ClCG01G005720 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G005720
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionCycloidea-like protein group 1A
LocationCG_Chr01 : 6193829 .. 6194680 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATCAACAAGAACAATATGAGGATCAGCTCATCAACTCATATGATGATCTACATTTCCCACATCCTTTTCTCGACGATGACGACCTATTTTTAAGCCACTTTTTATCACAACAGCAGCAGCAACAACAACTCTTCGAACAAGAAGAAAAACAAGATCATGAGGTTGATGAAACAACGAGAAAGATGAAGACGAAGACGAAAAAGAAGAAAGTAAGCGGTGGTAATAGTAGTAGAAAAAATGGAAGGAGCTGCACAAAGAGAAGAGGGAAGAAGGACAGACATAGTAAGATCTACACAGCACAAGGCCCAAGAGACCGTAGAATGAGGCTGTCCCTTCAAATTGCAAGGAAATTCTTCGACCTTCAAGACATGCTAGGCTTTGACAAAGCTAGCCAAACCATAGAGTGGCTTCTTCTTAACTCAAATTCAGCCATTAAAGATCTCAAACAAACCTACTTCTCAAACAATAGTGGGGTTAGCCATGGGAGTGTTTATTCTGGCCAATCAAGTGAGGTTGTGTCAGAGATTAATAATCAAGATCAAGAACAAGAAGAAGCTGGTGGTTTTACGGGCAGTTTCAAAGACAAAAAGGGCAGGCAATTACGTACAGTTGGTAGAGAGGCAAGGGATAGGGCAAGAGCTAGGGCAAGACAAAGAACACTCTTGAAAAATACTTCATTCCTACAGCCTCCTATTAATTTGGATCATCATCTCTCAGGTAATAATAATAATAATAATAACACCTATCTTGATTATCCAACATTTTCTTGCCCTAATTCCATTTTCCTTCCCTCTCCACTTTCCTTACCCTACTCTTTTTCTGATTCCACATTACTCAAATTGCCCTAA

mRNA sequence

ATGTATCAACAAGAACAATATGAGGATCAGCTCATCAACTCATATGATGATCTACATTTCCCACATCCTTTTCTCGACGATGACGACCTATTTTTAAGCCACTTTTTATCACAACAGCAGCAGCAACAACAACTCTTCGAACAAGAAGAAAAACAAGATCATGAGGTTGATGAAACAACGAGAAAGATGAAGACGAAGACGAAAAAGAAGAAAGTAAGCGGTGGTAATAGTAGTAGAAAAAATGGAAGGAGCTGCACAAAGAGAAGAGGGAAGAAGGACAGACATAGTAAGATCTACACAGCACAAGGCCCAAGAGACCGTAGAATGAGGCTGTCCCTTCAAATTGCAAGGAAATTCTTCGACCTTCAAGACATGCTAGGCTTTGACAAAGCTAGCCAAACCATAGAGTGGCTTCTTCTTAACTCAAATTCAGCCATTAAAGATCTCAAACAAACCTACTTCTCAAACAATAGTGGGGTTAGCCATGGGAGTGTTTATTCTGGCCAATCAAGTGAGGTTGTGTCAGAGATTAATAATCAAGATCAAGAACAAGAAGAAGCTGGTGGTTTTACGGGCAGTTTCAAAGACAAAAAGGGCAGGCAATTACGTACAGTTGGTAGAGAGGCAAGGGATAGGGCAAGAGCTAGGGCAAGACAAAGAACACTCTTGAAAAATACTTCATTCCTACAGCCTCCTATTAATTTGGATCATCATCTCTCAGGTAATAATAATAATAATAATAACACCTATCTTGATTATCCAACATTTTCTTGCCCTAATTCCATTTTCCTTCCCTCTCCACTTTCCTTACCCTACTCTTTTTCTGATTCCACATTACTCAAATTGCCCTAA

Coding sequence (CDS)

ATGTATCAACAAGAACAATATGAGGATCAGCTCATCAACTCATATGATGATCTACATTTCCCACATCCTTTTCTCGACGATGACGACCTATTTTTAAGCCACTTTTTATCACAACAGCAGCAGCAACAACAACTCTTCGAACAAGAAGAAAAACAAGATCATGAGGTTGATGAAACAACGAGAAAGATGAAGACGAAGACGAAAAAGAAGAAAGTAAGCGGTGGTAATAGTAGTAGAAAAAATGGAAGGAGCTGCACAAAGAGAAGAGGGAAGAAGGACAGACATAGTAAGATCTACACAGCACAAGGCCCAAGAGACCGTAGAATGAGGCTGTCCCTTCAAATTGCAAGGAAATTCTTCGACCTTCAAGACATGCTAGGCTTTGACAAAGCTAGCCAAACCATAGAGTGGCTTCTTCTTAACTCAAATTCAGCCATTAAAGATCTCAAACAAACCTACTTCTCAAACAATAGTGGGGTTAGCCATGGGAGTGTTTATTCTGGCCAATCAAGTGAGGTTGTGTCAGAGATTAATAATCAAGATCAAGAACAAGAAGAAGCTGGTGGTTTTACGGGCAGTTTCAAAGACAAAAAGGGCAGGCAATTACGTACAGTTGGTAGAGAGGCAAGGGATAGGGCAAGAGCTAGGGCAAGACAAAGAACACTCTTGAAAAATACTTCATTCCTACAGCCTCCTATTAATTTGGATCATCATCTCTCAGGTAATAATAATAATAATAATAACACCTATCTTGATTATCCAACATTTTCTTGCCCTAATTCCATTTTCCTTCCCTCTCCACTTTCCTTACCCTACTCTTTTTCTGATTCCACATTACTCAAATTGCCCTAA

Protein sequence

MYQQEQYEDQLINSYDDLHFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVDETTRKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQLRTVGREARDRARARARQRTLLKNTSFLQPPINLDHHLSGNNNNNNNTYLDYPTFSCPNSIFLPSPLSLPYSFSDSTLLKLP
Homology
[Close]
BLAST of ClCG01G005720 vs. Swiss-Prot
Match: TCP12_ARATH (Transcription factor TCP12 OS=Arabidopsis thaliana GN=TCP12 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.8e-28
Identity = 85/210 (40.48%), Postives = 113/210 (53.81%), Query Frame = 1 

Query: 19  HFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVDET---TRKMKTKTKKKK-VSG 78
           H+  P       FL  F       Q L +Q++   + V+      +K++ K K +K V G
Sbjct: 39  HYSSPSFPFSSDFLESFDESFLINQFLLQQQDVAANVVESPWKFCKKLELKKKNEKCVDG 98

Query: 79  GNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQT 138
             S     R   K+R   DRHSKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+T
Sbjct: 99  STSQEVQWRRTVKKR---DRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKT 158

Query: 139 IEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSF 198
           IEWL   S ++IK LK+   ++  G        G+       +   ++E++E      S 
Sbjct: 159 IEWLFSKSKTSIKQLKERVAASEGG--------GKD----EHLQVDEKEKDETLKLRVSK 218

Query: 199 KDKKGRQLRTVGREARDRARARARQRTLLK 225
           +  K  +     +E+R+RAR RAR+RT+ K
Sbjct: 219 RRTKTMESSFKTKESRERARKRARERTMAK 233

[Close]
BLAST of ClCG01G005720 vs. Swiss-Prot
Match: CYCLD_ANTML (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum GN=CYC PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.2e-25
Identity = 67/137 (48.91%), Postives = 87/137 (63.50%), Query Frame = 1 

Query: 86  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSA 145
           TK+  KKDRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK S+T++WLL  S +A
Sbjct: 74  TKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTA 133

Query: 146 IKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQL-RT 205
           IK+L Q    + S  S+ S       EVVS  +    +  +      + K K+     + 
Sbjct: 134 IKELVQ----SKSTKSNSSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQA 193

Query: 206 VGREARDRARARARQRT 222
             +E+R +ARARAR+RT
Sbjct: 194 AAKESRAKARARARERT 206

[Close]
BLAST of ClCG01G005720 vs. Swiss-Prot
Match: CYCLD_ANTMA (Transcription factor CYCLOIDEA OS=Antirrhinum majus GN=CYC PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.2e-25
Identity = 67/137 (48.91%), Postives = 87/137 (63.50%), Query Frame = 1 

Query: 86  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSA 145
           TK+  KKDRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK S+T++WLL  S +A
Sbjct: 82  TKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTA 141

Query: 146 IKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQL-RT 205
           IK+L Q    + S  S+ S       EVVS  +    +  +      + K K+     + 
Sbjct: 142 IKELVQ----SKSTKSNSSSPCDDCEEVVSVDSENVTDHSKGKSLKANNKCKEAMDSHQA 201

Query: 206 VGREARDRARARARQRT 222
             +E+R +ARARAR+RT
Sbjct: 202 AAKESRAKARARARERT 214

[Close]
BLAST of ClCG01G005720 vs. Swiss-Prot
Match: CYCLD_ANTMH (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigerum GN=CYC PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.1e-25
Identity = 66/137 (48.18%), Postives = 87/137 (63.50%), Query Frame = 1 

Query: 86  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSA 145
           TK+  KKDRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK S+T++WLL  S +A
Sbjct: 74  TKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTA 133

Query: 146 IKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQL-RT 205
           +K+L Q    + S  S+ S       EVVS  +    +  +      + K K+     + 
Sbjct: 134 VKELVQ----SKSTKSNSSSPCDDCEEVVSVESENVTDHSKGKSLKANNKCKEAMDSHQA 193

Query: 206 VGREARDRARARARQRT 222
             +E+R +ARARAR+RT
Sbjct: 194 AAKESRAKARARARERT 206

[Close]
BLAST of ClCG01G005720 vs. Swiss-Prot
Match: DICH_ANTMA (Transcription factor DICHOTOMA OS=Antirrhinum majus GN=DICH PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-23
Identity = 68/136 (50.00%), Postives = 87/136 (63.97%), Query Frame = 1 

Query: 87  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAI 146
           K   KKDRHSKI   QGPRDRR+RLS+ IARKFFDLQ+MLGFDK S+T++WLL  S  AI
Sbjct: 83  KHTPKKDRHSKINRPQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKEAI 142

Query: 147 KDLKQTYFSNNSGVSHGSVYSGQSSEVVS-EINNQDQEQEEAGGFTGSFKDKKGRQLRTV 206
           K+L Q+  S+ S +S+    S    EV+S ++      + +A     S K K GR    +
Sbjct: 143 KELVQSK-SSKSNISNSP--SECDQEVLSADLPYIGSSKGKAAVGLNSNKCKGGRDAVDL 202

Query: 207 GREARDRARARARQRT 222
            +E+R +ARARAR+RT
Sbjct: 203 AKESRAKARARARERT 215

[Close]
BLAST of ClCG01G005720 vs. TrEMBL
Match: A0A0A0KRR2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577450 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.0e-99
Identity = 219/312 (70.19%), Postives = 235/312 (75.32%), Query Frame = 1 

Query: 3   QQEQYEDQ-LINSYDDL---HFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVDE 62
           QQ+  EDQ LINSYDD    +FPHPFLDDDDLFLSHFLSQQQQ    FEQ   +D ++DE
Sbjct: 6   QQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQ---FFEQ---RDQQLDE 65

Query: 63  TTRKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARK 122
           TT+KMK   KKKK+ G +SSRKNG + TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARK
Sbjct: 66  TTKKMK---KKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARK 125

Query: 123 FFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEIN 182
           FFDLQDMLGFDKAS+TIEWLLLNSNSAIKDLKQ YF   S        SGQSSEVVSEIN
Sbjct: 126 FFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSN-------SGQSSEVVSEIN 185

Query: 183 N-------------QDQEQEEAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLK 242
           +             Q+Q+QE+   FTG FKDK K R LRTV REARDRARARARQRTLLK
Sbjct: 186 DNNGVFNVAASNLYQEQDQEDV-AFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLK 245

Query: 243 NTSFLQPPINLD-----HHLSGNN------NNNNNTYLD-YPTFSCPN-SIFLPSPLSLP 284
           NT    PPI         HLSGNN      NNNNNTYLD YPTFSCP+ SIFLPSPL LP
Sbjct: 246 NTLLPNPPITSSISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLP 300

[Close]
BLAST of ClCG01G005720 vs. TrEMBL
Match: A0A061EB69_THECC (TCP domain protein 12, putative OS=Theobroma cacao GN=TCM_011874 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.0e-38
Identity = 108/222 (48.65%), Postives = 131/222 (59.01%), Query Frame = 1 

Query: 19  HFPHPFLDDDD--LFLSHFLSQQQQQ-QQLFEQEEKQDHEVDETTRKMKTK--TKKKKVS 78
           H P PF+DDDD  L +SH LSQ QQQ           D E++  +   +TK  T K+K S
Sbjct: 43  HLPAPFIDDDDDGLLMSHLLSQAQQQIVGSSSNVAPPDSEINAASPMKETKKVTTKRKRS 102

Query: 79  GGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQ 138
            GN +++      KR GKKDRHSKIYTA GPRDRRMRLSLQIARKFFDLQDMLGFDKAS+
Sbjct: 103 AGNGAKQG--IPRKRTGKKDRHSKIYTAHGPRDRRMRLSLQIARKFFDLQDMLGFDKASK 162

Query: 139 TIEWLLLNSNSAIKDLKQTYFSNNSGVSHG--SVYSGQSSEVVSEINNQDQEQEEAGGFT 198
           TIEWL   S +AIK+L   +       S G  SV S   SEVVS     +    +  G  
Sbjct: 163 TIEWLFSKSKAAIKELTDNFPGVKHSCSGGGKSVSSTSESEVVSAAKEYEDNMGDLQGVI 222

Query: 199 G----------SFKDKKGRQ--LRTVGREARDRARARARQRT 222
                      + K++K R+     V RE+RD+ARARAR+RT
Sbjct: 223 ARGESMRSTARATKERKSRKASFNPVARESRDKARARARERT 262

[Close]
BLAST of ClCG01G005720 vs. TrEMBL
Match: B9SEI1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0705020 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 8.6e-38
Identity = 107/230 (46.52%), Postives = 138/230 (60.00%), Query Frame = 1 

Query: 18  LHFP-HPFLDDDDLFLSHFLSQQQQQQQLF-------EQEEKQDHEVDETTRKMKTKTKK 77
           L+FP   FLDD DL LS F++QQQQQ   F       E   +++H     ++K  T+T K
Sbjct: 45  LNFPVSTFLDDGDLLLSDFVTQQQQQILGFNDISLAAETNSQENHMNLAASKKATTRTNK 104

Query: 78  KKVSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFD 137
           K     +++        KR GKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFD
Sbjct: 105 KIKRSSSTASSQQPISRKRSGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFD 164

Query: 138 KASQTIEWLLLNSNSAIKDLKQTY----FSNNSGVSHGSVYSGQSSEVVS--EINNQDQE 197
           KAS+TI+WL   S +AIK+L  +Y     S++S  S  SV S   SEV+S  ++  +D  
Sbjct: 165 KASKTIDWLFTKSKAAIKELTDSYPKVKRSSDSDGSSRSVSSTSESEVMSGTKLTTEDNG 224

Query: 198 QEEAGGFTG-----------SFKDKKGRQL-RTVGREARDRARARARQRT 222
            +   G  G           S  +K  + +   + RE+RD+ARARAR+RT
Sbjct: 225 DKRGMGTEGDSFVRQQRCKESNNNKPNKPVFNLLARESRDKARARARERT 274

[Close]
BLAST of ClCG01G005720 vs. TrEMBL
Match: D2JWP6_POPNI (TCP transcription factor (Fragment) OS=Populus nigra GN=TB2 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 8.6e-38
Identity = 114/231 (49.35%), Postives = 138/231 (59.74%), Query Frame = 1 

Query: 19  HFPHPFLDDDDLFLSHFLSQQQQQQQ----------LFEQEEKQDHEV---DETTRKMKT 78
           HFP  FLDDDDL +   LSQQQQQQQ          +   E ++ + V   DE+TRK   
Sbjct: 26  HFPDLFLDDDDLLVGELLSQQQQQQQQPGVFGSNTHVLAVETQEINPVASNDESTRKFTN 85

Query: 79  KTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDM 138
              K  V   N+S++  R   +R GKKDRHSKI+TAQGPRDRRMRLSLQIARKFFDLQDM
Sbjct: 86  SKMKGNV---NTSKQPIRQ--RRTGKKDRHSKIHTAQGPRDRRMRLSLQIARKFFDLQDM 145

Query: 139 LGFDKASQTIEWLLLNSNSAIKDLKQTY--FSNNSGVSHG-SVYSGQSSEVVSEI----- 198
           LGFDKAS+TIEWL   S +AIK+L  T       S  S G SV S   SEVVS I     
Sbjct: 146 LGFDKASKTIEWLFTKSKAAIKELTDTVPKVRKCSSTSAGKSVSSTSESEVVSGIKLTPD 205

Query: 199 NNQDQEQEEA--GGFTGSFKDKKGRQL-----RTVGREARDRARARARQRT 222
            N D+   EA         K+K+ +++       V R++R++ARARAR RT
Sbjct: 206 TNGDRRVMEAKSDSLVSKPKEKRSKKVHKPVFNPVDRDSREKARARARDRT 251

[Close]
BLAST of ClCG01G005720 vs. TrEMBL
Match: L0B9K3_POPAL (TCP transcription factor (Fragment) OS=Populus alba GN=TB2 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-37
Identity = 114/232 (49.14%), Postives = 134/232 (57.76%), Query Frame = 1 

Query: 19  HFPHPFLDDDDLFLSHFLSQQQQQQQ--------------LFEQEEKQDHEVDETTRKMK 78
           HFP  FLDDDDL +   LSQQQQ QQ              +  QE       DE+TRK  
Sbjct: 26  HFPDLFLDDDDLLVGELLSQQQQLQQQQPGVFGSNTHDLAVETQEINPVASNDESTRKFN 85

Query: 79  TKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQD 138
               K  V   N+S++  R   +R GKKDRHSKI+TAQGPRDRRMRLSLQIARKFFDLQD
Sbjct: 86  NSKMKGNV---NTSKQPIRQ--RRTGKKDRHSKIHTAQGPRDRRMRLSLQIARKFFDLQD 145

Query: 139 MLGFDKASQTIEWLLLNSNSAIKDLKQTY--FSNNSGVSHG-SVYSGQSSEVVSEIN--- 198
           MLGFDKAS+TIEWL   S +AIK+L  T       S  S G SV S   SEVVS I    
Sbjct: 146 MLGFDKASKTIEWLFTKSKAAIKELTDTVPKVRKCSSTSAGKSVSSTSESEVVSGIKLTP 205

Query: 199 --NQDQEQEEA--GGFTGSFKDKKGRQL-----RTVGREARDRARARARQRT 222
             N D+   EA         K+K+ +++       V RE+R++ARARAR RT
Sbjct: 206 DINGDRRVMEAKSDSLVSKHKEKRSKKVHKPVFNPVDRESREKARARARDRT 252

[Close]
BLAST of ClCG01G005720 vs. TAIR10
Match: AT1G68800.1 (AT1G68800.1 TCP domain protein 12)

HSP 1 Score: 127.9 bits (320), Expect = 1.0e-29
Identity = 85/210 (40.48%), Postives = 113/210 (53.81%), Query Frame = 1 

Query: 19  HFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVDET---TRKMKTKTKKKK-VSG 78
           H+  P       FL  F       Q L +Q++   + V+      +K++ K K +K V G
Sbjct: 39  HYSSPSFPFSSDFLESFDESFLINQFLLQQQDVAANVVESPWKFCKKLELKKKNEKCVDG 98

Query: 79  GNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQT 138
             S     R   K+R   DRHSKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+T
Sbjct: 99  STSQEVQWRRTVKKR---DRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKT 158

Query: 139 IEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSF 198
           IEWL   S ++IK LK+   ++  G        G+       +   ++E++E      S 
Sbjct: 159 IEWLFSKSKTSIKQLKERVAASEGG--------GKD----EHLQVDEKEKDETLKLRVSK 218

Query: 199 KDKKGRQLRTVGREARDRARARARQRTLLK 225
           +  K  +     +E+R+RAR RAR+RT+ K
Sbjct: 219 RRTKTMESSFKTKESRERARKRARERTMAK 233

[Close]
BLAST of ClCG01G005720 vs. TAIR10
Match: AT1G67260.1 (AT1G67260.1 TCP family transcription factor )

HSP 1 Score: 103.6 bits (257), Expect = 2.0e-22
Identity = 65/148 (43.92%), Postives = 86/148 (58.11%), Query Frame = 1 

Query: 87  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAI 146
           K+  KKDRHSKI TAQG RDRR+RLS+ IAR+FFDLQDMLGFDKAS+T++WLL  S  AI
Sbjct: 83  KKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAI 142

Query: 147 KDLKQTYFSNNSGVSHGSVYSG-QSSEVVSEINNQDQ-----------EQEEAGGFTGSF 206
           K++ Q    NN     G++    +  E   E +N D+           E+E     T + 
Sbjct: 143 KEVVQAKNLNNDDEDFGNIGGDVEQEEEKEEDDNGDKSFVYGLSPGYGEEEVVCEATKAG 202

Query: 207 KDKKGRQLRTVGREARD-RARARARQRT 222
             KK  +LR +  +    +AR +A++RT
Sbjct: 203 IRKKKSELRNISSKGLGAKARGKAKERT 230

[Close]
BLAST of ClCG01G005720 vs. TAIR10
Match: AT3G18550.1 (AT3G18550.1 TCP family transcription factor )

HSP 1 Score: 93.6 bits (231), Expect = 2.1e-19
Identity = 68/197 (34.52%), Postives = 91/197 (46.19%), Query Frame = 1 

Query: 87  KRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAI 146
           K+  + DRHSKI TA+G RDRRMRLSL +A++ F LQDMLGFDKAS+T+EWLL  +   I
Sbjct: 144 KKPSRTDRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTVEWLLTQAKPEI 203

Query: 147 KDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQ-----------EEAGGFTG--- 206
             +  T         HG   SG  S +   + + D              ++ G  T    
Sbjct: 204 IKIATTL------SHHGCFSSGDESHIRPVLGSMDTSSDLCELASMWTVDDRGSNTNTTE 263

Query: 207 ---------SFKDKKGRQ------LRTVGREARDRARARARQRTL------LKNTSFLQP 249
                    S + K+ R       L+ + +E R +AR RA+ RT+      +K  S L  
Sbjct: 264 TRGNKVDGRSMRGKRKRPEPRTPILKKLSKEERAKARERAKGRTMEKMMMKMKGRSQLVK 323

[Close]
BLAST of ClCG01G005720 vs. TAIR10
Match: AT4G18390.1 (AT4G18390.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2)

HSP 1 Score: 85.5 bits (210), Expect = 5.7e-17
Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 1 

Query: 86  TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLL---NS 145
           ++  G KDRHSK+ T++GPRDRR+RLS+  A +F+DLQD LG+D+ S+ +EWL+    +S
Sbjct: 37  SRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIKAAEDS 96

Query: 146 NSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEINNQDQEQEEAGGFTGSFKDKKGRQL 205
            S +  L  T+F  +             ++ ++ +      +      + + K+  G  L
Sbjct: 97  ISELPSLNNTHFPTDD--------ENHQNQTLTTVAANSLSKSACSSNSDTSKNSSGLSL 156

Query: 206 RTVGREARDRARARARQRT 222
                E RD+AR RAR+RT
Sbjct: 157 SR--SELRDKARERARERT 165

[Close]
BLAST of ClCG01G005720 vs. TAIR10
Match: AT1G53230.1 (AT1G53230.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3)

HSP 1 Score: 82.8 bits (203), Expect = 3.7e-16
Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 1 

Query: 71  KVSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDK 130
           +V GG+  R  GR        KDRHSK+ TA+GPRDRR+RLS   A +F+D+QD LGFD+
Sbjct: 37  EVQGGHIVRSTGR--------KDRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDR 96

Query: 131 ASQTIEWLLLNSNSAIKDLKQ 152
            S+ ++WL+  + SAI DL Q
Sbjct: 97  PSKAVDWLITKAKSAIDDLAQ 109

[Close]
BLAST of ClCG01G005720 vs. NCBI nr
Match: gi|778708622|ref|XP_011656248.1| (PREDICTED: transcription factor TCP12 [Cucumis sativus])

HSP 1 Score: 371.3 bits (952), Expect = 1.5e-99
Identity = 219/312 (70.19%), Postives = 235/312 (75.32%), Query Frame = 1 

Query: 3   QQEQYEDQ-LINSYDDL---HFPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDHEVDE 62
           QQ+  EDQ LINSYDD    +FPHPFLDDDDLFLSHFLSQQQQ    FEQ   +D ++DE
Sbjct: 6   QQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQ---FFEQ---RDQQLDE 65

Query: 63  TTRKMKTKTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARK 122
           TT+KMK   KKKK+ G +SSRKNG + TKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARK
Sbjct: 66  TTKKMK---KKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARK 125

Query: 123 FFDLQDMLGFDKASQTIEWLLLNSNSAIKDLKQTYFSNNSGVSHGSVYSGQSSEVVSEIN 182
           FFDLQDMLGFDKAS+TIEWLLLNSNSAIKDLKQ YF   S        SGQSSEVVSEIN
Sbjct: 126 FFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSN-------SGQSSEVVSEIN 185

Query: 183 N-------------QDQEQEEAGGFTGSFKDK-KGRQLRTVGREARDRARARARQRTLLK 242
           +             Q+Q+QE+   FTG FKDK K R LRTV REARDRARARARQRTLLK
Sbjct: 186 DNNGVFNVAASNLYQEQDQEDV-AFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLK 245

Query: 243 NTSFLQPPINLD-----HHLSGNN------NNNNNTYLD-YPTFSCPN-SIFLPSPLSLP 284
           NT    PPI         HLSGNN      NNNNNTYLD YPTFSCP+ SIFLPSPL LP
Sbjct: 246 NTLLPNPPITSSISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLP 300

[Close]
BLAST of ClCG01G005720 vs. NCBI nr
Match: gi|659074615|ref|XP_008437699.1| (PREDICTED: transcription factor CYCLOIDEA [Cucumis melo])

HSP 1 Score: 199.9 bits (507), Expect = 5.9e-48
Identity = 115/160 (71.88%), Postives = 120/160 (75.00%), Query Frame = 1 

Query: 89  RGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQTIEWLLLNSNSAIKD 148
           +GKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS+TIEWLLLNSNSAIKD
Sbjct: 55  QGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKD 114

Query: 149 LKQTYFSNNSGVSHGSVYSGQSSEVVSEIN--------------NQDQEQEEAGGFTGSF 208
           LKQ YF   S        SGQSSEVVSEIN              +Q Q+QE+   FTG F
Sbjct: 115 LKQAYFFKYSN-------SGQSSEVVSEINDNNGVVNVAASNHLDQQQDQEDV-AFTGGF 174

Query: 209 KDK-KGRQLRTVGREARDRARARARQRTLLKNTSFLQPPI 234
           KDK K R LRT  REARDRARARARQRTLLKNT    PPI
Sbjct: 175 KDKIKSRTLRTGSREARDRARARARQRTLLKNTLLPNPPI 206

[Close]
BLAST of ClCG01G005720 vs. NCBI nr
Match: gi|659074615|ref|XP_008437699.1| (PREDICTED: transcription factor CYCLOIDEA [Cucumis melo])

HSP 1 Score: 67.8 bits (164), Expect = 3.5e-08
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 1 

Query: 2  YQQEQYEDQ--LINSYDD--LH-FPHPFLDDDDLFLSHFLSQQQQQQQLFEQEEKQDH 55
          +QQ+Q+ +   LINSYDD  LH FPHPFLDDDDLFLSHFLSQQQQ  +  +Q +K  H
Sbjct: 4  HQQQQHRENQILINSYDDHDLHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQGKKDRH 61


HSP 2 Score: 168.7 bits (426), Expect = 1.5e-38
Identity = 108/222 (48.65%), Postives = 131/222 (59.01%), Query Frame = 1 

Query: 19  HFPHPFLDDDD--LFLSHFLSQQQQQ-QQLFEQEEKQDHEVDETTRKMKTK--TKKKKVS 78
           H P PF+DDDD  L +SH LSQ QQQ           D E++  +   +TK  T K+K S
Sbjct: 43  HLPAPFIDDDDDGLLMSHLLSQAQQQIVGSSSNVAPPDSEINAASPMKETKKVTTKRKRS 102

Query: 79  GGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASQ 138
            GN +++      KR GKKDRHSKIYTA GPRDRRMRLSLQIARKFFDLQDMLGFDKAS+
Sbjct: 103 AGNGAKQG--IPRKRTGKKDRHSKIYTAHGPRDRRMRLSLQIARKFFDLQDMLGFDKASK 162

Query: 139 TIEWLLLNSNSAIKDLKQTYFSNNSGVSHG--SVYSGQSSEVVSEINNQDQEQEEAGGFT 198
           TIEWL   S +AIK+L   +       S G  SV S   SEVVS     +    +  G  
Sbjct: 163 TIEWLFSKSKAAIKELTDNFPGVKHSCSGGGKSVSSTSESEVVSAAKEYEDNMGDLQGVI 222

Query: 199 G----------SFKDKKGRQ--LRTVGREARDRARARARQRT 222
                      + K++K R+     V RE+RD+ARARAR+RT
Sbjct: 223 ARGESMRSTARATKERKSRKASFNPVARESRDKARARARERT 262

[Close]
BLAST of ClCG01G005720 vs. NCBI nr
Match: gi|270271317|gb|ACZ67187.1| (TCP transcription factor, partial [Populus nigra])

HSP 1 Score: 165.6 bits (418), Expect = 1.2e-37
Identity = 114/231 (49.35%), Postives = 138/231 (59.74%), Query Frame = 1 

Query: 19  HFPHPFLDDDDLFLSHFLSQQQQQQQ----------LFEQEEKQDHEV---DETTRKMKT 78
           HFP  FLDDDDL +   LSQQQQQQQ          +   E ++ + V   DE+TRK   
Sbjct: 26  HFPDLFLDDDDLLVGELLSQQQQQQQQPGVFGSNTHVLAVETQEINPVASNDESTRKFTN 85

Query: 79  KTKKKKVSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDM 138
              K  V   N+S++  R   +R GKKDRHSKI+TAQGPRDRRMRLSLQIARKFFDLQDM
Sbjct: 86  SKMKGNV---NTSKQPIRQ--RRTGKKDRHSKIHTAQGPRDRRMRLSLQIARKFFDLQDM 145

Query: 139 LGFDKASQTIEWLLLNSNSAIKDLKQTY--FSNNSGVSHG-SVYSGQSSEVVSEI----- 198
           LGFDKAS+TIEWL   S +AIK+L  T       S  S G SV S   SEVVS I     
Sbjct: 146 LGFDKASKTIEWLFTKSKAAIKELTDTVPKVRKCSSTSAGKSVSSTSESEVVSGIKLTPD 205

Query: 199 NNQDQEQEEA--GGFTGSFKDKKGRQL-----RTVGREARDRARARARQRT 222
            N D+   EA         K+K+ +++       V R++R++ARARAR RT
Sbjct: 206 TNGDRRVMEAKSDSLVSKPKEKRSKKVHKPVFNPVDRDSREKARARARDRT 251

[Close]
BLAST of ClCG01G005720 vs. NCBI nr
Match: gi|1000955049|ref|XP_002524400.2| (PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP12 [Ricinus communis])

HSP 1 Score: 165.6 bits (418), Expect = 1.2e-37
Identity = 107/230 (46.52%), Postives = 138/230 (60.00%), Query Frame = 1 

Query: 18  LHFP-HPFLDDDDLFLSHFLSQQQQQQQLF-------EQEEKQDHEVDETTRKMKTKTKK 77
           L+FP   FLDD DL LS F++QQQQQ   F       E   +++H     ++K  T+T K
Sbjct: 45  LNFPVSTFLDDGDLLLSDFVTQQQQQILGFNDISLAAETNSQENHMNLAASKKATTRTNK 104

Query: 78  KKVSGGNSSRKNGRSCTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFD 137
           K     +++        KR GKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFD
Sbjct: 105 KIKRSSSTASSQQPISRKRSGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFD 164

Query: 138 KASQTIEWLLLNSNSAIKDLKQTY----FSNNSGVSHGSVYSGQSSEVVS--EINNQDQE 197
           KAS+TI+WL   S +AIK+L  +Y     S++S  S  SV S   SEV+S  ++  +D  
Sbjct: 165 KASKTIDWLFTKSKAAIKELTDSYPKVKRSSDSDGSSRSVSSTSESEVMSGTKLTTEDNG 224

Query: 198 QEEAGGFTG-----------SFKDKKGRQL-RTVGREARDRARARARQRT 222
            +   G  G           S  +K  + +   + RE+RD+ARARAR+RT
Sbjct: 225 DKRGMGTEGDSFVRQQRCKESNNNKPNKPVFNLLARESRDKARARARERT 274

The following BLAST results are available for this feature:
BLAST of ClCG01G005720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TCP12_ARATH1.8e-2840.48Transcription factor TCP12 OS=Arabidopsis thaliana GN=TCP12 PE=2 SV=1[more]
CYCLD_ANTML3.2e-2548.91Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum ... [more]
CYCLD_ANTMA3.2e-2548.91Transcription factor CYCLOIDEA OS=Antirrhinum majus GN=CYC PE=1 SV=1[more]
CYCLD_ANTMH4.1e-2548.18Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigeru... [more]
DICH_ANTMA1.3e-2350.00Transcription factor DICHOTOMA OS=Antirrhinum majus GN=DICH PE=2 SV=1[more]
BLAST of ClCG01G005720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRR2_CUCSA1.0e-9970.19Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577450 PE=4 SV=1[more]
A0A061EB69_THECC1.0e-3848.65TCP domain protein 12, putative OS=Theobroma cacao GN=TCM_011874 PE=4 SV=1[more]
B9SEI1_RICCO8.6e-3846.52Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0705020 PE=4 SV=1[more]
D2JWP6_POPNI8.6e-3849.35TCP transcription factor (Fragment) OS=Populus nigra GN=TB2 PE=4 SV=1[more]
L0B9K3_POPAL1.1e-3749.14TCP transcription factor (Fragment) OS=Populus alba GN=TB2 PE=4 SV=1[more]
BLAST of ClCG01G005720 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68800.11.0e-2940.48 TCP domain protein 12[more]
AT1G67260.12.0e-2243.92 TCP family transcription factor [more]
AT3G18550.12.1e-1934.52 TCP family transcription factor [more]
AT4G18390.15.7e-1734.53 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2[more]
AT1G53230.13.7e-1650.62 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3[more]
BLAST of ClCG01G005720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778708622|ref|XP_011656248.1|1.5e-9970.19PREDICTED: transcription factor TCP12 [Cucumis sativus][more]
gi|659074615|ref|XP_008437699.1|5.9e-4871.88PREDICTED: transcription factor CYCLOIDEA [Cucumis melo][more]
gi|659074615|ref|XP_008437699.1|3.5e-0863.79PREDICTED: transcription factor CYCLOIDEA [Cucumis melo][more]
gi|270271317|gb|ACZ67187.1|1.2e-3749.35TCP transcription factor, partial [Populus nigra][more]
gi|1000955049|ref|XP_002524400.2|1.2e-3746.52PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP12 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005333Transcription_factor_TCP
IPR017887TF_TCP_subgr
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:2000032 regulation of secondary shoot formation
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G005720.1ClCG01G005720.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005333Transcription factor, TCPPFAMPF03634TCPcoord: 90..225
score: 3.5
IPR017887Transcription factor TCP subgroupPROFILEPS51369TCPcoord: 91..149
score: 35
NoneNo IPR availablePANTHERPTHR31072FAMILY NOT NAMEDcoord: 2..221
score: 9.3
NoneNo IPR availablePANTHERPTHR31072:SF22TRANSCRIPTION FACTOR TCP12coord: 2..221
score: 9.3