ClCG01G006290 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G006290
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Senescence-associated protein, putative
Location	CG_Chr01 : 7002127 .. 7003900 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGAGTAGCGGATTTCGAATCCTTCAACGACACGGAAATTAAGAGCGATGAAAAATAATTAAAAACATATTTTGGTTGTTCGTTTCACAGCCCCAAACCAAACCCTAACCCTAATTTTGCTTCTTCATCAATTTCATTTAAATACCCCCCACCACCCTCCTCTTCTTCCTCATTCGCTAACCATTCTCAATTTTCAATTTTTCCTCCATTATTTACCTTCTCTGGCTCTTTCTTGAAGATTTCATTCCATCCCCTTTTCTCTTGCCGTCTCTTTGACTTTAGAGCCCCTTCCAGTCCGACGATCCTGTCTCAGTTTTTCTTTTACTGTCATCTTTTTCTTTTCATCCGCCGAAATAGATCAGAGAATTTTTGAAAGAGTTGTGAATGGTGGAAGAAAATTCCAGTAGTAGTAATTACATGCGCTCCCTTTTGGATTCAAGGGCGAGCGCTCGTCTTCCTCTTTCTGCTGCTTCTTCTTTCGCTTTTGGTTCTTGCAAGGAAGGCTGGTACTACCGCTGCCTTGGAGTTGACCCTTGAGAGATCTCTTTATTTCCCTCAACCCCATTACGAGGAATTTTTATTTTTTTGTTCTCAAAAACTTTTTGCGATTTTTCTCTTTCGATTTTTTGATCGCGGCGTTAGCTTCGCTAAATTTATCGGGGCTGTCGTCGATTGCCGATTCTCTGTTTCGGATATAATTTGAAGGAAAAAAAAAAGAAGGGATTGGGATTTTGAATTTGATATTTTATTTTACGAAGATGTTGCTGTATAAGCAGAAGAAGAATCAGAATGTTAAGGGCAACAGGCTCTTGATCAGCATCAATGTCCTCGGCAGTGCTGGTCCGATTCGATTTATTGTCAACGAGGAGCAACTTGTTGCTGCTGTTATTGATACCGCGTTGAAATCCTACGCGCGTGAGGGTCGGCTGCCGATTCTTGGGTCCGATCTTAAAGATTTTCAGCTTTACTGCCCAAATGCGGGACCAGATGGTAATTCAATCAAACTTTATCTTTTTTGATAATTCAAGAACGTGTTTTGTAACAATTTTTCCTTTACAATCATTTTGCATGTCTCAAATCTGAAATAGCTGGAGAACATTGTTATGTTATTCATAAATTTGTTACCTCTATCTCAATTTCCTTTCTTAATTTTTTTGATGGAGATCTCTGTTCTGGGATTTGTTTTGTGTTGGGATCTCTGTTCCTATATTGAGAATCTTCTGATCACAATAGGAAAAAACAATCCTTTGTTTCCTATCTGTTTCCTATCTGGGGTTTCGTTTTTCTCATGATGTTTGTAAATTTTTCTGCAGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCACGTTGTGCAAGAAACCACAGGCAGAGAAAGTGGCAGAAGATGGAAAATCTTCACCAGAGCCAAACATCCCTCGCAAAGGCGCAGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATTTGAAAATTTATTCCCATTGAATCCTCACGGCCACATGACGATAAGTGATCGCTATGAATTAGGTTGGTTTTAGTTGTTATTTGGGTGAGTTGTTGTGGACCTTGGCAATTTGGTTTTTCTTTGCTCTTGTTGTAGTCTTGTCGGACCCATGTTTCAACTTTTCAAAAAGTTGGGTGGTGGGTTCCCCTTTTCTCTTGAAATAAACAGTGTACTTCTTAGAATTTATCCCTTTCAAATAAATTACATCTTAGTTTTTCATCTGCCATGTATTGTTCATGTGGGTATGTTTCTG

mRNA sequence

GAGGAGTAGCGGATTTCGAATCCTTCAACGACACGGAAATTAAGAGCGATGAAAAATAATTAAAAACATATTTTGGTTGTTCGTTTCACAGCCCCAAACCAAACCCTAACCCTAATTTTGCTTCTTCATCAATTTCATTTAAATACCCCCCACCACCCTCCTCTTCTTCCTCATTCGCTAACCATTCTCAATTTTCAATTTTTCCTCCATTATTTACCTTCTCTGGCTCTTTCTTGAAGATTTCATTCCATCCCCTTTTCTCTTGCCGTCTCTTTGACTTTAGAGCCCCTTCCAGTCCGACGATCCTGTCTCAGTTTTTCTTTTACTGTCATCTTTTTCTTTTCATCCGCCGAAATAGATCAGAGAATTTTTGAAAGAGTTGTGAATGGTGGAAGAAAATTCCAGTAGTAGTAATTACATGCGCTCCCTTTTGGATTCAAGGGCGAGCGCTCGTCTTCCTCTTTCTGCTGCTTCTTCTTTCGCTTTTGGTTCTTGCAAGGAAGGCTGGTACTACCGCTGCCTTGGAGTTGACCCTTGAGAGATCTCTTTATTTCCCTCAACCCCATTACGAGGAATTTTTATTTTTTTGTTCTCAAAAACTTTTTGCGATTTTTCTCTTTCGATTTTTTGATCGCGGCGTTAGCTTCGCTAAATTTATCGGGGCTGTCGTCGATTGCCGATTCTCTGTTTCGGATATAATTTGAAGGAAAAAAAAAAGAAGGGATTGGGATTTTGAATTTGATATTTTATTTTACGAAGATGTTGCTGTATAAGCAGAAGAAGAATCAGAATGTTAAGGGCAACAGGCTCTTGATCAGCATCAATGTCCTCGGCAGTGCTGGTCCGATTCGATTTATTGTCAACGAGGAGCAACTTGTTGCTGCTGTTATTGATACCGCGTTGAAATCCTACGCGCGTGAGGGTCGGCTGCCGATTCTTGGGTCCGATCTTAAAGATTTTCAGCTTTACTGCCCAAATGCGGGACCAGATGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCACGTTGTGCAAGAAACCACAGGCAGAGAAAGTGGCAGAAGATGGAAAATCTTCACCAGAGCCAAACATCCCTCGCAAAGGCGCAGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATTTGAAAATTTATTCCCATTGAATCCTCACGGCCACATGACGATAAGTGATCGCTATGAATTAGGTTGGTTTTAGTTGTTATTTGGGTGAGTTGTTGTGGACCTTGGCAATTTGGTTTTTCTTTGCTCTTGTTGTAGTCTTGTCGGACCCATGTTTCAACTTTTCAAAAAGTTGGGTGGTGGGTTCCCCTTTTCTCTTGAAATAAACAGTGTACTTCTTAGAATTTATCCCTTTCAAATAAATTACATCTTAGTTTTTCATCTGCCATGTATTGTTCATGTGGGTATGTTTCTG

Coding sequence (CDS)

ATGTTGCTGTATAAGCAGAAGAAGAATCAGAATGTTAAGGGCAACAGGCTCTTGATCAGCATCAATGTCCTCGGCAGTGCTGGTCCGATTCGATTTATTGTCAACGAGGAGCAACTTGTTGCTGCTGTTATTGATACCGCGTTGAAATCCTACGCGCGTGAGGGTCGGCTGCCGATTCTTGGGTCCGATCTTAAAGATTTTCAGCTTTACTGCCCAAATGCGGGACCAGATGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCACGTTGTGCAAGAAACCACAGGCAGAGAAAGTGGCAGAAGATGGAAAATCTTCACCAGAGCCAAACATCCCTCGCAAAGGCGCAGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATTTGAAAATTTATTCCCATTGA

Protein sequence

MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPILGSDLKDFQLYCPNAGPDALSPWDTIGSHGARNFTLCKKPQAEKVAEDGKSSPEPNIPRKGAGSWKSWINKSLNLKIYSH

Homology

[Close]

BLAST of ClCG01G006290 vs. TrEMBL
Match: A0A0A0KUW8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G569870 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 9.7e-67
Identity = 127/139 (91.37%), Postives = 130/139 (93.53%), Query Frame = 1


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 61  GSDLKDFQLYCPNAGPDALSPWDTIGSHGARNFTLCKKPQAEKVAEDGKSSPEPNIPRKG 120
           GSDL+DFQLYCPN GPDALSPWDTIGSHGARNF LCKKPQ EKV E+GK+   P IPRK 
Sbjct: 61  GSDLRDFQLYCPNTGPDALSPWDTIGSHGARNFMLCKKPQPEKVPEEGKTPSGPAIPRKS 120

Query: 121 AGSWKSWINKSLNLKIYSH 140
           AGSWKSWINKSLNLKIYSH
Sbjct: 121 AGSWKSWINKSLNLKIYSH 139

[Close]

BLAST of ClCG01G006290 vs. TrEMBL
Match: M5XHL6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013143mg PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 6.5e-55
Identity = 112/140 (80.00%), Postives = 119/140 (85.00%), Query Frame = 1


Query: 1   MLLYKQKKNQN-VKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPI 60
           MLLYKQKKN N  KGNRLLISI VLGSAGPIRF+VNEE+LVAAVIDTALKSYAREGRLP+
Sbjct: 1   MLLYKQKKNPNSAKGNRLLISITVLGSAGPIRFVVNEEELVAAVIDTALKSYAREGRLPV 60

Query: 61  LGSDLKDFQLYCPNAGPDALSPWDTIGSHGARNFTLCKKPQAEKVAEDGKSSPEPNIPRK 120
           LGSDL DF LYCPNAGPDALSPWDTIG+ GARNF LCKKPQ  K+  D    P   I RK
Sbjct: 61  LGSDLNDFLLYCPNAGPDALSPWDTIGAQGARNFMLCKKPQPVKM--DSDEIPAAAITRK 120

Query: 121 GAGSWKSWINKSLNLKIYSH 140
           G+GSWK+WINKSLNLKI SH
Sbjct: 121 GSGSWKAWINKSLNLKISSH 138

[Close]

BLAST of ClCG01G006290 vs. TrEMBL
Match: A0A059D744_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02935 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.1e-54
Identity = 108/139 (77.70%), Postives = 120/139 (86.33%), Query Frame = 1


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQ+ KGNRLLISINVLGSAGPIRF+V EE+LVAAVIDTALKSYAREGRLP+L
Sbjct: 1   MLLYKQKKNQSAKGNRLLISINVLGSAGPIRFVVGEEELVAAVIDTALKSYAREGRLPVL 60

Query: 61  GSDLKDFQLYCPNAGPDALSPWDTIGSHGARNFTLCKKPQAEKVAEDGKSSPEPNIPRKG 120
           GSDL DF LYCP +G DALSPWD IGS GARNF LCKKP+ + VA+D + SP+  I RKG
Sbjct: 61  GSDLNDFLLYCPTSGSDALSPWDMIGSPGARNFLLCKKPKTDVVADD-RRSPDAGIARKG 120

Query: 121 AGSWKSWINKSLNLKIYSH 140
            GSWKSWINKS +LK+ SH
Sbjct: 121 NGSWKSWINKSFSLKVSSH 138

[Close]

BLAST of ClCG01G006290 vs. TrEMBL
Match: A0A0B0NPI3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_02623 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.5e-54
Identity = 107/139 (76.98%), Postives = 122/139 (87.77%), Query Frame = 1


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQ  KGNRLLIS+ VLGSAGPIRF+VNEE+LVAAVIDTALKSYAREGRLP+L
Sbjct: 1   MLLYKQKKNQGPKGNRLLISVTVLGSAGPIRFVVNEEELVAAVIDTALKSYAREGRLPVL 60

Query: 61  GSDLKDFQLYCPNAGPDALSPWDTIGSHGARNFTLCKKPQAEKVAEDGKSSPEPNIPRKG 120
           GS+L DF LYCP+AG DALSPW+TIGS GARNF LCKKP+ EKV +DGK++   +I RK 
Sbjct: 61  GSNLNDFLLYCPSAGSDALSPWETIGSQGARNFMLCKKPRTEKVKDDGKAA--ESINRKA 120

Query: 121 AGSWKSWINKSLNLKIYSH 140
           +G+WK+W NKSLNLKI SH
Sbjct: 121 SGNWKAWFNKSLNLKISSH 137

[Close]

BLAST of ClCG01G006290 vs. TrEMBL
Match: A0A0D2QER4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G177100 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 5.5e-54
Identity = 106/139 (76.26%), Postives = 122/139 (87.77%), Query Frame = 1


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYKQKK+Q  KGNRLLIS+ VLGSAGPIRF+VNEE+LVAAVIDTALKSYAREGRLP+L
Sbjct: 1   MLLYKQKKSQGPKGNRLLISVTVLGSAGPIRFVVNEEELVAAVIDTALKSYAREGRLPVL 60

Query: 61  GSDLKDFQLYCPNAGPDALSPWDTIGSHGARNFTLCKKPQAEKVAEDGKSSPEPNIPRKG 120
           GS+L DF LYCP+AG DALSPW+TIGS GARNF LCKKP+ EKV +DGK++   +I RK 
Sbjct: 61  GSNLNDFLLYCPSAGSDALSPWETIGSQGARNFMLCKKPRTEKVKDDGKAA--ESINRKA 120

Query: 121 AGSWKSWINKSLNLKIYSH 140
           +G+WK+W NKSLNLKI SH
Sbjct: 121 SGNWKAWFNKSLNLKISSH 137

[Close]

BLAST of ClCG01G006290 vs. TAIR10
Match: AT1G70780.1 (AT1G70780.1 unknown protein)

HSP 1 Score: 190.3 bits (482), Expect = 8.1e-49
Identity = 98/141 (69.50%), Postives = 111/141 (78.72%), Query Frame = 1


Query: 1   MLLY-KQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPI 60
           MLLY KQKKNQN KGNR+LIS+ VLGSAGPIRF+  E+ LVA+VIDTALK YAREGRLP+
Sbjct: 1   MLLYNKQKKNQNAKGNRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPL 60

Query: 61  LGSDLKDFQLYCPNAGPDALSPWDTIGSHGARNFTLCKKPQAEKVAE-DGKSSPEPNIPR 120
           LGSD  DF LYCP  GP+ALS WD IGS GARNF LC+KP+ +KV E +G+S    N  R
Sbjct: 61  LGSDFNDFLLYCPMVGPEALSTWDAIGSLGARNFMLCRKPEEKKVEESNGRSDSTINGAR 120

Query: 121 KGAGSWKSWINKSLNLKIYSH 140
           KG GS K+WINKS NLK+ SH
Sbjct: 121 KG-GSLKAWINKSFNLKVSSH 140

[Close]

BLAST of ClCG01G006290 vs. TAIR10
Match: AT1G23150.1 (AT1G23150.1 unknown protein)

HSP 1 Score: 182.2 bits (461), Expect = 2.2e-46
Identity = 98/142 (69.01%), Postives = 109/142 (76.76%), Query Frame = 1


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYK KKNQ VKGNR+LIS+  LGSAGPIRF+ NE  LVA+VIDTALK YAREGRLPIL
Sbjct: 1   MLLYK-KKNQIVKGNRILISVTFLGSAGPIRFVANEGDLVASVIDTALKCYAREGRLPIL 60

Query: 61  GSDLKDFQLYCPNAGPDALSPWDTIGSHGARNFTLC-KKPQAEKVAED-GKSSPEPNIPR 120
           GSD  DF  YCP  GP ALSPW+ IGS G RNF LC KKP+ +KV ED G+S+   N  R
Sbjct: 61  GSDFNDFVFYCPMVGPGALSPWEAIGSVGVRNFMLCKKKPEEKKVEEDKGRSNFPINGAR 120

Query: 121 KGA-GSWKSWINKSLNLKIYSH 140
           KGA GS+K+WINKSL LK+ +H
Sbjct: 121 KGAGGSFKAWINKSLRLKVTTH 141

[Close]

BLAST of ClCG01G006290 vs. TAIR10
Match: AT5G37730.1 (AT5G37730.1 unknown protein)

HSP 1 Score: 100.9 bits (250), Expect = 6.5e-22
Identity = 49/97 (50.52%), Postives = 66/97 (68.04%), Query Frame = 1


Query: 8  KNQNVKG------NRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPILG 67
          +N+NVKG       +LL+S+NVLGS GPIRF+ NE+  V++ I+T LK+YAR+GR+P+LG
Sbjct: 3  RNENVKGVMKRKNKKLLVSVNVLGSVGPIRFLANEDDEVSSAINTTLKAYARQGRIPVLG 62

Query: 68 SDLKDFQLYCPNAGPDALSPWDTIGSHGARNFTLCKK 99
           D+ +F  Y  NAG + L P + IGS    NF +CKK
Sbjct: 63 FDVDNFIFYSINAGFNTLHPQEKIGSMDVTNFLMCKK 99

[Close]

BLAST of ClCG01G006290 vs. TAIR10
Match: AT2G01554.1 (AT2G01554.1 unknown protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.2e-07
Identity = 46/141 (32.62%), Postives = 60/141 (42.55%), Query Frame = 1


Query: 2   LLYKQKKNQNVKG---NRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLP 61
           +LY  K  +N K    NR L+SINVLGSAG   F    +Q+ A     AL        +P
Sbjct: 1   MLYNNKHQRNQKSKTTNRFLVSINVLGSAG-FHF---SDQIPAFSDFIALT-------VP 60

Query: 62  ILGSDLKDFQLYCPNAGPDALSPWDTIGSHGARNFTLCKKPQAEKVAEDGKSSPEPNIPR 121
           + G                       IGS G+RNF L  K + + + +   S       R
Sbjct: 61  LKGK----------------------IGSTGSRNFVLSNKLETQNLED---SMMTTTTTR 105

Query: 122 KGAGSWKSWINKSLNLKIYSH 140
           K +G WK+W+NKS  L + SH
Sbjct: 121 KTSGRWKAWLNKSFGLMVPSH 105

[Close]

BLAST of ClCG01G006290 vs. TAIR10
Match: AT2G27830.1 (AT2G27830.1 unknown protein)

HSP 1 Score: 51.2 bits (121), Expect = 5.9e-07
Identity = 30/97 (30.93%), Postives = 51/97 (52.58%), Query Frame = 1


Query: 16  RLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL-GSDLKDFQLYCPNA 75
           +LL+++ V GS G ++ I++ E  V+ +ID A++ Y +E R P L  S+   F L+    
Sbjct: 71  KLLLNVTVQGSLGAVQIIISPESTVSDLIDAAVRQYVKEARRPFLPESEPSRFDLHYSQF 130

Query: 76  GPDALSPWDTIGSHGARNFTLCKKPQAEKVAEDGKSS 112
             +++   + + S G+RNF LC + +       G SS
Sbjct: 131 SLESIVRDEKLISLGSRNFFLCGRKETGGFIGCGLSS 167

[Close]

BLAST of ClCG01G006290 vs. NCBI nr
Match: gi|659072856|ref|XP_008467130.1| (PREDICTED: uncharacterized protein LOC103504558 [Cucumis melo])

HSP 1 Score: 266.5 bits (680), Expect = 2.5e-68
Identity = 129/139 (92.81%), Postives = 132/139 (94.96%), Query Frame = 1


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 61  GSDLKDFQLYCPNAGPDALSPWDTIGSHGARNFTLCKKPQAEKVAEDGKSSPEPNIPRKG 120
           GSDL+DFQLYCPN GPDALSPWDTIGSHGARNF LCKKPQ EKV+E+GKS P P IPRK 
Sbjct: 61  GSDLRDFQLYCPNTGPDALSPWDTIGSHGARNFMLCKKPQPEKVSEEGKSPPGPTIPRKS 120

Query: 121 AGSWKSWINKSLNLKIYSH 140
           AGSWKSWINKSLNLKIYSH
Sbjct: 121 AGSWKSWINKSLNLKIYSH 139

[Close]

BLAST of ClCG01G006290 vs. NCBI nr
Match: gi|449465759|ref|XP_004150595.1| (PREDICTED: uncharacterized protein At4g22758-like [Cucumis sativus])

HSP 1 Score: 260.8 bits (665), Expect = 1.4e-66
Identity = 127/139 (91.37%), Postives = 130/139 (93.53%), Query Frame = 1


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 61  GSDLKDFQLYCPNAGPDALSPWDTIGSHGARNFTLCKKPQAEKVAEDGKSSPEPNIPRKG 120
           GSDL+DFQLYCPN GPDALSPWDTIGSHGARNF LCKKPQ EKV E+GK+   P IPRK 
Sbjct: 61  GSDLRDFQLYCPNTGPDALSPWDTIGSHGARNFMLCKKPQPEKVPEEGKTPSGPAIPRKS 120

Query: 121 AGSWKSWINKSLNLKIYSH 140
           AGSWKSWINKSLNLKIYSH
Sbjct: 121 AGSWKSWINKSLNLKIYSH 139

[Close]

BLAST of ClCG01G006290 vs. NCBI nr
Match: gi|596205660|ref|XP_007223777.1| (hypothetical protein PRUPE_ppa013143mg [Prunus persica])

HSP 1 Score: 221.5 bits (563), Expect = 9.3e-55
Identity = 112/140 (80.00%), Postives = 119/140 (85.00%), Query Frame = 1


Query: 1   MLLYKQKKNQN-VKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPI 60
           MLLYKQKKN N  KGNRLLISI VLGSAGPIRF+VNEE+LVAAVIDTALKSYAREGRLP+
Sbjct: 1   MLLYKQKKNPNSAKGNRLLISITVLGSAGPIRFVVNEEELVAAVIDTALKSYAREGRLPV 60

Query: 61  LGSDLKDFQLYCPNAGPDALSPWDTIGSHGARNFTLCKKPQAEKVAEDGKSSPEPNIPRK 120
           LGSDL DF LYCPNAGPDALSPWDTIG+ GARNF LCKKPQ  K+  D    P   I RK
Sbjct: 61  LGSDLNDFLLYCPNAGPDALSPWDTIGAQGARNFMLCKKPQPVKM--DSDEIPAAAITRK 120

Query: 121 GAGSWKSWINKSLNLKIYSH 140
           G+GSWK+WINKSLNLKI SH
Sbjct: 121 GSGSWKAWINKSLNLKISSH 138

[Close]

BLAST of ClCG01G006290 vs. NCBI nr
Match: gi|702274976|ref|XP_010044204.1| (PREDICTED: uncharacterized protein At4g22758 [Eucalyptus grandis])

HSP 1 Score: 220.7 bits (561), Expect = 1.6e-54
Identity = 108/139 (77.70%), Postives = 120/139 (86.33%), Query Frame = 1


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQ+ KGNRLLISINVLGSAGPIRF+V EE+LVAAVIDTALKSYAREGRLP+L
Sbjct: 1   MLLYKQKKNQSAKGNRLLISINVLGSAGPIRFVVGEEELVAAVIDTALKSYAREGRLPVL 60

Query: 61  GSDLKDFQLYCPNAGPDALSPWDTIGSHGARNFTLCKKPQAEKVAEDGKSSPEPNIPRKG 120
           GSDL DF LYCP +G DALSPWD IGS GARNF LCKKP+ + VA+D + SP+  I RKG
Sbjct: 61  GSDLNDFLLYCPTSGSDALSPWDMIGSPGARNFLLCKKPKTDVVADD-RRSPDAGIARKG 120

Query: 121 AGSWKSWINKSLNLKIYSH 140
            GSWKSWINKS +LK+ SH
Sbjct: 121 NGSWKSWINKSFSLKVSSH 138

[Close]

BLAST of ClCG01G006290 vs. NCBI nr
Match: gi|728835292|gb|KHG14735.1| (hypothetical protein F383_02623 [Gossypium arboreum])

HSP 1 Score: 220.3 bits (560), Expect = 2.1e-54
Identity = 107/139 (76.98%), Postives = 122/139 (87.77%), Query Frame = 1


Query: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQ  KGNRLLIS+ VLGSAGPIRF+VNEE+LVAAVIDTALKSYAREGRLP+L
Sbjct: 1   MLLYKQKKNQGPKGNRLLISVTVLGSAGPIRFVVNEEELVAAVIDTALKSYAREGRLPVL 60

Query: 61  GSDLKDFQLYCPNAGPDALSPWDTIGSHGARNFTLCKKPQAEKVAEDGKSSPEPNIPRKG 120
           GS+L DF LYCP+AG DALSPW+TIGS GARNF LCKKP+ EKV +DGK++   +I RK 
Sbjct: 61  GSNLNDFLLYCPSAGSDALSPWETIGSQGARNFMLCKKPRTEKVKDDGKAA--ESINRKA 120

Query: 121 AGSWKSWINKSLNLKIYSH 140
           +G+WK+W NKSLNLKI SH
Sbjct: 121 SGNWKAWFNKSLNLKISSH 137

The following BLAST results are available for this feature:

BLAST of ClCG01G006290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUW8_CUCSA	9.7e-67	91.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G569870 PE=4 SV=1	[more]
M5XHL6_PRUPE	6.5e-55	80.00	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013143mg PE=4 SV=1	[more]
A0A059D744_EUCGR	1.1e-54	77.70	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02935 PE=4 SV=1	[more]
A0A0B0NPI3_GOSAR	1.5e-54	76.98	Uncharacterized protein OS=Gossypium arboreum GN=F383_02623 PE=4 SV=1	[more]
A0A0D2QER4_GOSRA	5.5e-54	76.26	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G177100 PE=4 SV=1	[more]

BLAST of ClCG01G006290 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70780.1	8.1e-49	69.50	unknown protein	[more]
AT1G23150.1	2.2e-46	69.01	unknown protein	[more]
AT5G37730.1	6.5e-22	50.52	unknown protein	[more]
AT2G01554.1	1.2e-07	32.62	unknown protein	[more]
AT2G27830.1	5.9e-07	30.93	unknown protein	[more]

BLAST of ClCG01G006290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072856\|ref\|XP_008467130.1\|	2.5e-68	92.81	PREDICTED: uncharacterized protein LOC103504558 [Cucumis melo]	[more]
gi\|449465759\|ref\|XP_004150595.1\|	1.4e-66	91.37	PREDICTED: uncharacterized protein At4g22758-like [Cucumis sativus]	[more]
gi\|596205660\|ref\|XP_007223777.1\|	9.3e-55	80.00	hypothetical protein PRUPE_ppa013143mg [Prunus persica]	[more]
gi\|702274976\|ref\|XP_010044204.1\|	1.6e-54	77.70	PREDICTED: uncharacterized protein At4g22758 [Eucalyptus grandis]	[more]
gi\|728835292\|gb\|KHG14735.1\|	2.1e-54	76.98	hypothetical protein F383_02623 [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G006290.1	ClCG01G006290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33270	FAMILY NOT NAMED	coord: 1..139 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G006290	Csa5G569870	Cucumber (Chinese Long) v2	cuwcgB372
ClCG01G006290	MELO3C005301	Melon (DHL92) v3.5.1	mewcgB019
ClCG01G006290	Cla003930	Watermelon (97103) v1	wcgwmB143
ClCG01G006290	Cla97C01G006600	Watermelon (97103) v2	wcgwmbB089
ClCG01G006290	Bhi12G000788	Wax gourd	wcgwgoB191
ClCG01G006290	CSPI05G19530	Wild cucumber (PI 183967)	cpiwcgB388
ClCG01G006290	Cucsa.280330	Cucumber (Gy14) v1	cgywcgB484
ClCG01G006290	CmaCh04G021250	Cucurbita maxima (Rimu)	cmawcgB638
ClCG01G006290	CmoCh04G022220	Cucurbita moschata (Rifu)	cmowcgB640
ClCG01G006290	CmoCh15G009980	Cucurbita moschata (Rifu)	cmowcgB245
ClCG01G006290	Lsi09G006640	Bottle gourd (USVL1VR-Ls)	lsiwcgB008
ClCG01G006290	Cp4.1LG01g18480	Cucurbita pepo (Zucchini)	cpewcgB373
ClCG01G006290	Cp4.1LG13g03650	Cucurbita pepo (Zucchini)	cpewcgB169
ClCG01G006290	CsGy5G019040	Cucumber (Gy14) v2	cgybwcgB340
ClCG01G006290	MELO3C005301.2	Melon (DHL92) v3.6.1	medwcgB017
ClCG01G006290	Carg26340	Silver-seed gourd	carwcgB0183
ClCG01G006290	Carg25239	Silver-seed gourd	carwcgB0857
ClCG01G006290	CsaV3_5G028370	Cucumber (Chinese Long) v3	cucwcgB394

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G006290	Cucurbita pepo (Zucchini)	cpewcgB370
ClCG01G006290	Cucurbita pepo (Zucchini)	cpewcgB371
ClCG01G006290	Cucumber (Gy14) v2	cgybwcgB336
ClCG01G006290	Silver-seed gourd	carwcgB0170
ClCG01G006290	Silver-seed gourd	carwcgB0419
ClCG01G006290	Cucumber (Chinese Long) v3	cucwcgB389
ClCG01G006290	Watermelon (97103) v2	wcgwmbB120
ClCG01G006290	Cucurbita moschata (Rifu)	cmowcgB638
ClCG01G006290	Cucurbita maxima (Rimu)	cmawcgB257
ClCG01G006290	Cucurbita maxima (Rimu)	cmawcgB634
ClCG01G006290	Cucurbita maxima (Rimu)	cmawcgB636
ClCG01G006290	Cucurbita moschata (Rifu)	cmowcgB636