CsGy5G019710 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G019710
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	transcription factor CYCLOIDEA
Location	Chr5 : 26044581 .. 26045483 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGATCATCAACAACAACAACATCAAGAGGATCAAATCCTCATCAACTCATATGATGATCATGATTTTCATTATTTCCCACATCCTTTTCTTGATGACGACGACCTATTTTTAAGCCATTTTCTATCACAACAACAACAATTCTTCGAACAACGAGATCAGCAACTTGACGAAACGACGAAAAAGATGAAGAAGAAGAAGAAATTGTGTGGAAGTAGTAGTAGTAGAAAAAATGGGAGCAACTCTACAAAGAGAAGAGGGAAGAAGGATAGACATAGTAAGATCTACACAGCACAAGGCCCAAGAGACCGTAGAATGAGGCTGTCCCTTCAAATTGCAAGGAAATTCTTTGATCTTCAAGACATGCTAGGCTTTGACAAAGCTAGTAAAACTATAGAGTGGCTTCTTCTTAACTCAAATTCAGCCATTAAAGATCTCAAACAAGCCTACTTCTTTAAGTACTCAAATTCTGGCCAATCAAGTGAGGTTGTGTCAGAGATTAATGATAACAATGGTGTTTTTAATGTTGCTGCTTCTAATCTATATCAAGAACAAGATCAAGAAGATGTTGCGTTTACGGGCGGTTTTAAAGACAAGATCAAAAGCAGGACGTTACGAACCGTTGCGAGAGAGGCGAGGGATAGGGCGAGAGCTAGGGCAAGACAAAGAACACTCTTGAAAAATACTTTACTACCAAACCCTCCTATTACTTCTTCCATTTCTCAACATTTTGATCATCTCTCAGGTAATAACAATATTAGTAGTAGTAGTAATAATAATAATAATACCTATCTTGATTATTATCCTACATTTTCTTGCCCTAGTACTTCCATTTTCCTTCCTTCTCCACTTCCCTTACCCTACTCTTTTACTGATTCCACATTACTTAAATTGCCCTAA

mRNA sequence

ATGGATGATCATCAACAACAACAACATCAAGAGGATCAAATCCTCATCAACTCATATGATGATCATGATTTTCATTATTTCCCACATCCTTTTCTTGATGACGACGACCTATTTTTAAGCCATTTTCTATCACAACAACAACAATTCTTCGAACAACGAGATCAGCAACTTGACGAAACGACGAAAAAGATGAAGAAGAAGAAGAAATTGTGTGGAAGTAGTAGTAGTAGAAAAAATGGGAGCAACTCTACAAAGAGAAGAGGGAAGAAGGATAGACATAGTAAGATCTACACAGCACAAGGCCCAAGAGACCGTAGAATGAGGCTGTCCCTTCAAATTGCAAGGAAATTCTTTGATCTTCAAGACATGCTAGGCTTTGACAAAGCTAGTAAAACTATAGAGTGGCTTCTTCTTAACTCAAATTCAGCCATTAAAGATCTCAAACAAGCCTACTTCTTTAAGTACTCAAATTCTGGCCAATCAAGTGAGGTTGTGTCAGAGATTAATGATAACAATGGTGTTTTTAATGTTGCTGCTTCTAATCTATATCAAGAACAAGATCAAGAAGATGTTGCGTTTACGGGCGGTTTTAAAGACAAGATCAAAAGCAGGACGTTACGAACCGTTGCGAGAGAGGCGAGGGATAGGGCGAGAGCTAGGGCAAGACAAAGAACACTCTTGAAAAATACTTTACTACCAAACCCTCCTATTACTTCTTCCATTTCTCAACATTTTGATCATCTCTCAGGTAATAACAATATTAGTAGTAGTAGTAATAATAATAATAATACCTATCTTGATTATTATCCTACATTTTCTTGCCCTAGTACTTCCATTTTCCTTCCTTCTCCACTTCCCTTACCCTACTCTTTTACTGATTCCACATTACTTAAATTGCCCTAA

Coding sequence (CDS)

ATGGATGATCATCAACAACAACAACATCAAGAGGATCAAATCCTCATCAACTCATATGATGATCATGATTTTCATTATTTCCCACATCCTTTTCTTGATGACGACGACCTATTTTTAAGCCATTTTCTATCACAACAACAACAATTCTTCGAACAACGAGATCAGCAACTTGACGAAACGACGAAAAAGATGAAGAAGAAGAAGAAATTGTGTGGAAGTAGTAGTAGTAGAAAAAATGGGAGCAACTCTACAAAGAGAAGAGGGAAGAAGGATAGACATAGTAAGATCTACACAGCACAAGGCCCAAGAGACCGTAGAATGAGGCTGTCCCTTCAAATTGCAAGGAAATTCTTTGATCTTCAAGACATGCTAGGCTTTGACAAAGCTAGTAAAACTATAGAGTGGCTTCTTCTTAACTCAAATTCAGCCATTAAAGATCTCAAACAAGCCTACTTCTTTAAGTACTCAAATTCTGGCCAATCAAGTGAGGTTGTGTCAGAGATTAATGATAACAATGGTGTTTTTAATGTTGCTGCTTCTAATCTATATCAAGAACAAGATCAAGAAGATGTTGCGTTTACGGGCGGTTTTAAAGACAAGATCAAAAGCAGGACGTTACGAACCGTTGCGAGAGAGGCGAGGGATAGGGCGAGAGCTAGGGCAAGACAAAGAACACTCTTGAAAAATACTTTACTACCAAACCCTCCTATTACTTCTTCCATTTCTCAACATTTTGATCATCTCTCAGGTAATAACAATATTAGTAGTAGTAGTAATAATAATAATAATACCTATCTTGATTATTATCCTACATTTTCTTGCCCTAGTACTTCCATTTTCCTTCCTTCTCCACTTCCCTTACCCTACTCTTTTACTGATTCCACATTACTTAAATTGCCCTAA

Protein sequence

MDDHQQQQHQEDQILINSYDDHDFHYFPHPFLDDDDLFLSHFLSQQQQFFEQRDQQLDETTKKMKKKKKLCGSSSSRKNGSNSTKRRGKKDRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDRARARARQRTLLKNTLLPNPPITSSISQHFDHLSGNNNISSSSNNNNNTYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP

Homology

[Close]

BLAST of CsGy5G019710 vs. NCBI nr
Match: XP_011656248.1 (PREDICTED: transcription factor TCP12 [Cucumis sativus] >KGN51554.1 hypothetical protein Csa_5G577450 [Cucumis sativus])

HSP 1 Score: 377.5 bits (968), Expect = 4.3e-101
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MDDHQXXXXXXXXXXXNSYDDHDFHYFPHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MDDHQXXXXXXXXXXXNSYDDHDFHYFPHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MDDHQXXXXXXXXXXXNSYDDHDFHYFPHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRHSKIYTAQGPRDRRMRLSLQIARKFFDL 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRHSKIYTAQGPRDRRMRLSLQIARKFFDL
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRHSKIYTAQGPRDRRMRLSLQIARKFFDL 120

Query: 121 QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAAS 180
           QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAAS
Sbjct: 121 QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAAS 180

Query: 181 NLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDXXXXXXXXXTLLKNTLLPNPPITSS 240
           NLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDXXXXXXXXXTLLKNTLLPNPPITSS
Sbjct: 181 NLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDXXXXXXXXXTLLKNTLLPNPPITSS 240

Query: 241 ISQHFDHLSGXXXXXXXXXXXXXXYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP 300
           ISQHFDHLSGXXXXXXXXXXXXXXYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP
Sbjct: 241 ISQHFDHLSGXXXXXXXXXXXXXXYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP 300

[Close]

BLAST of CsGy5G019710 vs. NCBI nr
Match: XP_016903718.1 (PREDICTED: transcription factor CYCLOIDEA [Cucumis melo])

HSP 1 Score: 242.7 bits (618), Expect = 1.6e-60
Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 107 MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVS 166
           MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVS
Sbjct: 1   MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVS 60

Query: 167 EINDNNGVFNVAASN-LYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDXXXXXXXXXT 226
           EINDNNGV NVAASN L Q+QDQEDVAFTGGFKDKIKSRTLRT +REARDXXXXXXXXXT
Sbjct: 61  EINDNNGVVNVAASNHLDQQQDQEDVAFTGGFKDKIKSRTLRTGSREARDXXXXXXXXXT 120

Query: 227 LLKNTLLPNPPITSSISQHFDHLS 250
           LLKNTLLPNPPITSSISQHFDHLS
Sbjct: 121 LLKNTLLPNPPITSSISQHFDHLS 144

[Close]

BLAST of CsGy5G019710 vs. NCBI nr
Match: XP_022974210.1 (transcription factor CYCLOIDEA-like [Cucurbita maxima])

HSP 1 Score: 118.2 bits (295), Expect = 4.7e-23
Identity = 84/143 (58.74%), Postives = 92/143 (64.34%), Query Frame = 0


Query: 91  DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQA 150
           DRHSKIYTAQGPRDRR+RLSLQIARKFFDLQDMLGFDKAS TIEWLL NS SAIKDL+ +
Sbjct: 110 DRHSKIYTAQGPRDRRIRLSLQIARKFFDLQDMLGFDKASNTIEWLLSNSTSAIKDLQHS 169

Query: 151 YFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVA 210
                +NSG     V        V  +              AF    K K +SR LR V 
Sbjct: 170 L---ANNSGHRYGSVC-CGSTEAVSEMIRDXXXXXXXXXXXAFMATPKHK-QSRALRRVG 229

Query: 211 REARDXXXXXXXXXTLLKNTLLP 234
           RE+RD XXXXXXXXT+LK T  P
Sbjct: 230 RESRDRXXXXXXXXTMLKKTKQP 247

[Close]

BLAST of CsGy5G019710 vs. NCBI nr
Match: XP_009336654.1 (PREDICTED: transcription factor TCP18 [Pyrus x bretschneideri])

HSP 1 Score: 117.9 bits (294), Expect = 6.1e-23
Identity = 70/129 (54.26%), Postives = 83/129 (64.34%), Query Frame = 0


Query: 91  DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQA 150
           DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWL   S +AIKDLKQ 
Sbjct: 164 DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFTKSKTAIKDLKQH 223

Query: 151 YFF--KYSNSGQSSEVVSEINDNNGVFNVAASNL---YQEQDQEDVAFTGGFKDKIKSRT 210
                K   S  +    +++N +       AS +   Y    + D++   G   + K+R 
Sbjct: 224 LLVSPKEDYSSTNGGATAKVNSSESTTGDVASKIMEPYSSAAKGDISV--GLAREKKNRK 283

Query: 211 LRTVAREAR 215
           L  VARE+R
Sbjct: 284 LSVVARESR 290

[Close]

BLAST of CsGy5G019710 vs. NCBI nr
Match: XP_022930117.1 (transcription factor TCP12-like [Cucurbita moschata])

HSP 1 Score: 117.5 bits (293), Expect = 8.0e-23
Identity = 84/143 (58.74%), Postives = 91/143 (63.64%), Query Frame = 0


Query: 91  DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQA 150
           DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKAS TIEWLL NS SAIKDL+ +
Sbjct: 108 DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASNTIEWLLSNSTSAIKDLQHS 167

Query: 151 YFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDKIKSRTLRTVA 210
                +NSG     V        V  +              AF    K K +SR LR V 
Sbjct: 168 L---ANNSGHRYGSVC-CGSTEAVSEMIRDXXXXXXXXXXXAFMATPKHK-QSRALRRVG 227

Query: 211 REARDXXXXXXXXXTLLKNTLLP 234
           RE+RD XXXXXXXXT+LK    P
Sbjct: 228 RESRDRXXXXXXXXTMLKKIKQP 245

[Close]

BLAST of CsGy5G019710 vs. TAIR10
Match: AT1G68800.1 (TCP domain protein 12)

HSP 1 Score: 102.1 bits (253), Expect = 6.3e-22
Identity = 50/59 (84.75%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 91  DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQ 150
           DRHSKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWL   S ++IK LK+
Sbjct: 114 DRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKTSIKQLKE 172

[Close]

BLAST of CsGy5G019710 vs. TAIR10
Match: AT1G67260.1 (TCP family transcription factor )

HSP 1 Score: 92.4 bits (228), Expect = 5.0e-19
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 91  DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQA 150
           DRHSKI TAQG RDRR+RLS+ IAR+FFDLQDMLGFDKASKT++WLL  S  AIK++ QA
Sbjct: 89  DRHSKIQTAQGIRDRRVRLSIGIARQFFDLQDMLGFDKASKTLDWLLKKSRKAIKEVVQA 148

[Close]

BLAST of CsGy5G019710 vs. TAIR10
Match: AT3G18550.1 (TCP family transcription factor )

HSP 1 Score: 80.5 bits (197), Expect = 2.0e-15
Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 0


Query: 91  DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAI 145
           DRHSKI TA+G RDRRMRLSL +A++ F LQDMLGFDKASKT+EWLL  +   I
Sbjct: 150 DRHSKIKTAKGTRDRRMRLSLDVAKELFGLQDMLGFDKASKTVEWLLTQAKPEI 203

[Close]

BLAST of CsGy5G019710 vs. TAIR10
Match: AT1G53230.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-14
Identity = 35/59 (59.32%), Postives = 46/59 (77.97%), Query Frame = 0


Query: 91  DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQ 150
           DRHSK+ TA+GPRDRR+RLS   A +F+D+QD LGFD+ SK ++WL+  + SAI DL Q
Sbjct: 51  DRHSKVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKSAIDDLAQ 109

[Close]

BLAST of CsGy5G019710 vs. TAIR10
Match: AT4G18390.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2)

HSP 1 Score: 73.2 bits (178), Expect = 3.1e-13
Identity = 31/57 (54.39%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 91  DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDL 148
           DRHSK+ T++GPRDRR+RLS+  A +F+DLQD LG+D+ SK +EWL+  +  +I +L
Sbjct: 44  DRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIKAAEDSISEL 100

[Close]

BLAST of CsGy5G019710 vs. Swiss-Prot
Match: sp|A0AQW4|TCP12_ARATH (Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.1e-20
Identity = 50/59 (84.75%), Postives = 53/59 (89.83%), Query Frame = 0


Query: 91  DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQ 150
           DRHSKI TAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWL   S ++IK LK+
Sbjct: 114 DRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKTSIKQLKE 172

[Close]

BLAST of CsGy5G019710 vs. Swiss-Prot
Match: sp|O49250|CYCLD_ANTMA (Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.6e-19
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 91  DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQA 150
           DRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK SKT++WLL  S +AIK+L Q+
Sbjct: 89  DRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELVQS 148

Query: 151 YFFKYSNSG---QSSEVVSEINDN 172
              K ++S       EVVS  ++N
Sbjct: 149 KSTKSNSSSPCDDCEEVVSVDSEN 172

[Close]

BLAST of CsGy5G019710 vs. Swiss-Prot
Match: sp|Q9SBV6|CYCLD_ANTML (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum OX=102601 GN=CYC PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.6e-19
Identity = 52/84 (61.90%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 91  DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQA 150
           DRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK SKT++WLL  S +AIK+L Q+
Sbjct: 81  DRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAIKELVQS 140

Query: 151 YFFKYSNSG---QSSEVVSEINDN 172
              K ++S       EVVS  ++N
Sbjct: 141 KSTKSNSSSPCDDCEEVVSVDSEN 164

[Close]

BLAST of CsGy5G019710 vs. Swiss-Prot
Match: sp|Q9SBV9|CYCLD_ANTMH (Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigerum OX=102600 GN=CYC PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.1e-19
Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 0


Query: 91  DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQA 150
           DRHSKIYT+QGPRDRR+RLS+ IARKFFDLQ+MLGFDK SKT++WLL  S +A+K+L Q+
Sbjct: 81  DRHSKIYTSQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKTAVKELVQS 140

Query: 151 YFFKYSNSG---QSSEVVSEINDN 172
              K ++S       EVVS  ++N
Sbjct: 141 KSTKSNSSSPCDDCEEVVSVESEN 164

[Close]

BLAST of CsGy5G019710 vs. Swiss-Prot
Match: sp|Q9SNW8|DICH_ANTMA (Transcription factor DICHOTOMA OS=Antirrhinum majus OX=4151 GN=DICH PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.3e-18
Identity = 48/78 (61.54%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 91  DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQA 150
           DRHSKI   QGPRDRR+RLS+ IARKFFDLQ+MLGFDK SKT++WLL  S  AIK+L Q+
Sbjct: 89  DRHSKINRPQGPRDRRVRLSIGIARKFFDLQEMLGFDKPSKTLDWLLTKSKEAIKELVQS 148

Query: 151 YFFKYSNSGQSSEVVSEI 169
              K + S   SE   E+
Sbjct: 149 KSSKSNISNSPSECDQEV 166

[Close]

BLAST of CsGy5G019710 vs. TrEMBL
Match: tr|A0A0A0KRR2|A0A0A0KRR2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G577450 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 2.8e-101
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1   MDDHQXXXXXXXXXXXNSYDDHDFHYFPHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MDDHQXXXXXXXXXXXNSYDDHDFHYFPHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MDDHQXXXXXXXXXXXNSYDDHDFHYFPHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRHSKIYTAQGPRDRRMRLSLQIARKFFDL 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRHSKIYTAQGPRDRRMRLSLQIARKFFDL
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRHSKIYTAQGPRDRRMRLSLQIARKFFDL 120

Query: 121 QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAAS 180
           QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAAS
Sbjct: 121 QDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVSEINDNNGVFNVAAS 180

Query: 181 NLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDXXXXXXXXXTLLKNTLLPNPPITSS 240
           NLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDXXXXXXXXXTLLKNTLLPNPPITSS
Sbjct: 181 NLYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDXXXXXXXXXTLLKNTLLPNPPITSS 240

Query: 241 ISQHFDHLSGXXXXXXXXXXXXXXYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP 300
           ISQHFDHLSGXXXXXXXXXXXXXXYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP
Sbjct: 241 ISQHFDHLSGXXXXXXXXXXXXXXYLDYYPTFSCPSTSIFLPSPLPLPYSFTDSTLLKLP 300

[Close]

BLAST of CsGy5G019710 vs. TrEMBL
Match: tr|A0A1S4E661|A0A1S4E661_CUCME (transcription factor CYCLOIDEA OS=Cucumis melo OX=3656 GN=LOC103483044 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60
Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 107 MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVS 166
           MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVS
Sbjct: 1   MRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQAYFFKYSNSGQSSEVVS 60

Query: 167 EINDNNGVFNVAASN-LYQEQDQEDVAFTGGFKDKIKSRTLRTVAREARDXXXXXXXXXT 226
           EINDNNGV NVAASN L Q+QDQEDVAFTGGFKDKIKSRTLRT +REARDXXXXXXXXXT
Sbjct: 61  EINDNNGVVNVAASNHLDQQQDQEDVAFTGGFKDKIKSRTLRTGSREARDXXXXXXXXXT 120

Query: 227 LLKNTLLPNPPITSSISQHFDHLS 250
           LLKNTLLPNPPITSSISQHFDHLS
Sbjct: 121 LLKNTLLPNPPITSSISQHFDHLS 144

[Close]

BLAST of CsGy5G019710 vs. TrEMBL
Match: tr|M5Y108|M5Y108_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa016240mg PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.1e-20
Identity = 68/132 (51.52%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 91  DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQ- 150
           DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWL   S ++IK+LKQ 
Sbjct: 40  DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFTKSKTSIKELKQH 99

Query: 151 -------AYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDKIK 210
                  AY                        N   ++  QE    DV   G  + + K
Sbjct: 100 LNISPLAAYSCXXXXXXXXXXXXXXXXXXXXXENSEVASKIQETANGDVHSIGTLEREKK 159

Query: 211 SRTLRTVAREAR 215
           +R L  VARE+R
Sbjct: 160 NRKLCVVARESR 171

[Close]

BLAST of CsGy5G019710 vs. TrEMBL
Match: tr|A0A251R883|A0A251R883_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G304700 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.1e-20
Identity = 68/132 (51.52%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 91  DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQ- 150
           DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWL   S ++IK+LKQ 
Sbjct: 172 DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFTKSKTSIKELKQH 231

Query: 151 -------AYFFKYSNSGQSSEVVSEINDNNGVFNVAASNLYQEQDQEDVAFTGGFKDKIK 210
                  AY                        N   ++  QE    DV   G  + + K
Sbjct: 232 LNISPLAAYSCXXXXXXXXXXXXXXXXXXXXXENSEVASKIQETANGDVHSIGTLEREKK 291

Query: 211 SRTLRTVAREAR 215
           +R L  VARE+R
Sbjct: 292 NRKLCVVARESR 303

[Close]

BLAST of CsGy5G019710 vs. TrEMBL
Match: tr|G0Y2L2|G0Y2L2_BUXSE (CYC-like protein 2 (Fragment) OS=Buxus sempervirens OX=4002 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 3.2e-20
Identity = 64/126 (50.79%), Postives = 82/126 (65.08%), Query Frame = 0


Query: 91  DRHSKIYTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLLLNSNSAIKDLKQA 150
           DRHSKIYTAQGPRDRRMRLSL IARKFFDLQDMLGFDKAS+T+EWLL  S +A K+LK  
Sbjct: 15  DRHSKIYTAQGPRDRRMRLSLDIARKFFDLQDMLGFDKASRTVEWLLTKSKAASKELKSV 74

Query: 151 YFFKYSNSG--QSSEVVSEINDNNGVFNVAASNLYQE-QDQEDVAFTGGFKDKIKSRTLR 210
              K++ +G  +SS   SE    +GV     +  ++        +  G  K+K   ++ R
Sbjct: 75  PQIKHNCTGGTKSSSSTSECEVESGVEETFNNGDHKPGTGSRGKSLVGLAKEKKTKQSRR 134

Query: 211 TVAREA 214
            +ARE+
Sbjct: 135 PLARES 140

The following BLAST results are available for this feature:

BLAST of CsGy5G019710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656248.1	4.3e-101	100.00	PREDICTED: transcription factor TCP12 [Cucumis sativus] >KGN51554.1 hypothetical...	[more]
XP_016903718.1	1.6e-60	95.83	PREDICTED: transcription factor CYCLOIDEA [Cucumis melo]	[more]
XP_022974210.1	4.7e-23	58.74	transcription factor CYCLOIDEA-like [Cucurbita maxima]	[more]
XP_009336654.1	6.1e-23	54.26	PREDICTED: transcription factor TCP18 [Pyrus x bretschneideri]	[more]
XP_022930117.1	8.0e-23	58.74	transcription factor TCP12-like [Cucurbita moschata]	[more]

BLAST of CsGy5G019710 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68800.1	6.3e-22	84.75	TCP domain protein 12	[more]
AT1G67260.1	5.0e-19	75.00	TCP family transcription factor	[more]
AT3G18550.1	2.0e-15	70.37	TCP family transcription factor	[more]
AT1G53230.1	1.3e-14	59.32	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3	[more]
AT4G18390.1	3.1e-13	54.39	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2	[more]

BLAST of CsGy5G019710 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A0AQW4\|TCP12_ARATH	1.1e-20	84.75	Transcription factor TCP12 OS=Arabidopsis thaliana OX=3702 GN=TCP12 PE=2 SV=1	[more]
sp\|O49250\|CYCLD_ANTMA	1.6e-19	61.90	Transcription factor CYCLOIDEA OS=Antirrhinum majus OX=4151 GN=CYC PE=1 SV=1	[more]
sp\|Q9SBV6\|CYCLD_ANTML	1.6e-19	61.90	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. linkianum ...	[more]
sp\|Q9SBV9\|CYCLD_ANTMH	2.1e-19	60.71	Transcription factor CYCLOIDEA (Fragment) OS=Antirrhinum majus subsp. cirrhigeru...	[more]
sp\|Q9SNW8\|DICH_ANTMA	5.3e-18	61.54	Transcription factor DICHOTOMA OS=Antirrhinum majus OX=4151 GN=DICH PE=2 SV=1	[more]

BLAST of CsGy5G019710 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KRR2\|A0A0A0KRR2_CUCSA	2.8e-101	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G577450 PE=4 SV=1	[more]
tr\|A0A1S4E661\|A0A1S4E661_CUCME	1.1e-60	95.83	transcription factor CYCLOIDEA OS=Cucumis melo OX=3656 GN=LOC103483044 PE=4 SV=1	[more]
tr\|M5Y108\|M5Y108_PRUPE	1.1e-20	51.52	Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa016240m...	[more]
tr\|A0A251R883\|A0A251R883_PRUPE	1.1e-20	51.52	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G304700 PE=4 SV=1	[more]
tr\|G0Y2L2\|G0Y2L2_BUXSE	3.2e-20	50.79	CYC-like protein 2 (Fragment) OS=Buxus sempervirens OX=4002 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017887	TF_TCP_subgr
IPR005333	Transcription_factor_TCP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G019710.1	CsGy5G019710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 88..229 e-value: 1.0E-39 score: 136.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..101
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 7..228
None	No IPR available	PANTHER	PTHR31072:SF22	TRANSCRIPTION FACTOR TCP12	coord: 7..228
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 89..147 score: 35.487

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G019710	Cla002323	Watermelon (97103) v1	cgybwmB392
CsGy5G019710	Csa5G577450	Cucumber (Chinese Long) v2	cgybcuB223
CsGy5G019710	MELO3C005358	Melon (DHL92) v3.5.1	cgybmeB293
CsGy5G019710	ClCG01G005720	Watermelon (Charleston Gray)	cgybwcgB340
CsGy5G019710	CSPI05G20170	Wild cucumber (PI 183967)	cgybcpiB225
CsGy5G019710	Lsi09G006020	Bottle gourd (USVL1VR-Ls)	cgyblsiB301
CsGy5G019710	MELO3C012212.2	Melon (DHL92) v3.6.1	cgybmedB328
CsGy5G019710	MELO3C005358.2	Melon (DHL92) v3.6.1	cgybmedB293
CsGy5G019710	CsaV3_5G028970	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G019710	Cla97C01G005990	Watermelon (97103) v2	cgybwmbB327
CsGy5G019710	Cla97C05G104950	Watermelon (97103) v2	cgybwmbB369
CsGy5G019710	Bhi12G000708	Wax gourd	cgybwgoB426
CsGy5G019710	Bhi07G001142	Wax gourd	cgybwgoB497

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None