Carg08411 (gene) Silver-seed gourd

Overview
NameCarg08411
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionHeavy metal-associated domain containing protein
LocationCucurbita_argyrosperma_scaffold_022 : 127526 .. 128299 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATGCGGATGCGTCACTGTTCTTCATAAACATAATACAATTACAATCCCCACCCTCCTTTCTCTGTTCTACACGGCTTTTCCTCATCTCACCAAAATGGCTCAGGTTCTTCTTCTTTATCTCTCTCTCTCTGATTCCTCCGCCTCTGTTACTCTTTCCTTCTACGGATTTTCTTTCTGATTTCGAGATTCGCAGAAAGTGGTGCTGAAGGTAATGACGATGACGGACGACAAATCGAAGCAGAAAGCAATCGAAGCCGCTGCTGACATCTACGGTTCGTTTCTGATTCGATTCTTTGTTTTCCGTATCATTTTTCTTCTACATTTCCGATCGAAAAATTGTGTGTGATGGTTGGATGAATAGGCGTTGATTCGATAGCCGCGGATCTGAAGGATCAGAAACTTACGGTGGTTGGATCGATGGACGCGGTGGCGATTGTGAAGAAATTGAAGAAAGTAGGTAAAGTGGATATTATATCAGTCGGACCTGCAAAGGAAGAGAAGAAGGAAGAGAAGAAGGAAGAAAAGAAGGAAGAGAAGAAAAGAAGGAAGAGAAGAAAGAGGAGAAGAAGTAAAGTAGAAGCCAAAAAGTACACAATTCCTTTACTCTTTCTTTCAATTTTTATTTTTCTTTCAATTTTTATTTTCCATACATTTTATATATATATATGTATACATATGTATTTCTCTTAAAAACATCGAAATCTCTACTGATCCCGGTTAATCGCCGGACTACTCCGTCTCCTCTCCCGCGCGGCCGTAGAATCTGTAA

mRNA sequence

ATGGCATGCGGATGCGTCACTGTTCTTCATAAACATAATACAATTACAATCCCCACCCTCCTTTCTCTGTTCTACACGGCTTTTCCTCATCTCACCAAAATGGCTCAGAAAGTGGTGCTGAAGGTAATGACGATGACGGACGACAAATCGAAGCAGAAAGCAATCGAAGCCGCTGCTGACATCTACGGCGTTGATTCGATAGCCGCGGATCTGAAGGATCAGAAACTTACGGTGGTTGGATCGATGGACGCGGTGGCGATTGTGAAGAAATTGAAGAAAGTAGGTAAAGTGGATATTATATCAGTCGGACCTGCAAAGGAAGAGAAGAAGGAAGAGAAGAAGGAAGAAAAGAAGGAAGAGAAGAAAAGAAGGAAGAGAAGAAAGAGGAGAAGAAGTAAAAATCTGTAA

Coding sequence (CDS)

ATGGCATGCGGATGCGTCACTGTTCTTCATAAACATAATACAATTACAATCCCCACCCTCCTTTCTCTGTTCTACACGGCTTTTCCTCATCTCACCAAAATGGCTCAGAAAGTGGTGCTGAAGGTAATGACGATGACGGACGACAAATCGAAGCAGAAAGCAATCGAAGCCGCTGCTGACATCTACGGCGTTGATTCGATAGCCGCGGATCTGAAGGATCAGAAACTTACGGTGGTTGGATCGATGGACGCGGTGGCGATTGTGAAGAAATTGAAGAAAGTAGGTAAAGTGGATATTATATCAGTCGGACCTGCAAAGGAAGAGAAGAAGGAAGAGAAGAAGGAAGAAAAGAAGGAAGAGAAGAAAAGAAGGAAGAGAAGAAAGAGGAGAAGAAGTAAAAATCTGTAA

Protein sequence

MACGCVTVLHKHNTITIPTLLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKKRRKRRKRRRSKNL
Homology
[Close]
BLAST of Carg08411 vs. NCBI nr
Match: XP_022996221.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita maxima])

HSP 1 Score: 197.6 bits (501), Expect = 2.7e-47
Identity = 105/107 (98.13%), Postives = 105/107 (98.13%), Query Frame = 0 

Query: 1   MACGCVTVLHKHNTITIPTLLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAAD 60
           MACGCVTVLHKHNTITIP LLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAAD
Sbjct: 1   MACGCVTVLHKHNTITIPPLLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAAD 60

Query: 61  IYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKE 108
           IYGVDSI ADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKE
Sbjct: 61  IYGVDSITADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKE 107

[Close]
BLAST of Carg08411 vs. NCBI nr
Match: XP_023532946.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita pepo subsp. pepo] >XP_023532947.1 heavy metal-associated isoprenylated plant protein 39-like [Cucurbita pepo subsp. pepo] >XP_023532948.1 heavy metal-associated isoprenylated plant protein 39-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 168.3 bits (425), Expect = 1.8e-38
Identity = 94/108 (87.04%), Postives = 97/108 (89.81%), Query Frame = 0 

Query: 1   MACGCVTVLHKHNTITI-PTLLSLFYTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAA 60
           MACGCVTVLHKHNT T  P   S+ +    +LTKMAQKVVLKVMTMTDDKSKQKAIEAAA
Sbjct: 1   MACGCVTVLHKHNTFTFPPPPFSVLHGFSSYLTKMAQKVVLKVMTMTDDKSKQKAIEAAA 60

Query: 61  DIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKE 108
           DIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKE
Sbjct: 61  DIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVGKVDIISVGPAKE 108

[Close]
BLAST of Carg08411 vs. NCBI nr
Match: XP_021282244.1 (heavy metal-associated isoprenylated plant protein 39 [Herrania umbratica])

HSP 1 Score: 135.2 bits (339), Expect = 1.7e-28
Identity = 76/89 (85.39%), Postives = 82/89 (92.13%), Query Frame = 0 

Query: 21  LSLFYTAFP--HLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTV 80
           +SLF  +F    +TKMAQKVVLKV+TMTDDK+KQKAIEAAADIYGVDSIAADLKDQKLTV
Sbjct: 21  ISLFAQSFSVFLITKMAQKVVLKVLTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTV 80

Query: 81  VGSMDAVAIVKKLKKVGKVDIISVGPAKE 108
           VG MDAVA+VKKLKKVGKVDIISVGPAKE
Sbjct: 81  VGQMDAVAVVKKLKKVGKVDIISVGPAKE 109

[Close]
BLAST of Carg08411 vs. NCBI nr
Match: XP_022957620.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita moschata])

HSP 1 Score: 134.8 bits (338), Expect = 2.2e-28
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 34  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 93
           MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 60

Query: 94  VGKVDIISVGPAKE 108
           VGKVDIISVGPAKE
Sbjct: 61  VGKVDIISVGPAKE 74

[Close]
BLAST of Carg08411 vs. NCBI nr
Match: EOY23191.1 (Copper transport protein family [Theobroma cacao])

HSP 1 Score: 133.3 bits (334), Expect = 6.3e-28
Identity = 76/88 (86.36%), Postives = 80/88 (90.91%), Query Frame = 0 

Query: 22  SLFYTAFPH--LTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVV 81
           SLF  AF    +TKMAQKVVLKV+TMTD K+KQKAIEAAADIYGVDSIAADLKDQKLTVV
Sbjct: 41  SLFAQAFSFFLITKMAQKVVLKVLTMTDVKTKQKAIEAAADIYGVDSIAADLKDQKLTVV 100

Query: 82  GSMDAVAIVKKLKKVGKVDIISVGPAKE 108
           G MDAVA+VKKLKKVGKVDIISVGPAKE
Sbjct: 101 GQMDAVAVVKKLKKVGKVDIISVGPAKE 128

[Close]
BLAST of Carg08411 vs. TAIR10
Match: AT5G23760.1 (Copper transport protein family)

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-29
Identity = 66/74 (89.19%), Postives = 73/74 (98.65%), Query Frame = 0 

Query: 34  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 93
           MAQKVVLKV+TMTDDK+KQKAIEAAADI+GVDSIAAD+KDQKLTV+G MDAVA+VKKLKK
Sbjct: 1   MAQKVVLKVLTMTDDKTKQKAIEAAADIFGVDSIAADMKDQKLTVIGLMDAVAVVKKLKK 60

Query: 94  VGKVDIISVGPAKE 108
           VGKVD+ISVGPAKE
Sbjct: 61  VGKVDLISVGPAKE 74

[Close]
BLAST of Carg08411 vs. TAIR10
Match: AT1G01490.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 7.7e-12
Identity = 36/73 (49.32%), Postives = 57/73 (78.08%), Query Frame = 0 

Query: 36  QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVG 95
           +K+VLK + + DD++KQKA++  + + G+DSIA D+K++KLTV+G++D V +V KL+K  
Sbjct: 2   KKIVLK-LDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKYW 61

Query: 96  KV-DIISVGPAKE 108
            + DI+ VGPAKE
Sbjct: 62  PMTDIVLVGPAKE 73

[Close]
BLAST of Carg08411 vs. TAIR10
Match: AT5G52740.1 (Copper transport protein family)

HSP 1 Score: 57.4 bits (137), Expect = 8.0e-09
Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 0 

Query: 36  QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVG 95
           Q VVLK + +  +K+KQKA+     + GV+S+  ++KD KLTV G +DA  IVKKLKK+ 
Sbjct: 2   QVVVLK-LDVHCEKTKQKAMSTVCCLSGVNSV--EVKDGKLTVTGEIDAYMIVKKLKKIC 61

Query: 96  KVDIISVGPAKE 108
             + ISVGP KE
Sbjct: 62  HTEFISVGPVKE 70

[Close]
BLAST of Carg08411 vs. TAIR10
Match: AT5G26690.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 2.4e-05
Identity = 28/73 (38.36%), Postives = 47/73 (64.38%), Query Frame = 0 

Query: 36  QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVG 95
           +K+ +KV  +  +K K   +EA  ++ GV+ ++ D +   LTVVG+MD V + ++LKK+ 
Sbjct: 4   KKIEIKV-DIDCEKCKHAIMEAVTELEGVNIVSLDQEKSILTVVGTMDPVCVAEQLKKIN 63

Query: 96  KVD-IISVGPAKE 108
           K   +ISVGP K+
Sbjct: 64  KKPVVISVGPPKK 75

[Close]
BLAST of Carg08411 vs. TAIR10
Match: AT5G52730.1 (Copper transport protein family)

HSP 1 Score: 42.0 bits (97), Expect = 3.5e-04
Identity = 35/99 (35.35%), Postives = 51/99 (51.52%), Query Frame = 0 

Query: 12  HNTITIPTLLSLF--YTAFPHLTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAA 71
           H T T   ++SL   Y  F H  KM Q   +      D++ K+KA++      GV S+  
Sbjct: 15  HKTFTFLYIISLHSSYKLF-HFLKMQQNTNVVFKLEVDERKKKKAMKIVCGFSGVTSLNV 74

Query: 72  DLKDQKLTVVGSMDAVAIVKKLKKVGK-VDIISVGPAKE 108
            +++ KLTV G  D   + KKLKK+ K V II+  P +E
Sbjct: 75  -MEEGKLTVTGEFDNYEMTKKLKKICKHVAIIAAEPIRE 111

[Close]
BLAST of Carg08411 vs. Swiss-Prot
Match: sp|O03982|HIP39_ARATH (Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10
Identity = 36/73 (49.32%), Postives = 57/73 (78.08%), Query Frame = 0 

Query: 36  QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVG 95
           +K+VLK + + DD++KQKA++  + + G+DSIA D+K++KLTV+G++D V +V KL+K  
Sbjct: 2   KKIVLK-LDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKYW 61

Query: 96  KV-DIISVGPAKE 108
            + DI+ VGPAKE
Sbjct: 62  PMTDIVLVGPAKE 73

[Close]
BLAST of Carg08411 vs. Swiss-Prot
Match: sp|Q9LTE3|HIP12_ARATH (Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX=3702 GN=HIPP12 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07
Identity = 36/72 (50.00%), Postives = 49/72 (68.06%), Query Frame = 0 

Query: 36  QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVG 95
           Q VVLK + +  +K+KQKA+     + GV+S+  ++KD KLTV G +DA  IVKKLKK+ 
Sbjct: 2   QVVVLK-LDVHCEKTKQKAMSTVCCLSGVNSV--EVKDGKLTVTGEIDAYMIVKKLKKIC 61

Query: 96  KVDIISVGPAKE 108
             + ISVGP KE
Sbjct: 62  HTEFISVGPVKE 70

[Close]
BLAST of Carg08411 vs. Swiss-Prot
Match: sp|Q8GWS3|HIP2_ARATH (Heavy metal-associated isoprenylated plant protein 2 OS=Arabidopsis thaliana OX=3702 GN=HIPP02 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.3e-04
Identity = 28/73 (38.36%), Postives = 47/73 (64.38%), Query Frame = 0 

Query: 36  QKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKKVG 95
           +K+ +KV  +  +K K   +EA  ++ GV+ ++ D +   LTVVG+MD V + ++LKK+ 
Sbjct: 4   KKIEIKV-DIDCEKCKHAIMEAVTELEGVNIVSLDQEKSILTVVGTMDPVCVAEQLKKIN 63

Query: 96  KVD-IISVGPAKE 108
           K   +ISVGP K+
Sbjct: 64  KKPVVISVGPPKK 75

[Close]
BLAST of Carg08411 vs. TrEMBL
Match: tr|A0A061G0W6|A0A061G0W6_THECC (Copper transport protein family OS=Theobroma cacao OX=3641 GN=TCM_015168 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.2e-28
Identity = 76/88 (86.36%), Postives = 80/88 (90.91%), Query Frame = 0 

Query: 22  SLFYTAFPH--LTKMAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVV 81
           SLF  AF    +TKMAQKVVLKV+TMTD K+KQKAIEAAADIYGVDSIAADLKDQKLTVV
Sbjct: 41  SLFAQAFSFFLITKMAQKVVLKVLTMTDVKTKQKAIEAAADIYGVDSIAADLKDQKLTVV 100

Query: 82  GSMDAVAIVKKLKKVGKVDIISVGPAKE 108
           G MDAVA+VKKLKKVGKVDIISVGPAKE
Sbjct: 101 GQMDAVAVVKKLKKVGKVDIISVGPAKE 128

[Close]
BLAST of Carg08411 vs. TrEMBL
Match: tr|A0A1S3CPW6|A0A1S3CPW6_CUCME (synaptic vesicle membrane protein VAT-1 homolog OS=Cucumis melo OX=3656 GN=LOC103503459 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 9.3e-28
Identity = 72/74 (97.30%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 34  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 93
           MAQKVVLKVMTMTD+K+KQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 60

Query: 94  VGKVDIISVGPAKE 108
           VGKVDIISVGPAKE
Sbjct: 61  VGKVDIISVGPAKE 74

[Close]
BLAST of Carg08411 vs. TrEMBL
Match: tr|A0A2R6PM95|A0A2R6PM95_ACTCH (Heavy metal-associated isoprenylated plant protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc28056 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.5e-27
Identity = 69/74 (93.24%), Postives = 73/74 (98.65%), Query Frame = 0 

Query: 34  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 93
           MAQK+VLKVMTMTDDK+KQKAIEAAADIYGVDSIAADLKDQKLTV+G MDAVA+VKKLKK
Sbjct: 1   MAQKLVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGEMDAVAVVKKLKK 60

Query: 94  VGKVDIISVGPAKE 108
           VGKVDIISVGPAKE
Sbjct: 61  VGKVDIISVGPAKE 74

[Close]
BLAST of Carg08411 vs. TrEMBL
Match: tr|A0A2J6M193|A0A2J6M193_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_9X55940 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-26
Identity = 68/74 (91.89%), Postives = 72/74 (97.30%), Query Frame = 0 

Query: 34  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 93
           MAQKVVLKV+TMTDDK+KQKAIEAAADIYGVDSIAADLKDQKLTV+G MD VA+VKKLKK
Sbjct: 1   MAQKVVLKVLTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGEMDTVAVVKKLKK 60

Query: 94  VGKVDIISVGPAKE 108
           VGKVDIISVGPAKE
Sbjct: 61  VGKVDIISVGPAKE 74

[Close]
BLAST of Carg08411 vs. TrEMBL
Match: tr|A0A2I4FGD1|A0A2I4FGD1_9ROSI (nucleolar protein 58-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108998576 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-26
Identity = 67/74 (90.54%), Postives = 72/74 (97.30%), Query Frame = 0 

Query: 34  MAQKVVLKVMTMTDDKSKQKAIEAAADIYGVDSIAADLKDQKLTVVGSMDAVAIVKKLKK 93
           MAQKVVLKV+TMTDDKSKQKAIEAAAD+YG+DSIAADLKDQKLTV+G MD VAIVKKLKK
Sbjct: 1   MAQKVVLKVLTMTDDKSKQKAIEAAADVYGIDSIAADLKDQKLTVIGQMDTVAIVKKLKK 60

Query: 94  VGKVDIISVGPAKE 108
           VGKVDI+SVGPAKE
Sbjct: 61  VGKVDILSVGPAKE 74

The following BLAST results are available for this feature:
BLAST of Carg08411 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022996221.12.7e-4798.13heavy metal-associated isoprenylated plant protein 39-like [Cucurbita maxima][more]
XP_023532946.11.8e-3887.04heavy metal-associated isoprenylated plant protein 39-like [Cucurbita pepo subsp... [more]
XP_021282244.11.7e-2885.39heavy metal-associated isoprenylated plant protein 39 [Herrania umbratica][more]
XP_022957620.12.2e-28100.00heavy metal-associated isoprenylated plant protein 39-like [Cucurbita moschata][more]
EOY23191.16.3e-2886.36Copper transport protein family [Theobroma cacao][more]
BLAST of Carg08411 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G23760.11.4e-2989.19Copper transport protein family[more]
AT1G01490.17.7e-1249.32Heavy metal transport/detoxification superfamily protein [more]
AT5G52740.18.0e-0950.00Copper transport protein family[more]
AT5G26690.12.4e-0538.36Heavy metal transport/detoxification superfamily protein [more]
AT5G52730.13.5e-0435.35Copper transport protein family[more]
BLAST of Carg08411 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O03982|HIP39_ARATH1.4e-1049.32Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX... [more]
sp|Q9LTE3|HIP12_ARATH1.4e-0750.00Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX... [more]
sp|Q8GWS3|HIP2_ARATH4.3e-0438.36Heavy metal-associated isoprenylated plant protein 2 OS=Arabidopsis thaliana OX=... [more]
BLAST of Carg08411 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A061G0W6|A0A061G0W6_THECC4.2e-2886.36Copper transport protein family OS=Theobroma cacao OX=3641 GN=TCM_015168 PE=4 SV... [more]
tr|A0A1S3CPW6|A0A1S3CPW6_CUCME9.3e-2897.30synaptic vesicle membrane protein VAT-1 homolog OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A2R6PM95|A0A2R6PM95_ACTCH3.5e-2793.24Heavy metal-associated isoprenylated plant protein OS=Actinidia chinensis var. c... [more]
tr|A0A2J6M193|A0A2J6M193_LACSA1.0e-2691.89Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_9X55940 PE=4 SV=1[more]
tr|A0A2I4FGD1|A0A2I4FGD1_9ROSI1.0e-2690.54nucleolar protein 58-like isoform X2 OS=Juglans regia OX=51240 GN=LOC108998576 P... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR036163HMA_dom_sf
IPR006121HMA_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg08411-RACarg08411-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 105..131
NoneNo IPR availableGENE3DG3DSA:3.30.70.100coord: 32..103
e-value: 4.5E-16
score: 60.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..135
NoneNo IPR availablePANTHERPTHR22814:SF52SUBFAMILY NOT NAMEDcoord: 36..132
NoneNo IPR availablePANTHERPTHR22814COPPER TRANSPORT PROTEIN ATOX1-RELATEDcoord: 36..132
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 40..96
e-value: 1.6E-6
score: 28.4
IPR036163Heavy metal-associated domain superfamilySUPERFAMILYSSF55008HMA, heavy metal-associated domaincoord: 34..96

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg08411Cla002829Watermelon (97103) v1carwmB0705
Carg08411ClCG09G012900Watermelon (Charleston Gray)carwcgB0685
Carg08411CmaCh02G010660Cucurbita maxima (Rimu)carcmaB0999
Carg08411CmaCh19G004080Cucurbita maxima (Rimu)carcmaB0997
Carg08411CmoCh02G010840Cucurbita moschata (Rifu)carcmoB0971
Carg08411CmoCh19G004160Cucurbita moschata (Rifu)carcmoB0969
Carg08411Lsi05G000100Bottle gourd (USVL1VR-Ls)carlsiB652
Carg08411Cp4.1LG05g06460Cucurbita pepo (Zucchini)carcpeB1002
Carg08411Cp4.1LG15g03140Cucurbita pepo (Zucchini)carcpeB0999
Carg08411Cla97C09G175630Watermelon (97103) v2carwmbB0745
Carg08411Bhi05G000439Wax gourdcarwgoB0838
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg08411Carg25090Silver-seed gourdcarcarB252
The following block(s) are covering this gene:
GeneOrganismBlock
Carg08411Silver-seed gourdcarcarB583
Carg08411Cucumber (Gy14) v2carcgybB0707
Carg08411Cucumber (Gy14) v1carcgyB0794
Carg08411Cucurbita maxima (Rimu)carcmaB0994
Carg08411Cucurbita maxima (Rimu)carcmaB0996
Carg08411Cucurbita moschata (Rifu)carcmoB0966
Carg08411Cucurbita moschata (Rifu)carcmoB0968
Carg08411Cucurbita pepo (Zucchini)carcpeB0994
Carg08411Cucurbita pepo (Zucchini)carcpeB0998
Carg08411Wild cucumber (PI 183967)carcpiB0745
Carg08411Cucumber (Chinese Long) v2carcuB0730
Carg08411Cucumber (Chinese Long) v3carcucB0748
Carg08411Bottle gourd (USVL1VR-Ls)carlsiB650
Carg08411Melon (DHL92) v3.5.1carmeB0709
Carg08411Melon (DHL92) v3.6.1carmedB0722
Carg08411Watermelon (Charleston Gray)carwcgB0690
Carg08411Watermelon (97103) v1carwmB0708
Carg08411Watermelon (97103) v2carwmbB0743
Carg08411Wax gourdcarwgoB0831
Carg08411Wax gourdcarwgoB0836