Carg25090 (gene) Silver-seed gourd

Overview
NameCarg25090
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionHeavy metal-associated domain containing protein
LocationCucurbita_argyrosperma_scaffold_072 : 251586 .. 252475 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACCTTTTTCTCCCTTCATTCTCTTTCACATTTCATTTTTTGCTCATCACCCAAATGGCTCAGGTTTCTCCTCTTCCTTTTTCTCTCTGATTCCTCTTTCTTTCTTCTTATTACATTTCTGTTTTCTCTTCGATCTCTTGCAGAAAGTTGTGCTGAAGGTGATGACCATGACTGACGACAAGACGAAGCAGAAGGCAATCGAAGCTGCTGCCGACATCTACGGTTCGTCTCCGATTCTCTTTTTTTTTTTTTTTTTTTTTTTTTCCAAATCTTTCTTCCGAGTTTCTGATCTCTAAGTGTGGAAAATCGATCGGCTCTGTTTGTTTGCTTGTTCTGTTGTCTGAAAAGAATCGGAAACTGAAAAACTACATGAAATTATTTGGAATCGGAAATTGAAAAACGATATGAAATCATTCGGAATCGTAAACTGAAAAACGATATGGAATCATTTGGAATCGGAAATTGAAAAACGATTTGAAATCATTTGGAATCGTAAACTGAAAAACGATATGAAATCATTTGGAATCGGAAATTGAAGAACGATATGAAATCATTCGGAATCGGAAATTGAAAAACGATATGAAATCATTTGGAATCGTAAACTGAAAAACGATATGAAATCATTTGAATGATTAGGTGTCGATTCGATCGCGGCGGATCTGAAGGATCAGAAACTGACGGTGATAGGATCGATGGACGCGGTGGCGATTGTGAAGAAATTGAAGAAAGTAGGTAAAGTGGACTTGATATCAGTCGGACCTGCAAAGGAAGAGAAGAAAGAGGAGAAGAAAGAGGAGAAGAAGGAAGAGAAAAAAGAGGAGAAAAAAGAGGAGAAAAAGGAAGAGAAAAAGGAAGAAAAAAAGTGAAAAAGTACAATTCCTTTCCCCCT

mRNA sequence

AAACCTTTTTCTCCCTTCATTCTCTTTCACATTTCATTTTTTGCTCATCACCCAAATGGCTCAGGTTTCTCCTCTTCCTTTTTCTCTCTGATTCCTCTTTCTTTCTTCTTATTACATTTCTGTTTTCTCTTCGATCTCTTGCAGAAAGTTGTGCTGAAGGTGATGACCATGACTGACGACAAGACGAAGCAGAAGGCAATCGAAGCTGCTGCCGACATCTACGGTGTCGATTCGATCGCGGCGGATCTGAAGGATCAGAAACTGACGGTGATAGGATCGATGGACGCGGTGGCGATTGTGAAGAAATTGAAGAAAGTAGGTAAAGTGGACTTGATATCAGTCGGACCTGCAAAGGAAGAGAAGAAAGAGGAGAAGAAAGAGGAGAAGAAGGAAGAGAAAAAAGAGGAGAAAAAAGAGGAGAAAAAGGAAGAGAAAAAGGAAGAAAAAAAGTGAAAAAGTACAATTCCTTTCCCCCT

Coding sequence (CDS)

AAACCTTTTTCTCCCTTCATTCTCTTTCACATTTCATTTTTTGCTCATCACCCAAATGGCTCAGGTTTCTCCTCTTCCTTTTTCTCTCTGATTCCTCTTTCTTTCTTCTTATTACATTTCTGTTTTCTCTTCGATCTCTTGCAGAAAGTTGTGCTGAAGGTGATGACCATGACTGACGACAAGACGAAGCAGAAGGCAATCGAAGCTGCTGCCGACATCTACGGTGTCGATTCGATCGCGGCGGATCTGAAGGATCAGAAACTGACGGTGATAGGATCGATGGACGCGGTGGCGATTGTGAAGAAATTGAAGAAAGTAGGTAAAGTGGACTTGATATCAGTCGGACCTGCAAAGGAAGAGAAGAAAGAGGAGAAGAAAGAGGAGAAGAAGGAAGAGAAAAAAGAGGAGAAAAAAGAGGAGAAAAAGGAAGAGAAAAAGGAAGAAAAAAAGTGA

Protein sequence

KPFSPFILFHISFFAHHPNGSGFSSSFFSLIPLSFFLLHFCFLFDLLQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK
Homology
[Close]
BLAST of Carg25090 vs. NCBI nr
Match: XP_023554195.1 (heavy metal-associated isoprenylated plant protein 39 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 154.5 bits (389), Expect = 2.9e-34
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 0 

Query: 35  FFLLHFCFLFDLLQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSM 94
           F LLHFCFLF LLQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSM
Sbjct: 17  FLLLHFCFLFHLLQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSM 76

Query: 95  DAVAIVKKLKKVGKVDLISVGPAKEE 121
           DAVAIVKKLKKVGKVDLISVGPAKEE
Sbjct: 77  DAVAIVKKLKKVGKVDLISVGPAKEE 102

[Close]
BLAST of Carg25090 vs. NCBI nr
Match: XP_022931768.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita moschata] >XP_022971860.1 heavy metal-associated isoprenylated plant protein 39 [Cucurbita maxima] >XP_023554196.1 heavy metal-associated isoprenylated plant protein 39 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134.8 bits (338), Expect = 2.4e-28
Identity = 73/75 (97.33%), Postives = 74/75 (98.67%), Query Frame = 0 

Query: 46  LLQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 105
           + QKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60

Query: 106 VGKVDLISVGPAKEE 121
           VGKVDLISVGPAKEE
Sbjct: 61  VGKVDLISVGPAKEE 75

[Close]
BLAST of Carg25090 vs. NCBI nr
Match: XP_022159597.1 (heavy metal-associated isoprenylated plant protein 39 [Momordica charantia])

HSP 1 Score: 134.0 bits (336), Expect = 4.1e-28
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0 

Query: 46  LLQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 105
           + QKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60

Query: 106 VGKVDLISVGPAKEE 121
           VGKVD+ISVGPAKEE
Sbjct: 61  VGKVDIISVGPAKEE 75

[Close]
BLAST of Carg25090 vs. NCBI nr
Match: XP_023532946.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita pepo subsp. pepo] >XP_023532947.1 heavy metal-associated isoprenylated plant protein 39-like [Cucurbita pepo subsp. pepo] >XP_023532948.1 heavy metal-associated isoprenylated plant protein 39-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 132.9 bits (333), Expect = 9.2e-28
Identity = 76/95 (80.00%), Postives = 83/95 (87.37%), Query Frame = 0 

Query: 28  FSLIPLSFFLLH--FCFLFDLLQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKD 87
           F+  P  F +LH    +L  + QKVVLKVMTMTDDK+KQKAIEAAADIYGVDSIAADLKD
Sbjct: 15  FTFPPPPFSVLHGFSSYLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKD 74

Query: 88  QKLTVIGSMDAVAIVKKLKKVGKVDLISVGPAKEE 121
           QKLTV+GSMDAVAIVKKLKKVGKVD+ISVGPAKEE
Sbjct: 75  QKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEE 109

[Close]
BLAST of Carg25090 vs. NCBI nr
Match: XP_004148353.1 (PREDICTED: FK506-binding nuclear protein [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 1.2e-27
Identity = 71/75 (94.67%), Postives = 74/75 (98.67%), Query Frame = 0 

Query: 46  LLQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 105
           + QKVVLKVMTMTD+KTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60

Query: 106 VGKVDLISVGPAKEE 121
           VGKVD+ISVGPAKEE
Sbjct: 61  VGKVDIISVGPAKEE 75

[Close]
BLAST of Carg25090 vs. TAIR10
Match: AT5G23760.1 (Copper transport protein family)

HSP 1 Score: 128.6 bits (322), Expect = 3.1e-30
Identity = 68/75 (90.67%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 46  LLQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 105
           + QKVVLKV+TMTDDKTKQKAIEAAADI+GVDSIAAD+KDQKLTVIG MDAVA+VKKLKK
Sbjct: 1   MAQKVVLKVLTMTDDKTKQKAIEAAADIFGVDSIAADMKDQKLTVIGLMDAVAVVKKLKK 60

Query: 106 VGKVDLISVGPAKEE 121
           VGKVDLISVGPAKEE
Sbjct: 61  VGKVDLISVGPAKEE 75

[Close]
BLAST of Carg25090 vs. TAIR10
Match: AT1G01490.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 5.0e-12
Identity = 36/74 (48.65%), Postives = 57/74 (77.03%), Query Frame = 0 

Query: 47  LQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKV 106
           ++K+VLK + + DD+ KQKA++  + + G+DSIA D+K++KLTVIG++D V +V KL+K 
Sbjct: 1   MKKIVLK-LDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKY 60

Query: 107 GKV-DLISVGPAKE 120
             + D++ VGPAKE
Sbjct: 61  WPMTDIVLVGPAKE 73

[Close]
BLAST of Carg25090 vs. TAIR10
Match: AT5G52740.1 (Copper transport protein family)

HSP 1 Score: 60.1 bits (144), Expect = 1.4e-09
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0 

Query: 47  LQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKV 106
           +Q VVLK + +  +KTKQKA+     + GV+S+  ++KD KLTV G +DA  IVKKLKK+
Sbjct: 1   MQVVVLK-LDVHCEKTKQKAMSTVCCLSGVNSV--EVKDGKLTVTGEIDAYMIVKKLKKI 60

Query: 107 GKVDLISVGPAKE 120
              + ISVGP KE
Sbjct: 61  CHTEFISVGPVKE 70

[Close]
BLAST of Carg25090 vs. TAIR10
Match: AT5G26690.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 2.7e-05
Identity = 27/73 (36.99%), Postives = 47/73 (64.38%), Query Frame = 0 

Query: 48  QKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVG 107
           +K+ +KV  +  +K K   +EA  ++ GV+ ++ D +   LTV+G+MD V + ++LKK+ 
Sbjct: 4   KKIEIKV-DIDCEKCKHAIMEAVTELEGVNIVSLDQEKSILTVVGTMDPVCVAEQLKKIN 63

Query: 108 KVD-LISVGPAKE 120
           K   +ISVGP K+
Sbjct: 64  KKPVVISVGPPKK 75

[Close]
BLAST of Carg25090 vs. TAIR10
Match: AT5G52760.1 (Copper transport protein family)

HSP 1 Score: 42.4 bits (98), Expect = 3.0e-04
Identity = 21/64 (32.81%), Postives = 41/64 (64.06%), Query Frame = 0 

Query: 55  MTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVGKVDLISV 114
           +++ +++T++KA+   +   GV SI  D K  K+T++G +D  A+V KL+K+   +++SV
Sbjct: 10  LSIHEERTRKKALVTVSRFSGVTSITMD-KSGKMTIVGEVDVPAVVMKLRKLCNTEIVSV 69

Query: 115 GPAK 119
              K
Sbjct: 70  DDVK 72

[Close]
BLAST of Carg25090 vs. Swiss-Prot
Match: sp|O03982|HIP39_ARATH (Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.1e-11
Identity = 36/74 (48.65%), Postives = 57/74 (77.03%), Query Frame = 0 

Query: 47  LQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKV 106
           ++K+VLK + + DD+ KQKA++  + + G+DSIA D+K++KLTVIG++D V +V KL+K 
Sbjct: 1   MKKIVLK-LDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKY 60

Query: 107 GKV-DLISVGPAKE 120
             + D++ VGPAKE
Sbjct: 61  WPMTDIVLVGPAKE 73

[Close]
BLAST of Carg25090 vs. Swiss-Prot
Match: sp|Q9LTE3|HIP12_ARATH (Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX=3702 GN=HIPP12 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.5e-08
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0 

Query: 47  LQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKV 106
           +Q VVLK + +  +KTKQKA+     + GV+S+  ++KD KLTV G +DA  IVKKLKK+
Sbjct: 1   MQVVVLK-LDVHCEKTKQKAMSTVCCLSGVNSV--EVKDGKLTVTGEIDAYMIVKKLKKI 60

Query: 107 GKVDLISVGPAKE 120
              + ISVGP KE
Sbjct: 61  CHTEFISVGPVKE 70

[Close]
BLAST of Carg25090 vs. Swiss-Prot
Match: sp|Q8GWS3|HIP2_ARATH (Heavy metal-associated isoprenylated plant protein 2 OS=Arabidopsis thaliana OX=3702 GN=HIPP02 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.8e-04
Identity = 27/73 (36.99%), Postives = 47/73 (64.38%), Query Frame = 0 

Query: 48  QKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVG 107
           +K+ +KV  +  +K K   +EA  ++ GV+ ++ D +   LTV+G+MD V + ++LKK+ 
Sbjct: 4   KKIEIKV-DIDCEKCKHAIMEAVTELEGVNIVSLDQEKSILTVVGTMDPVCVAEQLKKIN 63

Query: 108 KVD-LISVGPAKE 120
           K   +ISVGP K+
Sbjct: 64  KKPVVISVGPPKK 75

[Close]
BLAST of Carg25090 vs. TrEMBL
Match: tr|A0A1S3CPW6|A0A1S3CPW6_CUCME (synaptic vesicle membrane protein VAT-1 homolog OS=Cucumis melo OX=3656 GN=LOC103503459 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.0e-27
Identity = 70/75 (93.33%), Postives = 74/75 (98.67%), Query Frame = 0 

Query: 46  LLQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 105
           + QKVVLKVMTMTD+KTKQKAIEAAADIYGVDSIAADLKDQKLTV+GSMDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 60

Query: 106 VGKVDLISVGPAKEE 121
           VGKVD+ISVGPAKEE
Sbjct: 61  VGKVDIISVGPAKEE 75

[Close]
BLAST of Carg25090 vs. TrEMBL
Match: tr|A0A2R6PM95|A0A2R6PM95_ACTCH (Heavy metal-associated isoprenylated plant protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc28056 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.3e-27
Identity = 69/75 (92.00%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 46  LLQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 105
           + QK+VLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIG MDAVA+VKKLKK
Sbjct: 1   MAQKLVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGEMDAVAVVKKLKK 60

Query: 106 VGKVDLISVGPAKEE 121
           VGKVD+ISVGPAKEE
Sbjct: 61  VGKVDIISVGPAKEE 75

[Close]
BLAST of Carg25090 vs. TrEMBL
Match: tr|A0A2P5WGF9|A0A2P5WGF9_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA30506 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.9e-27
Identity = 68/73 (93.15%), Postives = 72/73 (98.63%), Query Frame = 0 

Query: 48  QKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVG 107
           QKVVLKV+TMTD+KTKQKAIEAAADIYGVDSIAADLKDQKLTVIG MDAVA+VKKLKKVG
Sbjct: 4   QKVVLKVLTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGQMDAVAVVKKLKKVG 63

Query: 108 KVDLISVGPAKEE 121
           KVDL+SVGPAKEE
Sbjct: 64  KVDLVSVGPAKEE 76

[Close]
BLAST of Carg25090 vs. TrEMBL
Match: tr|A0A0B0PEJ7|A0A0B0PEJ7_GOSAR (Putative late blight resistance R1B-12 OS=Gossypium arboreum OX=29729 GN=F383_27355 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.1e-27
Identity = 68/75 (90.67%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 46  LLQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 105
           + QKVVLKV+TMTD+KTKQKAIEAAADIYGVDSIAADLKDQKLTVIG MDAVA+VKKLKK
Sbjct: 1   MAQKVVLKVLTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGQMDAVAVVKKLKK 60

Query: 106 VGKVDLISVGPAKEE 121
           VGKVDL+SVGPAKEE
Sbjct: 61  VGKVDLVSVGPAKEE 75

[Close]
BLAST of Carg25090 vs. TrEMBL
Match: tr|A0A0D2Q3H9|A0A0D2Q3H9_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_006G049200 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.1e-27
Identity = 68/75 (90.67%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 46  LLQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 105
           + QKVVLKV+TMTD+KTKQKAIEAAADIYGVDSIAADLKDQKLTVIG MDAVA+VKKLKK
Sbjct: 1   MAQKVVLKVLTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGQMDAVAVVKKLKK 60

Query: 106 VGKVDLISVGPAKEE 121
           VGKVDL+SVGPAKEE
Sbjct: 61  VGKVDLVSVGPAKEE 75

The following BLAST results are available for this feature:
BLAST of Carg25090 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023554195.12.9e-3497.67heavy metal-associated isoprenylated plant protein 39 isoform X1 [Cucurbita pepo... [more]
XP_022931768.12.4e-2897.33heavy metal-associated isoprenylated plant protein 39-like [Cucurbita moschata] ... [more]
XP_022159597.14.1e-2896.00heavy metal-associated isoprenylated plant protein 39 [Momordica charantia][more]
XP_023532946.19.2e-2880.00heavy metal-associated isoprenylated plant protein 39-like [Cucurbita pepo subsp... [more]
XP_004148353.11.2e-2794.67PREDICTED: FK506-binding nuclear protein [Cucumis sativus][more]
BLAST of Carg25090 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G23760.13.1e-3090.67Copper transport protein family[more]
AT1G01490.15.0e-1248.65Heavy metal transport/detoxification superfamily protein [more]
AT5G52740.11.4e-0950.68Copper transport protein family[more]
AT5G26690.12.7e-0536.99Heavy metal transport/detoxification superfamily protein [more]
AT5G52760.13.0e-0432.81Copper transport protein family[more]
BLAST of Carg25090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O03982|HIP39_ARATH9.1e-1148.65Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX... [more]
sp|Q9LTE3|HIP12_ARATH2.5e-0850.68Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX... [more]
sp|Q8GWS3|HIP2_ARATH4.8e-0436.99Heavy metal-associated isoprenylated plant protein 2 OS=Arabidopsis thaliana OX=... [more]
BLAST of Carg25090 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CPW6|A0A1S3CPW6_CUCME1.0e-2793.33synaptic vesicle membrane protein VAT-1 homolog OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A2R6PM95|A0A2R6PM95_ACTCH2.3e-2792.00Heavy metal-associated isoprenylated plant protein OS=Actinidia chinensis var. c... [more]
tr|A0A2P5WGF9|A0A2P5WGF9_GOSBA3.9e-2793.15Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA30506 PE=4 SV... [more]
tr|A0A0B0PEJ7|A0A0B0PEJ7_GOSAR5.1e-2790.67Putative late blight resistance R1B-12 OS=Gossypium arboreum OX=29729 GN=F383_27... [more]
tr|A0A0D2Q3H9|A0A0D2Q3H9_GOSRA5.1e-2790.67Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_006G049200 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR036163HMA_dom_sf
IPR006121HMA_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25090-RACarg25090-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 117..150
NoneNo IPR availableGENE3DG3DSA:3.30.70.100coord: 45..115
e-value: 2.2E-15
score: 58.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..150
NoneNo IPR availablePANTHERPTHR22814:SF52SUBFAMILY NOT NAMEDcoord: 48..147
NoneNo IPR availablePANTHERPTHR22814COPPER TRANSPORT PROTEIN ATOX1-RELATEDcoord: 48..147
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 52..108
e-value: 1.6E-5
score: 25.2
IPR036163Heavy metal-associated domain superfamilySUPERFAMILYSSF55008HMA, heavy metal-associated domaincoord: 47..108

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg25090Cla002829Watermelon (97103) v1carwmB0204
Carg25090Csa3G914040Cucumber (Chinese Long) v2carcuB0242
Carg25090MELO3C003320Melon (DHL92) v3.5.1carmeB0220
Carg25090ClCG09G012900Watermelon (Charleston Gray)carwcgB0210
Carg25090CSPI03G47660Wild cucumber (PI 183967)carcpiB0247
Carg25090CmaCh19G004080Cucurbita maxima (Rimu)carcmaB0294
Carg25090CmaCh02G010660Cucurbita maxima (Rimu)carcmaB0295
Carg25090CmoCh19G004160Cucurbita moschata (Rifu)carcmoB0300
Carg25090CmoCh02G010840Cucurbita moschata (Rifu)carcmoB0301
Carg25090Lsi05G000100Bottle gourd (USVL1VR-Ls)carlsiB192
Carg25090Cp4.1LG05g06460Cucurbita pepo (Zucchini)carcpeB0304
Carg25090Cp4.1LG15g03140Cucurbita pepo (Zucchini)carcpeB0303
Carg25090CsGy3G044910Cucumber (Gy14) v2carcgybB0231
Carg25090MELO3C003320.2Melon (DHL92) v3.6.1carmedB0226
Carg25090CsaV3_3G049960Cucumber (Chinese Long) v3carcucB0246
Carg25090Cla97C09G175630Watermelon (97103) v2carwmbB0218
Carg25090Bhi05G000439Wax gourdcarwgoB0268
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg25090Carg08411Silver-seed gourdcarcarB252
The following block(s) are covering this gene:
GeneOrganismBlock
Carg25090Cucumber (Chinese Long) v2carcuB0241
Carg25090Cucumber (Chinese Long) v3carcucB0245
Carg25090Melon (DHL92) v3.5.1carmeB0221
Carg25090Melon (DHL92) v3.6.1carmedB0227
Carg25090Cucumber (Gy14) v2carcgybB0230
Carg25090Cucumber (Gy14) v1carcgyB0259
Carg25090Cucumber (Gy14) v1carcgyB0260