CmoCh04G022220 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G022220
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Senescence-associated protein
Location	Cmo_Chr04 : 16608491 .. 16610121 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCTAAGCAAATCCATTTAAATACCACCTGCCATCCTCGTCGGTACCCACAATTCTCAGTTTTCACCATTGTTTTCTTCTTCTCAATTCATTGTATTCCCTTCTTTCTCTCCTCTCTCTCTGCAAATCAATTCCGTTTCTCGCTGTGATTGTTTTCTTTCATCCGCCGGAATAGGTTCGAGAATTTTTCAAGGAGTTGTGAATGGTTGAAGAAAATTCCAGTAGTAGTAATTACATGCGCTCCCTTTTGGATTCAAGGGCGAGCGCTCGTCTTCCTCTTTCTGCTTTTTCTTCTTTTGCTTTTGGTTCTTGCAAGGAAGGCTGGTACTACCGCTGCCTTGGAGTTGACCCTTGAGATCTCTCTCTCTAATCCATATACTCATTTCAAGGAATTTTCATTTTCTTTAAGTTTTTGCGATTTTTCTCTTTTGATTTTTTGATACCGGCGCTAGCTTCGGTGAGTTTCTCGGGGCTGTTGTCGTCGGTATCCGGTTCCCTGATTCGGATATAGTTTGAAGGAAAAAGAAGGGATTGCGATTTCTTTTTTTTAATGAAGATGTTGCTGTACAAGCAGAAGAAGAACCAGAATGTTAAGGGCAATAGGCTGTTGATCAGCATCAATGTGCTCGGCAGCGCTGGCCCGATTCGATTTATTGTGAGCGAGGAGCAACTTGTTGCTGATGTTATTGATACCGCGTTGAAATCCTACGCGCGTGAGGGCCGGCTCCCAATTCTTGGCTCTGATCTTCACGATTTCCAGCTTTATTGTCCGAGTGCGGGACCAGATGGTAATTCTAATTTTATATTTTGTTCTCAATTCATTTGTGTTAATTCGTTGCAATTTTCCTCTACAATCATGTTGCATGTTTCTAATCTGAAAGGATGGTGAAAAATTAGATGTTATTCGGTATTAATCTCATTTTGTGATGGGATTCTCTGTTTTGGAATGTTTGGATTCTCTGTTGTTCTGTCTTGAGAATCCTCTGATCAAAAAAATTCTGGGCTGTAGTTTCTCATATTGTATGGGTTTTTTTGTGCAGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCACGTTGTGCAAGAAACCACAGGCAGAGAAAGCAGGAGAAGATGGAAAAGCAGCATCACGGCCAGCCATCCATCGCAAAGCCTCAGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATATGAAAATCTATTCCCATTGAATCCGCGCAATGATGATGGGTGATAGCCTTCAATTAGGTTGGTTTTAGTTTGTTGTGAGCCTTTGCAATTTGTATTTTTCCTCCTTTTGTAATCTTGTTGGACCCGTATTTCAACTTGCTTTAAAGTTGGGTGGGGTTCCCTCTCCTCTTCTTCAAATAAACACTTAGATTTTACCCCTTTGAAACGAATTGCATCATAGTTTTTGATTGGCCATGTATTGTTTAAAAGGTTATGGATCGAACTCGAAGAGTGTGTTCAATGAAAATGGGAGTTCGGCGCACATTAAGGAATTGTATAATTGAAAAGGTGGTGGTGGATGGTTTGATGTTGACTGTGTGAAATTTGAAGCGCTATGTATATGACGTTTTGTGGATACTGATTATGTCATTGACAGAGCCTCAC

mRNA sequence

ACCCTAAGCAAATCCATTTAAATACCACCTGCCATCCTCGTCGGTACCCACAATTCTCAGTTTTCACCATTGTTTTCTTCTTCTCAATTCATTGTATTCCCTTCTTTCTCTCCTCTCTCTCTGCAAATCAATTCCGTTTCTCGCTGTGATTGTTTTCTTTCATCCGCCGGAATAGGTTCGAGAATTTTTCAAGGAGTTGTGAATGGTTGAAGAAAATTCCAGTAGTAGTAATTACATGCGCTCCCTTTTGGATTCAAGGGCGAGCGCTCGTCTTCCTCTTTCTGCTTTTTCTTCTTTTGCTTTTGGTTCTTGCAAGGAAGGCTGGTACTACCGCTGCCTTGGAGTTGACCCTTGAGATCTCTCTCTCTAATCCATATACTCATTTCAAGGAATTTTCATTTTCTTTAAGTTTTTGCGATTTTTCTCTTTTGATTTTTTGATACCGGCGCTAGCTTCGGTGAGTTTCTCGGGGCTGTTGTCGTCGGTATCCGGTTCCCTGATTCGGATATAGTTTGAAGGAAAAAGAAGGGATTGCGATTTCTTTTTTTTAATGAAGATGTTGCTGTACAAGCAGAAGAAGAACCAGAATGTTAAGGGCAATAGGCTGTTGATCAGCATCAATGTGCTCGGCAGCGCTGGCCCGATTCGATTTATTGTGAGCGAGGAGCAACTTGTTGCTGATGTTATTGATACCGCGTTGAAATCCTACGCGCGTGAGGGCCGGCTCCCAATTCTTGGCTCTGATCTTCACGATTTCCAGCTTTATTGTCCGAGTGCGGGACCAGATGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCACGTTGTGCAAGAAACCACAGGCAGAGAAAGCAGGAGAAGATGGAAAAGCAGCATCACGGCCAGCCATCCATCGCAAAGCCTCAGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATATGAAAATCTATTCCCATTGAATCCGCGCAATGATGATGGGTGATAGCCTTCAATTAGGTTGGTTTTAGTTTGTTGTGAGCCTTTGCAATTTGTATTTTTCCTCCTTTTGTAATCTTGTTGGACCCGTATTTCAACTTGCTTTAAAGTTGGGTGGGGTTCCCTCTCCTCTTCTTCAAATAAACACTTAGATTTTACCCCTTTGAAACGAATTGCATCATAGTTTTTGATTGGCCATGTATTGTTTAAAAGGTTATGGATCGAACTCGAAGAGTGTGTTCAATGAAAATGGGAGTTCGGCGCACATTAAGGAATTGTATAATTGAAAAGGTGGTGGTGGATGGTTTGATGTTGACTGTGTGAAATTTGAAGCGCTATGTATATGACGTTTTGTGGATACTGATTATGTCATTGACAGAGCCTCAC

Coding sequence (CDS)

ATGAAGATGTTGCTGTACAAGCAGAAGAAGAACCAGAATGTTAAGGGCAATAGGCTGTTGATCAGCATCAATGTGCTCGGCAGCGCTGGCCCGATTCGATTTATTGTGAGCGAGGAGCAACTTGTTGCTGATGTTATTGATACCGCGTTGAAATCCTACGCGCGTGAGGGCCGGCTCCCAATTCTTGGCTCTGATCTTCACGATTTCCAGCTTTATTGTCCGAGTGCGGGACCAGATGCCTTGAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCACGTTGTGCAAGAAACCACAGGCAGAGAAAGCAGGAGAAGATGGAAAAGCAGCATCACGGCCAGCCATCCATCGCAAAGCCTCAGGGAGCTGGAAGTCATGGATCAACAAGTCTCTGAATATGAAAATCTATTCCCATTGA

Homology

[Close]

BLAST of CmoCh04G022220 vs. TrEMBL
Match: A0A0A0KUW8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G569870 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.3e-63
Identity = 122/139 (87.77%), Postives = 128/139 (92.09%), Query Frame = 1


Query: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIV+EEQLVA VIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 63  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHRKA 122
           GSDL DFQLYCP+ GPDALSPWDTIGSHGARNF LCKKPQ EK  E+GK  S PAI RK+
Sbjct: 61  GSDLRDFQLYCPNTGPDALSPWDTIGSHGARNFMLCKKPQPEKVPEEGKTPSGPAIPRKS 120

Query: 123 SGSWKSWINKSLNMKIYSH 142
           +GSWKSWINKSLN+KIYSH
Sbjct: 121 AGSWKSWINKSLNLKIYSH 139

[Close]

BLAST of CmoCh04G022220 vs. TrEMBL
Match: A0A0B0NPI3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_02623 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.1e-54
Identity = 108/139 (77.70%), Postives = 123/139 (88.49%), Query Frame = 1


Query: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62
           MLLYKQKKNQ  KGNRLLIS+ VLGSAGPIRF+V+EE+LVA VIDTALKSYAREGRLP+L
Sbjct: 1   MLLYKQKKNQGPKGNRLLISVTVLGSAGPIRFVVNEEELVAAVIDTALKSYAREGRLPVL 60

Query: 63  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHRKA 122
           GS+L+DF LYCPSAG DALSPW+TIGS GARNF LCKKP+ EK  +DGKAA   +I+RKA
Sbjct: 61  GSNLNDFLLYCPSAGSDALSPWETIGSQGARNFMLCKKPRTEKVKDDGKAAE--SINRKA 120

Query: 123 SGSWKSWINKSLNMKIYSH 142
           SG+WK+W NKSLN+KI SH
Sbjct: 121 SGNWKAWFNKSLNLKISSH 137

[Close]

BLAST of CmoCh04G022220 vs. TrEMBL
Match: A0A0D2QER4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G177100 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.3e-54
Identity = 107/139 (76.98%), Postives = 123/139 (88.49%), Query Frame = 1


Query: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62
           MLLYKQKK+Q  KGNRLLIS+ VLGSAGPIRF+V+EE+LVA VIDTALKSYAREGRLP+L
Sbjct: 1   MLLYKQKKSQGPKGNRLLISVTVLGSAGPIRFVVNEEELVAAVIDTALKSYAREGRLPVL 60

Query: 63  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHRKA 122
           GS+L+DF LYCPSAG DALSPW+TIGS GARNF LCKKP+ EK  +DGKAA   +I+RKA
Sbjct: 61  GSNLNDFLLYCPSAGSDALSPWETIGSQGARNFMLCKKPRTEKVKDDGKAAE--SINRKA 120

Query: 123 SGSWKSWINKSLNMKIYSH 142
           SG+WK+W NKSLN+KI SH
Sbjct: 121 SGNWKAWFNKSLNLKISSH 137

[Close]

BLAST of CmoCh04G022220 vs. TrEMBL
Match: M5XHL6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013143mg PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.1e-52
Identity = 109/140 (77.86%), Postives = 119/140 (85.00%), Query Frame = 1


Query: 3   MLLYKQKKNQN-VKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPI 62
           MLLYKQKKN N  KGNRLLISI VLGSAGPIRF+V+EE+LVA VIDTALKSYAREGRLP+
Sbjct: 1   MLLYKQKKNPNSAKGNRLLISITVLGSAGPIRFVVNEEELVAAVIDTALKSYAREGRLPV 60

Query: 63  LGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHRK 122
           LGSDL+DF LYCP+AGPDALSPWDTIG+ GARNF LCKKPQ  K   D   A+  AI RK
Sbjct: 61  LGSDLNDFLLYCPNAGPDALSPWDTIGAQGARNFMLCKKPQPVKMDSDEIPAA--AITRK 120

Query: 123 ASGSWKSWINKSLNMKIYSH 142
            SGSWK+WINKSLN+KI SH
Sbjct: 121 GSGSWKAWINKSLNLKISSH 138

[Close]

BLAST of CmoCh04G022220 vs. TrEMBL
Match: A0A059D744_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02935 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 9.9e-51
Identity = 101/139 (72.66%), Postives = 117/139 (84.17%), Query Frame = 1


Query: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62
           MLLYKQKKNQ+ KGNRLLISINVLGSAGPIRF+V EE+LVA VIDTALKSYAREGRLP+L
Sbjct: 1   MLLYKQKKNQSAKGNRLLISINVLGSAGPIRFVVGEEELVAAVIDTALKSYAREGRLPVL 60

Query: 63  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHRKA 122
           GSDL+DF LYCP++G DALSPWD IGS GARNF LCKKP+ +   +D ++     I RK 
Sbjct: 61  GSDLNDFLLYCPTSGSDALSPWDMIGSPGARNFLLCKKPKTDVVADDRRSPD-AGIARKG 120

Query: 123 SGSWKSWINKSLNMKIYSH 142
           +GSWKSWINKS ++K+ SH
Sbjct: 121 NGSWKSWINKSFSLKVSSH 138

[Close]

BLAST of CmoCh04G022220 vs. TAIR10
Match: AT1G70780.1 (AT1G70780.1 unknown protein)

HSP 1 Score: 182.6 bits (462), Expect = 1.7e-46
Identity = 90/140 (64.29%), Postives = 105/140 (75.00%), Query Frame = 1


Query: 3   MLLY-KQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPI 62
           MLLY KQKKNQN KGNR+LIS+ VLGSAGPIRF+  E+ LVA VIDTALK YAREGRLP+
Sbjct: 1   MLLYNKQKKNQNAKGNRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPL 60

Query: 63  LGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHRK 122
           LGSD +DF LYCP  GP+ALS WD IGS GARNF LC+KP+ +K  E    +       +
Sbjct: 61  LGSDFNDFLLYCPMVGPEALSTWDAIGSLGARNFMLCRKPEEKKVEESNGRSDSTINGAR 120

Query: 123 ASGSWKSWINKSLNMKIYSH 142
             GS K+WINKS N+K+ SH
Sbjct: 121 KGGSLKAWINKSFNLKVSSH 140

[Close]

BLAST of CmoCh04G022220 vs. TAIR10
Match: AT1G23150.1 (AT1G23150.1 unknown protein)

HSP 1 Score: 174.5 bits (441), Expect = 4.7e-44
Identity = 91/142 (64.08%), Postives = 105/142 (73.94%), Query Frame = 1


Query: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62
           MLLYK KKNQ VKGNR+LIS+  LGSAGPIRF+ +E  LVA VIDTALK YAREGRLPIL
Sbjct: 1   MLLYK-KKNQIVKGNRILISVTFLGSAGPIRFVANEGDLVASVIDTALKCYAREGRLPIL 60

Query: 63  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIH--- 122
           GSD +DF  YCP  GP ALSPW+ IGS G RNF LCKK   EK  E+ K  S   I+   
Sbjct: 61  GSDFNDFVFYCPMVGPGALSPWEAIGSVGVRNFMLCKKKPEEKKVEEDKGRSNFPINGAR 120

Query: 123 RKASGSWKSWINKSLNMKIYSH 142
           + A GS+K+WINKSL +K+ +H
Sbjct: 121 KGAGGSFKAWINKSLRLKVTTH 141

[Close]

BLAST of CmoCh04G022220 vs. TAIR10
Match: AT5G37730.1 (AT5G37730.1 unknown protein)

HSP 1 Score: 98.6 bits (244), Expect = 3.3e-21
Identity = 51/115 (44.35%), Postives = 72/115 (62.61%), Query Frame = 1


Query: 10  KNQNVKG------NRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPILG 69
           +N+NVKG       +LL+S+NVLGS GPIRF+ +E+  V+  I+T LK+YAR+GR+P+LG
Sbjct: 3   RNENVKGVMKRKNKKLLVSVNVLGSVGPIRFLANEDDEVSSAINTTLKAYARQGRIPVLG 62

Query: 70  SDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAI 119
            D+ +F  Y  +AG + L P + IGS    NF +CKK        +G   SR  I
Sbjct: 63  FDVDNFIFYSINAGFNTLHPQEKIGSMDVTNFLMCKKEPRPLEKVEGIRESRARI 117

[Close]

BLAST of CmoCh04G022220 vs. TAIR10
Match: AT2G27830.1 (AT2G27830.1 unknown protein)

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08
Identity = 29/86 (33.72%), Postives = 51/86 (59.30%), Query Frame = 1


Query: 18  RLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL-GSDLHDFQLYCPSA 77
           +LL+++ V GS G ++ I+S E  V+D+ID A++ Y +E R P L  S+   F L+    
Sbjct: 71  KLLLNVTVQGSLGAVQIIISPESTVSDLIDAAVRQYVKEARRPFLPESEPSRFDLHYSQF 130

Query: 78  GPDALSPWDTIGSHGARNFTLCKKPQ 103
             +++   + + S G+RNF LC + +
Sbjct: 131 SLESIVRDEKLISLGSRNFFLCGRKE 156

[Close]

BLAST of CmoCh04G022220 vs. TAIR10
Match: AT2G01554.1 (AT2G01554.1 unknown protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-06
Identity = 47/141 (33.33%), Postives = 62/141 (43.97%), Query Frame = 1


Query: 4   LLYKQKKNQNVKG---NRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLP 63
           +LY  K  +N K    NR L+SINVLGSAG   F    +Q+ A     AL        +P
Sbjct: 1   MLYNNKHQRNQKSKTTNRFLVSINVLGSAG-FHF---SDQIPAFSDFIALT-------VP 60

Query: 64  ILGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHR 123
           + G                       IGS G+RNF L  K + +   ED    +     R
Sbjct: 61  LKGK----------------------IGSTGSRNFVLSNKLETQNL-EDSMMTTTTT--R 105

Query: 124 KASGSWKSWINKSLNMKIYSH 142
           K SG WK+W+NKS  + + SH
Sbjct: 121 KTSGRWKAWLNKSFGLMVPSH 105

[Close]

BLAST of CmoCh04G022220 vs. NCBI nr
Match: gi|449465759|ref|XP_004150595.1| (PREDICTED: uncharacterized protein At4g22758-like [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 3.2e-63
Identity = 122/139 (87.77%), Postives = 128/139 (92.09%), Query Frame = 1


Query: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIV+EEQLVA VIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 63  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHRKA 122
           GSDL DFQLYCP+ GPDALSPWDTIGSHGARNF LCKKPQ EK  E+GK  S PAI RK+
Sbjct: 61  GSDLRDFQLYCPNTGPDALSPWDTIGSHGARNFMLCKKPQPEKVPEEGKTPSGPAIPRKS 120

Query: 123 SGSWKSWINKSLNMKIYSH 142
           +GSWKSWINKSLN+KIYSH
Sbjct: 121 AGSWKSWINKSLNLKIYSH 139

[Close]

BLAST of CmoCh04G022220 vs. NCBI nr
Match: gi|659072856|ref|XP_008467130.1| (PREDICTED: uncharacterized protein LOC103504558 [Cucumis melo])

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-62
Identity = 120/139 (86.33%), Postives = 127/139 (91.37%), Query Frame = 1


Query: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62
           MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIV+EEQLVA VIDTALKSYAREGRLPIL
Sbjct: 1   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVNEEQLVAAVIDTALKSYAREGRLPIL 60

Query: 63  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHRKA 122
           GSDL DFQLYCP+ GPDALSPWDTIGSHGARNF LCKKPQ EK  E+GK+   P I RK+
Sbjct: 61  GSDLRDFQLYCPNTGPDALSPWDTIGSHGARNFMLCKKPQPEKVSEEGKSPPGPTIPRKS 120

Query: 123 SGSWKSWINKSLNMKIYSH 142
           +GSWKSWINKSLN+KIYSH
Sbjct: 121 AGSWKSWINKSLNLKIYSH 139

[Close]

BLAST of CmoCh04G022220 vs. NCBI nr
Match: gi|728835292|gb|KHG14735.1| (hypothetical protein F383_02623 [Gossypium arboreum])

HSP 1 Score: 220.7 bits (561), Expect = 1.6e-54
Identity = 108/139 (77.70%), Postives = 123/139 (88.49%), Query Frame = 1


Query: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62
           MLLYKQKKNQ  KGNRLLIS+ VLGSAGPIRF+V+EE+LVA VIDTALKSYAREGRLP+L
Sbjct: 1   MLLYKQKKNQGPKGNRLLISVTVLGSAGPIRFVVNEEELVAAVIDTALKSYAREGRLPVL 60

Query: 63  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHRKA 122
           GS+L+DF LYCPSAG DALSPW+TIGS GARNF LCKKP+ EK  +DGKAA   +I+RKA
Sbjct: 61  GSNLNDFLLYCPSAGSDALSPWETIGSQGARNFMLCKKPRTEKVKDDGKAAE--SINRKA 120

Query: 123 SGSWKSWINKSLNMKIYSH 142
           SG+WK+W NKSLN+KI SH
Sbjct: 121 SGNWKAWFNKSLNLKISSH 137

[Close]

BLAST of CmoCh04G022220 vs. NCBI nr
Match: gi|823134961|ref|XP_012467266.1| (PREDICTED: uncharacterized protein At4g22758-like [Gossypium raimondii])

HSP 1 Score: 218.8 bits (556), Expect = 6.1e-54
Identity = 107/139 (76.98%), Postives = 123/139 (88.49%), Query Frame = 1


Query: 3   MLLYKQKKNQNVKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPIL 62
           MLLYKQKK+Q  KGNRLLIS+ VLGSAGPIRF+V+EE+LVA VIDTALKSYAREGRLP+L
Sbjct: 1   MLLYKQKKSQGPKGNRLLISVTVLGSAGPIRFVVNEEELVAAVIDTALKSYAREGRLPVL 60

Query: 63  GSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHRKA 122
           GS+L+DF LYCPSAG DALSPW+TIGS GARNF LCKKP+ EK  +DGKAA   +I+RKA
Sbjct: 61  GSNLNDFLLYCPSAGSDALSPWETIGSQGARNFMLCKKPRTEKVKDDGKAAE--SINRKA 120

Query: 123 SGSWKSWINKSLNMKIYSH 142
           SG+WK+W NKSLN+KI SH
Sbjct: 121 SGNWKAWFNKSLNLKISSH 137

[Close]

BLAST of CmoCh04G022220 vs. NCBI nr
Match: gi|596205660|ref|XP_007223777.1| (hypothetical protein PRUPE_ppa013143mg [Prunus persica])

HSP 1 Score: 212.6 bits (540), Expect = 4.4e-52
Identity = 109/140 (77.86%), Postives = 119/140 (85.00%), Query Frame = 1


Query: 3   MLLYKQKKNQN-VKGNRLLISINVLGSAGPIRFIVSEEQLVADVIDTALKSYAREGRLPI 62
           MLLYKQKKN N  KGNRLLISI VLGSAGPIRF+V+EE+LVA VIDTALKSYAREGRLP+
Sbjct: 1   MLLYKQKKNPNSAKGNRLLISITVLGSAGPIRFVVNEEELVAAVIDTALKSYAREGRLPV 60

Query: 63  LGSDLHDFQLYCPSAGPDALSPWDTIGSHGARNFTLCKKPQAEKAGEDGKAASRPAIHRK 122
           LGSDL+DF LYCP+AGPDALSPWDTIG+ GARNF LCKKPQ  K   D   A+  AI RK
Sbjct: 61  LGSDLNDFLLYCPNAGPDALSPWDTIGAQGARNFMLCKKPQPVKMDSDEIPAA--AITRK 120

Query: 123 ASGSWKSWINKSLNMKIYSH 142
            SGSWK+WINKSLN+KI SH
Sbjct: 121 GSGSWKAWINKSLNLKISSH 138

The following BLAST results are available for this feature:

BLAST of CmoCh04G022220 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G022220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUW8_CUCSA	2.3e-63	87.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G569870 PE=4 SV=1	[more]
A0A0B0NPI3_GOSAR	1.1e-54	77.70	Uncharacterized protein OS=Gossypium arboreum GN=F383_02623 PE=4 SV=1	[more]
A0A0D2QER4_GOSRA	4.3e-54	76.98	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G177100 PE=4 SV=1	[more]
M5XHL6_PRUPE	3.1e-52	77.86	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013143mg PE=4 SV=1	[more]
A0A059D744_EUCGR	9.9e-51	72.66	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02935 PE=4 SV=1	[more]

BLAST of CmoCh04G022220 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70780.1	1.7e-46	64.29	unknown protein	[more]
AT1G23150.1	4.7e-44	64.08	unknown protein	[more]
AT5G37730.1	3.3e-21	44.35	unknown protein	[more]
AT2G27830.1	1.1e-08	33.72	unknown protein	[more]
AT2G01554.1	1.0e-06	33.33	unknown protein	[more]

BLAST of CmoCh04G022220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449465759\|ref\|XP_004150595.1\|	3.2e-63	87.77	PREDICTED: uncharacterized protein At4g22758-like [Cucumis sativus]	[more]
gi\|659072856\|ref\|XP_008467130.1\|	1.6e-62	86.33	PREDICTED: uncharacterized protein LOC103504558 [Cucumis melo]	[more]
gi\|728835292\|gb\|KHG14735.1\|	1.6e-54	77.70	hypothetical protein F383_02623 [Gossypium arboreum]	[more]
gi\|823134961\|ref\|XP_012467266.1\|	6.1e-54	76.98	PREDICTED: uncharacterized protein At4g22758-like [Gossypium raimondii]	[more]
gi\|596205660\|ref\|XP_007223777.1\|	4.4e-52	77.86	hypothetical protein PRUPE_ppa013143mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G022220.1	CmoCh04G022220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33270	FAMILY NOT NAMED	coord: 3..141 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G022220	Cucsa.280330	Cucumber (Gy14) v1	cgycmoB0775
CmoCh04G022220	CmaCh04G021250	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G022220	Cla003930	Watermelon (97103) v1	cmowmB710
CmoCh04G022220	Csa5G569870	Cucumber (Chinese Long) v2	cmocuB723
CmoCh04G022220	MELO3C005301	Melon (DHL92) v3.5.1	cmomeB614
CmoCh04G022220	ClCG01G006290	Watermelon (Charleston Gray)	cmowcgB640
CmoCh04G022220	CSPI05G19530	Wild cucumber (PI 183967)	cmocpiB730
CmoCh04G022220	Lsi09G006640	Bottle gourd (USVL1VR-Ls)	cmolsiB615
CmoCh04G022220	Cp4.1LG13g03650	Cucurbita pepo (Zucchini)	cmocpeB658
CmoCh04G022220	Cp4.1LG01g18480	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G022220	MELO3C005301.2	Melon (DHL92) v3.6.1	cmomedB703
CmoCh04G022220	CsaV3_5G028370	Cucumber (Chinese Long) v3	cmocucB0855
CmoCh04G022220	Cla97C01G006600	Watermelon (97103) v2	cmowmbB681
CmoCh04G022220	Bhi12G000788	Wax gourd	cmowgoB0829
CmoCh04G022220	CsGy5G019040	Cucumber (Gy14) v2	cgybcmoB633
CmoCh04G022220	Carg25239	Silver-seed gourd	carcmoB1189

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G022220	CmoCh15G009980	Cucurbita moschata (Rifu)	cmocmoB263

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G022220	Cucumber (Chinese Long) v2	cmocuB743
CmoCh04G022220	Melon (DHL92) v3.5.1	cmomeB621
CmoCh04G022220	Melon (DHL92) v3.5.1	cmomeB627
CmoCh04G022220	Watermelon (Charleston Gray)	cmowcgB636
CmoCh04G022220	Watermelon (97103) v1	cmowmB706
CmoCh04G022220	Bottle gourd (USVL1VR-Ls)	cmolsiB610
CmoCh04G022220	Cucumber (Gy14) v2	cgybcmoB656
CmoCh04G022220	Melon (DHL92) v3.6.1	cmomedB709
CmoCh04G022220	Silver-seed gourd	carcmoB0252
CmoCh04G022220	Cucumber (Chinese Long) v3	cmocucB0878
CmoCh04G022220	Cucumber (Chinese Long) v3	cmocucB0879
CmoCh04G022220	Watermelon (97103) v2	cmowmbB676
CmoCh04G022220	Watermelon (97103) v2	cmowmbB753
CmoCh04G022220	Wax gourd	cmowgoB0823
CmoCh04G022220	Cucurbita moschata (Rifu)	cmocmoB471
CmoCh04G022220	Cucumber (Gy14) v1	cgycmoB0545
CmoCh04G022220	Cucumber (Gy14) v1	cgycmoB0777
CmoCh04G022220	Cucurbita maxima (Rimu)	cmacmoB310
CmoCh04G022220	Wild cucumber (PI 183967)	cmocpiB752