Cp4.1LG05g06460 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g06460
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionHeavy metal-associated domain protein, putative
LocationCp4.1LG05 : 3977030 .. 3980454 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCAGGTTCTTCTTCTTTATCTCTCTCTCTCTCTGATTCCTCCGCCTCTGTTTTTCTCTCTCCTTCCACGGATTTCTTTCTGATTTCGAGATTCGCAGAAAGTGGTGCTGAAGGTAATGACGATGACGGACGACAAATCGAAGCAGAAAGCAATCGAAGCCGCTGCCGACATCTACGGTTCGTTTCCGATTCGATTCGTTGTTTTCCGTATTATTTTTCTTCCACATTTCCGATCGGAATTGTGTGTGATGGTTGGATGACTAGGCGTTGATTCGATCGCCGCGGATCTGAAGGATCAGAAACTTACGGTGGTTGGATCGATGGACGCGGTGGCGATTGTGAAAAAGTTGAAGAAAGTAGGTAAAGTGGATATTATATCAGTCGGACCTGCAAAGGAAGAGAAGAAGGAAGAGAAGAAGGAAGAAAAGAAGGAAGAGAAGAAAGAGGAGAAGAAGTAAAGTAGAAGCCAAAAAGTACACAATTCCTTTACTCTTTCTTTCAATTTTTATTTTCCATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTAATTTTAATTTTAATTTTGTTATTCTAAATAATTCAAAGTTGGTCCAAGATAAATCATGCAAAAATGGCCCATTGCATTCATTAATCAAATTTAAAATTAATAAAGGATTTATATTCAAATATAAATATATGGCTAAATTAATAAAATATAAACTAATTTTAAGTACTCTATAATTGTTAATATTTATATTAAAATTTTCAAAAATACCTTTTTTTTCAAAAATTTCATTAATTCTCTTAAAACTTTTTTTAGTTTAAAAATATTATTACAGTGTTCCAAAATTACTTATAAATTCTAAAAAAGTAACAATAAAAAAATTTAAAACTTTATTTTACGAAAGCGTTTTTTAAAATTTAGGGTATTTTTTTTAAAAAAAATTTAGGTAGAGTGTATTAAATTTAAGAGTATTTTTAAAACAAAATATTAATTTTCTAAAATTAATTATAAGAATATTTCAAGAAAAGAAAAAATTAAAATTTTAGGAACATTTTTTTATGACAAAATATATAACATATTAGCGGAGAAACAATCTGAACTGAAATCCTGGTCAATTGGCCCCTAAGTAGAACAGCTCCAACCACACCACGACAAGTGTCACCGCCTCTCAAACTCTAAACTTCCACGTGGCGTGCAACCCTTTTAAATGGGTAGACCATATTTAGATCCAAACTTCCCTACAAAAATCACGACCAGATTGCTCATAATCAACAATAACAATTTTATTCACCAAACCCTTTCTCACCTTTCCAACTCTTTTCGACCAAAATGGCAGACAGCTCTCAAAGTTTGAGCTACCAAGCTGGAGAAGCCAAAGGCCAAGCCCAGGTTCACTTCGCCCCTGTTTTCTTAAGTGCTTGGTGGTCGTTTAATCGATGATGGCTAACATATTGCTTTATATGATTGTGTAGGAGAAGGCGAGTAATTTGATGGACAAGGCAAGTGATACACTCCAATCAACCAAGGAGTCGATACAAGAGGCCGGACAACAGATAGCGGCCAAGGCTCACGGTGCTGCTGATGCTCTTAAAGACGCCACTACCTTTAACAAATGAAGCTTCATCAAATTAGCTTAGGCTTTCATGAATAAAGGCTTTATCATCCGAATGGAAACATCGTATTAATTTTCTCTTTAAACGTTGAATTTTGTTGAATTGCACTTCTATTCGATATATGAAATAGAAAATTTGAATCTTGTCGCTGAAATCTATGTTTTAAGCTAGTTAAATTATGTTTGTCACTACTAGAGCACGTGATTGCTCAAAGAATTGGAGCACGTGGCTAAAACCACGGTGTTGGGGATTTAAATCCTTCTTCACCCACAATCATACTTTTCCTAAAAGTAAGAAAACCATGATTAGAATAGCGGACCAACCTAGCTATGTTAGGCTCTTTAACCATTATTGTAGCTGACCATATGTATGCGATGCCCCCTTGTTCGTATCTAGCTACTGACTATGGTACACAACTTTCATTGTTCATATCTAGCTACTGACTATGGTACACAACTTTCATTGTTCATATCTAGCTACTGACTATGGTACACAGTATAAATATCATACTATAAATTAAATATAGTATACCCAACTCGAATATGTATATATTTGCTTGTTTTAGCAAATAATAAAAATGTGTCCATTGTCTATGTTGCCGTGTAAGCTAGTATTCCTAGATGTTTATTTCTAGATATTTATAAATACATTTATTGAAATTTTCTATTAATGAGTGAATTAATGATAAAATTTAAATGCCAATAAAAATTTGTATTCAACAGCGAACTAATTTTCACAGGCACAAATTATGAACATTTAATTAAATGATAAAACAGTCGATGTGGGAATCGAGTAGATTTGGCACTGCCTGTTCCCATTAAAACACGCAAAGTTTTTAGTCCTATTTATCTAACGTCTCAAAATCAAAATAAATGGGTTGAATTTTGGAGTAATATAAATTTGGCTTTTTGTTTTTATTTCAATTTTAAAAAATAAAAAATGAAGAATTCGGATTGGGAATTTGTTTGGCATGAGCATTTTGGCTGTTGTTGCGTGCCCTTTATAAACCCCCCCGATGGCATGCGGATGCGTCACTGTTCTTCATAAACATAATACATTTACATTCCCCCCACCTCCTTTCTCTGTTCTACACGGCTTTTCCTCATATCTCACCAAAATGGCTCAGGTTCTTCTTCTTTATCTCTCTCTCTCTCTGATTCCTCCGCCTCTGTTTTTCTCTCTCCTTCCACGGATTTCTTTCTGATTTCGAGATTCGCAGAAAGTGGTGCTGAAGGTAATGACGATGACGGACGACAAATCGAAGCAGAAAGCAATCGAAGCCGCTGCCGACATCTACGGTTCGTTTCCGATTCGATTCGTTGTTTTCCGTATTATTTTTCTTCCACATTTCCGATCGGAATTGTGTGTGATGGTTGGATGACTAGGCGTTGATTCGATCGCCGCGGATCTGAAGGATCAGAAACTTACGGTGGTTGGATCGATGGACGCGGTGGCGATTGTGAAAAAGTTGAAGAAAGTAGGTAAAGTGGATATTATATCAGTCGGACCTGCAAAGGAAGAGAAGAAGGAAGAGAAGAAGGAAGAAAAGAAGGAAGAGAAGAAAGAGGAGAAGAAGTAAAGTAGAAGCCAAAAAGTACACAATTCCTTTACTCTTTCTTTCAATTTTTATTTTCCATATATATATATATATATATACATACATATGTATTTCTCTTAAAAACATCGAAATCTCTACTGATCTCGGTTAATCGCCGGACTACTCCGCCTCCTCTCCCGCCGCTGGAGAATCTGTAAATCCTTCAACCCCTGCTTCAATCCTCACAAAGTAAATAACTAA

mRNA sequence

ATGGCTCAGAAAGTGGTGCTGAAGGTAATGACGATGACGGACGACAAATCGAAGCAGAAAGCAATCGAAGCCGCTGCCGACATCTACGGCGTTGATTCGATCGCCGCGGATCTGAAGGATCAGAAACTTACGGTGGTTGGATCGATGGACGCGGTGGCGATTGTGAAAAAGTTGAAGAAAGTAGGTAAAGTGGATATTATATCAGTCGGACCTGCAAAGGAAGAGAAGAAGGAAGAGAAGAAGGAAGAAAAGAAGGAAGAGAAGAAAGAGGAGAAGAACTCTCAAAGTTTGAGCTACCAAGCTGGAGAAGCCAAAGGCCAAGCCCAGGAGAAGGCGAGTAATTTGATGGACAAGGCAAGTGATACACTCCAATCAACCAAGGAGTCGATACAAGAGGCCGGACAACAGATAGCGGCCAAGGCTCACGTGGTGCTGAAGGTAATGACGATGACGGACGACAAATCGAAGCAGAAAGCAATCGAAGCCGCTGCCGACATCTACGGCGTTGATTCGATCGCCGCGGATCTGAAGGATCAGAAACTTACGGTGGTTGGATCGATGGACGCGGTGGCGATTGTGAAAAAGTTGAAGAAAGTAGGTAAAGTGGATATTATATCAGTCGGACCTGCAAAGGAAGAGAAGAAGGAAGAGAAGAAGGAAGAAAAGAAGGAAGAGAAGAAAGAGGAGAAGAAGTAAAGTAGAAGCCAAAAAGTACACAATTCCTTTACTCTTTCTTTCAATTTTTATTTTCCATATATATATATATATATATACATACATATGTATTTCTCTTAAAAACATCGAAATCTCTACTGATCTCGGTTAATCGCCGGACTACTCCGCCTCCTCTCCCGCCGCTGGAGAATCTGTAAATCCTTCAACCCCTGCTTCAATCCTCACAAAGTAAATAACTAA

Coding sequence (CDS)

ATGGCTCAGAAAGTGGTGCTGAAGGTAATGACGATGACGGACGACAAATCGAAGCAGAAAGCAATCGAAGCCGCTGCCGACATCTACGGCGTTGATTCGATCGCCGCGGATCTGAAGGATCAGAAACTTACGGTGGTTGGATCGATGGACGCGGTGGCGATTGTGAAAAAGTTGAAGAAAGTAGGTAAAGTGGATATTATATCAGTCGGACCTGCAAAGGAAGAGAAGAAGGAAGAGAAGAAGGAAGAAAAGAAGGAAGAGAAGAAAGAGGAGAAGAACTCTCAAAGTTTGAGCTACCAAGCTGGAGAAGCCAAAGGCCAAGCCCAGGAGAAGGCGAGTAATTTGATGGACAAGGCAAGTGATACACTCCAATCAACCAAGGAGTCGATACAAGAGGCCGGACAACAGATAGCGGCCAAGGCTCACGTGGTGCTGAAGGTAATGACGATGACGGACGACAAATCGAAGCAGAAAGCAATCGAAGCCGCTGCCGACATCTACGGCGTTGATTCGATCGCCGCGGATCTGAAGGATCAGAAACTTACGGTGGTTGGATCGATGGACGCGGTGGCGATTGTGAAAAAGTTGAAGAAAGTAGGTAAAGTGGATATTATATCAGTCGGACCTGCAAAGGAAGAGAAGAAGGAAGAGAAGAAGGAAGAAAAGAAGGAAGAGAAGAAAGAGGAGAAGAAGTAA

Protein sequence

MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKNSQSLSYQAGEAKGQAQEKASNLMDKASDTLQSTKESIQEAGQQIAAKAHVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKK
Homology
[Close]
BLAST of Cp4.1LG05g06460 vs. TrEMBL
Match: A0A061G0W6_THECC (Copper transport protein family OS=Theobroma cacao GN=TCM_015168 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.4e-32
Identity = 89/105 (84.76%), Postives = 94/105 (89.52%), Query Frame = 1 

Query: 1   MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 60
           MAQKVVLKV+TMTD K+KQKAIEAAADIYGVDSIAADLKDQKLTVVG MDAVA+VKKLKK
Sbjct: 55  MAQKVVLKVLTMTDVKTKQKAIEAAADIYGVDSIAADLKDQKLTVVGQMDAVAVVKKLKK 114

Query: 61  VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKNSQSLSYQAGEAK 106
           VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEK  +    +  E K
Sbjct: 115 VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 159

[Close]
BLAST of Cp4.1LG05g06460 vs. TrEMBL
Match: D7M2C9_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_910389 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.8e-32
Identity = 84/95 (88.42%), Postives = 92/95 (96.84%), Query Frame = 1 

Query: 1  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 60
          MAQKVVLKV+TMTDDK+KQKAIEAAADI+GVDSIAAD+KDQKLTV+G MDAVA+VKKLKK
Sbjct: 1  MAQKVVLKVLTMTDDKTKQKAIEAAADIFGVDSIAADMKDQKLTVIGLMDAVAVVKKLKK 60

Query: 61 VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKNSQ 96
          VGKVD+ISVGPAKEEKKEEKKEEKKEEKKEEK  +
Sbjct: 61 VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEE 95

[Close]
BLAST of Cp4.1LG05g06460 vs. TrEMBL
Match: Q2HIM4_ARATH (At5g23760 OS=Arabidopsis thaliana GN=At5g23760 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 5.8e-32
Identity = 84/95 (88.42%), Postives = 92/95 (96.84%), Query Frame = 1 

Query: 1  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 60
          MAQKVVLKV+TMTDDK+KQKAIEAAADI+GVDSIAAD+KDQKLTV+G MDAVA+VKKLKK
Sbjct: 1  MAQKVVLKVLTMTDDKTKQKAIEAAADIFGVDSIAADMKDQKLTVIGLMDAVAVVKKLKK 60

Query: 61 VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKNSQ 96
          VGKVD+ISVGPAKEEKKEEKKEEKKEEKKEEK  +
Sbjct: 61 VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEE 95

[Close]
BLAST of Cp4.1LG05g06460 vs. TrEMBL
Match: A0A0B0PEJ7_GOSAR (Putative late blight resistance R1B-12 OS=Gossypium arboreum GN=F383_27355 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.5e-32
Identity = 83/92 (90.22%), Postives = 90/92 (97.83%), Query Frame = 1 

Query: 1  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 60
          MAQKVVLKV+TMTD+K+KQKAIEAAADIYGVDSIAADLKDQKLTV+G MDAVA+VKKLKK
Sbjct: 1  MAQKVVLKVLTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGQMDAVAVVKKLKK 60

Query: 61 VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEK 93
          VGKVD++SVGPAKEEKKEEKKEEKKEEK EEK
Sbjct: 61 VGKVDLVSVGPAKEEKKEEKKEEKKEEKNEEK 92

[Close]
BLAST of Cp4.1LG05g06460 vs. TrEMBL
Match: A0A0D2Q3H9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G049200 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 9.9e-32
Identity = 83/95 (87.37%), Postives = 91/95 (95.79%), Query Frame = 1 

Query: 1  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 60
          MAQKVVLKV+TMTD+K+KQKAIEAAADIYGVDSIAADLKDQKLTV+G MDAVA+VKKLKK
Sbjct: 1  MAQKVVLKVLTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGQMDAVAVVKKLKK 60

Query: 61 VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKNSQ 96
          VGKVD++SVGPAKEEKKEEKKEEKKEEK EEK  +
Sbjct: 61 VGKVDLVSVGPAKEEKKEEKKEEKKEEKNEEKKEE 95

[Close]
BLAST of Cp4.1LG05g06460 vs. TAIR10
Match: AT5G23760.1 (AT5G23760.1 Copper transport protein family)

HSP 1 Score: 146.0 bits (367), Expect = 2.9e-35
Identity = 84/95 (88.42%), Postives = 92/95 (96.84%), Query Frame = 1 

Query: 1  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 60
          MAQKVVLKV+TMTDDK+KQKAIEAAADI+GVDSIAAD+KDQKLTV+G MDAVA+VKKLKK
Sbjct: 1  MAQKVVLKVLTMTDDKTKQKAIEAAADIFGVDSIAADMKDQKLTVIGLMDAVAVVKKLKK 60

Query: 61 VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKNSQ 96
          VGKVD+ISVGPAKEEKKEEKKEEKKEEKKEEK  +
Sbjct: 61 VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEE 95

[Close]
BLAST of Cp4.1LG05g06460 vs. TAIR10
Match: AT1G01490.1 (AT1G01490.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-11
Identity = 51/115 (44.35%), Postives = 80/115 (69.57%), Query Frame = 1 

Query: 3   QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVG 62
           +K+VLK + + DD++KQKA++  + + G+DSIA D+K++KLTV+G++D V +V KL+K  
Sbjct: 2   KKIVLK-LDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKYW 61

Query: 63  KV-DIISVGPAKEEKKEEKKEEKKE-----EKKEEKNSQSLSYQAGEAKGQAQEK 112
            + DI+ VGPAKE +KE+K+E KKE      KKE +  +    + GEA  + +EK
Sbjct: 62  PMTDIVLVGPAKEPEKEKKEEPKKEGGGEPPKKEGEAPKEEGKKEGEAPKKEEEK 115

[Close]
BLAST of Cp4.1LG05g06460 vs. TAIR10
Match: AT5G53820.1 (AT5G53820.1 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 65.1 bits (157), Expect = 6.6e-11
Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 1 

Query: 93  NSQSLSYQAGEAKGQAQEKASNLMDKASDTLQSTKESIQEAGQQIAAKA 142
           NSQS+S+ AG+AKGQ QEKASNL+DKAS+  QS KESIQE GQQ+  KA
Sbjct: 4   NSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKA 52

[Close]
BLAST of Cp4.1LG05g06460 vs. TAIR10
Match: AT5G38760.1 (AT5G38760.1 Late embryogenesis abundant protein (LEA) family protein)

HSP 1 Score: 62.8 bits (151), Expect = 3.3e-10
Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = 1 

Query: 93  NSQSLSYQAGEAKGQAQEKASNLMDKASDTLQSTKESIQEAGQQIAAKA 142
           NSQ++S+QAG+AKGQ QEKAS +MDKAS+  QS KES++E GQQI  KA
Sbjct: 4   NSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKA 52

[Close]
BLAST of Cp4.1LG05g06460 vs. TAIR10
Match: AT5G52740.1 (AT5G52740.1 Copper transport protein family)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07
Identity = 41/87 (47.13%), Postives = 58/87 (66.67%), Query Frame = 1 

Query: 3  QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVG 62
          Q VVLK + +  +K+KQKA+     + GV+S+  ++KD KLTV G +DA  IVKKLKK+ 
Sbjct: 2  QVVVLK-LDVHCEKTKQKAMSTVCCLSGVNSV--EVKDGKLTVTGEIDAYMIVKKLKKIC 61

Query: 63 KVDIISVGPAKEEKKEEKKEEKKEEKK 90
            + ISVGP KE +K++  + KK E K
Sbjct: 62 HTEFISVGPVKEPEKKKPDDPKKPETK 85

[Close]
BLAST of Cp4.1LG05g06460 vs. NCBI nr
Match: gi|659131817|ref|XP_008465871.1| (PREDICTED: synaptic vesicle membrane protein VAT-1 homolog [Cucumis melo])

HSP 1 Score: 149.4 bits (376), Expect = 7.5e-33
Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = 1 

Query: 1   MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 60
           MAQKVVLKVMTMTD+K+KQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 60

Query: 61  VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKNSQSLSYQA 102
           VGKVDIISVGPAKEEKKEEKKEEKK+EKK+EK  +    +A
Sbjct: 61  VGKVDIISVGPAKEEKKEEKKEEKKDEKKDEKKEEPKKEEA 101

[Close]
BLAST of Cp4.1LG05g06460 vs. NCBI nr
Match: gi|449461247|ref|XP_004148353.1| (PREDICTED: FK506-binding nuclear protein [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 9.8e-33
Identity = 87/95 (91.58%), Postives = 93/95 (97.89%), Query Frame = 1 

Query: 1  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 60
          MAQKVVLKVMTMTD+K+KQKAIEAAADIYGVDSIAADLKDQKLTV+GSMDAVAIVKKLKK
Sbjct: 1  MAQKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60

Query: 61 VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKNSQ 96
          VGKVDIISVGPAKEEKKEEKKEEKK+EKK+EK  +
Sbjct: 61 VGKVDIISVGPAKEEKKEEKKEEKKDEKKDEKKEE 95

[Close]
BLAST of Cp4.1LG05g06460 vs. NCBI nr
Match: gi|727490246|ref|XP_010421185.1| (PREDICTED: 60S acidic ribosomal protein P2-like [Camelina sativa])

HSP 1 Score: 147.1 bits (370), Expect = 3.7e-32
Identity = 84/95 (88.42%), Postives = 93/95 (97.89%), Query Frame = 1 

Query: 1  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 60
          MAQKVVLKV+TMTDD++KQKAIEAAADI+GVDSIAAD+KDQKLTV+GSMDAVA+VKKLKK
Sbjct: 1  MAQKVVLKVLTMTDDRTKQKAIEAAADIFGVDSIAADMKDQKLTVIGSMDAVAVVKKLKK 60

Query: 61 VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKNSQ 96
          VGKVD+ISVGPAKEEKKEEKKEEKKEEKKEEK  +
Sbjct: 61 VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEE 95

[Close]
BLAST of Cp4.1LG05g06460 vs. NCBI nr
Match: gi|590672720|ref|XP_007038690.1| (Copper transport protein family [Theobroma cacao])

HSP 1 Score: 146.4 bits (368), Expect = 6.3e-32
Identity = 89/105 (84.76%), Postives = 94/105 (89.52%), Query Frame = 1 

Query: 1   MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 60
           MAQKVVLKV+TMTD K+KQKAIEAAADIYGVDSIAADLKDQKLTVVG MDAVA+VKKLKK
Sbjct: 55  MAQKVVLKVLTMTDVKTKQKAIEAAADIYGVDSIAADLKDQKLTVVGQMDAVAVVKKLKK 114

Query: 61  VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKNSQSLSYQAGEAK 106
           VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEK  +    +  E K
Sbjct: 115 VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 159

[Close]
BLAST of Cp4.1LG05g06460 vs. NCBI nr
Match: gi|18420713|ref|NP_568436.1| (putative copper transport protein [Arabidopsis thaliana])

HSP 1 Score: 146.0 bits (367), Expect = 8.3e-32
Identity = 84/95 (88.42%), Postives = 92/95 (96.84%), Query Frame = 1 

Query: 1  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 60
          MAQKVVLKV+TMTDDK+KQKAIEAAADI+GVDSIAAD+KDQKLTV+G MDAVA+VKKLKK
Sbjct: 1  MAQKVVLKVLTMTDDKTKQKAIEAAADIFGVDSIAADMKDQKLTVIGLMDAVAVVKKLKK 60

Query: 61 VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKNSQ 96
          VGKVD+ISVGPAKEEKKEEKKEEKKEEKKEEK  +
Sbjct: 61 VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEE 95

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g06460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG05g06460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A061G0W6_THECC4.4e-3284.76Copper transport protein family OS=Theobroma cacao GN=TCM_015168 PE=4 SV=1[more]
D7M2C9_ARALL5.8e-3288.42Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA... [more]
Q2HIM4_ARATH5.8e-3288.42At5g23760 OS=Arabidopsis thaliana GN=At5g23760 PE=2 SV=1[more]
A0A0B0PEJ7_GOSAR7.5e-3290.22Putative late blight resistance R1B-12 OS=Gossypium arboreum GN=F383_27355 PE=4 ... [more]
A0A0D2Q3H9_GOSRA9.9e-3287.37Uncharacterized protein OS=Gossypium raimondii GN=B456_006G049200 PE=4 SV=1[more]
BLAST of Cp4.1LG05g06460 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G23760.12.9e-3588.42 Copper transport protein family[more]
AT1G01490.11.0e-1144.35 Heavy metal transport/detoxification superfamily protein [more]
AT5G53820.16.6e-1171.43 Late embryogenesis abundant protein (LEA) family protein[more]
AT5G38760.13.3e-1067.35 Late embryogenesis abundant protein (LEA) family protein[more]
AT5G52740.11.2e-0747.13 Copper transport protein family[more]
BLAST of Cp4.1LG05g06460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659131817|ref|XP_008465871.1|7.5e-3388.12PREDICTED: synaptic vesicle membrane protein VAT-1 homolog [Cucumis melo][more]
gi|449461247|ref|XP_004148353.1|9.8e-3391.58PREDICTED: FK506-binding nuclear protein [Cucumis sativus][more]
gi|727490246|ref|XP_010421185.1|3.7e-3288.42PREDICTED: 60S acidic ribosomal protein P2-like [Camelina sativa][more]
gi|590672720|ref|XP_007038690.1|6.3e-3284.76Copper transport protein family [Theobroma cacao][more]
gi|18420713|ref|NP_568436.1|8.3e-3288.42putative copper transport protein [Arabidopsis thaliana][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g06460.1Cp4.1LG05g06460.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 7..62
score: 6.3E-7coord: 145..200
score: 6.
IPR006121Heavy metal-associated domain, HMAunknownSSF55008HMA, heavy metal-associated domaincoord: 2..63
score: 6.02E-7coord: 143..201
score: 2.6
NoneNo IPR availableunknownCoilCoilcoord: 72..97
score: -coord: 116..136
score: -coord: 210..231
scor
NoneNo IPR availableGENE3DG3DSA:3.30.70.100coord: 2..63
score: 1.6E-5coord: 149..201
score: 3.
NoneNo IPR availablePANTHERPTHR22814COPPER TRANSPORT PROTEIN ATOX1-RELATEDcoord: 1..92
score: 2.2E-55coord: 211..231
score: 2.2
NoneNo IPR availablePANTHERPTHR22814:SF52SUBFAMILY NOT NAMEDcoord: 211..231
score: 2.2E-55coord: 1..92
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g06460CmaCh02G010660Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g06460CmaCh19G004080Cucurbita maxima (Rimu)cmacpeB548
Cp4.1LG05g06460CmoCh19G004160Cucurbita moschata (Rifu)cmocpeB503
Cp4.1LG05g06460CmoCh02G010840Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g06460Csa3G914040Cucumber (Chinese Long) v2cpecuB721
Cp4.1LG05g06460MELO3C003320Melon (DHL92) v3.5.1cpemeB691
Cp4.1LG05g06460ClCG09G012900Watermelon (Charleston Gray)cpewcgB627
Cp4.1LG05g06460Bhi05G000439Wax gourdcpewgoB0931
Cp4.1LG05g06460CsGy3G044910Cucumber (Gy14) v2cgybcpeB429
Cp4.1LG05g06460Carg25090Silver-seed gourdcarcpeB0304
Cp4.1LG05g06460Carg08411Silver-seed gourdcarcpeB1002
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG05g06460Cp4.1LG15g03140Cucurbita pepo (Zucchini)cpecpeB278
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g06460Wax gourdcpewgoB0925
Cp4.1LG05g06460Cucurbita pepo (Zucchini)cpecpeB057
Cp4.1LG05g06460Cucurbita pepo (Zucchini)cpecpeB245
Cp4.1LG05g06460Cucumber (Gy14) v1cgycpeB0244
Cp4.1LG05g06460Cucurbita maxima (Rimu)cmacpeB358
Cp4.1LG05g06460Cucurbita maxima (Rimu)cmacpeB453
Cp4.1LG05g06460Cucurbita moschata (Rifu)cmocpeB322
Cp4.1LG05g06460Cucurbita moschata (Rifu)cmocpeB414
Cp4.1LG05g06460Wild cucumber (PI 183967)cpecpiB725
Cp4.1LG05g06460Cucumber (Chinese Long) v2cpecuB725
Cp4.1LG05g06460Bottle gourd (USVL1VR-Ls)cpelsiB618
Cp4.1LG05g06460Watermelon (Charleston Gray)cpewcgB678
Cp4.1LG05g06460Watermelon (97103) v1cpewmB705
Cp4.1LG05g06460Melon (DHL92) v3.5.1cpemeB701
Cp4.1LG05g06460Melon (DHL92) v3.6.1cpemedB835
Cp4.1LG05g06460Cucumber (Chinese Long) v3cpecucB0903