CmoCh15G014940 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G014940
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Transcription factor CYCLOIDEA
Location	Cmo_Chr15 : 10123818 .. 10124869 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACAAGACATGTTTGGTTTAGATCATGTAAACCCCAGCTCAATGGATCAACAACATGAGGAGAACTCCTCCTATCTACATTTCCCACATCCTTTTCTCGACGACGACGACCTATTTTTGACTCACTTTTTATCCCAACAACAAGAACAACAACAACAGCAACTCGTCAGTGGCGGAGATTGTTGGAAAGAACAAGACGAAGAACAAGAACAGGATAAAGCAGACGATGTTGGACATGATCATAAGCAAAATTCAGAGAAGAAAGGTAGAAGAAGCTTGGAGGTGAAGAAGAAGAAGAAGAAAGGTAGTAGTAGTAATAGTAATAGGAAAAATGGAAGCTCCACCACAAAGAGAACAGGGAAGAAGGACAGACACAGTAAGATCTGCACAGCACAGGGCCCAAGAGACCGTAGAATGAGGCTGTCCCTTCAAATTGCAAGGAAATTCTTCGACCTTCAAGACATGCTAGGCTTTGACAAAGCTAGCAAAACCATAGAGTGGCTTCTCTCACACTCAAATTCCGCCATCAAGGCTCTCAACAACAACAACAACAACAGCGGGGTTAGCCACGGCAGCGCGTGCTCCGGGTCGAGTGAGGTCGTGTCAAAACAAGACGCTGGTGGTTCCATTGGCACTCCCAAACACAAAAAGGGCAGGCAATTACAAACAATTGGTAGAGAGTCAAGGGCTAGGGCAAGAGCTAGGGCAAGAGAAAGAACAATGTTGAAGAAATCTCCACAACCCATTTGCATTTCTCAACATTATTTGAACTCAGATGAGACCCATTTGGAAGATTGCCCTAAAGTTTTTGCCTTTTCTGATGATCTCTCATCAATCCACACCTTTTTCTCAGGTAATATCACCACTTTCTTGCCCTAATTCCTTTTTCTCATTCCACATTACTCAAATTACCCTAATTTATTCATCAATTCCTCTATACAAACAAAAACCCTAATTCTTCTTCTTCTTCCTTTTGTTTAATTTATATAATAACCTAAACATTATCCAATTAGGTTTCCGCCACTAAGGTTTCGTTTGATAATCATTTA

mRNA sequence

ATGAAACAAGACATGTTTGGTTTAGATCATGTAAACCCCAGCTCAATGGATCAACAACATGAGGAGAACTCCTCCTATCTACATTTCCCACATCCTTTTCTCGACGACGACGACCTATTTTTGACTCACTTTTTATCCCAACAACAAGAACAACAACAACAGCAACTCGTCAGTGGCGGAGATTGTTGGAAAGAACAAGACGAAGAACAAGAACAGGATAAAGCAGACGATGTTGGACATGATCATAAGCAAAATTCAGAGAAGAAAGGTAGAAGAAGCTTGGAGGTGAAGAAGAAGAAGAAGAAAGGTAGTAGTAGTAATAGTAATAGGAAAAATGGAAGCTCCACCACAAAGAGAACAGGGAAGAAGGACAGACACAGTAAGATCTGCACAGCACAGGGCCCAAGAGACCGTAGAATGAGGCTGTCCCTTCAAATTGCAAGGAAATTCTTCGACCTTCAAGACATGCTAGGCTTTGACAAAGCTAGCAAAACCATAGAGTGGCTTCTCTCACACTCAAATTCCGCCATCAAGGCTCTCAACAACAACAACAACAACAGCGGGGTTAGCCACGGCAGCGCGTGCTCCGGGTCGAGTGAGGTCGTGTCAAAACAAGACGCTGGTGGTTCCATTGGCACTCCCAAACACAAAAAGGGCAGGCAATTACAAACAATTGGTAGAGAGTCAAGGGCTAGGGCAAGAGCTAGGGCAAGAGAAAGAACAATGTTGAAGAAATCTCCACAACCCATTTGCATTTCTCAACATTATTTGAACTCAGATGAGACCCATTTGGAAGATTGCCCTAAAGTTTCCGCCACTAAGGTTTCGTTTGATAATCATTTA

Coding sequence (CDS)

ATGAAACAAGACATGTTTGGTTTAGATCATGTAAACCCCAGCTCAATGGATCAACAACATGAGGAGAACTCCTCCTATCTACATTTCCCACATCCTTTTCTCGACGACGACGACCTATTTTTGACTCACTTTTTATCCCAACAACAAGAACAACAACAACAGCAACTCGTCAGTGGCGGAGATTGTTGGAAAGAACAAGACGAAGAACAAGAACAGGATAAAGCAGACGATGTTGGACATGATCATAAGCAAAATTCAGAGAAGAAAGGTAGAAGAAGCTTGGAGGTGAAGAAGAAGAAGAAGAAAGGTAGTAGTAGTAATAGTAATAGGAAAAATGGAAGCTCCACCACAAAGAGAACAGGGAAGAAGGACAGACACAGTAAGATCTGCACAGCACAGGGCCCAAGAGACCGTAGAATGAGGCTGTCCCTTCAAATTGCAAGGAAATTCTTCGACCTTCAAGACATGCTAGGCTTTGACAAAGCTAGCAAAACCATAGAGTGGCTTCTCTCACACTCAAATTCCGCCATCAAGGCTCTCAACAACAACAACAACAACAGCGGGGTTAGCCACGGCAGCGCGTGCTCCGGGTCGAGTGAGGTCGTGTCAAAACAAGACGCTGGTGGTTCCATTGGCACTCCCAAACACAAAAAGGGCAGGCAATTACAAACAATTGGTAGAGAGTCAAGGGCTAGGGCAAGAGCTAGGGCAAGAGAAAGAACAATGTTGAAGAAATCTCCACAACCCATTTGCATTTCTCAACATTATTTGAACTCAGATGAGACCCATTTGGAAGATTGCCCTAAAGTTTCCGCCACTAAGGTTTCGTTTGATAATCATTTA

Homology

[Close]

BLAST of CmoCh15G014940 vs. Swiss-Prot
Match: CYCLD_ANTMH (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigerum GN=CYC PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-23
Identity = 76/151 (50.33%), Postives = 93/151 (61.59%), Query Frame = 1


Query: 117 TKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSA 176
           TK+  KKDRHSKI T+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK SKT++WLL+ S +A
Sbjct: 74  TKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTA 133

Query: 177 IKALNNNNNNSGVSHGSACSGSSEVVSKQDAGGSIGTPKHKKGRQL-------------Q 236
           +K L  + +    S  S C    EVVS +    S     H KG+ L             Q
Sbjct: 134 VKELVQSKSTKSNS-SSPCDDCEEVVSVE----SENVTDHSKGKSLKANNKCKEAMDSHQ 193

Query: 237 TIGRESRARARARARERTMLKKSPQPICISQ 255
              +ESRA+ARARARERT  K     +CI Q
Sbjct: 194 AAAKESRAKARARARERTKEK-----MCIKQ 214

[Close]

BLAST of CmoCh15G014940 vs. Swiss-Prot
Match: CYCLD_ANTML (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum GN=CYC PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.7e-23
Identity = 77/151 (50.99%), Postives = 92/151 (60.93%), Query Frame = 1


Query: 117 TKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSA 176
           TK+  KKDRHSKI T+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK SKT++WLL+ S +A
Sbjct: 74  TKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTA 133

Query: 177 IKALNNNNNNSGVSHGSACSGSSEVVSKQDAGGSIGTPKHKKGRQL-------------Q 236
           IK L  + +    S  S C    EVVS      S     H KG+ L             Q
Sbjct: 134 IKELVQSKSTKSNS-SSPCDDCEEVVSVD----SENVTDHSKGKSLKANNKCKEAMDSHQ 193

Query: 237 TIGRESRARARARARERTMLKKSPQPICISQ 255
              +ESRA+ARARARERT  K     +CI Q
Sbjct: 194 AAAKESRAKARARARERTKEK-----MCIKQ 214

[Close]

BLAST of CmoCh15G014940 vs. Swiss-Prot
Match: CYCLD_ANTMA (Transcription factor CYCLOIDEA OS=Antirrhinum majus GN=CYC PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.7e-23
Identity = 77/151 (50.99%), Postives = 92/151 (60.93%), Query Frame = 1


Query: 117 TKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSA 176
           TK+  KKDRHSKI T+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK SKT++WLL+ S +A
Sbjct: 82  TKQAVKKDRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTA 141

Query: 177 IKALNNNNNNSGVSHGSACSGSSEVVSKQDAGGSIGTPKHKKGRQL-------------Q 236
           IK L  + +    S  S C    EVVS      S     H KG+ L             Q
Sbjct: 142 IKELVQSKSTKSNS-SSPCDDCEEVVSVD----SENVTDHSKGKSLKANNKCKEAMDSHQ 201

Query: 237 TIGRESRARARARARERTMLKKSPQPICISQ 255
              +ESRA+ARARARERT  K     +CI Q
Sbjct: 202 AAAKESRAKARARARERTKEK-----MCIKQ 222

[Close]

BLAST of CmoCh15G014940 vs. Swiss-Prot
Match: DICH_ANTMA (Transcription factor DICHOTOMA OS=Antirrhinum majus GN=DICH PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-22
Identity = 73/146 (50.00%), Postives = 89/146 (60.96%), Query Frame = 1


Query: 118 KRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAI 177
           K T KKDRHSKI   QGPRDRR+RLS+ IARKFFDLQ+MLGFDK SKT++WLL+ S  AI
Sbjct: 83  KHTPKKDRHSKINRPQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKEAI 142

Query: 178 KALNNNNNNSGVSHGSACSGSSEVV---------SKQDAGGSIGTPKHKKGRQLQTIGRE 237
           K L  + ++      S      EV+         SK  A   + + K K GR    + +E
Sbjct: 143 KELVQSKSSKSNISNSPSECDQEVLSADLPYIGSSKGKAAVGLNSNKCKGGRDAVDLAKE 202

Query: 238 SRARARARARERTMLKKSPQPICISQ 255
           SRA+ARARARERT  K     +CI Q
Sbjct: 203 SRAKARARARERTKEK-----MCIKQ 223

[Close]

BLAST of CmoCh15G014940 vs. Swiss-Prot
Match: TCP12_ARATH (Transcription factor TCP12 OS=Arabidopsis thaliana GN=TCP12 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 8.0e-21
Identity = 90/178 (50.56%), Postives = 104/178 (58.43%), Query Frame = 1


Query: 70  QEQDKADDVGHDHKQNSEKKGRRSLEVKKKKKKG-SSSNSNRKNGSSTTKRTGKKDRHSK 129
           Q+QD A +V       S  K  + LE+KKK +K    S S       T K   K+DRHSK
Sbjct: 67  QQQDVAANV-----VESPWKFCKKLELKKKNEKCVDGSTSQEVQWRRTVK---KRDRHSK 126

Query: 130 ICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAIKALNNNNNNSG 189
           ICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWL S S ++IK L        
Sbjct: 127 ICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKTSIKQL---KERVA 186

Query: 190 VSHGSACSGSSEVVSKQ-DAGGSIGTPKHK-KGRQLQTIGRESRARARARARERTMLK 245
            S G       +V  K+ D    +   K + K  +     +ESR RAR RARERTM K
Sbjct: 187 ASEGGGKDEHLQVDEKEKDETLKLRVSKRRTKTMESSFKTKESRERARKRARERTMAK 233

[Close]

BLAST of CmoCh15G014940 vs. TrEMBL
Match: A0A0A0KRR2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577450 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.7e-39
Identity = 141/307 (45.93%), Postives = 171/307 (55.70%), Query Frame = 1


Query: 18  QQHEENS---------SYLHFPHPFLDDDDLFLTHFLSQQQ---EQQQQQLVSGGDCWKE 77
           QQH+E+           + +FPHPFLDDDDLFL+HFLSQQQ   EQ+ QQL         
Sbjct: 7   QQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQL--------- 66

Query: 78  QDEEQEQDKADDVGHDHKQNSEKKGRRSLEVKKKKKKGSSSNSNRKNGSSTTKRTGKKDR 137
            DE  ++ K                      KKKK  GSSS  +RKNGS++TKR GKKDR
Sbjct: 67  -DETTKKMK----------------------KKKKLCGSSS--SRKNGSNSTKRRGKKDR 126

Query: 138 HSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAIKAL----- 197
           HSKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLL +SNSAIK L     
Sbjct: 127 HSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYF 186

Query: 198 -------------NNNNNNSGVSHGSACSGSSEVVSKQDAGGSIGTPKHKKGRQLQTIGR 257
                        +  N+N+GV    A S   +   ++D   + G     K R L+T+ R
Sbjct: 187 FKYSNSGQSSEVVSEINDNNGV-FNVAASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVAR 246

Query: 258 ESRARARARARERTMLKKS-----PQPICISQHY-------------LNSDETHLEDCPK 277
           E+R RARARAR+RT+LK +     P    ISQH+              N++ T+L+  P 
Sbjct: 247 EARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISSSSNNNNNTYLDYYPT 278

[Close]

BLAST of CmoCh15G014940 vs. TrEMBL
Match: K4BNK5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.6e-28
Identity = 113/254 (44.49%), Postives = 137/254 (53.94%), Query Frame = 1


Query: 6   FGLDHVNPSSMDQQHEENSSYLHFPHPFLDDDDLFLTHFLSQQQEQQQQQLVSGGDCWKE 65
           F  DH NPSS  +Q E+N  +L+FP PFLD ++  L+  L Q    ++  L         
Sbjct: 23  FTYDHQNPSSSSRQ-EDNPFFLNFPSPFLDHNESPLSQILPQDHHVKEGNLT-------- 82

Query: 66  QDEEQEQDKADDVGHDHKQNSEKKGRRSLEVKKKKKKGSSSNSNRKNGSSTTKRTGKKDR 125
                           H  +   K   S+E K   KK S S + R       KRTGKKDR
Sbjct: 83  ----------------HLSSETSKEEMSIEAKPSSKKRSLSTTPR-------KRTGKKDR 142

Query: 126 HSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAIKALNN--- 185
           HSKICTAQG RDRR+RLSL IARKFFDLQDMLGFDKASKTIEWL S SN+AIK L+    
Sbjct: 143 HSKICTAQGVRDRRVRLSLHIARKFFDLQDMLGFDKASKTIEWLFSKSNNAIKDLSENTP 202

Query: 186 ------------NNNNSGVSHGSACSGSSEVVSKQDAGGSIGTPKHKKGRQLQTIGRESR 245
                       N+NNS    G + S  SE   ++++   +G  K +K  Q     RESR
Sbjct: 203 QKEYSDGNKIVINSNNSSSYEGKSDSFMSE--CEENSINELGKDK-EKIMQNNPHKRESR 241

[Close]

BLAST of CmoCh15G014940 vs. TrEMBL
Match: D2JWP6_POPNI (TCP transcription factor (Fragment) OS=Populus nigra GN=TB2 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.7e-28
Identity = 122/285 (42.81%), Postives = 151/285 (52.98%), Query Frame = 1


Query: 9   DHVNPSSMDQQHEENSSYLHFPHPFLDDDDLFLTHFLSQQQEQQQQQLVSGGDCWKEQDE 68
           D  NPSS++  +   S   HFP  FLDDDDL +   LSQQQ+QQQQ  V G +      E
Sbjct: 8   DPENPSSIED-YSPTSFLQHFPDLFLDDDDLLVGELLSQQQQQQQQPGVFGSNTHVLAVE 67

Query: 69  EQEQD--KADDVGHDHKQNSEKKGRRSLEVKKKKKKGSSSNSNRKNGSSTTKRTGKKDRH 128
            QE +   ++D       NS+ KG                N N        +RTGKKDRH
Sbjct: 68  TQEINPVASNDESTRKFTNSKMKG----------------NVNTSKQPIRQRRTGKKDRH 127

Query: 129 SKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAIKALNNN--- 188
           SKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWL + S +AIK L +    
Sbjct: 128 SKIHTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFTKSKAAIKELTDTVPK 187

Query: 189 -NNNSGVSHGSACSGS--SEVVS----KQDAGGS-----------IGTPKHKKGRQL--- 248
               S  S G + S +  SEVVS      D  G            +  PK K+ +++   
Sbjct: 188 VRKCSSTSAGKSVSSTSESEVVSGIKLTPDTNGDRRVMEAKSDSLVSKPKEKRSKKVHKP 247

Query: 249 --QTIGRESRARARARARERTMLKKSPQPICISQHYLNSDETHLE 266
               + R+SR +ARARAR+RT  K   + I  S     ++  +LE
Sbjct: 248 VFNPVDRDSREKARARARDRTREKMKNKGINKSSQSSQANPDNLE 275

[Close]

BLAST of CmoCh15G014940 vs. TrEMBL
Match: B9HWM3_POPTR (Cycloidea-like protein group 1A OS=Populus trichocarpa GN=POPTR_0010s14030g PE=4 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 1.0e-27
Identity = 122/285 (42.81%), Postives = 150/285 (52.63%), Query Frame = 1


Query: 9   DHVNPSSMDQQHEENSSYLHFPHPFLDDDDLFLTHFLSQQQEQQQQQLVSGGDCWKEQDE 68
           D  NPSS++  +   S   HFP  FLDD DL +   LSQQQ+QQQQ  V G +      E
Sbjct: 25  DPENPSSIED-YSPTSFLQHFPDLFLDDGDLLVGELLSQQQQQQQQPGVFGSNTHVLAVE 84

Query: 69  EQEQDK--ADDVGHDHKQNSEKKGRRSLEVKKKKKKGSSSNSNRKNGSSTTKRTGKKDRH 128
            QE +   ++D       NS+ KG                N N        +RTGKKDRH
Sbjct: 85  TQEINPVASNDESTRKFNNSKMKG----------------NVNTSKQPIRQRRTGKKDRH 144

Query: 129 SKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAIKALNNN--- 188
           SKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWL + S +AIK L +    
Sbjct: 145 SKIHTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFTKSKAAIKELTDTVPK 204

Query: 189 -NNNSGVSHGSACSGS--SEVVS----KQDAGGS-----------IGTPKHKKGRQL--- 248
               S  S G + S +  SEVVS      D  G            +  PK K+ +++   
Sbjct: 205 VRKCSSTSAGKSVSSTSESEVVSGIKLTPDTNGDRRVMEAKSDSLVSKPKEKRSKKVHKP 264

Query: 249 --QTIGRESRARARARARERTMLKKSPQPICISQHYLNSDETHLE 266
               + RESR +ARARAR+RT  K   + I  S     ++  +LE
Sbjct: 265 VFNPVDRESREKARARARDRTREKMKNKGINKSSQSSQANPDNLE 292

[Close]

BLAST of CmoCh15G014940 vs. TrEMBL
Match: D2JWP7_POPBA (TCP transcription factor (Fragment) OS=Populus balsamifera GN=TB2 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.4e-27
Identity = 122/285 (42.81%), Postives = 150/285 (52.63%), Query Frame = 1


Query: 9   DHVNPSSMDQQHEENSSYLHFPHPFLDDDDLFLTHFLSQQQEQQQQQLVSGGDCWKEQDE 68
           D  NPSS++  +   S   HFP  FLDD DL +   LSQQQ+QQQQ  V G +      E
Sbjct: 8   DPENPSSIED-YSPTSFLQHFPDLFLDDGDLLVGEXLSQQQQQQQQPGVFGSNTHVLAVE 67

Query: 69  EQEQDK--ADDVGHDHKQNSEKKGRRSLEVKKKKKKGSSSNSNRKNGSSTTKRTGKKDRH 128
            QE +   ++D       NS+ KG                N N        +RTGKKDRH
Sbjct: 68  TQEINPVASNDESTRKFNNSKMKG----------------NVNTSKQPIRQRRTGKKDRH 127

Query: 129 SKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAIKALNNN--- 188
           SKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWL + S +AIK L +    
Sbjct: 128 SKIHTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFTKSKAAIKELTDTVPK 187

Query: 189 -NNNSGVSHGSACSGS--SEVVS----KQDAGGS-----------IGTPKHKKGRQL--- 248
               S  S G + S +  SEVVS      D  G            +  PK K+ +++   
Sbjct: 188 VRKCSSTSAGKSVSSTSESEVVSGIKLTPDTNGDRRVMEAKSDSLVSKPKEKRSKKVHKP 247

Query: 249 --QTIGRESRARARARARERTMLKKSPQPICISQHYLNSDETHLE 266
               + RESR +ARARAR+RT  K   + I  S     ++  +LE
Sbjct: 248 VFNPVDRESREKARARARDRTREKMKNKGINKSSQSSQANPDNLE 275

[Close]

BLAST of CmoCh15G014940 vs. TAIR10
Match: AT1G68800.1 (AT1G68800.1 TCP domain protein 12)

HSP 1 Score: 102.4 bits (254), Expect = 4.5e-22
Identity = 90/178 (50.56%), Postives = 104/178 (58.43%), Query Frame = 1


Query: 70  QEQDKADDVGHDHKQNSEKKGRRSLEVKKKKKKG-SSSNSNRKNGSSTTKRTGKKDRHSK 129
           Q+QD A +V       S  K  + LE+KKK +K    S S       T K   K+DRHSK
Sbjct: 67  QQQDVAANV-----VESPWKFCKKLELKKKNEKCVDGSTSQEVQWRRTVK---KRDRHSK 126

Query: 130 ICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAIKALNNNNNNSG 189
           ICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWL S S ++IK L        
Sbjct: 127 ICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKTSIKQL---KERVA 186

Query: 190 VSHGSACSGSSEVVSKQ-DAGGSIGTPKHK-KGRQLQTIGRESRARARARARERTMLK 245
            S G       +V  K+ D    +   K + K  +     +ESR RAR RARERTM K
Sbjct: 187 ASEGGGKDEHLQVDEKEKDETLKLRVSKRRTKTMESSFKTKESRERARKRARERTMAK 233

[Close]

BLAST of CmoCh15G014940 vs. TAIR10
Match: AT1G67260.1 (AT1G67260.1 TCP family transcription factor )

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-16
Identity = 69/157 (43.95%), Postives = 85/157 (54.14%), Query Frame = 1


Query: 114 SSTTKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHS 173
           S   K+  KKDRHSKI TAQG RDRR+RLS+ IAR+FFDLQDMLGFDKASKT++WLL  S
Sbjct: 79  SKEIKKVVKKDRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKS 138

Query: 174 NSAIKA------LNNNNNNSGVSHG----------------------SACSGSSEVVSKQ 233
             AIK       LNN++ + G   G                      S   G  EVV + 
Sbjct: 139 RKAIKEVVQAKNLNNDDEDFGNIGGDVEQEEEKEEDDNGDKSFVYGLSPGYGEEEVVCEA 198

Query: 234 DAGGSIGTPKHKKGRQLQTIGRES-RARARARARERT 242
              G       KK  +L+ I  +   A+AR +A+ERT
Sbjct: 199 TKAGI-----RKKKSELRNISSKGLGAKARGKAKERT 230

[Close]

BLAST of CmoCh15G014940 vs. TAIR10
Match: AT1G53230.1 (AT1G53230.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3)

HSP 1 Score: 82.8 bits (203), Expect = 3.7e-16
Identity = 38/68 (55.88%), Postives = 52/68 (76.47%), Query Frame = 1


Query: 113 GSSTTKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSH 172
           G    + TG+KDRHSK+CTA+GPRDRR+RLS   A +F+D+QD LGFD+ SK ++WL++ 
Sbjct: 40  GGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITK 99

Query: 173 SNSAIKAL 181
           + SAI  L
Sbjct: 100 AKSAIDDL 107

[Close]

BLAST of CmoCh15G014940 vs. TAIR10
Match: AT3G15030.1 (AT3G15030.1 TCP family transcription factor 4)

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-15
Identity = 36/68 (52.94%), Postives = 51/68 (75.00%), Query Frame = 1


Query: 113 GSSTTKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSH 172
           G    + TG+KDRHSK+CTA+GPRDRR+RLS   A +F+D+QD LGFD+ SK ++WL+  
Sbjct: 36  GGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKK 95

Query: 173 SNSAIKAL 181
           + ++I  L
Sbjct: 96  AKTSIDEL 103

[Close]

BLAST of CmoCh15G014940 vs. TAIR10
Match: AT4G18390.1 (AT4G18390.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2)

HSP 1 Score: 77.0 bits (188), Expect = 2.0e-14
Identity = 51/131 (38.93%), Postives = 78/131 (59.54%), Query Frame = 1


Query: 117 TKRTGKKDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSA 176
           ++ +G KDRHSK+ T++GPRDRR+RLS+  A +F+DLQD LG+D+ SK +EWL+  +  +
Sbjct: 37  SRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIKAAEDS 96

Query: 177 IKALNNNNN------NSGVSHGSACSGSSEVVSKQDAGGSIGTPKHKKGRQLQTIGRESR 236
           I  L + NN      +    + +  + ++  +SK     +  T K+  G  L     E R
Sbjct: 97  ISELPSLNNTHFPTDDENHQNQTLTTVAANSLSKSACSSNSDTSKNSSGLSLSR--SELR 156

Query: 237 ARARARARERT 242
            +AR RARERT
Sbjct: 157 DKARERARERT 165

[Close]

BLAST of CmoCh15G014940 vs. NCBI nr
Match: gi|778708622|ref|XP_011656248.1| (PREDICTED: transcription factor TCP12 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 3.8e-39
Identity = 141/307 (45.93%), Postives = 171/307 (55.70%), Query Frame = 1


Query: 18  QQHEENS---------SYLHFPHPFLDDDDLFLTHFLSQQQ---EQQQQQLVSGGDCWKE 77
           QQH+E+           + +FPHPFLDDDDLFL+HFLSQQQ   EQ+ QQL         
Sbjct: 7   QQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQL--------- 66

Query: 78  QDEEQEQDKADDVGHDHKQNSEKKGRRSLEVKKKKKKGSSSNSNRKNGSSTTKRTGKKDR 137
            DE  ++ K                      KKKK  GSSS  +RKNGS++TKR GKKDR
Sbjct: 67  -DETTKKMK----------------------KKKKLCGSSS--SRKNGSNSTKRRGKKDR 126

Query: 138 HSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAIKAL----- 197
           HSKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLL +SNSAIK L     
Sbjct: 127 HSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYF 186

Query: 198 -------------NNNNNNSGVSHGSACSGSSEVVSKQDAGGSIGTPKHKKGRQLQTIGR 257
                        +  N+N+GV    A S   +   ++D   + G     K R L+T+ R
Sbjct: 187 FKYSNSGQSSEVVSEINDNNGV-FNVAASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVAR 246

Query: 258 ESRARARARARERTMLKKS-----PQPICISQHY-------------LNSDETHLEDCPK 277
           E+R RARARAR+RT+LK +     P    ISQH+              N++ T+L+  P 
Sbjct: 247 EARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISSSSNNNNNTYLDYYPT 278

[Close]

BLAST of CmoCh15G014940 vs. NCBI nr
Match: gi|270271317|gb|ACZ67187.1| (TCP transcription factor, partial [Populus nigra])

HSP 1 Score: 133.3 bits (334), Expect = 6.8e-28
Identity = 122/285 (42.81%), Postives = 151/285 (52.98%), Query Frame = 1


Query: 9   DHVNPSSMDQQHEENSSYLHFPHPFLDDDDLFLTHFLSQQQEQQQQQLVSGGDCWKEQDE 68
           D  NPSS++  +   S   HFP  FLDDDDL +   LSQQQ+QQQQ  V G +      E
Sbjct: 8   DPENPSSIED-YSPTSFLQHFPDLFLDDDDLLVGELLSQQQQQQQQPGVFGSNTHVLAVE 67

Query: 69  EQEQD--KADDVGHDHKQNSEKKGRRSLEVKKKKKKGSSSNSNRKNGSSTTKRTGKKDRH 128
            QE +   ++D       NS+ KG                N N        +RTGKKDRH
Sbjct: 68  TQEINPVASNDESTRKFTNSKMKG----------------NVNTSKQPIRQRRTGKKDRH 127

Query: 129 SKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAIKALNNN--- 188
           SKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWL + S +AIK L +    
Sbjct: 128 SKIHTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFTKSKAAIKELTDTVPK 187

Query: 189 -NNNSGVSHGSACSGS--SEVVS----KQDAGGS-----------IGTPKHKKGRQL--- 248
               S  S G + S +  SEVVS      D  G            +  PK K+ +++   
Sbjct: 188 VRKCSSTSAGKSVSSTSESEVVSGIKLTPDTNGDRRVMEAKSDSLVSKPKEKRSKKVHKP 247

Query: 249 --QTIGRESRARARARARERTMLKKSPQPICISQHYLNSDETHLE 266
               + R+SR +ARARAR+RT  K   + I  S     ++  +LE
Sbjct: 248 VFNPVDRDSREKARARARDRTREKMKNKGINKSSQSSQANPDNLE 275

[Close]

BLAST of CmoCh15G014940 vs. NCBI nr
Match: gi|743797659|ref|XP_011008633.1| (PREDICTED: transcription factor TCP12-like [Populus euphratica])

HSP 1 Score: 132.5 bits (332), Expect = 1.2e-27
Identity = 122/285 (42.81%), Postives = 151/285 (52.98%), Query Frame = 1


Query: 9   DHVNPSSMDQQHEENSSYLHFPHPFLDDDDLFLTHFLSQQQEQQQQQLVSGGDCWKEQDE 68
           D  NPSS++  +   S   HFP  FL+DDDL +   LSQQQ+QQQQ  V G +      E
Sbjct: 25  DPENPSSIED-YSPTSFLQHFPDLFLNDDDLLVGELLSQQQQQQQQPGVFGSNTHVLAVE 84

Query: 69  EQEQDK--ADDVGHDHKQNSEKKGRRSLEVKKKKKKGSSSNSNRKNGSSTTKRTGKKDRH 128
            QE +   ++D       NS+ KG                N N        +RTGKKDRH
Sbjct: 85  TQEINPVASNDESTRKFNNSKMKG----------------NVNTSKQPIRQRRTGKKDRH 144

Query: 129 SKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAIKALNNN--- 188
           SKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWL + S +AIK L +    
Sbjct: 145 SKIHTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFTKSKAAIKELTDTVPK 204

Query: 189 -NNNSGVSHGSACSGS--SEVVS----KQDAGGS-----------IGTPKHKKGRQL--- 248
               S  S G + S +  SEVVS      D  G            +  P+ KK +++   
Sbjct: 205 VRKCSSTSAGKSVSSTSESEVVSGIKLTPDTNGDRRVMEAKSDSLVSKPQEKKSKKVHKP 264

Query: 249 --QTIGRESRARARARARERTMLKKSPQPICISQHYLNSDETHLE 266
               + RESR +ARARAR+RT  K   + I  S     ++  +LE
Sbjct: 265 VFNPVDRESREKARARARDRTREKMKNKGINKSSQSSQANPDNLE 292

[Close]

BLAST of CmoCh15G014940 vs. NCBI nr
Match: gi|566190739|ref|XP_002314886.2| (cycloidea-like protein group 1A [Populus trichocarpa])

HSP 1 Score: 132.1 bits (331), Expect = 1.5e-27
Identity = 122/285 (42.81%), Postives = 150/285 (52.63%), Query Frame = 1


Query: 9   DHVNPSSMDQQHEENSSYLHFPHPFLDDDDLFLTHFLSQQQEQQQQQLVSGGDCWKEQDE 68
           D  NPSS++  +   S   HFP  FLDD DL +   LSQQQ+QQQQ  V G +      E
Sbjct: 25  DPENPSSIED-YSPTSFLQHFPDLFLDDGDLLVGELLSQQQQQQQQPGVFGSNTHVLAVE 84

Query: 69  EQEQDK--ADDVGHDHKQNSEKKGRRSLEVKKKKKKGSSSNSNRKNGSSTTKRTGKKDRH 128
            QE +   ++D       NS+ KG                N N        +RTGKKDRH
Sbjct: 85  TQEINPVASNDESTRKFNNSKMKG----------------NVNTSKQPIRQRRTGKKDRH 144

Query: 129 SKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAIKALNNN--- 188
           SKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWL + S +AIK L +    
Sbjct: 145 SKIHTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFTKSKAAIKELTDTVPK 204

Query: 189 -NNNSGVSHGSACSGS--SEVVS----KQDAGGS-----------IGTPKHKKGRQL--- 248
               S  S G + S +  SEVVS      D  G            +  PK K+ +++   
Sbjct: 205 VRKCSSTSAGKSVSSTSESEVVSGIKLTPDTNGDRRVMEAKSDSLVSKPKEKRSKKVHKP 264

Query: 249 --QTIGRESRARARARARERTMLKKSPQPICISQHYLNSDETHLE 266
               + RESR +ARARAR+RT  K   + I  S     ++  +LE
Sbjct: 265 VFNPVDRESREKARARARDRTREKMKNKGINKSSQSSQANPDNLE 292

[Close]

BLAST of CmoCh15G014940 vs. NCBI nr
Match: gi|270271319|gb|ACZ67188.1| (TCP transcription factor, partial [Populus balsamifera])

HSP 1 Score: 132.1 bits (331), Expect = 1.5e-27
Identity = 122/285 (42.81%), Postives = 150/285 (52.63%), Query Frame = 1


Query: 9   DHVNPSSMDQQHEENSSYLHFPHPFLDDDDLFLTHFLSQQQEQQQQQLVSGGDCWKEQDE 68
           D  NPSS++  +   S   HFP  FLDD DL +   LSQQQ+QQQQ  V G +      E
Sbjct: 8   DPENPSSIED-YSPTSFLQHFPDLFLDDGDLLVGEJLSQQQQQQQQPGVFGSNTHVLAVE 67

Query: 69  EQEQDK--ADDVGHDHKQNSEKKGRRSLEVKKKKKKGSSSNSNRKNGSSTTKRTGKKDRH 128
            QE +   ++D       NS+ KG                N N        +RTGKKDRH
Sbjct: 68  TQEINPVASNDESTRKFNNSKMKG----------------NVNTSKQPIRQRRTGKKDRH 127

Query: 129 SKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLSHSNSAIKALNNN--- 188
           SKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWL + S +AIK L +    
Sbjct: 128 SKIHTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFTKSKAAIKELTDTVPK 187

Query: 189 -NNNSGVSHGSACSGS--SEVVS----KQDAGGS-----------IGTPKHKKGRQL--- 248
               S  S G + S +  SEVVS      D  G            +  PK K+ +++   
Sbjct: 188 VRKCSSTSAGKSVSSTSESEVVSGIKLTPDTNGDRRVMEAKSDSLVSKPKEKRSKKVHKP 247

Query: 249 --QTIGRESRARARARARERTMLKKSPQPICISQHYLNSDETHLE 266
               + RESR +ARARAR+RT  K   + I  S     ++  +LE
Sbjct: 248 VFNPVDRESREKARARARDRTREKMKNKGINKSSQSSQANPDNLE 275

The following BLAST results are available for this feature:

BLAST of CmoCh15G014940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CYCLD_ANTMH	1.3e-23	50.33	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigeru...	[more]
CYCLD_ANTML	1.7e-23	50.99	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum ...	[more]
CYCLD_ANTMA	1.7e-23	50.99	Transcription factor CYCLOIDEA OS=Antirrhinum majus GN=CYC PE=1 SV=1	[more]
DICH_ANTMA	1.9e-22	50.00	Transcription factor DICHOTOMA OS=Antirrhinum majus GN=DICH PE=2 SV=1	[more]
TCP12_ARATH	8.0e-21	50.56	Transcription factor TCP12 OS=Arabidopsis thaliana GN=TCP12 PE=2 SV=1	[more]

BLAST of CmoCh15G014940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRR2_CUCSA	2.7e-39	45.93	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577450 PE=4 SV=1	[more]
K4BNK5_SOLLC	3.6e-28	44.49	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
D2JWP6_POPNI	4.7e-28	42.81	TCP transcription factor (Fragment) OS=Populus nigra GN=TB2 PE=4 SV=1	[more]
B9HWM3_POPTR	1.0e-27	42.81	Cycloidea-like protein group 1A OS=Populus trichocarpa GN=POPTR_0010s14030g PE=4...	[more]
D2JWP7_POPBA	1.4e-27	42.81	TCP transcription factor (Fragment) OS=Populus balsamifera GN=TB2 PE=4 SV=1	[more]

BLAST of CmoCh15G014940 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68800.1	4.5e-22	50.56	TCP domain protein 12	[more]
AT1G67260.1	1.3e-16	43.95	TCP family transcription factor	[more]
AT1G53230.1	3.7e-16	55.88	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3	[more]
AT3G15030.1	1.4e-15	52.94	TCP family transcription factor 4	[more]
AT4G18390.1	2.0e-14	38.93	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2	[more]

BLAST of CmoCh15G014940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778708622\|ref\|XP_011656248.1\|	3.8e-39	45.93	PREDICTED: transcription factor TCP12 [Cucumis sativus]	[more]
gi\|270271317\|gb\|ACZ67187.1\|	6.8e-28	42.81	TCP transcription factor, partial [Populus nigra]	[more]
gi\|743797659\|ref\|XP_011008633.1\|	1.2e-27	42.81	PREDICTED: transcription factor TCP12-like [Populus euphratica]	[more]
gi\|566190739\|ref\|XP_002314886.2\|	1.5e-27	42.81	cycloidea-like protein group 1A [Populus trichocarpa]	[more]
gi\|270271319\|gb\|ACZ67188.1\|	1.5e-27	42.81	TCP transcription factor, partial [Populus balsamifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005333	Transcription_factor_TCP
IPR017887	TF_TCP_subgr
IPR017888	CYC/TB1_R_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000032	regulation of secondary shoot formation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G014940.1	CmoCh15G014940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 120..245 score: 9.0
IPR017887	Transcription factor TCP subgroup	PROFILE	PS51369	TCP	coord: 122..180 score: 36
IPR017888	CYC/TB1, R domain	PROFILE	PS51370	R	coord: 227..244 score: 10
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 11..244 score: 2.5
None	No IPR available	PANTHER	PTHR31072:SF22	TRANSCRIPTION FACTOR TCP12	coord: 11..244 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G014940	CmaCh15G014160	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G014940	Cla002323	Watermelon (97103) v1	cmowmB264
CmoCh15G014940	MELO3C005358	Melon (DHL92) v3.5.1	cmomeB244
CmoCh15G014940	ClCG01G005720	Watermelon (Charleston Gray)	cmowcgB244
CmoCh15G014940	Lsi09G006020	Bottle gourd (USVL1VR-Ls)	cmolsiB248
CmoCh15G014940	Cp4.1LG13g00270	Cucurbita pepo (Zucchini)	cmocpeB269
CmoCh15G014940	MELO3C005358.2	Melon (DHL92) v3.6.1	cmomedB277
CmoCh15G014940	Cla97C01G005990	Watermelon (97103) v2	cmowmbB267
CmoCh15G014940	Bhi12G000708	Wax gourd	cmowgoB0364
CmoCh15G014940	Carg20762	Silver-seed gourd	carcmoB1004

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None