Carg17425 (gene) Silver-seed gourd

Overview
NameCarg17425
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat-containing protein
LocationCucurbita_argyrosperma_scaffold_092 : 552338 .. 554241 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTCATGGACTCGCGTCGAAGCTGGGATTTGGTTCAGACCCATTTGTGGAGACGGGGTTGATTAGAATGTACGCTGCCTGCAGAAGGATAATGGAAGCTCGCTTGGTGTTTGATAAAATGTCTCAGAGGGATGTCGTCACTTGGAGCATCATGATTGATGGGTATGAAACTAATTTTGTTACTCTGCATTTAGTAGTGTCCATGGATGTGGTCGAATTCTGTTAATTATACGCTTTCTTGCATTGTTATGGTTGTATCTTTCTATCTTATGATTTTGAATTCATGGTCATTTTCTCCTTATCCTCAAATATTCAGGTATTGCATAAGTGGTTATTATGATCTCGCCTTTCAACTCTTTGAAGAAATGAAGAGAACAGGCTTGGAACCAGATGAAATGATTCTTTCAACTATTCTTTCTGCTTGCGCCCGAGCTGGAAATTTGGATTTTGGAACAAAAGTACACGAGTTCATAACTAAGAAGAATATTGTCATGGATCCTCACTTACAAAGTGCTCTCATCAAGATGTATGCAAGTTGTGGCTCCACGGACTTGGCTTGGGATCTGTATGAAAAGATATCCCCTAAGAACATGGTTATTTCGACTGCCATGGTTTCTGGGCTTGCAAAAGGTGGACAGATTGGTGATGCTCGCTATGTGTTTGATCAAATGGTGGAGAAGGACTTGATATGTTGGAGTGCAATGATTTCTGGATATACTGAGAGTGATTGCCCTCAAGAGGCTCTTGTACTGTTCAAGAAAATGCAACAACTGGGAATGAAACCTGATGTAGTCACCATGTTGAGTGTCATCTCAGCTTGTGCTCATCTTGGTGCATTAGATCAAGCCAAATGGATCCAAATTTATGTTGATAAAAATGGGTTCGGCAAGGCATTGTCTATCAATAATGCACTCATTGATATGTATGCCAAATGTGGGAGTCTAGAAGGAGCGAGAGAAATCTTTGGAAAGATGCCAAAGAAAAATGTTATATCTTGGACGAGTATGATTAATGCTCTTGCAATGCATGGAGATGCTCATACTGCCCTAAGTCTATTTCATCAAATGAAAGTTGAAAACGTTGAGCCTAATTGGATCACATTTGTGGGGTTGCTTTATGCTTGTAGCCATGGAGGTCTAGTTGAGGAGGGCCAAAGAATATTCCACTCGATGATCAATGAGTATGGCATAAATCCCAAGCACGAACATTTTGGTTGCATGGTTGACCTCTTTGGCCGTGCAAAATTGCTGAGAGAAGCTCTTGAGGTGGTAGAAGCAATGCCATTTGCTCCTAATGCTATTATTTGGGGATCCCTTATGGCTGCTTGTCAGCTCCATGGTGACACTGAGTTGGGAGAATTTGCTGCTAAACAAGTTCTCAAGCTCGAGCCAGATCACGATGGCGCCCTTGTTGTCTTATCAAACATATATGCTAAAGAAAGAAGATGGGAAGACGCTGGAGAGGTTAGAAAACTTATGAACGAGATGGGCGTTTCGAAAGAGAGAGGATGCAGTAGAATTGAATTGAACAATGAGGTGCATGAATTTCAAATGGCAGATAGAAAACACAAGCAAGCTGATCTAATATATCAAAAGTTAAATGAGGTAGTTCAAACGTTGAAGCTGGCTGGTTATACACCACAGACTAACTGTGTGCTCGTTGATTTAGACGACGAGGAAAAGAAGGAATTAGTCCTCTGGCACAGTGAGAAACTGGCATTGTGCTATGCCCTTATGAATGAAGGGTCACGCATTTGCATTATAAAGAACCTTCGGATTTGTGAGGATTGTCATGCTTTTATGAAACTAGCCTCAAAGGTGTATGCCAGAGAGATCGTCGTTCGGGACAGAACTCGGTTTCACCATTACAGAGACGGTTCGTGTTCTTGTAAAGACTACTGGTGA

mRNA sequence

GATTCATGGACTCGCGTCGAAGCTGGGATTTGGTTCAGACCCATTTGTGGAGACGGGGTTGATTAGAATGTACGCTGCCTGCAGAAGGATAATGGAAGCTCGCTTGGTGTTTGATAAAATGTCTCAGAGGGATGTCGTCACTTGGAGCATCATGATTGATGGGTATTGCATAAGTGGTTATTATGATCTCGCCTTTCAACTCTTTGAAGAAATGAAGAGAACAGGCTTGGAACCAGATGAAATGATTCTTTCAACTATTCTTTCTGCTTGCGCCCGAGCTGGAAATTTGGATTTTGGAACAAAAGTACACGAGTTCATAACTAAGAAGAATATTGTCATGGATCCTCACTTACAAAGTGCTCTCATCAAGATGTATGCAAGTTGTGGCTCCACGGACTTGGCTTGGGATCTGTATGAAAAGATATCCCCTAAGAACATGGTTATTTCGACTGCCATGGTTTCTGGGCTTGCAAAAGGTGGACAGATTGGTGATGCTCGCTATGTGTTTGATCAAATGGTGGAGAAGGACTTGATATGTTGGAGTGCAATGATTTCTGGATATACTGAGAGTGATTGCCCTCAAGAGGCTCTTGTACTGTTCAAGAAAATGCAACAACTGGGAATGAAACCTGATGTAGTCACCATGTTGAGTGTCATCTCAGCTTGTGCTCATCTTGGTGCATTAGATCAAGCCAAATGGATCCAAATTTATGTTGATAAAAATGGGTTCGGCAAGGCATTGTCTATCAATAATGCACTCATTGATATGTATGCCAAATGTGGGAGTCTAGAAGGAGCGAGAGAAATCTTTGGAAAGATGCCAAAGAAAAATGTTATATCTTGGACGAGTATGATTAATGCTCTTGCAATGCATGGAGATGCTCATACTGCCCTAAGTCTATTTCATCAAATGAAAGTTGAAAACGTTGAGCCTAATTGGATCACATTTGTGGGGTTGCTTTATGCTTGTAGCCATGGAGGTCTAGTTGAGGAGGGCCAAAGAATATTCCACTCGATGATCAATGAGTATGGCATAAATCCCAAGCACGAACATTTTGGTTGCATGGTTGACCTCTTTGGCCGTGCAAAATTGCTGAGAGAAGCTCTTGAGGTGGTAGAAGCAATGCCATTTGCTCCTAATGCTATTATTTGGGGATCCCTTATGGCTGCTTGTCAGCTCCATGGTGACACTGAGTTGGGAGAATTTGCTGCTAAACAAGTTCTCAAGCTCGAGCCAGATCACGATGGCGCCCTTGTTGTCTTATCAAACATATATGCTAAAGAAAGAAGATGGGAAGACGCTGGAGAGGTTAGAAAACTTATGAACGAGATGGGCGTTTCGAAAGAGAGAGGATGCAGTAGAATTGAATTGAACAATGAGGTGCATGAATTTCAAATGGCAGATAGAAAACACAAGCAAGCTGATCTAATATATCAAAAGTTAAATGAGGTAGTTCAAACGTTGAAGCTGGCTGGTTATACACCACAGACTAACTGTGTGCTCGTTGATTTAGACGACGAGGAAAAGAAGGAATTAGTCCTCTGGCACAGTGAGAAACTGGCATTGTGCTATGCCCTTATGAATGAAGGGTCACGCATTTGCATTATAAAGAACCTTCGGATTTGTGAGGATTGTCATGCTTTTATGAAACTAGCCTCAAAGGTGTATGCCAGAGAGATCGTCGTTCGGGACAGAACTCGGTTTCACCATTACAGAGACGGTTCGTGTTCTTGTAAAGACTACTGGTGA

Coding sequence (CDS)

ATGTACGCTGCCTGCAGAAGGATAATGGAAGCTCGCTTGGTGTTTGATAAAATGTCTCAGAGGGATGTCGTCACTTGGAGCATCATGATTGATGGGTATTGCATAAGTGGTTATTATGATCTCGCCTTTCAACTCTTTGAAGAAATGAAGAGAACAGGCTTGGAACCAGATGAAATGATTCTTTCAACTATTCTTTCTGCTTGCGCCCGAGCTGGAAATTTGGATTTTGGAACAAAAGTACACGAGTTCATAACTAAGAAGAATATTGTCATGGATCCTCACTTACAAAGTGCTCTCATCAAGATGTATGCAAGTTGTGGCTCCACGGACTTGGCTTGGGATCTGTATGAAAAGATATCCCCTAAGAACATGGTTATTTCGACTGCCATGGTTTCTGGGCTTGCAAAAGGTGGACAGATTGGTGATGCTCGCTATGTGTTTGATCAAATGGTGGAGAAGGACTTGATATGTTGGAGTGCAATGATTTCTGGATATACTGAGAGTGATTGCCCTCAAGAGGCTCTTGTACTGTTCAAGAAAATGCAACAACTGGGAATGAAACCTGATGTAGTCACCATGTTGAGTGTCATCTCAGCTTGTGCTCATCTTGGTGCATTAGATCAAGCCAAATGGATCCAAATTTATGTTGATAAAAATGGGTTCGGCAAGGCATTGTCTATCAATAATGCACTCATTGATATGTATGCCAAATGTGGGAGTCTAGAAGGAGCGAGAGAAATCTTTGGAAAGATGCCAAAGAAAAATGTTATATCTTGGACGAGTATGATTAATGCTCTTGCAATGCATGGAGATGCTCATACTGCCCTAAGTCTATTTCATCAAATGAAAGTTGAAAACGTTGAGCCTAATTGGATCACATTTGTGGGGTTGCTTTATGCTTGTAGCCATGGAGGTCTAGTTGAGGAGGGCCAAAGAATATTCCACTCGATGATCAATGAGTATGGCATAAATCCCAAGCACGAACATTTTGGTTGCATGGTTGACCTCTTTGGCCGTGCAAAATTGCTGAGAGAAGCTCTTGAGGTGGTAGAAGCAATGCCATTTGCTCCTAATGCTATTATTTGGGGATCCCTTATGGCTGCTTGTCAGCTCCATGGTGACACTGAGTTGGGAGAATTTGCTGCTAAACAAGTTCTCAAGCTCGAGCCAGATCACGATGGCGCCCTTGTTGTCTTATCAAACATATATGCTAAAGAAAGAAGATGGGAAGACGCTGGAGAGGTTAGAAAACTTATGAACGAGATGGGCGTTTCGAAAGAGAGAGGATGCAGTAGAATTGAATTGAACAATGAGGTGCATGAATTTCAAATGGCAGATAGAAAACACAAGCAAGCTGATCTAATATATCAAAAGTTAAATGAGGTAGTTCAAACGTTGAAGCTGGCTGGTTATACACCACAGACTAACTGTGTGCTCGTTGATTTAGACGACGAGGAAAAGAAGGAATTAGTCCTCTGGCACAGTGAGAAACTGGCATTGTGCTATGCCCTTATGAATGAAGGGTCACGCATTTGCATTATAAAGAACCTTCGGATTTGTGAGGATTGTCATGCTTTTATGAAACTAGCCTCAAAGGTGTATGCCAGAGAGATCGTCGTTCGGGACAGAACTCGGTTTCACCATTACAGAGACGGTTCGTGTTCTTGTAAAGACTACTGGTGA

Protein sequence

MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKVHEFITKKNIVMDPHLQSALIKMYASCGSTDLAWDLYEKISPKNMVISTAMVSGLAKGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIFHSMINEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELVLWHSEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSCSCKDYW
Homology
[Close]
BLAST of Carg17425 vs. NCBI nr
Match: XP_022959359.1 (pentatricopeptide repeat-containing protein At4g14820 [Cucurbita moschata] >XP_022960069.1 pentatricopeptide repeat-containing protein At4g14820 [Cucurbita moschata])

HSP 1 Score: 979.2 bits (2530), Expect = 6.0e-282
Identity = 559/560 (99.82%), Postives = 560/560 (100.00%), Query Frame = 0 

Query: 1   MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI 60
           MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI
Sbjct: 167 MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI 226

Query: 61  LSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 227 LSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 286

Query: 121 XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK 180
           XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK
Sbjct: 287 XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK 346

Query: 181 MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 240
           MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS
Sbjct: 347 MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 406

Query: 241 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYA 300
           LEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYA
Sbjct: 407 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYA 466

Query: 301 CSHGGLVEEGQRIFHSMINEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 360
           CSHGGLVEEGQRIFHSMINEYGI+PKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI
Sbjct: 467 CSHGGLVEEGQRIFHSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 526

Query: 361 IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN 420
           IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN
Sbjct: 527 IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN 586

Query: 421 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLV 480
           EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLV
Sbjct: 587 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLV 646

Query: 481 DLDDEEKKELVLWHSEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVV 540
           DLDDEEKKELVLWHSEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVV
Sbjct: 647 DLDDEEKKELVLWHSEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVV 706

Query: 541 RDRTRFHHYRDGSCSCKDYW 561
           RDRTRFHHYRDGSCSCKDYW
Sbjct: 707 RDRTRFHHYRDGSCSCKDYW 726

[Close]
BLAST of Carg17425 vs. NCBI nr
Match: XP_022974384.1 (pentatricopeptide repeat-containing protein At4g14820-like [Cucurbita maxima] >XP_022975405.1 pentatricopeptide repeat-containing protein At4g14820-like isoform X1 [Cucurbita maxima] >XP_022975406.1 pentatricopeptide repeat-containing protein At4g14820-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 958.0 bits (2475), Expect = 1.4e-275
Identity = 547/560 (97.68%), Postives = 552/560 (98.57%), Query Frame = 0 

Query: 1   MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI 60
           MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYC+SGYYDLAFQLFEEMKRTGLEPDEMI
Sbjct: 167 MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCLSGYYDLAFQLFEEMKRTGLEPDEMI 226

Query: 61  LSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           L   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 227 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 286

Query: 121 XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK 180
           XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK
Sbjct: 287 XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK 346

Query: 181 MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 240
           MQQ+GMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS
Sbjct: 347 MQQMGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 406

Query: 241 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYA 300
           LEGAREIFGKMPKKNVISWTSMINALAMHGDAH ALSLFHQMKVENVEPNWITFVGLLYA
Sbjct: 407 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHNALSLFHQMKVENVEPNWITFVGLLYA 466

Query: 301 CSHGGLVEEGQRIFHSMINEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 360
           CSHGGLV+EGQRIFHSMINEYGI+PKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI
Sbjct: 467 CSHGGLVKEGQRIFHSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 526

Query: 361 IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN 420
           IWGSLMAACQLH DTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN
Sbjct: 527 IWGSLMAACQLHSDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN 586

Query: 421 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLV 480
           EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIY KLNEVVQ LKLAGYTPQTNCVLV
Sbjct: 587 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYHKLNEVVQKLKLAGYTPQTNCVLV 646

Query: 481 DLDDEEKKELVLWHSEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVV 540
           DLD+EEKKELVLWHSEKLALCYALMNEGSRICI KNLRICEDCHAFMKLASKVYAREIVV
Sbjct: 647 DLDEEEKKELVLWHSEKLALCYALMNEGSRICITKNLRICEDCHAFMKLASKVYAREIVV 706

Query: 541 RDRTRFHHYRDGSCSCKDYW 561
           RDRTRFHHYRDGSCSCKDYW
Sbjct: 707 RDRTRFHHYRDGSCSCKDYW 726

[Close]
BLAST of Carg17425 vs. NCBI nr
Match: XP_023538947.1 (pentatricopeptide repeat-containing protein At4g14820 [Cucurbita pepo subsp. pepo] >XP_023538948.1 pentatricopeptide repeat-containing protein At4g14820 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 958.0 bits (2475), Expect = 1.4e-275
Identity = 548/560 (97.86%), Postives = 552/560 (98.57%), Query Frame = 0 

Query: 1   MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI 60
           MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI
Sbjct: 167 MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI 226

Query: 61  LSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LST XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 227 LSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 286

Query: 121 XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK 180
           XXXXXXXXXXXXXXXXGGQIGDAR VFDQMVEKDLICWS    GYTESDCPQEALVLFKK
Sbjct: 287 XXXXXXXXXXXXXXXXGGQIGDARCVFDQMVEKDLICWSXXXXGYTESDCPQEALVLFKK 346

Query: 181 MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 240
           MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS
Sbjct: 347 MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 406

Query: 241 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYA 300
           LEGAREIFGKMPKKNVISWTSMINALAMHGDAH ALSLFHQMKVENVEPNWITFVGLLYA
Sbjct: 407 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHNALSLFHQMKVENVEPNWITFVGLLYA 466

Query: 301 CSHGGLVEEGQRIFHSMINEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 360
           CSHGGLVEEGQRIFHSMINEYGI+PKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI
Sbjct: 467 CSHGGLVEEGQRIFHSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 526

Query: 361 IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN 420
           IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSN+YAKERRWEDAG+VRKLMN
Sbjct: 527 IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNLYAKERRWEDAGDVRKLMN 586

Query: 421 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLV 480
           EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQ NCVLV
Sbjct: 587 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQINCVLV 646

Query: 481 DLDDEEKKELVLWHSEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVV 540
           DLD+EEKKELVLWHSEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVV
Sbjct: 647 DLDEEEKKELVLWHSEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVV 706

Query: 541 RDRTRFHHYRDGSCSCKDYW 561
           RDRTRFHHYRDGSCSCKDYW
Sbjct: 707 RDRTRFHHYRDGSCSCKDYW 726

[Close]
BLAST of Carg17425 vs. NCBI nr
Match: XP_022975407.1 (pentatricopeptide repeat-containing protein At4g14820-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 946.4 bits (2445), Expect = 4.3e-272
Identity = 546/572 (95.45%), Postives = 551/572 (96.33%), Query Frame = 0 

Query: 1   MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI 60
           MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYC+SGYYDLAFQLFEEMKRTGLEPDEMI
Sbjct: 167 MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCLSGYYDLAFQLFEEMKRTGLEPDEMI 226

Query: 61  LSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           L   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 227 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 286

Query: 121 XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK 180
           XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK
Sbjct: 287 XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK 346

Query: 181 MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 240
           MQQ+GMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS
Sbjct: 347 MQQMGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 406

Query: 241 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYA 300
           LEGAREIFGKMPKKNVISWTSMINALAMHGDAH ALSLFHQMKVENVEPNWITFVGLLYA
Sbjct: 407 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHNALSLFHQMKVENVEPNWITFVGLLYA 466

Query: 301 CSHGGLVEEGQRIFHSMINEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 360
           CSHGGLV+EGQRIFHSMINEYGI+PKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI
Sbjct: 467 CSHGGLVKEGQRIFHSMINEYGISPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 526

Query: 361 IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN 420
           IWGSLMAACQLH DTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN
Sbjct: 527 IWGSLMAACQLHSDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN 586

Query: 421 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLV 480
           EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIY KLNEVVQ LKLAGYTPQTNCVLV
Sbjct: 587 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYHKLNEVVQKLKLAGYTPQTNCVLV 646

Query: 481 DLDDEEKKELVLWHSEKLALCYALMNEGSRICIIKNLRICE------------DCHAFMK 540
           DLD+EEKKELVLWHSEKLALCYALMNEGSRICI KNLRICE             CHAFMK
Sbjct: 647 DLDEEEKKELVLWHSEKLALCYALMNEGSRICITKNLRICEXXXXXXXXXXXXXCHAFMK 706

Query: 541 LASKVYAREIVVRDRTRFHHYRDGSCSCKDYW 561
           LASKVYAREIVVRDRTRFHHYRDGSCSCKDYW
Sbjct: 707 LASKVYAREIVVRDRTRFHHYRDGSCSCKDYW 738

[Close]
BLAST of Carg17425 vs. NCBI nr
Match: XP_022138165.1 (pentatricopeptide repeat-containing protein At4g14820 [Momordica charantia])

HSP 1 Score: 770.8 bits (1989), Expect = 3.2e-219
Identity = 455/560 (81.25%), Postives = 485/560 (86.61%), Query Frame = 0 

Query: 1   MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI 60
           MYAAC R+MEARLVFDKMS RDVVTWSIMIDGYCISG YDLAFQLFEEMKRT +EPDEMI
Sbjct: 167 MYAACGRLMEARLVFDKMSHRDVVTWSIMIDGYCISGCYDLAFQLFEEMKRTDMEPDEMI 226

Query: 61  LSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 227 LSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 286

Query: 121 XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK 180
           XXXXXXXXXXXXXXXX                                 CPQEALVLFKK
Sbjct: 287 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPQEALVLFKK 346

Query: 181 MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 240
           MQ LG+KPDVVTMLSVISACAHLGAL+QA WI  YVDKNGF KALS+NNALIDMYAKCGS
Sbjct: 347 MQLLGIKPDVVTMLSVISACAHLGALEQANWICTYVDKNGFDKALSVNNALIDMYAKCGS 406

Query: 241 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYA 300
           LEGARE+F KMPKKNVISWT MINA AMHGD+H AL+LFHQMK ENVEPNWITFVG+LYA
Sbjct: 407 LEGAREVFKKMPKKNVISWTCMINASAMHGDSHNALNLFHQMKDENVEPNWITFVGVLYA 466

Query: 301 CSHGGLVEEGQRIFHSMINEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 360
           CSHGGLVEEG++IFHSMIN+YGI+PKHEHFGCMVDLFGRA LLREALE++EAMPFAPNAI
Sbjct: 467 CSHGGLVEEGRKIFHSMINDYGISPKHEHFGCMVDLFGRANLLREALEMIEAMPFAPNAI 526

Query: 361 IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN 420
           IWGSLMAACQ++G+TELGEFAAKQVLKLEP+HDGA VVLSN+YAKERRWED GEVRKLMN
Sbjct: 527 IWGSLMAACQVYGETELGEFAAKQVLKLEPNHDGAFVVLSNVYAKERRWEDVGEVRKLMN 586

Query: 421 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLV 480
           EMGV+KERGCSR+ELNNEVHEFQMADRKH                 K+AGYTP+ +CVLV
Sbjct: 587 EMGVAKERGCSRVELNNEVHEFQMADRKHXXXXXXXXXXXXXXXXXKMAGYTPRVDCVLV 646

Query: 481 DLDDEEKKELVLWHSEKLALCYALMNEGSRICIIKNLRICEDCHAFMKLASKVYAREIVV 540
           DLD+EE+KE +LWHSEKLALCYALMNEGS I IIKNLRICEDCH FMKLASKVYAREI++
Sbjct: 647 DLDEEERKEAILWHSEKLALCYALMNEGSHIRIIKNLRICEDCHTFMKLASKVYAREIII 706

Query: 541 RDRTRFHHYRDGSCSCKDYW 561
           RDRTRFHHYRDGSCSC DYW
Sbjct: 707 RDRTRFHHYRDGSCSCNDYW 726

[Close]
BLAST of Carg17425 vs. TAIR10
Match: AT4G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 572.4 bits (1474), Expect = 3.1e-163
Identity = 302/568 (53.17%), Postives = 371/568 (65.32%), Query Frame = 0 

Query: 1   MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI 60
           MYA+C RI  AR VFD+MS RDVVTW+ MI+ YC  G  D AF+LFEEMK + + PDEMI
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214

Query: 61  LSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           L  I                                                        
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274

Query: 121 XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK 180
                XXXXXXXXXXX                                           +
Sbjct: 275 VRNLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 334

Query: 181 MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 240
           M   G+KPDVV+M SVISACA+LG LD+AKW+   +  NG    LSINNALI+MYAKCG 
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGG 394

Query: 241 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYA 300
           L+  R++F KMP++NV+SW+SMINAL+MHG+A  ALSLF +MK ENVEPN +TFVG+LY 
Sbjct: 395 LDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454

Query: 301 CSHGGLVEEGQRIFHSMINEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 360
           CSH GLVEEG++IF SM +EY I PK EH+GCMVDLFGRA LLREALEV+E+MP A N +
Sbjct: 455 CSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVV 514

Query: 361 IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN 420
           IWGSLM+AC++HG+ ELG+FAAK++L+LEPDHDGALV++SNIYA+E+RWED   +R++M 
Sbjct: 515 IWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVME 574

Query: 421 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLV 480
           E  V KE+G SRI+ N + HEF + D++HKQ++ IY KL+EVV  LKLAGY P    VLV
Sbjct: 575 EKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLV 634

Query: 481 DLDDEEKKELVLWHSEKLALCYALMNEGSR--------ICIIKNLRICEDCHAFMKLASK 540
           D+++EEKK+LVLWHSEKLALC+ LMNE           I I+KNLR+CEDCH F KL SK
Sbjct: 635 DVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSK 694

Query: 541 VYAREIVVRDRTRFHHYRDGSCSCKDYW 561
           VY REI+VRDRTRFH Y++G CSC+DYW
Sbjct: 695 VYEREIIVRDRTRFHCYKNGLCSCRDYW 722

[Close]
BLAST of Carg17425 vs. TAIR10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 425.6 bits (1093), Expect = 4.6e-119
Identity = 195/427 (45.67%), Postives = 293/427 (68.62%), Query Frame = 0 

Query: 138 GQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTMLSVI 197
           G++  A  +F+++  KD+I W+ +I GYT  +  +EAL+LF++M + G  P+ VTMLS++
Sbjct: 315 GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 374

Query: 198 SACAHLGALDQAKWIQIYVDK--NGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKKN 257
            ACAHLGA+D  +WI +Y+DK   G   A S+  +LIDMYAKCG +E A ++F  +  K+
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434

Query: 258 VISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIFH 317
           + SW +MI   AMHG A  +  LF +M+   ++P+ ITFVGLL ACSH G+++ G+ IF 
Sbjct: 435 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFR 494

Query: 318 SMINEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGDT 377
           +M  +Y + PK EH+GCM+DL G + L +EA E++  M   P+ +IW SL+ AC++HG+ 
Sbjct: 495 TMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNV 554

Query: 378 ELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIEL 437
           ELGE  A+ ++K+EP++ G+ V+LSNIYA   RW +  + R L+N+ G+ K  GCS IE+
Sbjct: 555 ELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEI 614

Query: 438 NNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELVLWHS 497
           ++ VHEF + D+ H +   IY  L E+   L+ AG+ P T+ VL ++++E K+  +  HS
Sbjct: 615 DSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHS 674

Query: 498 EKLALCYALMN--EGSRICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGS 557
           EKLA+ + L++   G+++ I+KNLR+C +CH   KL SK+Y REI+ RDRTRFHH+RDG 
Sbjct: 675 EKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGV 734

Query: 558 CSCKDYW 561
           CSC DYW
Sbjct: 735 CSCNDYW 741

[Close]
BLAST of Carg17425 vs. TAIR10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 404.4 bits (1038), Expect = 1.1e-112
Identity = 195/458 (42.58%), Postives = 290/458 (63.32%), Query Frame = 0 

Query: 138 GQIGDARYVFDQMVEKDLICWS-------------------------------AMISGYT 197
           G I DA+ +FD M EKD + W+                                      
Sbjct: 281 GSIEDAKRLFDAMEEKDNVTWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 340

Query: 198 ESDCPQEALVLFKKMQ-QLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKAL 257
            +  P EAL++F ++Q Q  MK + +T++S +SACA +GAL+  +WI  Y+ K+G     
Sbjct: 341 XNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNF 400

Query: 258 SINNALIDMYAKCGSLEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVE 317
            + +ALI MY+KCG LE +RE+F  + K++V  W++MI  LAMHG  + A+ +F++M+  
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460

Query: 318 NVEPNWITFVGLLYACSHGGLVEEGQRIFHSMINEYGINPKHEHFGCMVDLFGRAKLLRE 377
           NV+PN +TF  +  ACSH GLV+E + +FH M + YGI P+ +H+ C+VD+ GR+  L +
Sbjct: 461 NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520

Query: 378 ALEVVEAMPFAPNAIIWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAK 437
           A++ +EAMP  P+  +WG+L+ AC++H +  L E A  ++L+LEP +DGA V+LSNIYAK
Sbjct: 521 AVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAK 580

Query: 438 ERRWEDAGEVRKLMNEMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQT 497
             +WE+  E+RK M   G+ KE GCS IE++  +HEF   D  H  ++ +Y KL+EV++ 
Sbjct: 581 LGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEK 640

Query: 498 LKLAGYTPQTNCVLVDLDDEEKKELVL-WHSEKLALCYALMNEGSR--ICIIKNLRICED 557
           LK  GY P+ + VL  +++EE KE  L  HSEKLA+CY L++  +   I +IKNLR+C D
Sbjct: 641 LKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGD 700

Query: 558 CHAFMKLASKVYAREIVVRDRTRFHHYRDGSCSCKDYW 561
           CH+  KL S++Y REI+VRDR RFHH+R+G CSC D+W
Sbjct: 701 CHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738

[Close]
BLAST of Carg17425 vs. TAIR10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 397.9 bits (1021), Expect = 1.0e-110
Identity = 207/562 (36.83%), Postives = 310/562 (55.16%), Query Frame = 0 

Query: 1   MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI 60
           MY     + +A  +FD+M QR+V++W+ MI  Y     +  A +L   M R  + P+   
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164

Query: 61  LSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            S++                                                        
Sbjct: 165 YSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKL----------------- 224

Query: 121 XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK 180
                            G+  DA  VFD+MV  D I W+++I G+ ++     AL LFK+
Sbjct: 225 -----------------GEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 284

Query: 181 MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 240
           M++ G   +  T+ SV+ AC  L  L+      +++ K  + + L +NNAL+DMY KCGS
Sbjct: 285 MKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGS 344

Query: 241 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYA 300
           LE A  +F +M +++VI+W++MI+ LA +G +  AL LF +MK    +PN+IT VG+L+A
Sbjct: 345 LEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFA 404

Query: 301 CSHGGLVEEGQRIFHSMINEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 360
           CSH GL+E+G   F SM   YGI+P  EH+GCM+DL G+A  L +A++++  M   P+A+
Sbjct: 405 CSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAV 464

Query: 361 IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN 420
            W +L+ AC++  +  L E+AAK+V+ L+P+  G   +LSNIYA  ++W+   E+R  M 
Sbjct: 465 TWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMR 524

Query: 421 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLV 480
           + G+ KE GCS IE+N ++H F + D  H Q   + +KLN+++  L   GY P+TN VL 
Sbjct: 525 DRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQ 584

Query: 481 DLDDEEKKELVLWHSEKLALCYALMNEGSR--ICIIKNLRICEDCHAFMKLASKVYAREI 540
           DL+ E+ ++ +  HSEKLAL + LM       I I KNLRIC DCH F KLASK+  R I
Sbjct: 585 DLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSI 630

Query: 541 VVRDRTRFHHYRDGSCSCKDYW 561
           V+RD  R+HH++DG CSC DYW
Sbjct: 645 VIRDPIRYHHFQDGKCSCGDYW 630

[Close]
BLAST of Carg17425 vs. TAIR10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 391.7 bits (1005), Expect = 7.4e-109
Identity = 183/424 (43.16%), Postives = 274/424 (64.62%), Query Frame = 0 

Query: 139 QIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTMLSVIS 198
           +I  AR +FD+  EK L  W+AMISGYT++   ++A+ LF++MQ+    P+ VT+  ++S
Sbjct: 369 EIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILS 428

Query: 199 ACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKKNVIS 258
           ACA LGAL   KW+   V    F  ++ ++ ALI MYAKCGS+  AR +F  M KKN ++
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT 488

Query: 259 WTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIFHSMI 318
           W +MI+   +HG    AL++F++M    + P  +TF+ +LYACSH GLV+EG  IF+SMI
Sbjct: 489 WNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMI 548

Query: 319 NEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGDTELG 378
           + YG  P  +H+ CMVD+ GRA  L+ AL+ +EAM   P + +W +L+ AC++H DT L 
Sbjct: 549 HRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLA 608

Query: 379 EFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIELNNE 438
              ++++ +L+PD+ G  V+LSNI++ +R +  A  VR+   +  ++K  G + IE+   
Sbjct: 609 RTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGET 668

Query: 439 VHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELVLWHSEKL 498
            H F   D+ H Q   IY+KL ++   ++ AGY P+T   L D+++EE++ +V  HSE+L
Sbjct: 669 PHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERL 728

Query: 499 ALCYALM--NEGSRICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSCSC 558
           A+ + L+    G+ I IIKNLR+C DCH   KL SK+  R IVVRD  RFHH++DG CSC
Sbjct: 729 AIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSC 788

Query: 559 KDYW 561
            DYW
Sbjct: 789 GDYW 792

[Close]
BLAST of Carg17425 vs. Swiss-Prot
Match: sp|O23337|PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H3 PE=2 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 5.5e-162
Identity = 302/568 (53.17%), Postives = 371/568 (65.32%), Query Frame = 0 

Query: 1   MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI 60
           MYA+C RI  AR VFD+MS RDVVTW+ MI+ YC  G  D AF+LFEEMK + + PDEMI
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214

Query: 61  LSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           L  I                                                        
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274

Query: 121 XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK 180
                XXXXXXXXXXX                                           +
Sbjct: 275 VRNLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 334

Query: 181 MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 240
           M   G+KPDVV+M SVISACA+LG LD+AKW+   +  NG    LSINNALI+MYAKCG 
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGG 394

Query: 241 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYA 300
           L+  R++F KMP++NV+SW+SMINAL+MHG+A  ALSLF +MK ENVEPN +TFVG+LY 
Sbjct: 395 LDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454

Query: 301 CSHGGLVEEGQRIFHSMINEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 360
           CSH GLVEEG++IF SM +EY I PK EH+GCMVDLFGRA LLREALEV+E+MP A N +
Sbjct: 455 CSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVV 514

Query: 361 IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN 420
           IWGSLM+AC++HG+ ELG+FAAK++L+LEPDHDGALV++SNIYA+E+RWED   +R++M 
Sbjct: 515 IWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVME 574

Query: 421 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLV 480
           E  V KE+G SRI+ N + HEF + D++HKQ++ IY KL+EVV  LKLAGY P    VLV
Sbjct: 575 EKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLV 634

Query: 481 DLDDEEKKELVLWHSEKLALCYALMNEGSR--------ICIIKNLRICEDCHAFMKLASK 540
           D+++EEKK+LVLWHSEKLALC+ LMNE           I I+KNLR+CEDCH F KL SK
Sbjct: 635 DVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSK 694

Query: 541 VYAREIVVRDRTRFHHYRDGSCSCKDYW 561
           VY REI+VRDRTRFH Y++G CSC+DYW
Sbjct: 695 VYEREIIVRDRTRFHCYKNGLCSCRDYW 722

[Close]
BLAST of Carg17425 vs. Swiss-Prot
Match: sp|Q9LN01|PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 8.4e-118
Identity = 195/427 (45.67%), Postives = 293/427 (68.62%), Query Frame = 0 

Query: 138 GQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTMLSVI 197
           G++  A  +F+++  KD+I W+ +I GYT  +  +EAL+LF++M + G  P+ VTMLS++
Sbjct: 315 GELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 374

Query: 198 SACAHLGALDQAKWIQIYVDK--NGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKKN 257
            ACAHLGA+D  +WI +Y+DK   G   A S+  +LIDMYAKCG +E A ++F  +  K+
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434

Query: 258 VISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIFH 317
           + SW +MI   AMHG A  +  LF +M+   ++P+ ITFVGLL ACSH G+++ G+ IF 
Sbjct: 435 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFR 494

Query: 318 SMINEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGDT 377
           +M  +Y + PK EH+GCM+DL G + L +EA E++  M   P+ +IW SL+ AC++HG+ 
Sbjct: 495 TMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNV 554

Query: 378 ELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIEL 437
           ELGE  A+ ++K+EP++ G+ V+LSNIYA   RW +  + R L+N+ G+ K  GCS IE+
Sbjct: 555 ELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEI 614

Query: 438 NNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELVLWHS 497
           ++ VHEF + D+ H +   IY  L E+   L+ AG+ P T+ VL ++++E K+  +  HS
Sbjct: 615 DSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHS 674

Query: 498 EKLALCYALMN--EGSRICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGS 557
           EKLA+ + L++   G+++ I+KNLR+C +CH   KL SK+Y REI+ RDRTRFHH+RDG 
Sbjct: 675 EKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGV 734

Query: 558 CSCKDYW 561
           CSC DYW
Sbjct: 735 CSCNDYW 741

[Close]
BLAST of Carg17425 vs. Swiss-Prot
Match: sp|O82380|PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 2.0e-111
Identity = 195/458 (42.58%), Postives = 290/458 (63.32%), Query Frame = 0 

Query: 138 GQIGDARYVFDQMVEKDLICWS-------------------------------AMISGYT 197
           G I DA+ +FD M EKD + W+                                      
Sbjct: 281 GSIEDAKRLFDAMEEKDNVTWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 340

Query: 198 ESDCPQEALVLFKKMQ-QLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKAL 257
            +  P EAL++F ++Q Q  MK + +T++S +SACA +GAL+  +WI  Y+ K+G     
Sbjct: 341 XNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNF 400

Query: 258 SINNALIDMYAKCGSLEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVE 317
            + +ALI MY+KCG LE +RE+F  + K++V  W++MI  LAMHG  + A+ +F++M+  
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460

Query: 318 NVEPNWITFVGLLYACSHGGLVEEGQRIFHSMINEYGINPKHEHFGCMVDLFGRAKLLRE 377
           NV+PN +TF  +  ACSH GLV+E + +FH M + YGI P+ +H+ C+VD+ GR+  L +
Sbjct: 461 NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEK 520

Query: 378 ALEVVEAMPFAPNAIIWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAK 437
           A++ +EAMP  P+  +WG+L+ AC++H +  L E A  ++L+LEP +DGA V+LSNIYAK
Sbjct: 521 AVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAK 580

Query: 438 ERRWEDAGEVRKLMNEMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQT 497
             +WE+  E+RK M   G+ KE GCS IE++  +HEF   D  H  ++ +Y KL+EV++ 
Sbjct: 581 LGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEK 640

Query: 498 LKLAGYTPQTNCVLVDLDDEEKKELVL-WHSEKLALCYALMNEGSR--ICIIKNLRICED 557
           LK  GY P+ + VL  +++EE KE  L  HSEKLA+CY L++  +   I +IKNLR+C D
Sbjct: 641 LKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGD 700

Query: 558 CHAFMKLASKVYAREIVVRDRTRFHHYRDGSCSCKDYW 561
           CH+  KL S++Y REI+VRDR RFHH+R+G CSC D+W
Sbjct: 701 CHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738

[Close]
BLAST of Carg17425 vs. Swiss-Prot
Match: sp|Q9SI53|PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 1.9e-109
Identity = 207/562 (36.83%), Postives = 310/562 (55.16%), Query Frame = 0 

Query: 1   MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI 60
           MY     + +A  +FD+M QR+V++W+ MI  Y     +  A +L   M R  + P+   
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164

Query: 61  LSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            S++                                                        
Sbjct: 165 YSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKL----------------- 224

Query: 121 XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK 180
                            G+  DA  VFD+MV  D I W+++I G+ ++     AL LFK+
Sbjct: 225 -----------------GEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 284

Query: 181 MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 240
           M++ G   +  T+ SV+ AC  L  L+      +++ K  + + L +NNAL+DMY KCGS
Sbjct: 285 MKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGS 344

Query: 241 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYA 300
           LE A  +F +M +++VI+W++MI+ LA +G +  AL LF +MK    +PN+IT VG+L+A
Sbjct: 345 LEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFA 404

Query: 301 CSHGGLVEEGQRIFHSMINEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 360
           CSH GL+E+G   F SM   YGI+P  EH+GCM+DL G+A  L +A++++  M   P+A+
Sbjct: 405 CSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAV 464

Query: 361 IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN 420
            W +L+ AC++  +  L E+AAK+V+ L+P+  G   +LSNIYA  ++W+   E+R  M 
Sbjct: 465 TWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMR 524

Query: 421 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLV 480
           + G+ KE GCS IE+N ++H F + D  H Q   + +KLN+++  L   GY P+TN VL 
Sbjct: 525 DRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQ 584

Query: 481 DLDDEEKKELVLWHSEKLALCYALMNEGSR--ICIIKNLRICEDCHAFMKLASKVYAREI 540
           DL+ E+ ++ +  HSEKLAL + LM       I I KNLRIC DCH F KLASK+  R I
Sbjct: 585 DLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSI 630

Query: 541 VVRDRTRFHHYRDGSCSCKDYW 561
           V+RD  R+HH++DG CSC DYW
Sbjct: 645 VIRDPIRYHHFQDGKCSCGDYW 630

[Close]
BLAST of Carg17425 vs. Swiss-Prot
Match: sp|Q9SUH6|PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.3e-107
Identity = 183/424 (43.16%), Postives = 274/424 (64.62%), Query Frame = 0 

Query: 139 QIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDVVTMLSVIS 198
           +I  AR +FD+  EK L  W+AMISGYT++   ++A+ LF++MQ+    P+ VT+  ++S
Sbjct: 369 EIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILS 428

Query: 199 ACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGSLEGAREIFGKMPKKNVIS 258
           ACA LGAL   KW+   V    F  ++ ++ ALI MYAKCGS+  AR +F  M KKN ++
Sbjct: 429 ACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVT 488

Query: 259 WTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYACSHGGLVEEGQRIFHSMI 318
           W +MI+   +HG    AL++F++M    + P  +TF+ +LYACSH GLV+EG  IF+SMI
Sbjct: 489 WNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMI 548

Query: 319 NEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAIIWGSLMAACQLHGDTELG 378
           + YG  P  +H+ CMVD+ GRA  L+ AL+ +EAM   P + +W +L+ AC++H DT L 
Sbjct: 549 HRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLA 608

Query: 379 EFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMNEMGVSKERGCSRIELNNE 438
              ++++ +L+PD+ G  V+LSNI++ +R +  A  VR+   +  ++K  G + IE+   
Sbjct: 609 RTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGET 668

Query: 439 VHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLVDLDDEEKKELVLWHSEKL 498
            H F   D+ H Q   IY+KL ++   ++ AGY P+T   L D+++EE++ +V  HSE+L
Sbjct: 669 PHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERL 728

Query: 499 ALCYALM--NEGSRICIIKNLRICEDCHAFMKLASKVYAREIVVRDRTRFHHYRDGSCSC 558
           A+ + L+    G+ I IIKNLR+C DCH   KL SK+  R IVVRD  RFHH++DG CSC
Sbjct: 729 AIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSC 788

Query: 559 KDYW 561
            DYW
Sbjct: 789 GDYW 792

[Close]
BLAST of Carg17425 vs. TrEMBL
Match: tr|I1JAS4|I1JAS4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_01G237100 PE=4 SV=2)

HSP 1 Score: 682.2 bits (1759), Expect = 1.0e-192
Identity = 334/562 (59.43%), Postives = 402/562 (71.53%), Query Frame = 0 

Query: 1   MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI 60
           MY AC RIM+ARLVFDK+S RDVVTW+IMID Y  +G+Y    +L+EEMK +G EPD +I
Sbjct: 88  MYDACGRIMDARLVFDKVSHRDVVTWNIMIDAYSQNGHYAHLLKLYEEMKTSGTEPDAII 147

Query: 61  LSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           L T+                                                        
Sbjct: 148 LCTVLSACGHAGNLSYGKLIHQFTMDNGFRVDSHLQTALVNMYANCAMLSGYAKL----- 207

Query: 121 XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK 180
                            G + DAR++FDQMVEKDL+CW AMISGY ESD P EAL LF +
Sbjct: 208 -----------------GMVQDARFIFDQMVEKDLVCWRAMISGYAESDEPLEALQLFNE 267

Query: 181 MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 240
           MQ+  + PD +TMLSVISAC ++GAL QAKWI  Y DKNGFG+AL INNALIDMYAKCG+
Sbjct: 268 MQRRIIVPDQITMLSVISACTNVGALVQAKWIHTYADKNGFGRALPINNALIDMYAKCGN 327

Query: 241 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYA 300
           L  ARE+F  MP+KNVISW+SMINA AMHGDA +A++LFH+MK +N+EPN +TF+G+LYA
Sbjct: 328 LVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYA 387

Query: 301 CSHGGLVEEGQRIFHSMINEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 360
           CSH GLVEEGQ+ F SMINE+GI+P+ EH+GCMVDL+ RA  LR+A+E++E MPF PN I
Sbjct: 388 CSHAGLVEEGQKFFSSMINEHGISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVI 447

Query: 361 IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN 420
           IWGSLM+ACQ HG+ ELGEFAAKQ+L+LEPDHDGALVVLSNIYAKE+RWED G +RKLM 
Sbjct: 448 IWGSLMSACQNHGEVELGEFAAKQLLELEPDHDGALVVLSNIYAKEKRWEDVGLIRKLMK 507

Query: 421 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLV 480
             G+SKE+ CS+IE+N EVH F MAD  HKQ+D IY+ L+ VV  LKL GYTP T  +LV
Sbjct: 508 HKGISKEKACSKIEVNKEVHVFMMADGYHKQSDEIYKMLDAVVSQLKLVGYTPSTLGILV 567

Query: 481 DLDDEEKKELVLWHSEKLALCYALMNEGSRIC--IIKNLRICEDCHAFMKLASKVYAREI 540
           DL++EEKKE+VLWHSEKLALCY L+ E    C  I+KNLRICEDCH+FMKL SK+Y  EI
Sbjct: 568 DLEEEEKKEVVLWHSEKLALCYGLIGERKESCIRIVKNLRICEDCHSFMKLVSKLYRIEI 627

Query: 541 VVRDRTRFHHYRDGSCSCKDYW 561
           V+RDRT FHH+  G CSC+DYW
Sbjct: 628 VMRDRTWFHHFNGGICSCRDYW 627

[Close]
BLAST of Carg17425 vs. TrEMBL
Match: tr|A0A2P6QWR2|A0A2P6QWR2_ROSCH (Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0415871 PE=4 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 3.3e-188
Identity = 343/562 (61.03%), Postives = 398/562 (70.82%), Query Frame = 0 

Query: 1   MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI 60
           MYAAC R+M+ARLVFDKM  RDVV WSIMIDGYC SG+YD+AF LFEEMK + ++PDEMI
Sbjct: 171 MYAACGRVMDARLVFDKMPSRDVVAWSIMIDGYCQSGHYDIAFNLFEEMKNSDVKPDEMI 230

Query: 61  LSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LSTI                                                        
Sbjct: 231 LSTILSACGRAGKLTYGKAVHDFIEENEIVVDSHILSALIALYAGSGCMDLAQQLFDKTS 290

Query: 121 XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK 180
                XXXXXXXXXXX                                            
Sbjct: 291 EKNFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 350

Query: 181 MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 240
            +  G++PD VTMLSVISACAHLGALDQAKW+ +YVDKNGFG ALS+NNALIDMYAKCGS
Sbjct: 351 XKVSGLRPDQVTMLSVISACAHLGALDQAKWVHLYVDKNGFGGALSVNNALIDMYAKCGS 410

Query: 241 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYA 300
           LE AR +F KMP++NVI+WT+MI+A AMHGDA  AL+ F+QMK+ NVEPN +TFVG+LYA
Sbjct: 411 LERARGVFEKMPRRNVITWTTMISAFAMHGDASNALNFFNQMKLANVEPNGVTFVGVLYA 470

Query: 301 CSHGGLVEEGQRIFHSMINEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 360
           CSH GLVE+G++IF SM+NEY I PKHEH+GCMVDL+GRA LLREALEV+E MP APN +
Sbjct: 471 CSHAGLVEQGRQIFASMVNEYNITPKHEHYGCMVDLYGRANLLREALEVIETMPLAPNVV 530

Query: 361 IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN 420
           IWGSLMAACQ+HG+ ELGEFAAKQVL+LEPDHDGALVVLSNIYAKERRWE+ G VRK+M 
Sbjct: 531 IWGSLMAACQIHGEIELGEFAAKQVLELEPDHDGALVVLSNIYAKERRWEEVGMVRKIMK 590

Query: 421 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLV 480
             G+SK+RGCSRIEL NE++EF MADR HKQAD IY+KL+EVV+ +K  GYTP T  +LV
Sbjct: 591 NNGISKQRGCSRIELKNEIYEFLMADRSHKQADQIYEKLDEVVREVKQVGYTPNTCNILV 650

Query: 481 DLDDEEKKELVLWHSEKLALCYALM--NEGSRICIIKNLRICEDCHAFMKLASKVYAREI 540
           DL++EEKKE +LWHSEKLAL + L+   +GS I I+KNLRICEDCH FMKLASKVY REI
Sbjct: 651 DLEEEEKKEAILWHSEKLALSFGLIGAKKGSCIRIVKNLRICEDCHTFMKLASKVYDREI 710

Query: 541 VVRDRTRFHHYRDGSCSCKDYW 561
           +VRDRTRFHHY+ G CSCKDYW
Sbjct: 711 IVRDRTRFHHYKHGYCSCKDYW 732

[Close]
BLAST of Carg17425 vs. TrEMBL
Match: tr|A0A061EMY0|A0A061EMY0_THECC (Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_020645 PE=4 SV=1)

HSP 1 Score: 664.5 bits (1713), Expect = 2.2e-187
Identity = 341/562 (60.68%), Postives = 394/562 (70.11%), Query Frame = 0 

Query: 1   MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI 60
           MY AC R++EAR VFDKMS RD+V WSIMIDGYC+SG +D A +LFEEMKR  +E D+ I
Sbjct: 161 MYLACGRVLEARSVFDKMSYRDIVAWSIMIDGYCLSGLFDDALELFEEMKRANIEVDKFI 220

Query: 61  LSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LS+I                                                        
Sbjct: 221 LSSILSACGRVGNLNHGKAIHDYIIEKILVVDSHLQSALMTMYASCGCMEMAQKLFNQMA 280

Query: 121 XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK 180
                 XXXXXXXXXX                                            
Sbjct: 281 PKNLVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 340

Query: 181 MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 240
            Q LGM+PD VTMLSVISACAHLG L++AKWI +Y DKNGFG AL INNALIDM+AKCGS
Sbjct: 341 XQSLGMRPDQVTMLSVISACAHLGVLEKAKWIHVYADKNGFGGALPINNALIDMHAKCGS 400

Query: 241 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYA 300
           LE AR +F KM ++NVISWTSMINA A+HGDA+ ALS FH+MK  +VEPN +TFVG+LYA
Sbjct: 401 LERARGVFEKMTRRNVISWTSMINAFAIHGDANNALSFFHKMKEAHVEPNGVTFVGVLYA 460

Query: 301 CSHGGLVEEGQRIFHSMINEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 360
           CSH GLV+EGQRIF SMINE+ I PKHEH+GCMVDLFGRA LLREALE+VE MP APN +
Sbjct: 461 CSHAGLVDEGQRIFASMINEHKIAPKHEHYGCMVDLFGRANLLREALEIVETMPLAPNVV 520

Query: 361 IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN 420
           IWGSLMAACQ+HG+TELGEFAAK++L+LEPDHDGALV+LSNIYAKE++W+D GE+R LM 
Sbjct: 521 IWGSLMAACQIHGETELGEFAAKRLLELEPDHDGALVLLSNIYAKEKKWQDVGELRHLMK 580

Query: 421 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLV 480
           E G+SKE+GCSRIELNNEVHEF MADR HKQAD IY+KL+EV+  LKL GY P T  VLV
Sbjct: 581 ERGISKEKGCSRIELNNEVHEFLMADRNHKQADKIYEKLDEVISQLKLVGYFPNTRSVLV 640

Query: 481 DLDDEEKKELVLWHSEKLALCYALMN--EGSRICIIKNLRICEDCHAFMKLASKVYAREI 540
           DL++EEK+E+VLWHSEKLALCY L+N  + S I I+KNLR+CEDCH FMKL SK+Y REI
Sbjct: 641 DLEEEEKREVVLWHSEKLALCYGLINGEKDSCIRIVKNLRVCEDCHTFMKLVSKLYGREI 700

Query: 541 VVRDRTRFHHYRDGSCSCKDYW 561
           VVRDRTRFHHY+DG CSCKDYW
Sbjct: 701 VVRDRTRFHHYKDGLCSCKDYW 722

[Close]
BLAST of Carg17425 vs. TrEMBL
Match: tr|D7T700|D7T700_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0020g03630 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 2.8e-187
Identity = 346/562 (61.57%), Postives = 391/562 (69.57%), Query Frame = 0 

Query: 1   MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI 60
           MYAAC RI EARL+FDKM  RDVVTWSIMIDGYC SG ++ A  LFEEMK   +EPDEM+
Sbjct: 166 MYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMM 225

Query: 61  LSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LST+                                                        
Sbjct: 226 LSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMT 285

Query: 121 XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK 180
                 XXXXXXXXXX                                            
Sbjct: 286 PKNLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 345

Query: 181 MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 240
              LG+KPD VTMLSVI+ACAHLGALDQAKWI ++VDKNGFG AL INNALI+MYAKCGS
Sbjct: 346 XXSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGS 405

Query: 241 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYA 300
           LE AR IF KMP+KNVISWT MI+A AMHGDA +AL  FHQM+ EN+EPN ITFVG+LYA
Sbjct: 406 LERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYA 465

Query: 301 CSHGGLVEEGQRIFHSMINEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 360
           CSH GLVEEG++IF+SMINE+ I PKH H+GCMVDLFGRA LLREALE+VEAMP APN I
Sbjct: 466 CSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVI 525

Query: 361 IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN 420
           IWGSLMAAC++HG+ ELGEFAAK++L+L+PDHDGA V LSNIYAK RRWED G+VRKLM 
Sbjct: 526 IWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMK 585

Query: 421 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLV 480
             G+SKERGCSR ELNNE+HEF +ADR HK AD IY+KL EVV  LKL GY+P T  +LV
Sbjct: 586 HKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILV 645

Query: 481 DLDDEEKKELVLWHSEKLALCYALMNEGSRIC--IIKNLRICEDCHAFMKLASKVYAREI 540
           DL++EEKKE+VLWHSEKLALCY LM +G+  C  IIKNLR+CEDCH F+KLASKVY REI
Sbjct: 646 DLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREI 705

Query: 541 VVRDRTRFHHYRDGSCSCKDYW 561
           VVRDRTRFHHY+DG CSCKDYW
Sbjct: 706 VVRDRTRFHHYKDGVCSCKDYW 727

[Close]
BLAST of Carg17425 vs. TrEMBL
Match: tr|A0A2N9EHI0|A0A2N9EHI0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1996 PE=4 SV=1)

HSP 1 Score: 659.8 bits (1701), Expect = 5.3e-186
Identity = 350/563 (62.17%), Postives = 395/563 (70.16%), Query Frame = 0 

Query: 1   MYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMI 60
           MYAAC RI+EARLVFDKMS RDVVTWSIMIDGYC +G +D   QLFEEMK + +EPDE++
Sbjct: 175 MYAACGRILEARLVFDKMSHRDVVTWSIMIDGYCQTGLFDDVMQLFEEMKASDVEPDEIV 234

Query: 61  LSTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LS I                                                        
Sbjct: 235 LSKIVSACGHARNLRYGKAIHEFITKNNIVVDPHLQSALVTMYASCGSIDFAQELFNKMS 294

Query: 121 XXXXXXXXXXXXXXXXGGQIGDARYVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKK 180
                 XXXXXXXXXX                                            
Sbjct: 295 TKNLIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 354

Query: 181 MQQLGMKPDVVTMLSVISACAHLGALDQAKWIQIYVDKNGFGKALSINNALIDMYAKCGS 240
            Q LG+ PD VTMLSVISACAHLGALDQAKWI +YVDKNGFG AL INNALIDMYAKCG 
Sbjct: 355 XQVLGINPDQVTMLSVISACAHLGALDQAKWIHLYVDKNGFGGALPINNALIDMYAKCGC 414

Query: 241 LEGAREIFGKMPKKNVISWTSMINALAMHGDAHTALSLFHQMKVENVEPNWITFVGLLYA 300
           LE AR++F KMP+K+VISWTSMI+A AMHG+A+ ALS F+QM+ E +EPN +TFVG+LYA
Sbjct: 415 LERARQVFEKMPRKDVISWTSMISAFAMHGNANDALSFFYQMQDEKIEPNGVTFVGVLYA 474

Query: 301 CSHGGLVEEGQRIFHSMINEYGINPKHEHFGCMVDLFGRAKLLREALEVVEAMPFAPNAI 360
           CSH GLVEEG RIF SMINE+ I PK EH+GCMVDL GRA LLREALE++E MPFAPN +
Sbjct: 475 CSHAGLVEEGHRIFSSMINEHNITPKQEHYGCMVDLLGRANLLREALELIETMPFAPNVV 534

Query: 361 IWGSLMAACQLHGDTELGEFAAKQVLKLEPDHDGALVVLSNIYAKERRWEDAGEVRKLMN 420
           IWGSLMAAC++HG+TELGEFAAK++L+LEPDHDGA VVLSNIYAKERRW+D G VRKLM 
Sbjct: 535 IWGSLMAACRIHGETELGEFAAKRLLELEPDHDGAHVVLSNIYAKERRWDDVGVVRKLMK 594

Query: 421 EMGVSKERGCSRIELNNEVHEFQMADRKHKQADLIYQKLNEVVQTLKLAGYTPQTNCVLV 480
             G+SKERG SRIELNNEVHEF MADR HKQAD IY+KL+EVV  LKL GY P+T+ VLV
Sbjct: 595 HRGISKERGHSRIELNNEVHEFLMADRYHKQADQIYEKLDEVVNELKLVGYAPKTSSVLV 654

Query: 481 DLDDEEKKELVLWHSEKLALCYALMN--EGSRICIIKNLRICEDCHAFMKLASKVYAREI 540
           DL++EEKKE+VL HSEKLALCY LM+  EGS I I+KNLRICEDCH FMKL SKVY REI
Sbjct: 655 DLEEEEKKEVVLLHSEKLALCYGLMSSTEGSCIRIVKNLRICEDCHTFMKLVSKVYEREI 714

Query: 541 VVRDRTRFHHY-RDGSCSCKDYW 561
           VVRDRTRFHHY ++G CSCKDYW
Sbjct: 715 VVRDRTRFHHYNKNGVCSCKDYW 737

The following BLAST results are available for this feature:
BLAST of Carg17425 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022959359.16.0e-28299.82pentatricopeptide repeat-containing protein At4g14820 [Cucurbita moschata] >XP_0... [more]
XP_022974384.11.4e-27597.68pentatricopeptide repeat-containing protein At4g14820-like [Cucurbita maxima] >X... [more]
XP_023538947.11.4e-27597.86pentatricopeptide repeat-containing protein At4g14820 [Cucurbita pepo subsp. pep... [more]
XP_022975407.14.3e-27295.45pentatricopeptide repeat-containing protein At4g14820-like isoform X2 [Cucurbita... [more]
XP_022138165.13.2e-21981.25pentatricopeptide repeat-containing protein At4g14820 [Momordica charantia][more]
BLAST of Carg17425 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G14820.13.1e-16353.17Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G08070.14.6e-11945.67Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G29760.11.1e-11242.58Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G03880.11.0e-11036.83Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G30700.17.4e-10943.16Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Carg17425 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O23337|PP311_ARATH5.5e-16253.17Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana OX... [more]
sp|Q9LN01|PPR21_ARATH8.4e-11845.67Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
sp|O82380|PP175_ARATH2.0e-11142.58Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
sp|Q9SI53|PP147_ARATH1.9e-10936.83Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop... [more]
sp|Q9SUH6|PP341_ARATH1.3e-10743.16Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX... [more]
BLAST of Carg17425 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|I1JAS4|I1JAS4_SOYBN1.0e-19259.43Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_01G237100 PE=4 SV=2[more]
tr|A0A2P6QWR2|A0A2P6QWR2_ROSCH3.3e-18861.03Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS... [more]
tr|A0A061EMY0|A0A061EMY0_THECC2.2e-18760.68Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao OX=3641 GN... [more]
tr|D7T700|D7T700_VITVI2.8e-18761.57Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0020g03630 PE=4 SV=... [more]
tr|A0A2N9EHI0|A0A2N9EHI0_FAGSY5.3e-18662.17Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1996 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR032867DYW_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17425-RACarg17425-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 429..549
e-value: 4.1E-34
score: 117.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 257..291
e-value: 3.6E-8
score: 31.1
coord: 24..58
e-value: 2.2E-10
score: 38.1
coord: 156..190
e-value: 5.3E-7
score: 27.4
coord: 229..255
e-value: 4.1E-4
score: 18.3
coord: 128..155
e-value: 1.9E-5
score: 22.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 330..353
e-value: 0.41
score: 10.9
coord: 401..424
e-value: 1.0
score: 9.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 254..301
e-value: 7.4E-11
score: 42.0
coord: 22..70
e-value: 1.7E-13
score: 50.4
coord: 153..201
e-value: 1.9E-9
score: 37.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 290..325
score: 7.903
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 224..254
score: 8.122
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 392..426
score: 6.654
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 57..91
score: 7.903
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 123..153
score: 8.484
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 22..56
score: 14.25
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 154..188
score: 11.444
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 326..356
score: 5.831
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 92..122
score: 7.015
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 189..223
score: 6.84
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1..21
score: 5.294
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 255..289
score: 11.455
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 228..465
e-value: 3.2E-40
score: 140.4
coord: 124..227
e-value: 4.9E-21
score: 77.4
coord: 1..123
e-value: 5.4E-29
score: 103.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 103..163
coord: 362..415
coord: 231..327
NoneNo IPR availablePANTHERPTHR24015:SF1005SUBFAMILY NOT NAMEDcoord: 139..476
coord: 1..51
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..51
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 42..139
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 139..476
NoneNo IPR availablePANTHERPTHR24015:SF1005SUBFAMILY NOT NAMEDcoord: 42..139

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg17425Cla021618Watermelon (97103) v1carwmB0603
Carg17425Csa3G146570Cucumber (Chinese Long) v2carcuB0633
Carg17425ClCG05G005100Watermelon (Charleston Gray)carwcgB0588
Carg17425CSPI03G13050Wild cucumber (PI 183967)carcpiB0639
Carg17425Cucsa.254370Cucumber (Gy14) v1carcgyB0681
Carg17425CmaCh14G017140Cucurbita maxima (Rimu)carcmaB0847
Carg17425CmaCh06G014020Cucurbita maxima (Rimu)carcmaB0849
Carg17425CmoCh06G014060Cucurbita moschata (Rifu)carcmoB0825
Carg17425Lsi05G016110Bottle gourd (USVL1VR-Ls)carlsiB551
Carg17425Cp4.1LG08g04190Cucurbita pepo (Zucchini)carcpeB0861
Carg17425CsGy3G013210Cucumber (Gy14) v2carcgybB0605
Carg17425CsaV3_3G013200Cucumber (Chinese Long) v3carcucB0640
Carg17425Cla97C05G086260Watermelon (97103) v2carwmbB0631
Carg17425Bhi01G000577Wax gourdcarwgoB0722
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg17425Silver-seed gourdcarcarB347
Carg17425Silver-seed gourdcarcarB545
Carg17425Cucurbita maxima (Rimu)carcmaB0850
Carg17425Cucurbita moschata (Rifu)carcmoB0823
Carg17425Cucurbita moschata (Rifu)carcmoB0824
Carg17425Cucurbita moschata (Rifu)carcmoB0826
Carg17425Cucurbita pepo (Zucchini)carcpeB0857
Carg17425Cucurbita pepo (Zucchini)carcpeB0858
Carg17425Cucurbita pepo (Zucchini)carcpeB0860
Carg17425Bottle gourd (USVL1VR-Ls)carlsiB550
Carg17425Melon (DHL92) v3.5.1carmeB0610
Carg17425Melon (DHL92) v3.6.1carmedB0616
Carg17425Watermelon (Charleston Gray)carwcgB0589
Carg17425Watermelon (97103) v1carwmB0604
Carg17425Watermelon (97103) v2carwmbB0632