Carg26259 (gene) Silver-seed gourd

Overview
NameCarg26259
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCCR4-associated factor 1 like
LocationCucurbita_argyrosperma_scaffold_150 : 151102 .. 151944 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAGCCACGATCTCAACGACAATCACTACAAATCCATCAAAATCCGTGAAGTTTGGGCCTCCAATCTCGAATCTGAGTTCCAGTTGATCCGCGATTCGATCGATCACTTTCCTTGCGTTTCAATGGACACTGAGTTCCCCGGAATCGTTTTCACCGCTCCAACCGCGCCTTTCAACGCTCTAAATCGCTCCTCCTCTGATCACTACAAACTCCTCAAATCCAACGTCGATGCTCTCAATCTCATACAGATCGGTATCACTCTCTCCGATTCCGATGGAAATTTACCAGATCTCGGCACCGATGATAGCCGATTCATTTGGGAGTTTAACTTCATGGATTTCGATCTAGCGCGTGACATCTACGCGCCTGATTCAATCGACCTTCTCCGCCGTCAGGGCATCGATTTTGACCGGAACCGCGTGGAAGGAATCGACTCGTGCCGATTTGCCGAGTTGATGATGTCGTCGGGACTCGTTTGTAATGACTCAGTGAGTTGGGTGACGTTTCACAGCGCGTATGACTTCGCGTATTTGATTAAGATTCTGACTCAGAAGAGCCTTCCTAATCGGCTGGATGAATTCCTCGGCGTTCTAAGGGTTTTATTCGGCGATAACGTGTACGATGTGAAGTACATGATGCGGTTCTGCAAGAGCCTGTACGGCGGGTTGGACCGGATAGCGAAGAGTTTGAATGTGAACCGGGCGGTTGGGAAATGCCATCAGGCCGGTTCGGATAGTTTGCTGACGTGGCATGCGTTTCAGAAGATGAGGGACACGTTTTTTGTACAGAATGAGGTGGAGAAACATGCGGGTGTCTTGTATGGATTGGAGGCGTTCTGA

mRNA sequence

ATGGTTAGCCACGATCTCAACGACAATCACTACAAATCCATCAAAATCCGTGAAGTTTGGGCCTCCAATCTCGAATCTGAGTTCCAGTTGATCCGCGATTCGATCGATCACTTTCCTTGCGTTTCAATGGACACTGAGTTCCCCGGAATCGTTTTCACCGCTCCAACCGCGCCTTTCAACGCTCTAAATCGCTCCTCCTCTGATCACTACAAACTCCTCAAATCCAACGTCGATGCTCTCAATCTCATACAGATCGGTATCACTCTCTCCGATTCCGATGGAAATTTACCAGATCTCGGCACCGATGATAGCCGATTCATTTGGGAGTTTAACTTCATGGATTTCGATCTAGCGCGTGACATCTACGCGCCTGATTCAATCGACCTTCTCCGCCGTCAGGGCATCGATTTTGACCGGAACCGCGTGGAAGGAATCGACTCGTGCCGATTTGCCGAGTTGATGATGTCGTCGGGACTCGTTTGTAATGACTCAGTGAGTTGGGTGACGTTTCACAGCGCGTATGACTTCGCGTATTTGATTAAGATTCTGACTCAGAAGAGCCTTCCTAATCGGCTGGATGAATTCCTCGGCGTTCTAAGGGTTTTATTCGGCGATAACGTGTACGATGTGAAGTACATGATGCGGTTCTGCAAGAGCCTGTACGGCGGGTTGGACCGGATAGCGAAGAGTTTGAATGTGAACCGGGCGGTTGGGAAATGCCATCAGGCCGGTTCGGATAGTTTGCTGACGTGGCATGCGTTTCAGAAGATGAGGGACACGTTTTTTGTACAGAATGAGGTGGAGAAACATGCGGGTGTCTTGTATGGATTGGAGGCGTTCTGA

Coding sequence (CDS)

ATGGTTAGCCACGATCTCAACGACAATCACTACAAATCCATCAAAATCCGTGAAGTTTGGGCCTCCAATCTCGAATCTGAGTTCCAGTTGATCCGCGATTCGATCGATCACTTTCCTTGCGTTTCAATGGACACTGAGTTCCCCGGAATCGTTTTCACCGCTCCAACCGCGCCTTTCAACGCTCTAAATCGCTCCTCCTCTGATCACTACAAACTCCTCAAATCCAACGTCGATGCTCTCAATCTCATACAGATCGGTATCACTCTCTCCGATTCCGATGGAAATTTACCAGATCTCGGCACCGATGATAGCCGATTCATTTGGGAGTTTAACTTCATGGATTTCGATCTAGCGCGTGACATCTACGCGCCTGATTCAATCGACCTTCTCCGCCGTCAGGGCATCGATTTTGACCGGAACCGCGTGGAAGGAATCGACTCGTGCCGATTTGCCGAGTTGATGATGTCGTCGGGACTCGTTTGTAATGACTCAGTGAGTTGGGTGACGTTTCACAGCGCGTATGACTTCGCGTATTTGATTAAGATTCTGACTCAGAAGAGCCTTCCTAATCGGCTGGATGAATTCCTCGGCGTTCTAAGGGTTTTATTCGGCGATAACGTGTACGATGTGAAGTACATGATGCGGTTCTGCAAGAGCCTGTACGGCGGGTTGGACCGGATAGCGAAGAGTTTGAATGTGAACCGGGCGGTTGGGAAATGCCATCAGGCCGGTTCGGATAGTTTGCTGACGTGGCATGCGTTTCAGAAGATGAGGGACACGTTTTTTGTACAGAATGAGGTGGAGAAACATGCGGGTGTCTTGTATGGATTGGAGGCGTTCTGA

Protein sequence

MVSHDLNDNHYKSIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFNALNRSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARDIYAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLIKILTQKSLPNRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLEAF
Homology
[Close]
BLAST of Carg26259 vs. NCBI nr
Match: XP_022945861.1 (probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata])

HSP 1 Score: 572.8 bits (1475), Expect = 6.5e-160
Identity = 278/280 (99.29%), Postives = 279/280 (99.64%), Query Frame = 0 

Query: 1   MVSHDLNDNHYKSIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFN 60
           MVSHDLN+NHYKSIKIREVWASNLESEFQLIRD IDHFPCVSMDTEFPGIVFTAPTAPFN
Sbjct: 1   MVSHDLNNNHYKSIKIREVWASNLESEFQLIRDLIDHFPCVSMDTEFPGIVFTAPTAPFN 60

Query: 61  ALNRSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARD 120
           ALNRSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARD
Sbjct: 61  ALNRSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARD 120

Query: 121 IYAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLI 180
           IYAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLI
Sbjct: 121 IYAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLI 180

Query: 181 KILTQKSLPNRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKC 240
           KILTQKSLPNRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKC
Sbjct: 181 KILTQKSLPNRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKC 240

Query: 241 HQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLEAF 281
           HQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLEAF
Sbjct: 241 HQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLEAF 280

[Close]
BLAST of Carg26259 vs. NCBI nr
Match: XP_022967098.1 (probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima])

HSP 1 Score: 568.5 bits (1464), Expect = 1.2e-158
Identity = 275/280 (98.21%), Postives = 278/280 (99.29%), Query Frame = 0 

Query: 1   MVSHDLNDNHYKSIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFN 60
           MVSHDLN+NHYKSIKIREVWASNLESEFQLIRD IDHFPCVSMDTEFPGIVFTAPTAPFN
Sbjct: 1   MVSHDLNNNHYKSIKIREVWASNLESEFQLIRDLIDHFPCVSMDTEFPGIVFTAPTAPFN 60

Query: 61  ALNRSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARD 120
           +LNRSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARD
Sbjct: 61  SLNRSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARD 120

Query: 121 IYAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLI 180
           IYAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLI
Sbjct: 121 IYAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLI 180

Query: 181 KILTQKSLPNRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKC 240
           KILTQK LPNR+DEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKC
Sbjct: 181 KILTQKRLPNRVDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKC 240

Query: 241 HQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLEAF 281
           HQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLEAF
Sbjct: 241 HQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLEAF 280

[Close]
BLAST of Carg26259 vs. NCBI nr
Match: XP_023541056.1 (probable CCR4-associated factor 1 homolog 11 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 563.5 bits (1451), Expect = 3.9e-157
Identity = 277/281 (98.58%), Postives = 278/281 (98.93%), Query Frame = 0 

Query: 1   MVSHDLNDNHYKSIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFN 60
           MVSHDLN+NHYKSIKIREVWASNLESEFQLIRD IDHFPCVSMDTEFPGIVFTAPTAPFN
Sbjct: 1   MVSHDLNNNHYKSIKIREVWASNLESEFQLIRDLIDHFPCVSMDTEFPGIVFTAPTAPFN 60

Query: 61  ALNR-SSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLAR 120
           ALNR SSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLAR
Sbjct: 61  ALNRSSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLAR 120

Query: 121 DIYAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYL 180
           DIYAPDSIDLLRRQGIDFDRNRVEGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDFAYL
Sbjct: 121 DIYAPDSIDLLRRQGIDFDRNRVEGIDSRRFAELMMSSGLVCNDSVSWVTFHSAYDFAYL 180

Query: 181 IKILTQKSLPNRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGK 240
           IKILTQKSLPNRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGK
Sbjct: 181 IKILTQKSLPNRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGK 240

Query: 241 CHQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLEAF 281
           CHQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLEAF
Sbjct: 241 CHQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLEAF 281

[Close]
BLAST of Carg26259 vs. NCBI nr
Match: XP_022142408.1 (probable CCR4-associated factor 1 homolog 11 [Momordica charantia])

HSP 1 Score: 488.0 bits (1255), Expect = 2.1e-134
Identity = 236/278 (84.89%), Postives = 256/278 (92.09%), Query Frame = 0 

Query: 1   MVSHDLNDNHYKSIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFN 60
           MV  DL +N  K I+IREVWASNLESEF+LIRD ID FPCVSMDTEFPG+VFT P  P++
Sbjct: 1   MVVQDLKNNS-KPIQIREVWASNLESEFELIRDLIDQFPCVSMDTEFPGVVFTDPAKPYH 60

Query: 61  ALNRSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARD 120
             NR  SDHY+LLKSNVDALNLIQIGITLSDSDGNLPDLGT  SRFIWEFNFMDFD+ARD
Sbjct: 61  RQNR-PSDHYRLLKSNVDALNLIQIGITLSDSDGNLPDLGTGGSRFIWEFNFMDFDVARD 120

Query: 121 IYAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLI 180
           ++APDSI+LLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+
Sbjct: 121 VHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLV 180

Query: 181 KILTQKSLPNRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKC 240
           K+LT++SLP+RL+EFLGVLRV FGD VYDVKYMMRFCKSLYGGLDRIAK LNV+RAVGKC
Sbjct: 181 KVLTRRSLPSRLEEFLGVLRVFFGDQVYDVKYMMRFCKSLYGGLDRIAKILNVSRAVGKC 240

Query: 241 HQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLE 279
           HQAGSDSLLTWHAFQKMRDT+FVQN +EKHAGVLYGLE
Sbjct: 241 HQAGSDSLLTWHAFQKMRDTYFVQNGLEKHAGVLYGLE 276

[Close]
BLAST of Carg26259 vs. NCBI nr
Match: XP_004139505.1 (PREDICTED: probable CCR4-associated factor 1 homolog 11 [Cucumis sativus] >KGN64966.1 hypothetical protein Csa_1G168920 [Cucumis sativus])

HSP 1 Score: 460.3 bits (1183), Expect = 4.7e-126
Identity = 221/280 (78.93%), Postives = 247/280 (88.21%), Query Frame = 0 

Query: 1   MVSHDLNDNHYKSIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFN 60
           M+ HDLN NH KSI+IREVWASNLESEF+LIRD ID FPCVSMDTEFPG++F     P +
Sbjct: 1   MLIHDLNTNH-KSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQDIPKS 60

Query: 61  ALNRSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARD 120
                 S HY+ LKSNVD L+LIQIGITLSDSDGNLPDLGT D+RFIWEFNF DFD+ARD
Sbjct: 61  P--NHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVARD 120

Query: 121 IYAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLI 180
           ++AP+SI+LLRRQGIDFDRNR EGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+
Sbjct: 121 LHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLV 180

Query: 181 KILTQKSLPNRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKC 240
           KILT + LP  L++FLGV+R+ FGDNVYD+KY+MRFC+SLYGGLDRIAK++NVNRAVGKC
Sbjct: 181 KILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKC 240

Query: 241 HQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLEAF 281
           HQAGSDSLLTWHAFQKMRDTFFVQ E+ KHAGVLYGLE F
Sbjct: 241 HQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF 277

[Close]
BLAST of Carg26259 vs. TAIR10
Match: AT5G22250.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 384.0 bits (985), Expect = 7.7e-107
Identity = 186/270 (68.89%), Postives = 225/270 (83.33%), Query Frame = 0 

Query: 14  IKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFNALNRSSSDH-YKL 73
           I IR+VWA NLESEF LIR  ++ +P +SMDTEFPG+++    A  + L R + ++ Y L
Sbjct: 12  IVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIY---KADLDVLRRGNPNYLYNL 71

Query: 74  LKSNVDALNLIQIGITLSDSDGNLPDL-GTDDSRFIWEFNFMDFDLARDIYAPDSIDLLR 133
           LKSNVDAL+LIQ+G+TLSD+DGNLPDL G  + R+IWEFNF DFD+ RD +APDSI+LLR
Sbjct: 72  LKSNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLR 131

Query: 134 RQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLIKILTQKSLPNR 193
           R GIDF+RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDF YL+KILT++ LP  
Sbjct: 132 RHGIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVA 191

Query: 194 LDEFLGVLRVLFGDNVYDVKYMMRFCKS-LYGGLDRIAKSLNVNRAVGKCHQAGSDSLLT 253
           L EFLG+LR  FGD VYDVK++MRFC+  LYGGLDR+A+SL VNRAVGKCHQAGSDSLLT
Sbjct: 192 LREFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLT 251

Query: 254 WHAFQKMRDTFFVQNEVEKHAGVLYGLEAF 281
           W AFQ+MRD +FV++  EKHAGVLYGLE F
Sbjct: 252 WQAFQRMRDLYFVEDGAEKHAGVLYGLEVF 278

[Close]
BLAST of Carg26259 vs. TAIR10
Match: AT3G44260.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 379.4 bits (973), Expect = 1.9e-105
Identity = 185/270 (68.52%), Postives = 222/270 (82.22%), Query Frame = 0 

Query: 13  SIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFNALNRSSSDHYKL 72
           ++  REVWA NLESEF+LI + ID +P +SMDTEFPG++F +     N       D Y L
Sbjct: 16  TVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTN-----PDDLYTL 75

Query: 73  LKSNVDALNLIQIGITLSDSDGNLPDLGTDDSR-FIWEFNFMDFDLARDIYAPDSIDLLR 132
           LK+NVDAL+LIQ+G+TLSD +GNLPDLG D  R FIWEFNF DFD+ARD +APDSI+LLR
Sbjct: 76  LKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLR 135

Query: 133 RQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLIKILTQKSLPNR 192
           RQGIDF+RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDF YL+KILT++ LP  
Sbjct: 136 RQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGA 195

Query: 193 LDEFLGVLRVLFGDNVYDVKYMMRFC-KSLYGGLDRIAKSLNVNRAVGKCHQAGSDSLLT 252
           L EF  V+RVLFG+ VYDVK+MM+FC + L+GGLDR+A++L VNRAVGKCHQAGSDSLLT
Sbjct: 196 LGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLT 255

Query: 253 WHAFQKMRDTFFVQNEVEKHAGVLYGLEAF 281
           WHAFQ+MRD +FVQ+  EKHAGVLYGLE F
Sbjct: 256 WHAFQRMRDLYFVQDGPEKHAGVLYGLEVF 280

[Close]
BLAST of Carg26259 vs. TAIR10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 296.6 bits (758), Expect = 1.6e-80
Identity = 148/265 (55.85%), Postives = 194/265 (73.21%), Query Frame = 0 

Query: 13  SIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFNALNRSSSDHYKL 72
           SI+IREVW  NLESE  LIR+ +D FP V+MDTEFPGIV      P      ++  HY+ 
Sbjct: 9   SIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIV----CRPVGTFKTNTEYHYET 68

Query: 73  LKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARDIYAPDSIDLLRR 132
           LK+NV+ L +IQ+G+T SD  GNLP  GTD+   IW+FNF +FDL  DIYA DSI+LLR+
Sbjct: 69  LKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQ 128

Query: 133 QGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLIKILTQKSLPNRL 192
            GIDF +N   GIDS RFAEL+MSSG+V N++V WVTFHS YDF YL+K+LT ++LP   
Sbjct: 129 SGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQ 188

Query: 193 DEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKCHQAGSDSLLTWH 252
             F  ++ V F   VYD+K++M+FC SL+GGL+++A+ L+V R VG CHQAGSDSLLT  
Sbjct: 189 TGFFEMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSC 248

Query: 253 AFQKMRDTFFVQNEVEKHAGVLYGL 278
            F+K+++ FF+   +EK++GVLYGL
Sbjct: 249 TFRKLQENFFI-GSMEKYSGVLYGL 266

[Close]
BLAST of Carg26259 vs. TAIR10
Match: AT1G80780.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 287.3 bits (734), Expect = 9.8e-78
Identity = 143/265 (53.96%), Postives = 193/265 (72.83%), Query Frame = 0 

Query: 13  SIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFNALNRSSSDHYKL 72
           SI+IREVW  NL+ E  LIRD +D FP V+MDTEFPGIV      P      ++  HY+ 
Sbjct: 9   SIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIV----VRPVGTFKSNADYHYET 68

Query: 73  LKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARDIYAPDSIDLLRR 132
           LK+NV+ L +IQ+G+T S+  GNLP  GT D   IW+FNF +FDL  DI+A DSI+LL++
Sbjct: 69  LKTNVNILKMIQLGLTFSNEQGNLPTCGT-DKYCIWQFNFREFDLDSDIFALDSIELLKQ 128

Query: 133 QGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLIKILTQKSLPNRL 192
            GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDF YL+K+LT ++LP+  
Sbjct: 129 SGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQ 188

Query: 193 DEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKCHQAGSDSLLTWH 252
            +F  ++ V F   VYD+K++M+FC SL+GGL+++A+ L V R VG CHQAGSDSLLT  
Sbjct: 189 TDFFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSC 248

Query: 253 AFQKMRDTFFVQNEVEKHAGVLYGL 278
            F+K+++ FFV   + K++GVLYGL
Sbjct: 249 TFRKLKENFFV-GPLHKYSGVLYGL 265

[Close]
BLAST of Carg26259 vs. TAIR10
Match: AT5G10960.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 279.3 bits (713), Expect = 2.7e-75
Identity = 144/265 (54.34%), Postives = 186/265 (70.19%), Query Frame = 0 

Query: 13  SIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFNALNRSSSDHYKL 72
           SI IREVW  NL  EF LIR+ +D F  ++MDTEFPG+V   P A F   N     +Y+ 
Sbjct: 9   SIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVL-KPVATFKYNN---DLNYRT 68

Query: 73  LKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARDIYAPDSIDLLRR 132
           LK NVD L LIQ+G+T SD +GNLP  GT D   IW+FNF +F++  DIYA +SI+LLR+
Sbjct: 69  LKENVDLLKLIQVGLTFSDENGNLPTCGT-DKFCIWQFNFREFNIGEDIYASESIELLRQ 128

Query: 133 QGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLIKILTQKSLPNRL 192
            GIDF +N  +GID  RF ELMMSSG+V ND++SWVTFH  YDF YL+K+LT K LP + 
Sbjct: 129 CGIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQ 188

Query: 193 DEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKCHQAGSDSLLTWH 252
            +F  +L V F   VYD+K++M FC  L+GGL+R+A+ + V R VG CHQAGSDSLLT  
Sbjct: 189 ADFFKLLYVYF-PTVYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLG 248

Query: 253 AFQKMRDTFFVQNEVEKHAGVLYGL 278
           +F+K+++ +F     EK+ GVLYGL
Sbjct: 249 SFRKLKERYF-PGSTEKYTGVLYGL 265

[Close]
BLAST of Carg26259 vs. Swiss-Prot
Match: sp|Q9FMS6|CAF1K_ARATH (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana OX=3702 GN=CAF1-11 PE=2 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 1.4e-105
Identity = 186/270 (68.89%), Postives = 225/270 (83.33%), Query Frame = 0 

Query: 14  IKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFNALNRSSSDH-YKL 73
           I IR+VWA NLESEF LIR  ++ +P +SMDTEFPG+++    A  + L R + ++ Y L
Sbjct: 12  IVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIY---KADLDVLRRGNPNYLYNL 71

Query: 74  LKSNVDALNLIQIGITLSDSDGNLPDL-GTDDSRFIWEFNFMDFDLARDIYAPDSIDLLR 133
           LKSNVDAL+LIQ+G+TLSD+DGNLPDL G  + R+IWEFNF DFD+ RD +APDSI+LLR
Sbjct: 72  LKSNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLR 131

Query: 134 RQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLIKILTQKSLPNR 193
           R GIDF+RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDF YL+KILT++ LP  
Sbjct: 132 RHGIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVA 191

Query: 194 LDEFLGVLRVLFGDNVYDVKYMMRFCKS-LYGGLDRIAKSLNVNRAVGKCHQAGSDSLLT 253
           L EFLG+LR  FGD VYDVK++MRFC+  LYGGLDR+A+SL VNRAVGKCHQAGSDSLLT
Sbjct: 192 LREFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLT 251

Query: 254 WHAFQKMRDTFFVQNEVEKHAGVLYGLEAF 281
           W AFQ+MRD +FV++  EKHAGVLYGLE F
Sbjct: 252 WQAFQRMRDLYFVEDGAEKHAGVLYGLEVF 278

[Close]
BLAST of Carg26259 vs. Swiss-Prot
Match: sp|Q9LXM2|CAF1I_ARATH (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana OX=3702 GN=CAF1-9 PE=2 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 3.4e-104
Identity = 185/270 (68.52%), Postives = 222/270 (82.22%), Query Frame = 0 

Query: 13  SIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFNALNRSSSDHYKL 72
           ++  REVWA NLESEF+LI + ID +P +SMDTEFPG++F +     N       D Y L
Sbjct: 16  TVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTN-----PDDLYTL 75

Query: 73  LKSNVDALNLIQIGITLSDSDGNLPDLGTDDSR-FIWEFNFMDFDLARDIYAPDSIDLLR 132
           LK+NVDAL+LIQ+G+TLSD +GNLPDLG D  R FIWEFNF DFD+ARD +APDSI+LLR
Sbjct: 76  LKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLR 135

Query: 133 RQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLIKILTQKSLPNR 192
           RQGIDF+RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDF YL+KILT++ LP  
Sbjct: 136 RQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGA 195

Query: 193 LDEFLGVLRVLFGDNVYDVKYMMRFC-KSLYGGLDRIAKSLNVNRAVGKCHQAGSDSLLT 252
           L EF  V+RVLFG+ VYDVK+MM+FC + L+GGLDR+A++L VNRAVGKCHQAGSDSLLT
Sbjct: 196 LGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLT 255

Query: 253 WHAFQKMRDTFFVQNEVEKHAGVLYGLEAF 281
           WHAFQ+MRD +FVQ+  EKHAGVLYGLE F
Sbjct: 256 WHAFQRMRDLYFVQDGPEKHAGVLYGLEVF 280

[Close]
BLAST of Carg26259 vs. Swiss-Prot
Match: sp|Q9SKZ2|CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 296.6 bits (758), Expect = 2.9e-79
Identity = 148/265 (55.85%), Postives = 194/265 (73.21%), Query Frame = 0 

Query: 13  SIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFNALNRSSSDHYKL 72
           SI+IREVW  NLESE  LIR+ +D FP V+MDTEFPGIV      P      ++  HY+ 
Sbjct: 9   SIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIV----CRPVGTFKTNTEYHYET 68

Query: 73  LKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARDIYAPDSIDLLRR 132
           LK+NV+ L +IQ+G+T SD  GNLP  GTD+   IW+FNF +FDL  DIYA DSI+LLR+
Sbjct: 69  LKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQ 128

Query: 133 QGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLIKILTQKSLPNRL 192
            GIDF +N   GIDS RFAEL+MSSG+V N++V WVTFHS YDF YL+K+LT ++LP   
Sbjct: 129 SGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQ 188

Query: 193 DEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKCHQAGSDSLLTWH 252
             F  ++ V F   VYD+K++M+FC SL+GGL+++A+ L+V R VG CHQAGSDSLLT  
Sbjct: 189 TGFFEMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSC 248

Query: 253 AFQKMRDTFFVQNEVEKHAGVLYGL 278
            F+K+++ FF+   +EK++GVLYGL
Sbjct: 249 TFRKLQENFFI-GSMEKYSGVLYGL 266

[Close]
BLAST of Carg26259 vs. Swiss-Prot
Match: sp|Q9SAI2|CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.8e-76
Identity = 143/265 (53.96%), Postives = 193/265 (72.83%), Query Frame = 0 

Query: 13  SIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFNALNRSSSDHYKL 72
           SI+IREVW  NL+ E  LIRD +D FP V+MDTEFPGIV      P      ++  HY+ 
Sbjct: 9   SIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIV----VRPVGTFKSNADYHYET 68

Query: 73  LKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARDIYAPDSIDLLRR 132
           LK+NV+ L +IQ+G+T S+  GNLP  GT D   IW+FNF +FDL  DI+A DSI+LL++
Sbjct: 69  LKTNVNILKMIQLGLTFSNEQGNLPTCGT-DKYCIWQFNFREFDLDSDIFALDSIELLKQ 128

Query: 133 QGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLIKILTQKSLPNRL 192
            GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDF YL+K+LT ++LP+  
Sbjct: 129 SGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQ 188

Query: 193 DEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKCHQAGSDSLLTWH 252
            +F  ++ V F   VYD+K++M+FC SL+GGL+++A+ L V R VG CHQAGSDSLLT  
Sbjct: 189 TDFFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSC 248

Query: 253 AFQKMRDTFFVQNEVEKHAGVLYGL 278
            F+K+++ FFV   + K++GVLYGL
Sbjct: 249 TFRKLKENFFV-GPLHKYSGVLYGL 265

[Close]
BLAST of Carg26259 vs. Swiss-Prot
Match: sp|Q9LEU4|CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 4.8e-74
Identity = 144/265 (54.34%), Postives = 186/265 (70.19%), Query Frame = 0 

Query: 13  SIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFNALNRSSSDHYKL 72
           SI IREVW  NL  EF LIR+ +D F  ++MDTEFPG+V   P A F   N     +Y+ 
Sbjct: 9   SIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVL-KPVATFKYNN---DLNYRT 68

Query: 73  LKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARDIYAPDSIDLLRR 132
           LK NVD L LIQ+G+T SD +GNLP  GT D   IW+FNF +F++  DIYA +SI+LLR+
Sbjct: 69  LKENVDLLKLIQVGLTFSDENGNLPTCGT-DKFCIWQFNFREFNIGEDIYASESIELLRQ 128

Query: 133 QGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLIKILTQKSLPNRL 192
            GIDF +N  +GID  RF ELMMSSG+V ND++SWVTFH  YDF YL+K+LT K LP + 
Sbjct: 129 CGIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQ 188

Query: 193 DEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKCHQAGSDSLLTWH 252
            +F  +L V F   VYD+K++M FC  L+GGL+R+A+ + V R VG CHQAGSDSLLT  
Sbjct: 189 ADFFKLLYVYF-PTVYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLG 248

Query: 253 AFQKMRDTFFVQNEVEKHAGVLYGL 278
           +F+K+++ +F     EK+ GVLYGL
Sbjct: 249 SFRKLKERYF-PGSTEKYTGVLYGL 265

[Close]
BLAST of Carg26259 vs. TrEMBL
Match: tr|A0A0A0LYC8|A0A0A0LYC8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G168920 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 3.1e-126
Identity = 221/280 (78.93%), Postives = 247/280 (88.21%), Query Frame = 0 

Query: 1   MVSHDLNDNHYKSIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFN 60
           M+ HDLN NH KSI+IREVWASNLESEF+LIRD ID FPCVSMDTEFPG++F     P +
Sbjct: 1   MLIHDLNTNH-KSIQIREVWASNLESEFRLIRDLIDQFPCVSMDTEFPGVIFPQQDIPKS 60

Query: 61  ALNRSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARD 120
                 S HY+ LKSNVD L+LIQIGITLSDSDGNLPDLGT D+RFIWEFNF DFD+ARD
Sbjct: 61  P--NHPSHHYQFLKSNVDLLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDVARD 120

Query: 121 IYAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLI 180
           ++AP+SI+LLRRQGIDFDRNR EGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+
Sbjct: 121 LHAPNSIELLRRQGIDFDRNREEGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLV 180

Query: 181 KILTQKSLPNRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKC 240
           KILT + LP  L++FLGV+R+ FGDNVYD+KY+MRFC+SLYGGLDRIAK++NVNRAVGKC
Sbjct: 181 KILTHQKLPKDLEQFLGVVRLFFGDNVYDMKYLMRFCQSLYGGLDRIAKTMNVNRAVGKC 240

Query: 241 HQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLEAF 281
           HQAGSDSLLTWHAFQKMRDTFFVQ E+ KHAGVLYGLE F
Sbjct: 241 HQAGSDSLLTWHAFQKMRDTFFVQTEMHKHAGVLYGLEVF 277

[Close]
BLAST of Carg26259 vs. TrEMBL
Match: tr|A0A1S3CJQ2|A0A1S3CJQ2_CUCME (probable CCR4-associated factor 1 homolog 11 OS=Cucumis melo OX=3656 GN=LOC103501738 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 5.3e-126
Identity = 222/283 (78.45%), Postives = 247/283 (87.28%), Query Frame = 0 

Query: 1   MVSHDLNDNH---YKSIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTA 60
           M+ HDLN NH   +K I+IREVWASNL+SEF+LI D ID FPCVSMDTEFPG++F   T 
Sbjct: 1   MLIHDLNINHQSIHKPIQIREVWASNLDSEFRLISDLIDRFPCVSMDTEFPGVIFPQQTK 60

Query: 61  PFNALNRSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDL 120
           P        S HY+ LKSNVD L+LIQIGITLSDSDGNLPDLGT D+RFIWEFNF DFD+
Sbjct: 61  P--KFPNHPSYHYQFLKSNVDVLHLIQIGITLSDSDGNLPDLGTGDTRFIWEFNFKDFDV 120

Query: 121 ARDIYAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFA 180
           ARD +APDSI+LLRRQGIDF+RNR EGIDS RFAELMMSSGLVCN+SVSWVTFHSAYDF 
Sbjct: 121 ARDPHAPDSIELLRRQGIDFERNREEGIDSSRFAELMMSSGLVCNESVSWVTFHSAYDFG 180

Query: 181 YLIKILTQKSLPNRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAV 240
           YL+KILTQ+ LP  L+EFLGV+RV FGDNVYD+KYMMRFC+SLYGGLDRIAK++NVNRAV
Sbjct: 181 YLVKILTQQKLPKGLEEFLGVVRVFFGDNVYDMKYMMRFCQSLYGGLDRIAKTMNVNRAV 240

Query: 241 GKCHQAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLEAF 281
           GKCHQAGSDSLLTWHAFQKMRDTFFV+NE+ KHAGVLYGLE F
Sbjct: 241 GKCHQAGSDSLLTWHAFQKMRDTFFVENEMHKHAGVLYGLEVF 281

[Close]
BLAST of Carg26259 vs. TrEMBL
Match: tr|A0A2I4FDN0|A0A2I4FDN0_9ROSI (probable CCR4-associated factor 1 homolog 11 OS=Juglans regia OX=51240 GN=LOC108997829 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 1.4e-115
Identity = 202/274 (73.72%), Postives = 239/274 (87.23%), Query Frame = 0 

Query: 10  HYKSIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTA---PTAPFNALNRSS 69
           H + I IREVWA+NL+SEF+LIRD ID +P +SMDTEFPG+VF     P  P++   R S
Sbjct: 9   HPRPIVIREVWAANLDSEFELIRDVIDSYPYISMDTEFPGLVFRPALDPAKPYSGQLR-S 68

Query: 70  SDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARDIYAPDS 129
           SDHY++LKSNVD LNLIQ+G+TLSD+DGNLP LG+ ++RFIWEFNF DFD+ARD++APDS
Sbjct: 69  SDHYRVLKSNVDVLNLIQVGLTLSDADGNLPHLGS-ENRFIWEFNFSDFDVARDVHAPDS 128

Query: 130 IDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLIKILTQK 189
           I+LLRRQGIDFDRNR EG+DS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILT++
Sbjct: 129 IELLRRQGIDFDRNREEGVDSARFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTRR 188

Query: 190 SLPNRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKCHQAGSD 249
            LP+ L+EFL ++RV FG+ VYDVKYMMRFC SLYGGLDR+A++L+V+RAVGKCHQAGSD
Sbjct: 189 MLPSGLEEFLKIMRVFFGNKVYDVKYMMRFCSSLYGGLDRVARTLDVDRAVGKCHQAGSD 248

Query: 250 SLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLEAF 281
           SLLTWHAFQKMRD +FV +  EKHAGVLYGLE F
Sbjct: 249 SLLTWHAFQKMRDVYFVTDGPEKHAGVLYGLEVF 280

[Close]
BLAST of Carg26259 vs. TrEMBL
Match: tr|A0A2P2PKK0|A0A2P2PKK0_RHIMU (CCR4-NOT transcription complex family protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 3.2e-115
Identity = 201/279 (72.04%), Postives = 236/279 (84.59%), Query Frame = 0 

Query: 6   LNDNHYKSIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFNAL--- 65
           + D+    + +REVW+ NLE+EF+LI + ID FP +SMDTEFPG+V+  P  P N     
Sbjct: 10  MEDSRPAVVVVREVWSHNLEAEFELIGELIDRFPYISMDTEFPGLVYRPPVDPANKYYHS 69

Query: 66  NRSSSDHYKLLKSNVDALNLIQIGITLSDSDGNLPDLGT-DDSRFIWEFNFMDFDLARDI 125
            R  SDHYK+LKSNVDALNLIQ+G+TLSDSDGNLPDLG  D SRFIWEFNF DFD+ RD+
Sbjct: 70  RRKPSDHYKILKSNVDALNLIQVGLTLSDSDGNLPDLGAGDKSRFIWEFNFRDFDVERDM 129

Query: 126 YAPDSIDLLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLIK 185
           +APDSI+LLRRQGIDF RNR EG+DS RFAELMMSSGLVCNDSVSWVTFHSAYDF YL+K
Sbjct: 130 HAPDSIELLRRQGIDFKRNRNEGVDSVRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK 189

Query: 186 ILTQKSLPNRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKCH 245
           ILT+++LP R  EFLG+LRV FGD VYDVK+MMRFC+SL+GGLDR+A++L VNRAVGKCH
Sbjct: 190 ILTRRALPGRPAEFLGLLRVFFGDKVYDVKHMMRFCESLFGGLDRVARTLEVNRAVGKCH 249

Query: 246 QAGSDSLLTWHAFQKMRDTFFVQNEVEKHAGVLYGLEAF 281
           QAGSDSLLTWHAFQKMRD +F+++  EKHAGV+YGLE F
Sbjct: 250 QAGSDSLLTWHAFQKMRDVYFLEDGPEKHAGVVYGLEVF 288

[Close]
BLAST of Carg26259 vs. TrEMBL
Match: tr|A0A2C9V215|A0A2C9V215_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G165000 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 5.5e-115
Identity = 204/271 (75.28%), Postives = 234/271 (86.35%), Query Frame = 0 

Query: 12  KSIKIREVWASNLESEFQLIRDSIDHFPCVSMDTEFPGIVFTAPTAPFNALNRS--SSDH 71
           K I IREVW+SNLESEFQLIRD ID FP +SMDTEFPG+VF     P  + +R    SDH
Sbjct: 11  KPIVIREVWSSNLESEFQLIRDLIDGFPFISMDTEFPGLVFRPSLDPTKSYSRQRRPSDH 70

Query: 72  YKLLKSNVDALNLIQIGITLSDSDGNLPDLGTDDSRFIWEFNFMDFDLARDIYAPDSIDL 131
           YK+LKSNVDALNLIQ+G+TLSDS+GNLPDLGT  +RFIWEFNF DFD++RD +APDSIDL
Sbjct: 71  YKILKSNVDALNLIQVGLTLSDSNGNLPDLGT-ANRFIWEFNFRDFDVSRDAHAPDSIDL 130

Query: 132 LRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFAYLIKILTQKSLP 191
           LRRQGIDF+RNR EG+DS  FAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILT++ LP
Sbjct: 131 LRRQGIDFERNRDEGVDSGHFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTRRCLP 190

Query: 192 NRLDEFLGVLRVLFGDNVYDVKYMMRFCKSLYGGLDRIAKSLNVNRAVGKCHQAGSDSLL 251
             L+EFL +LRV FG  VYD+K+MMRFC SLYGGLDR+A++L+VNRAVGKCHQAGSDSLL
Sbjct: 191 GGLEEFLSLLRVFFGGRVYDLKHMMRFCDSLYGGLDRVARTLDVNRAVGKCHQAGSDSLL 250

Query: 252 TWHAFQKMRDTFFVQNEVEKHAGVLYGLEAF 281
           TWHAFQ+MRD +FV++  EKHAGVLYGLE F
Sbjct: 251 TWHAFQRMRDVYFVKDGPEKHAGVLYGLEVF 280

The following BLAST results are available for this feature:
BLAST of Carg26259 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022945861.16.5e-16099.29probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata][more]
XP_022967098.11.2e-15898.21probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima][more]
XP_023541056.13.9e-15798.58probable CCR4-associated factor 1 homolog 11 [Cucurbita pepo subsp. pepo][more]
XP_022142408.12.1e-13484.89probable CCR4-associated factor 1 homolog 11 [Momordica charantia][more]
XP_004139505.14.7e-12678.93PREDICTED: probable CCR4-associated factor 1 homolog 11 [Cucumis sativus] >KGN64... [more]
BLAST of Carg26259 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G22250.17.7e-10768.89Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT3G44260.11.9e-10568.52Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT2G32070.11.6e-8055.85Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G80780.39.8e-7853.96Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT5G10960.12.7e-7554.34Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
BLAST of Carg26259 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FMS6|CAF1K_ARATH1.4e-10568.89Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana OX=3702 GN=... [more]
sp|Q9LXM2|CAF1I_ARATH3.4e-10468.52Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
sp|Q9SKZ2|CAF1G_ARATH2.9e-7955.85Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
sp|Q9SAI2|CAF1F_ARATH1.8e-7653.96Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
sp|Q9LEU4|CAF1J_ARATH4.8e-7454.34Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=... [more]
BLAST of Carg26259 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LYC8|A0A0A0LYC8_CUCSA3.1e-12678.93Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G168920 PE=4 SV=1[more]
tr|A0A1S3CJQ2|A0A1S3CJQ2_CUCME5.3e-12678.45probable CCR4-associated factor 1 homolog 11 OS=Cucumis melo OX=3656 GN=LOC10350... [more]
tr|A0A2I4FDN0|A0A2I4FDN0_9ROSI1.4e-11573.72probable CCR4-associated factor 1 homolog 11 OS=Juglans regia OX=51240 GN=LOC108... [more]
tr|A0A2P2PKK0|A0A2P2PKK0_RHIMU3.2e-11572.04CCR4-NOT transcription complex family protein OS=Rhizophora mucronata OX=61149 P... [more]
tr|A0A2C9V215|A0A2C9V215_MANES5.5e-11575.28Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G165000 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR036397RNaseH_sf
IPR006941RNase_CAF1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg26259-RACarg26259-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 19..146
e-value: 4.1E-10
score: 39.2
coord: 168..250
e-value: 2.9E-7
score: 29.9
IPR036397Ribonuclease H superfamilyGENE3DG3DSA:3.30.420.10coord: 12..277
e-value: 6.4E-108
score: 361.7
NoneNo IPR availablePANTHERPTHR10797:SF3CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATEDcoord: 3..278
NoneNo IPR availablePANTHERPTHR10797CCR4-NOT TRANSCRIPTION COMPLEX SUBUNITcoord: 3..278
IPR012337Ribonuclease H-like superfamilySUPERFAMILYSSF53098Ribonuclease H-likecoord: 16..277