RING-H2 finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc16963 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 4.8e-53
Identity = 108/169 (63.91%), Postives = 126/169 (74.56%), Query Frame = 0


Query: 1   MNNATADSGGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSSSVIQRTANR 60
           MN     SGGFL S N+GGFG             TTI LASY+CTR  +S+  +     +
Sbjct: 1   MNTTAGGSGGFLGSENVGGFGYTIGVSVGILLLITTITLASYFCTR--VSTPPVGEANRQ 60

Query: 61  SSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLR 120
             P   ++   VVVE+GLD+ T+ SYP+LLYSEAKL+K D+TA+CCSICLADYK SD+LR
Sbjct: 61  HEP--PDQQPCVVVEVGLDEATLGSYPRLLYSEAKLKKKDTTATCCSICLADYKGSDMLR 120

Query: 121 LLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASR 170
           LLPDCGHLFHLKCVDPWLRLHPTCP+CRTSP+PTPLSTPLAE VPLASR
Sbjct: 121 LLPDCGHLFHLKCVDPWLRLHPTCPMCRTSPVPTPLSTPLAEVVPLASR 165

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BLAST of Cla97C01G014050 vs. TrEMBL
Match: tr|A0A2C9V811|A0A2C9V811_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G043600 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.8e-52
Identity = 120/168 (71.43%), Postives = 137/168 (81.55%), Query Frame = 0


Query: 3   NATADSGGFLSSSNIGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSSSVIQRTANRSS 62
           + +  +GGFL SSNIGGF XXXXXXXXXXXXX    LASY+CTR    SSV  + ++R  
Sbjct: 5   DGSGGAGGFLGSSNIGGFXXXXXXXXXXXXXXXXXXLASYFCTRTQQPSSVANQRSDRED 64

Query: 63  PQAEEELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLL 122
                EL+ +VV+IGLD+ T+ SYPKL+YSEAKL K DST +CCSICLADYKN+D+LRLL
Sbjct: 65  QSL--ELQNIVVDIGLDEATLKSYPKLMYSEAKLHKKDSTGACCSICLADYKNTDMLRLL 124

Query: 123 PDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRR 171
           PDCGHLFHLKCVDPWLR HPTCPVCRTSP+PTPLSTPLAE VPLASRR
Sbjct: 125 PDCGHLFHLKCVDPWLRQHPTCPVCRTSPLPTPLSTPLAEVVPLASRR 170

[Close]

BLAST of Cla97C01G014050 vs. Swiss-Prot
Match: sp|Q9FG21|ATL71_ARATH (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-38
Identity = 90/183 (49.18%), Postives = 115/183 (62.84%), Query Frame = 0


Query: 8   SGGFLSSSN-IGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSSSVI--------QRTA 67
           SG +L++++ +GG               TTI L SYYCTR+ +S+S          QR +
Sbjct: 10  SGHWLTNTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRES 69

Query: 68  NRSSPQAEE-------ELEAVVVEI-GLDQETITSYPKLLYSEAK----LQKNDSTASCC 127
           N + P  +E       E + VVVE+ GL +E I  +PKL Y EA+    LQK  ST SCC
Sbjct: 70  NGTLPPGQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCC 129

Query: 128 SICLADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPL 170
           SICLADYK  D++R+LPDC HLFH  CVDPWLRLHPTCPVCRTSP+P+P  TP+A+ VP 
Sbjct: 130 SICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPF 189

[Close]

BLAST of Cla97C01G014050 vs. Swiss-Prot
Match: sp|Q8RX29|ATL70_ARATH (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.6e-35
Identity = 69/92 (75.00%), Postives = 78/92 (84.78%), Query Frame = 0


Query: 77  GLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDP 136
           GLD++TI SYPK+LYSEA   K  +TASCC+ICL DYK   +LR LPDC HLFHLKC+D 
Sbjct: 121 GLDEDTIQSYPKILYSEA---KGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDT 180

Query: 137 WLRLHPTCPVCRTSPIPTPLSTPLAEQVPLAS 169
           WLRL+PTCPVCRTSP+PTPLSTPLAE VPLAS
Sbjct: 181 WLRLNPTCPVCRTSPLPTPLSTPLAEVVPLAS 209

[Close]

BLAST of Cla97C01G014050 vs. Swiss-Prot
Match: sp|O82353|ATL67_ARATH (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.5e-21
Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = 0


Query: 19  GFGXXXXXXXXXXXXXTTILLASYYCTRNG-LSSSVIQRTANRS-----------SPQAE 78
           GFG             +T+LL+SY C R+    ++ ++ T +R            + +  
Sbjct: 34  GFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDN 93

Query: 79  EELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTAS----------CCSICLADYKNS 138
           E+LEA  V +GLDQ  I SYPK  +S     K+ S AS           CSICL +YK +
Sbjct: 94  EDLEAGDVVVGLDQAVINSYPKFHFS-----KDTSAASSDGFGGGGDTTCSICLCEYKEA 153

Query: 139 DVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP 154
           ++LR++P+C H FHL C+D WL+L+ +CPVCR SP+P
Sbjct: 154 EMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLP 185

[Close]

BLAST of Cla97C01G014050 vs. Swiss-Prot
Match: sp|Q9FL42|ATL69_ARATH (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 9.3e-20
Identity = 44/97 (45.36%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 71  AVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFH 130
           A  V++GLD+  I SYP+++  +++     +    CSICL DY+  + +R +P+C H FH
Sbjct: 60  AAEVKLGLDRPVIESYPRIVLGDSRRLPRPNNGP-CSICLCDYEAREPVRCIPECNHCFH 119

Query: 131 LKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLA 168
             CVD WLR   TCP+CR SP P+ L+TPL++ VPLA
Sbjct: 120 TDCVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]

BLAST of Cla97C01G014050 vs. Swiss-Prot
Match: sp|Q9SKK8|ATL22_ARATH (RING-H2 finger protein ATL22 OS=Arabidopsis thaliana OX=3702 GN=ATL22 PE=2 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 2.3e-18
Identity = 44/118 (37.29%), Postives = 64/118 (54.24%), Query Frame = 0


Query: 36  TILLASYYCTRNGLSSSVIQRTANRSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAK 95
           T  +    C+   +SS + Q    R S     +    V  IGLD+ TI SY K+   E++
Sbjct: 257 TFCVGLVMCSSERVSSQIQQAVVARLSGSVTSQPSNEVARIGLDESTIESYKKVELGESR 316

Query: 96  LQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP 154
                S    C ICL++Y   + +R LP+C H FH +C+D WL+LH +CPVCR++P P
Sbjct: 317 RLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVCRSNPSP 374

[Close]

BLAST of Cla97C01G014050 vs. TAIR10
Match: AT5G06490.1 (RING/U-box superfamily protein)

HSP 1 Score: 160.6 bits (405), Expect = 8.5e-40
Identity = 90/183 (49.18%), Postives = 115/183 (62.84%), Query Frame = 0


Query: 8   SGGFLSSSN-IGGFGXXXXXXXXXXXXXTTILLASYYCTRNGLSSSVI--------QRTA 67
           SG +L++++ +GG               TTI L SYYCTR+ +S+S          QR +
Sbjct: 10  SGHWLTNTDRMGGLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRES 69

Query: 68  NRSSPQAEE-------ELEAVVVEI-GLDQETITSYPKLLYSEAK----LQKNDSTASCC 127
           N + P  +E       E + VVVE+ GL +E I  +PKL Y EA+    LQK  ST SCC
Sbjct: 70  NGTLPPGQERFDFEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCC 129

Query: 128 SICLADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPL 170
           SICLADYK  D++R+LPDC HLFH  CVDPWLRLHPTCPVCRTSP+P+P  TP+A+ VP 
Sbjct: 130 SICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPF 189

[Close]

BLAST of Cla97C01G014050 vs. TAIR10
Match: AT2G35910.1 (RING/U-box superfamily protein)

HSP 1 Score: 149.1 bits (375), Expect = 2.6e-36
Identity = 69/92 (75.00%), Postives = 78/92 (84.78%), Query Frame = 0


Query: 77  GLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDP 136
           GLD++TI SYPK+LYSEA   K  +TASCC+ICL DYK   +LR LPDC HLFHLKC+D 
Sbjct: 121 GLDEDTIQSYPKILYSEA---KGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDT 180

Query: 137 WLRLHPTCPVCRTSPIPTPLSTPLAEQVPLAS 169
           WLRL+PTCPVCRTSP+PTPLSTPLAE VPLAS
Sbjct: 181 WLRLNPTCPVCRTSPLPTPLSTPLAEVVPLAS 209

[Close]

BLAST of Cla97C01G014050 vs. TAIR10
Match: AT2G46160.1 (RING/U-box superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 3.6e-22
Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = 0


Query: 19  GFGXXXXXXXXXXXXXTTILLASYYCTRNG-LSSSVIQRTANRS-----------SPQAE 78
           GFG             +T+LL+SY C R+    ++ ++ T +R            + +  
Sbjct: 34  GFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFVAEEDN 93

Query: 79  EELEAVVVEIGLDQETITSYPKLLYSEAKLQKNDSTAS----------CCSICLADYKNS 138
           E+LEA  V +GLDQ  I SYPK  +S     K+ S AS           CSICL +YK +
Sbjct: 94  EDLEAGDVVVGLDQAVINSYPKFHFS-----KDTSAASSDGFGGGGDTTCSICLCEYKEA 153

Query: 139 DVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP 154
           ++LR++P+C H FHL C+D WL+L+ +CPVCR SP+P
Sbjct: 154 EMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLP 185

[Close]

BLAST of Cla97C01G014050 vs. TAIR10
Match: AT5G07040.1 (RING/U-box superfamily protein)

HSP 1 Score: 98.2 bits (243), Expect = 5.2e-21
Identity = 44/97 (45.36%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 71  AVVVEIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFH 130
           A  V++GLD+  I SYP+++  +++     +    CSICL DY+  + +R +P+C H FH
Sbjct: 60  AAEVKLGLDRPVIESYPRIVLGDSRRLPRPNNGP-CSICLCDYEAREPVRCIPECNHCFH 119

Query: 131 LKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLA 168
             CVD WLR   TCP+CR SP P+ L+TPL++ VPLA
Sbjct: 120 TDCVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]

BLAST of Cla97C01G014050 vs. TAIR10
Match: AT2G25410.1 (RING/U-box superfamily protein)

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-19
Identity = 44/118 (37.29%), Postives = 64/118 (54.24%), Query Frame = 0


Query: 36  TILLASYYCTRNGLSSSVIQRTANRSSPQAEEELEAVVVEIGLDQETITSYPKLLYSEAK 95
           T  +    C+   +SS + Q    R S     +    V  IGLD+ TI SY K+   E++
Sbjct: 257 TFCVGLVMCSSERVSSQIQQAVVARLSGSVTSQPSNEVARIGLDESTIESYKKVELGESR 316

Query: 96  LQKNDSTASCCSICLADYKNSDVLRLLPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIP 154
                S    C ICL++Y   + +R LP+C H FH +C+D WL+LH +CPVCR++P P
Sbjct: 317 RLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVCRSNPSP 374

The following BLAST results are available for this feature:

BLAST of Cla97C01G014050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462625.1	6.7e-75	93.60	PREDICTED: RING-H2 finger protein ATL70-like [Cucumis melo]	[more]
XP_004143342.1	8.7e-75	92.44	PREDICTED: RING-H2 finger protein ATL70-like [Cucumis sativus] >KGN48327.1 hypot...	[more]
XP_023544988.1	2.2e-70	88.37	RING-H2 finger protein ATL70-like [Cucurbita pepo subsp. pepo]	[more]
XP_022977896.1	2.9e-70	87.79	RING-H2 finger protein ATL70-like [Cucurbita maxima]	[more]
XP_022925965.1	6.5e-70	87.79	RING-H2 finger protein ATL70-like [Cucurbita moschata]	[more]

BLAST of Cla97C01G014050 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CHE9\|A0A1S3CHE9_CUCME	4.4e-75	93.60	RING-H2 finger protein ATL70-like OS=Cucumis melo OX=3656 GN=LOC103500941 PE=4 S...	[more]
tr\|A0A0A0KIW7\|A0A0A0KIW7_CUCSA	5.8e-75	92.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G476670 PE=4 SV=1	[more]
tr\|A0A1R3HFS8\|A0A1R3HFS8_COCAP	4.8e-53	71.93	Zinc finger, RING-type OS=Corchorus capsularis OX=210143 GN=CCACVL1_19612 PE=4 S...	[more]
tr\|A0A2R6RA30\|A0A2R6RA30_ACTCH	4.8e-53	63.91	RING-H2 finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00...	[more]
tr\|A0A2C9V811\|A0A2C9V811_MANES	1.8e-52	71.43	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G043600 PE=4 SV=...	[more]

BLAST of Cla97C01G014050 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FG21\|ATL71_ARATH	1.5e-38	49.18	Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 P...	[more]
sp\|Q8RX29\|ATL70_ARATH	4.6e-35	75.00	RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1	[more]
sp\|O82353\|ATL67_ARATH	6.5e-21	37.58	RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1	[more]
sp\|Q9FL42\|ATL69_ARATH	9.3e-20	45.36	Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana OX=3702 GN=ATL69 P...	[more]
sp\|Q9SKK8\|ATL22_ARATH	2.3e-18	37.29	RING-H2 finger protein ATL22 OS=Arabidopsis thaliana OX=3702 GN=ATL22 PE=2 SV=2	[more]

BLAST of Cla97C01G014050 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06490.1	8.5e-40	49.18	RING/U-box superfamily protein	[more]
AT2G35910.1	2.6e-36	75.00	RING/U-box superfamily protein	[more]
AT2G46160.1	3.6e-22	37.58	RING/U-box superfamily protein	[more]
AT5G07040.1	5.2e-21	45.36	RING/U-box superfamily protein	[more]
AT2G25410.1	1.3e-19	37.29	RING/U-box superfamily protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0008150	biological_process
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G014050.1	Cla97C01G014050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 106..147 e-value: 1.9E-7 score: 40.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 105..148 e-value: 7.7E-13 score: 48.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 106..148 score: 12.873
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 54..152 e-value: 1.4E-21 score: 77.9
None	No IPR available	PANTHER	PTHR14155:SF279	SUBFAMILY NOT NAMED	coord: 7..164
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 7..164
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 105..148 e-value: 4.02361E-19 score: 75.8013
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 82..153

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G014050	Cla008404	Watermelon (97103) v1	wmwmbB244
Cla97C01G014050	Csa6G476670	Cucumber (Chinese Long) v2	cuwmbB413
Cla97C01G014050	MELO3C024590	Melon (DHL92) v3.5.1	mewmbB516
Cla97C01G014050	ClCG01G015050	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G014050	CSPI06G26130	Wild cucumber (PI 183967)	cpiwmbB434
Cla97C01G014050	Cucsa.083830	Cucumber (Gy14) v1	cgywmbB082
Cla97C01G014050	CmaCh07G008210	Cucurbita maxima (Rimu)	cmawmbB875
Cla97C01G014050	CmoCh03G011060	Cucurbita moschata (Rifu)	cmowmbB642
Cla97C01G014050	CmoCh07G008490	Cucurbita moschata (Rifu)	cmowmbB849
Cla97C01G014050	Lsi01G011800	Bottle gourd (USVL1VR-Ls)	lsiwmbB115
Cla97C01G014050	CsGy6G025510	Cucumber (Gy14) v2	cgybwmbB394
Cla97C01G014050	MELO3C024590.2	Melon (DHL92) v3.6.1	medwmbB508
Cla97C01G014050	Carg10515	Silver-seed gourd	carwmbB0239
Cla97C01G014050	Carg05332	Silver-seed gourd	carwmbB0839
Cla97C01G014050	CsaV3_6G041160	Cucumber (Chinese Long) v3	cucwmbB430
Cla97C01G014050	Bhi03G001373	Wax gourd	wgowmbB404

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G014050	Cucurbita maxima (Rimu)	cmawmbB670
Cla97C01G014050	Wild cucumber (PI 183967)	cpiwmbB433
Cla97C01G014050	Cucumber (Chinese Long) v2	cuwmbB412
Cla97C01G014050	Wax gourd	wgowmbB399