Carg26340 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26340
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Senescence-associated protein
Location	Cucurbita_argyrosperma_scaffold_237 : 116480 .. 118260 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCTGCTGCTTCTTCTTTCGCTTTTGGTTCTTGCAAGGAAGGCTGGTACTACCGCTGCCTCGGAGTTGACCCTTGAGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGTTTCTCTACCTTCTTCTCGATACAACTCCGTTTCAAGGAATTTTAACATTTTGTTCTCAAAACTTTTTTGCGATTTCTCTCTTTCGATTTTTTCGTTGCGGCGCTAGCTTTGGGAAATTTGTCGAGGTTGTCGTCGGTGGCCGATTCTCTGTTTCTGGGGTATAATTTGAAGAAATATAAGAAGGGATTCGGATTGGTGGGATTTTGAATTTGGATTTGGATTTGGATTTCAGTTTCAATTTTCTTACGAGGATGTTGCTGTACAAGCAGAAGAAGAATCAGAATGTTAAGGGCAACAGGCTCTTGATCAGCGTCAATGTGCTCGGCAGCGCTGGGCCGATTCGATTTATTGTGAACGAGGAGCAACTTGTTGCTGCTGTTATTGATACAGCATTGAAATCCTACGCGCGTGAGGGCCGGCTTCCGATTCTTGGGTCCGATCTCAGGGATTTCCAGCTTTACTGCCCAATTGCTGGACCAGATGGTAATTTAAACCCTGTTTTTATACAATTCAATCGTGTTTCGTGATAATTATCCTTTTCAATACTTTTGCATGCTTCCAATATGAAGTGGCTGAAGAAATTTGTGATGCGATTCATAAATTTGTTCTCTATTTCAATTTCGTGTCTTAATTTTGTGATGGAAATCTCTGTTCTGGGGGCTCCCCCCCCTTAAAATATTGTTTATTGGTATTGTGTTGGGATCTCTGTTTCCTTTCTCTAGAATCCTCTGATAACAATATTAAAACAAATCTGGGATTTGGTTTTCTCATGTGGTTTTGAAATTTTTCTGCAGCCTTGAGTCCATGGGACACAATTGGATCGCACGGATCCCGGAACTTCATGTTGTGCAAGAAACCACAGCCAGAGAAAGTGGGAGAACATGGAAATTCGCCACCGGAGCCAAGTATCCCCCGCAAAGGCACAGGAAGCTGGAAGTCATGGATCAACAAGTCTCTGAATATGAAAATCTATTCCCATTGAATCCGCGCGACAACGATGATAATGATGGTTGAATGCTCCATGGAAATTAGGTTGGTTTTAGTTGTTGTTACTTGGGTCAGTTGTTGTGTGGACCATTGCAATTTGGTTTTTATCGCTTTTGTTTGTTGTCTTGTCGGACACCGTGTTTCAACTATCATAAAGTTGGGTGGGTTCCCCGTTTTTCTTCTGGAAATAAACAGTGTAATCCATAGAATTTATCCCTTTCAAATAAATTACATCTTGGATTTTTAATTGCCACGCATTGTTCATGTTGCTAAGTTTCTGGAAAGAAGAAGAAAAAGGCTGTATGCTTTATTCTTTATGCTTTATGCTTTGAACTCTTGATATTCGGTTTGTGTGGTTGATCATGGATTTGGCTGAATCTTGTTTTATCATCAATCTGATTGGGTCAGAGTATAATAGTTTAGGAGGTGTGTGGGTAAGTGTGATTTGACTATATGAAACTTGAAGCTTCGTATGATAGGGACCTGATTGTGTGATCTTTTCCCTTTGCCCTTTTTCCTTCTCTGTTTCGTTCAACTCTGCTGGATTTTTCTTACACAAGTTCAATTTTTGTCAATCAAATTGCTGTTATGGGTATTTCATCATATTTGTTTTCTGGGTCTGACCCCTTTTTCTTTTCTTTTTTGAAGGGAAACCAAATTTATATATATATGTTTAG

mRNA sequence

CTTTCTGCTGCTTCTTCTTTCGCTTTTGGTTCTTGCAAGGAAGGCTGGTACTACCGCTGCCTCGGAGTTGACCCTTGAGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGTTTCTCTACCTTCTTCTCGATACAACTCCGTTTCAAGGAATTTTAACATTTTGTTCTCAAAACTTTTTTGCGATTTCTCTCTTTCGATTTTTTCGTTGCGGCGCTAGCTTTGGGAAATTTGTCGAGGTTGTCGTCGGTGGCCGATTCTCTGTTTCTGGGGTATAATTTGAAGAAATATAAGAAGGGATTCGGATTGGTGGGATTTTGAATTTGGATTTGGATTTGGATTTCAGTTTCAATTTTCTTACGAGGATGTTGCTGTACAAGCAGAAGAAGAATCAGAATGTTAAGGGCAACAGGCTCTTGATCAGCGTCAATGTGCTCGGCAGCGCTGGGCCGATTCGATTTATTGTGAACGAGGAGCAACTTGTTGCTGCTGTTATTGATACAGCATTGAAATCCTACGCGCGTGAGGGCCGGCTTCCGATTCTTGGGTCCGATCTCAGGGATTTCCAGCTTTACTGCCCAATTGCTGGACCAGATGCCTTGAGTCCATGGGACACAATTGGATCGCACGGATCCCGGAACTTCATGTTGTGCAAGAAACCACAGCCAGAGAAAGTGGGAGAACATGGAAATTCGCCACCGGAGCCAAGTATCCCCCGCAAAGGCACAGGAAGCTGGAAGTCATGGATCAACAAGTCTCTGAATATGAAAATCTATTCCCATTGAATCCGCGCGACAACGATGATAATGATGGTTGAATGCTCCATGGAAATTAGGTTGGTTTTAGTTGTTGTTACTTGGGTCAGTTGTTGTGTGGACCATTGCAATTTGGTTTTTATCGCTTTTGTTTGTTGTCTTGTCGGACACCGTGTTTCAACTATCATAAAGTTGGGTGGGTTCCCCGTTTTTCTTCTGGAAATAAACAGTGTAATCCATAGAATTTATCCCTTTCAAATAAATTACATCTTGGATTTTTAATTGCCACGCATTGTTCATGTTGCTAAGTTTCTGGAAAGAAGAAGAAAAAGGCTGTATGCTTTATTCTTTATGCTTTATGCTTTGAACTCTTGATATTCGGTTTGTGTGGTTGATCATGGATTTGGCTGAATCTTGTTTTATCATCAATCTGATTGGGTCAGAGTATAATAGTTTAGGAGGTGTGTGGGTAAGTGTGATTTGACTATATGAAACTTGAAGCTTCGTATGATAGGGACCTGATTGTGTGATCTTTTCCCTTTGCCCTTTTTCCTTCTCTGTTTCGTTCAACTCTGCTGGATTTTTCTTACACAAGTTCAATTTTTGTCAATCAAATTGCTGTTATGGGTATTTCATCATATTTGTTTTCTGGGTCTGACCCCTTTTTCTTTTCTTTTTTGAAGGGAAACCAAATTTATATATATATGTTTAG

Coding sequence (CDS)

ATGTTGCTGTACAAGCAGAAGAAGAATCAGAATGTTAAGGGCAACAGGCTCTTGATCAGCGTCAATGTGCTCGGCAGCGCTGGGCCGATTCGATTTATTGTGAACGAGGAGCAACTTGTTGCTGCTGTTATTGATACAGCATTGAAATCCTACGCGCGTGAGGGCCGGCTTCCGATTCTTGGGTCCGATCTCAGGGATTTCCAGCTTTACTGCCCAATTGCTGGACCAGATGCCTTGAGTCCATGGGACACAATTGGATCGCACGGATCCCGGAACTTCATGTTGTGCAAGAAACCACAGCCAGAGAAAGTGGGAGAACATGGAAATTCGCCACCGGAGCCAAGTATCCCCCGCAAAGGCACAGGAAGCTGGAAGTCATGGATCAACAAGTCTCTGAATATGAAAATCTATTCCCATTGA

Protein sequence

MLLYKQKKNQNVKGNRLLISVNVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPILGSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEHGNSPPEPSIPRKGTGSWKSWINKSLNMKIYSH

Homology

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BLAST of Carg26340 vs. NCBI nr
Match: XP_022939519.1 (uncharacterized protein At4g22758-like [Cucurbita moschata] >XP_023551231.1 uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.9 bits (738), Expect = 9.3e-75
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISVNVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLIS+NVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 61  GSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEHGNSPPEPSIPRKG 120
           GSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEHGNSPPEPSIPRKG
Sbjct: 61  GSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEHGNSPPEPSIPRKG 120

Query: 121 TGSWKSWINKSLNMKIYSH 140
           TGSWKSWINKSLNMKIYSH
Sbjct: 121 TGSWKSWINKSLNMKIYSH 139

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BLAST of Carg26340 vs. NCBI nr
Match: XP_016898863.1 (PREDICTED: uncharacterized protein At4g22758-like [Cucumis melo])

HSP 1 Score: 266.5 bits (680), Expect = 4.9e-68
Identity = 127/139 (91.37%), Postives = 131/139 (94.24%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISVNVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLIS+NVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 61  GSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEHGNSPPEPSIPRKG 120
           GSDLRDFQLYCP  GPDALSPWDTIGSHG+RNFMLCKKPQPEKV E G SPP P+IPRK 
Sbjct: 61  GSDLRDFQLYCPNTGPDALSPWDTIGSHGARNFMLCKKPQPEKVSEEGKSPPGPTIPRKS 120

Query: 121 TGSWKSWINKSLNMKIYSH 140
            GSWKSWINKSLN+KIYSH
Sbjct: 121 AGSWKSWINKSLNLKIYSH 139

[Close]

BLAST of Carg26340 vs. NCBI nr
Match: XP_004150595.1 (PREDICTED: uncharacterized protein At4g22758-like [Cucumis sativus] >KGN51491.1 hypothetical protein Csa_5G569870 [Cucumis sativus])

HSP 1 Score: 261.5 bits (667), Expect = 1.6e-66
Identity = 125/139 (89.93%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISVNVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLIS+NVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 61  GSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEHGNSPPEPSIPRKG 120
           GSDLRDFQLYCP  GPDALSPWDTIGSHG+RNFMLCKKPQPEKV E G +P  P+IPRK 
Sbjct: 61  GSDLRDFQLYCPNTGPDALSPWDTIGSHGARNFMLCKKPQPEKVPEEGKTPSGPAIPRKS 120

Query: 121 TGSWKSWINKSLNMKIYSH 140
            GSWKSWINKSLN+KIYSH
Sbjct: 121 AGSWKSWINKSLNLKIYSH 139

[Close]

BLAST of Carg26340 vs. NCBI nr
Match: XP_023521148.1 (uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo] >XP_023521149.1 uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.4 bits (638), Expect = 3.7e-63
Identity = 121/139 (87.05%), Postives = 127/139 (91.37%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISVNVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLIS+NVLGSAGPIRFIV+EEQLVA VIDTALKSYAREGRLPIL
Sbjct: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62

Query: 61  GSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEHGNSPPEPSIPRKG 120
           GSDL DFQLYCP AGPDALSPWDTIGSHG+RNF LCKKPQ EKVGE G +   P+I RK 
Sbjct: 63  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKVGEDGKAASRPAIHRKA 122

Query: 121 TGSWKSWINKSLNMKIYSH 140
           +GSWKSWINKSLNMKIYSH
Sbjct: 123 SGSWKSWINKSLNMKIYSH 141

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BLAST of Carg26340 vs. NCBI nr
Match: XP_022152330.1 (uncharacterized protein At4g22758-like [Momordica charantia])

HSP 1 Score: 250.0 bits (637), Expect = 4.8e-63
Identity = 121/140 (86.43%), Postives = 128/140 (91.43%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISVNVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYK KKNQNVKGNRLLIS+NVLGSAGPIRFIV+EEQLVAAVIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKHKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 61  GSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEHGNSPPEPSI-PRK 120
           GSDL DFQLYCP AGPDALSPWD IGSHG+RNFMLCKKPQPEK+GE   SPP P I  RK
Sbjct: 61  GSDLNDFQLYCPNAGPDALSPWDAIGSHGARNFMLCKKPQPEKMGEDAKSPPGPPISSRK 120

Query: 121 GTGSWKSWINKSLNMKIYSH 140
           G GSW+SWIN+SLN+KIYSH
Sbjct: 121 GPGSWRSWINRSLNLKIYSH 140

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BLAST of Carg26340 vs. TAIR10
Match: AT1G70780.1 (unknown protein)

HSP 1 Score: 189.1 bits (479), Expect = 1.8e-48
Identity = 97/141 (68.79%), Postives = 113/141 (80.14%), Query Frame = 0


Query: 1   MLLY-KQKKNQNVKGNRLLISVNVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPI 60
           MLLY KQKKNQN KGNR+LISV VLGSAGPIRF+  E+ LVA+VIDTALK YAREGRLP+
Sbjct: 1   MLLYNKQKKNQNAKGNRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPL 60

Query: 61  LGSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGE-HGNSPPEPSIPR 120
           LGSD  DF LYCP+ GP+ALS WD IGS G+RNFMLC+KP+ +KV E +G S    +  R
Sbjct: 61  LGSDFNDFLLYCPMVGPEALSTWDAIGSLGARNFMLCRKPEEKKVEESNGRSDSTINGAR 120

Query: 121 KGTGSWKSWINKSLNMKIYSH 140
           KG GS K+WINKS N+K+ SH
Sbjct: 121 KG-GSLKAWINKSFNLKVSSH 140

[Close]

BLAST of Carg26340 vs. TAIR10
Match: AT1G23150.1 (unknown protein)

HSP 1 Score: 176.4 bits (446), Expect = 1.2e-44
Identity = 96/142 (67.61%), Postives = 109/142 (76.76%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISVNVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYK KKNQ VKGNR+LISV  LGSAGPIRF+ NE  LVA+VIDTALK YAREGRLPIL
Sbjct: 1   MLLYK-KKNQIVKGNRILISVTFLGSAGPIRFVANEGDLVASVIDTALKCYAREGRLPIL 60

Query: 61  GSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLC-KKPQPEKVGE-HGNSPPEPSIPR 120
           GSD  DF  YCP+ GP ALSPW+ IGS G RNFMLC KKP+ +KV E  G S    +  R
Sbjct: 61  GSDFNDFVFYCPMVGPGALSPWEAIGSVGVRNFMLCKKKPEEKKVEEDKGRSNFPINGAR 120

Query: 121 KGT-GSWKSWINKSLNMKIYSH 140
           KG  GS+K+WINKSL +K+ +H
Sbjct: 121 KGAGGSFKAWINKSLRLKVTTH 141

[Close]

BLAST of Carg26340 vs. TAIR10
Match: AT5G37730.1 (unknown protein)

HSP 1 Score: 102.4 bits (254), Expect = 2.2e-22
Identity = 54/105 (51.43%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 8   KNQNVKG------NRLLISVNVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPILG 67
           +N+NVKG       +LL+SVNVLGS GPIRF+ NE+  V++ I+T LK+YAR+GR+P+LG
Sbjct: 3   RNENVKGVMKRKNKKLLVSVNVLGSVGPIRFLANEDDEVSSAINTTLKAYARQGRIPVLG 62

Query: 68  SDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKK-PQP-EKV 105
            D+ +F  Y   AG + L P + IGS    NF++CKK P+P EKV
Sbjct: 63  FDVDNFIFYSINAGFNTLHPQEKIGSMDVTNFLMCKKEPRPLEKV 107

[Close]

BLAST of Carg26340 vs. TAIR10
Match: AT2G01554.1 (unknown protein)

HSP 1 Score: 53.9 bits (128), Expect = 9.1e-08
Identity = 44/141 (31.21%), Postives = 63/141 (44.68%), Query Frame = 0


Query: 2   LLYKQKKNQNVKG---NRLLISVNVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLP 61
           +LY  K  +N K    NR L+S+NVLGSAG                      +    ++P
Sbjct: 1   MLYNNKHQRNQKSKTTNRFLVSINVLGSAG----------------------FHFSDQIP 60

Query: 62  ILGSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEHGNSPPEPSIPR 121
              SD     L  P+ G         IGS GSRNF+L  K + + + +   S    +  R
Sbjct: 61  AF-SDF--IALTVPLKG--------KIGSTGSRNFVLSNKLETQNLED---SMMTTTTTR 105

Query: 122 KGTGSWKSWINKSLNMKIYSH 140
           K +G WK+W+NKS  + + SH
Sbjct: 121 KTSGRWKAWLNKSFGLMVPSH 105

[Close]

BLAST of Carg26340 vs. TAIR10
Match: AT4G22758.1 (unknown protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-06
Identity = 40/112 (35.71%), Postives = 54/112 (48.21%), Query Frame = 0


Query: 11  NVKGN-----RLLISVNVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPILGSDLR 70
           N +GN     +++ISV V GS GP+R +V     V   I   +  Y +EGR P L  D  
Sbjct: 113 NQEGNTKEAPKVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKLDRD-S 172

Query: 71  DFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEH-GNSPPEPSI 117
            F+L+        L   + IG  GSR+F + KK  PE  G   G SP   S+
Sbjct: 173 AFELHQSHFSIQCLEKREIIGELGSRSFYMRKK-APETGGSFAGISPARTSL 222

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BLAST of Carg26340 vs. Swiss-Prot
Match: sp|Q56XJ7|Y4276_ARATH (Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.1e-05
Identity = 40/112 (35.71%), Postives = 54/112 (48.21%), Query Frame = 0


Query: 11  NVKGN-----RLLISVNVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPILGSDLR 70
           N +GN     +++ISV V GS GP+R +V     V   I   +  Y +EGR P L  D  
Sbjct: 113 NQEGNTKEAPKVIISVAVEGSPGPVRAMVKLSCNVEETIKIVVDKYCKEGRTPKLDRD-S 172

Query: 71  DFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEH-GNSPPEPSI 117
            F+L+        L   + IG  GSR+F + KK  PE  G   G SP   S+
Sbjct: 173 AFELHQSHFSIQCLEKREIIGELGSRSFYMRKK-APETGGSFAGISPARTSL 222

[Close]

BLAST of Carg26340 vs. TrEMBL
Match: tr|A0A1S4DSB9|A0A1S4DSB9_CUCME (uncharacterized protein At4g22758-like OS=Cucumis melo OX=3656 GN=LOC107990297 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.3e-68
Identity = 127/139 (91.37%), Postives = 131/139 (94.24%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISVNVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLIS+NVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 61  GSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEHGNSPPEPSIPRKG 120
           GSDLRDFQLYCP  GPDALSPWDTIGSHG+RNFMLCKKPQPEKV E G SPP P+IPRK 
Sbjct: 61  GSDLRDFQLYCPNTGPDALSPWDTIGSHGARNFMLCKKPQPEKVSEEGKSPPGPTIPRKS 120

Query: 121 TGSWKSWINKSLNMKIYSH 140
            GSWKSWINKSLN+KIYSH
Sbjct: 121 AGSWKSWINKSLNLKIYSH 139

[Close]

BLAST of Carg26340 vs. TrEMBL
Match: tr|A0A0A0KUW8|A0A0A0KUW8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G569870 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.0e-66
Identity = 125/139 (89.93%), Postives = 130/139 (93.53%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISVNVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQNVKGNRLLIS+NVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 61  GSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEHGNSPPEPSIPRKG 120
           GSDLRDFQLYCP  GPDALSPWDTIGSHG+RNFMLCKKPQPEKV E G +P  P+IPRK 
Sbjct: 61  GSDLRDFQLYCPNTGPDALSPWDTIGSHGARNFMLCKKPQPEKVPEEGKTPSGPAIPRKS 120

Query: 121 TGSWKSWINKSLNMKIYSH 140
            GSWKSWINKSLN+KIYSH
Sbjct: 121 AGSWKSWINKSLNLKIYSH 139

[Close]

BLAST of Carg26340 vs. TrEMBL
Match: tr|A0A1R3GRH6|A0A1R3GRH6_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_23988 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 8.3e-56
Identity = 108/139 (77.70%), Postives = 123/139 (88.49%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISVNVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYKQKKNQ+ KGNRLLIS+ VLGSAGPIRF+VNEE+LVAAVIDTALKSYAREGRLP+L
Sbjct: 1   MLLYKQKKNQSAKGNRLLISITVLGSAGPIRFVVNEEELVAAVIDTALKSYAREGRLPVL 60

Query: 61  GSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEHGNSPPEPSIPRKG 120
           GSDL DF LYCP AG DALSPW+TIGS G+RNFMLCKKP+ EK+ + G   P  +IPRKG
Sbjct: 61  GSDLNDFLLYCPSAGSDALSPWETIGSLGARNFMLCKKPKTEKIEDDGR--PTEAIPRKG 120

Query: 121 TGSWKSWINKSLNMKIYSH 140
           +G+WK+WINKSLN+KI SH
Sbjct: 121 SGNWKAWINKSLNLKISSH 137

[Close]

BLAST of Carg26340 vs. TrEMBL
Match: tr|M5XHL6|M5XHL6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G329500 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.0e-54
Identity = 109/140 (77.86%), Postives = 121/140 (86.43%), Query Frame = 0


Query: 1   MLLYKQKKNQN-VKGNRLLISVNVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPI 60
           MLLYKQKKN N  KGNRLLIS+ VLGSAGPIRF+VNEE+LVAAVIDTALKSYAREGRLP+
Sbjct: 1   MLLYKQKKNPNSAKGNRLLISITVLGSAGPIRFVVNEEELVAAVIDTALKSYAREGRLPV 60

Query: 61  LGSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEHGNSPPEPSIPRK 120
           LGSDL DF LYCP AGPDALSPWDTIG+ G+RNFMLCKKPQP K+    +  P  +I RK
Sbjct: 61  LGSDLNDFLLYCPNAGPDALSPWDTIGAQGARNFMLCKKPQPVKM--DSDEIPAAAITRK 120

Query: 121 GTGSWKSWINKSLNMKIYSH 140
           G+GSWK+WINKSLN+KI SH
Sbjct: 121 GSGSWKAWINKSLNLKISSH 138

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BLAST of Carg26340 vs. TrEMBL
Match: tr|A0A2N9ETJ3|A0A2N9ETJ3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5995 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.0e-54
Identity = 108/139 (77.70%), Postives = 119/139 (85.61%), Query Frame = 0


Query: 1   MLLYKQKKNQNVKGNRLLISVNVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60
           MLLYK KKNQN K NRLLIS+ VLGSAGPIRF+VNE++LVAAVIDTALKSYAREGRLPIL
Sbjct: 51  MLLYKPKKNQNAKANRLLISITVLGSAGPIRFVVNEDELVAAVIDTALKSYAREGRLPIL 110

Query: 61  GSDLRDFQLYCPIAGPDALSPWDTIGSHGSRNFMLCKKPQPEKVGEHGNSPPEPSIPRKG 120
           GS+L +F LYCP AGPDALSPWDTIGS G RNFMLCKKPQP K+     +   P I RKG
Sbjct: 111 GSNLNEFILYCPNAGPDALSPWDTIGSQGVRNFMLCKKPQPVKMAGDDETSIRP-ISRKG 170

Query: 121 TGSWKSWINKSLNMKIYSH 140
           +GSWK+WINKSLN+KIYSH
Sbjct: 171 SGSWKAWINKSLNLKIYSH 188

The following BLAST results are available for this feature:

BLAST of Carg26340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939519.1	9.3e-75	99.28	uncharacterized protein At4g22758-like [Cucurbita moschata] >XP_023551231.1 unch...	[more]
XP_016898863.1	4.9e-68	91.37	PREDICTED: uncharacterized protein At4g22758-like [Cucumis melo]	[more]
XP_004150595.1	1.6e-66	89.93	PREDICTED: uncharacterized protein At4g22758-like [Cucumis sativus] >KGN51491.1 ...	[more]
XP_023521148.1	3.7e-63	87.05	uncharacterized protein At4g22758-like [Cucurbita pepo subsp. pepo] >XP_02352114...	[more]
XP_022152330.1	4.8e-63	86.43	uncharacterized protein At4g22758-like [Momordica charantia]	[more]

BLAST of Carg26340 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70780.1	1.8e-48	68.79	unknown protein	[more]
AT1G23150.1	1.2e-44	67.61	unknown protein	[more]
AT5G37730.1	2.2e-22	51.43	unknown protein	[more]
AT2G01554.1	9.1e-08	31.21	unknown protein	[more]
AT4G22758.1	1.7e-06	35.71	unknown protein	[more]

BLAST of Carg26340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q56XJ7\|Y4276_ARATH	3.1e-05	35.71	Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 P...	[more]

BLAST of Carg26340 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DSB9\|A0A1S4DSB9_CUCME	3.3e-68	91.37	uncharacterized protein At4g22758-like OS=Cucumis melo OX=3656 GN=LOC107990297 P...	[more]
tr\|A0A0A0KUW8\|A0A0A0KUW8_CUCSA	1.0e-66	89.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G569870 PE=4 SV=1	[more]
tr\|A0A1R3GRH6\|A0A1R3GRH6_COCAP	8.3e-56	77.70	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_23988 PE=4 ...	[more]
tr\|M5XHL6\|M5XHL6_PRUPE	2.0e-54	77.86	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G329500 PE=4 SV=1	[more]
tr\|A0A2N9ETJ3\|A0A2N9ETJ3_FAGSY	2.0e-54	77.70	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5995 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26340-RA	Carg26340-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..122
None	No IPR available	PANTHER	PTHR33270:SF5	SUBFAMILY NOT NAMED	coord: 1..139
None	No IPR available	PANTHER	PTHR33270	FAMILY NOT NAMED	coord: 1..139

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26340	Cla003930	Watermelon (97103) v1	carwmB0181
Carg26340	Csa5G569870	Cucumber (Chinese Long) v2	carcuB0211
Carg26340	MELO3C005301	Melon (DHL92) v3.5.1	carmeB0193
Carg26340	ClCG01G006290	Watermelon (Charleston Gray)	carwcgB0183
Carg26340	CSPI05G19530	Wild cucumber (PI 183967)	carcpiB0219
Carg26340	Cucsa.280330	Cucumber (Gy14) v1	carcgyB0230
Carg26340	CmoCh15G009980	Cucurbita moschata (Rifu)	carcmoB0270
Carg26340	Lsi09G006640	Bottle gourd (USVL1VR-Ls)	carlsiB169
Carg26340	Cp4.1LG01g18480	Cucurbita pepo (Zucchini)	carcpeB0275
Carg26340	Cp4.1LG13g03650	Cucurbita pepo (Zucchini)	carcpeB0274
Carg26340	CsGy5G019040	Cucumber (Gy14) v2	carcgybB0204
Carg26340	MELO3C005301.2	Melon (DHL92) v3.6.1	carmedB0197
Carg26340	CsaV3_5G028370	Cucumber (Chinese Long) v3	carcucB0217
Carg26340	Cla97C01G006600	Watermelon (97103) v2	carwmbB0195
Carg26340	Bhi12G000788	Wax gourd	carwgoB0239

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26340	Silver-seed gourd	carcarB229
Carg26340	Cucurbita maxima (Rimu)	carcmaB0263
Carg26340	Cucurbita maxima (Rimu)	carcmaB0264
Carg26340	Cucurbita moschata (Rifu)	carcmoB0271