BLAST of Cp4.1LG08g04190 vs. Swiss-Prot
Match:
PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1)
HSP 1 Score: 323.2 bits (827), Expect = 3.8e-87
Identity = 173/348 (49.71%), Postives = 233/348 (66.95%), Query Frame = 1
Query: 15 LPPYPTRPTALSAAL---SSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCALSP 74
LPP P TA + L S SL HIKQ+HA ILR+ +S LF L +SS +++
Sbjct: 3 LPP-PIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHK-LNSFLFNLSVSSSSIN- 62
Query: 75 SLDYALSVFDQIPEPKTRFC-NKLLRELSRGSEPENALFLYEKMRAEGLSLDRFCFPPLL 134
L YAL+VF IP P N LR+LSR SEP + Y+++R G LD+F F P+L
Sbjct: 63 -LSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPIL 122
Query: 135 KAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDVV 194
KA S+ +L GME+HG+A K+ DPFVETG + MYA+C RI AR VFD+MS RDVV
Sbjct: 123 KAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVV 182
Query: 195 TWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKIHEFI 254
TW+ MI+ YC G D AF+LFEEMK + + PDEMIL I+SAC R GN+ + I+EF+
Sbjct: 183 TWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL 242
Query: 255 TKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQIGDAR 314
+N++ MD HL +AL+ MYA G D+A + + K++ +N+ +STAMVSG +K G++ DA+
Sbjct: 243 IENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQ 302
Query: 315 CVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
+FDQ +KDL+CW+ MIS Y ESD PQEAL +F++M G+KPD+VS
Sbjct: 303 VIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVS 346
BLAST of Cp4.1LG08g04190 vs. Swiss-Prot
Match:
PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 200.7 bits (509), Expect = 2.8e-50
Identity = 123/357 (34.45%), Postives = 200/357 (56.02%), Query Frame = 1
Query: 12 PLHLPPYPT-----RPTALS------AALSSATSLLHIKQVHAQILRS-KFERSDSDSLL 71
PL LP +P +PT + + + SL +KQ H ++R+ F S S L
Sbjct: 9 PLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKL 68
Query: 72 FKLI-LSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEG 131
F + LSS A SL+YA VFD+IP+P + N L+R + G +P +++ + M +E
Sbjct: 69 FAMAALSSFA---SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSES 128
Query: 132 LSL-DRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEA 191
+++ FP L+KAA+ SL G +HG+A K GSD FV LI Y +C + A
Sbjct: 129 QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSA 188
Query: 192 RLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARA 251
VF + ++DVV+W+ MI+G+ G D A +LF++M+ ++ + + +LSACA+
Sbjct: 189 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI 248
Query: 252 GNLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMV 311
NL+FG ++ +I +N + ++ L +A++ MY CGS + A L++ + K+ V T M+
Sbjct: 249 RNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 308
Query: 312 SGLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ-QLGMK 354
G A AR V + M +KD++ W+A+IS Y ++ P EAL++F ++Q Q MK
Sbjct: 309 DGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMK 362
BLAST of Cp4.1LG08g04190 vs. Swiss-Prot
Match:
PP235_ARATH (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2)
HSP 1 Score: 185.7 bits (470), Expect = 9.4e-46
Identity = 102/319 (31.97%), Postives = 175/319 (54.86%), Query Frame = 1
Query: 39 KQVHAQILRSKFERSDSDSLLFKLILSSCA-LSPSLDYALSVFDQIPEPKTRFCNKLLRE 98
KQ+H+Q + + + + KL + C+ L + YA +F +IPEP N +++
Sbjct: 51 KQLHSQSITRGV--APNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKG 110
Query: 99 LSRGSEPENALFLYEKMRAEGLSLDRFCFPPLLKAASRNL-SLRTGMEIHGLASKLGFGS 158
S+ + LY M EG++ D FP LL R+ +L G ++H K G GS
Sbjct: 111 WSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGS 170
Query: 159 DPFVETGLIRMYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMK 218
+ +V+ L++MY+ C + AR VFD+ + DV +W++MI GY Y+ + +L EM+
Sbjct: 171 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 230
Query: 219 RTGLEPDEMILSTILSACARAGNLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTD 278
R + P + L +LSAC++ + D ++HE++++ L++AL+ YA+CG D
Sbjct: 231 RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMD 290
Query: 279 LAWDLYEKITPKNMVISTAMVSGLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDC 338
+A ++ + ++++ T++V G + G + AR FDQM +D I W+ MI GY + C
Sbjct: 291 IAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGC 350
Query: 339 PQEALVLFKKMQQLGMKPD 356
E+L +F++MQ GM PD
Sbjct: 351 FNESLEIFREMQSAGMIPD 367
BLAST of Cp4.1LG08g04190 vs. Swiss-Prot
Match:
PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1)
HSP 1 Score: 181.0 bits (458), Expect = 2.3e-44
Identity = 105/339 (30.97%), Postives = 180/339 (53.10%), Query Frame = 1
Query: 25 LSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCALSPS--LDYALSVFDQ 84
L + L LLH+KQ+ AQ++ + D +++ CALS S LDY++ +
Sbjct: 56 LLSLLEKCKLLLHLKQIQAQMIINGLIL---DPFASSRLIAFCALSESRYLDYSVKILKG 115
Query: 85 IPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLSL---DRFCFPPLLKAASRNLSL 144
I P N +R S P+ + LY++M G D F +P L K +
Sbjct: 116 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 175
Query: 145 RTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDVVTWSIMIDGY 204
G I G KL V I M+A+C + AR VFD+ RD+V+W+ +I+GY
Sbjct: 176 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 235
Query: 205 CISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKIHEFITKNNIVMDP 264
G + A +++ M+ G++PD++ + ++S+C+ G+L+ G + +E++ +N + M
Sbjct: 236 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 295
Query: 265 HLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQIGDARCVFDQMVEK 324
L +AL+ M++ CG A +++ + + +V T M+SG A+ G + +R +FD M EK
Sbjct: 296 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 355
Query: 325 DLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
D++ W+AMI G ++ Q+AL LF++MQ KPD ++
Sbjct: 356 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT 391
BLAST of Cp4.1LG08g04190 vs. Swiss-Prot
Match:
PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 180.6 bits (457), Expect = 3.0e-44
Identity = 101/298 (33.89%), Postives = 169/298 (56.71%), Query Frame = 1
Query: 26 SAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCALSPSLDYALSVFDQIPE 85
++ + SAT +KQ+HA++L + S L+ KLI +S + + +A VFD +P
Sbjct: 25 ASLIDSATHKAQLKQIHARLLVLGLQFSGF--LITKLIHASSSFG-DITFARQVFDDLPR 84
Query: 86 PKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLSLDRFCFPPLLKAASRNLSLRTGMEI 145
P+ N ++R SR + ++AL +Y M+ +S D F FP LLKA S L+ G +
Sbjct: 85 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 144
Query: 146 HGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFD--KMSQRDVVTWSIMIDGYCISG 205
H +LGF +D FV+ GLI +YA CRR+ AR VF+ + +R +V+W+ ++ Y +G
Sbjct: 145 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 204
Query: 206 YYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKIHEFITKNNIVMDPHLQS 265
A ++F +M++ ++PD + L ++L+A +L G IH + K + ++P L
Sbjct: 205 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 264
Query: 266 ALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQIGDARCVFDQMVEKDL 322
+L MYA CG A L++K+ N+++ AM+SG AK G +A +F +M+ KD+
Sbjct: 265 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV 319
BLAST of Cp4.1LG08g04190 vs. TrEMBL
Match:
D7T700_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03630 PE=4 SV=1)
HSP 1 Score: 476.5 bits (1225), Expect = 3.0e-131
Identity = 244/361 (67.59%), Postives = 288/361 (79.78%), Query Frame = 1
Query: 4 LSHTTSILPLHLPPYPTRPTALSA------ALSSATSLLHIKQVHAQILRSKFERSDSDS 63
+S T LP + P P PT L + ALSSATSL H+KQVHAQILRSK +RS S
Sbjct: 1 MSQTALALPPN--PNPATPTTLHSHHTLFSALSSATSLTHLKQVHAQILRSKLDRSTS-- 60
Query: 64 LLFKLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAE 123
LL KL++SSCALS SLDYALSVF+ IP+P+T CN+ LRELSR EPE L +YE+MR +
Sbjct: 61 LLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQ 120
Query: 124 GLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEA 183
GL++DRF FPPLLKA SR SL G+EIHGLA+KLGF SDPFV+TGL+RMYAAC RI EA
Sbjct: 121 GLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEA 180
Query: 184 RLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARA 243
RL+FDKM RDVVTWSIMIDGYC SG ++ A LFEEMK +EPDEM+LST+LSAC RA
Sbjct: 181 RLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRA 240
Query: 244 GNLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMV 303
GNL +G IH+FI +NNIV+DPHLQSAL+ MYASCGS DLA +L+EK+TPKN+V STAMV
Sbjct: 241 GNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMV 300
Query: 304 SGLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIV 359
+G +K GQI +AR VF+QMV+KDL+CWSAMISGY ESD PQEAL LF +MQ LG+KPD V
Sbjct: 301 TGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQV 357
BLAST of Cp4.1LG08g04190 vs. TrEMBL
Match:
W9R134_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005425 PE=4 SV=1)
HSP 1 Score: 422.9 bits (1086), Expect = 3.9e-115
Identity = 215/360 (59.72%), Postives = 275/360 (76.39%), Query Frame = 1
Query: 1 METLSHTTSI-LPLHLPPYPTRPTALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLL 60
M +L +T + L LPP PT L+ ALSSAT+ H+KQ HAQILRSK + +S LL
Sbjct: 1 MSSLPESTLLSLSPALPPNPTT-ATLATALSSATTTSHLKQFHAQILRSKLDHPNS-LLL 60
Query: 61 FKLILSSCALS-PSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEG 120
KL L+SC LS PSLDYALSVF +IP+P+ R NKLLRE+SR + + L +Y +MR EG
Sbjct: 61 LKLALASCVLSPPSLDYALSVFARIPDPEPRLSNKLLREVSRRGDADKTLLVYGRMRREG 120
Query: 121 LSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEAR 180
S+DR+ FP +LKAA + +L G EIHGLA+K+GF SDPFV+TGL+RMYA C RI++ R
Sbjct: 121 SSVDRYSFPAVLKAAGKTQALEEGREIHGLATKMGFDSDPFVQTGLVRMYAGCGRILDGR 180
Query: 181 LVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAG 240
LVFDKMSQRDVV WSIMIDGY S +D F L+EEM+ +G+EPDEMILSTILSAC RAG
Sbjct: 181 LVFDKMSQRDVVAWSIMIDGYSQSRLFDNVFNLYEEMRNSGVEPDEMILSTILSACGRAG 240
Query: 241 NLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVS 300
NL G IH+F+ +N+++ D L+SAL+ MYASCGS D+A +L++K++ KN+V+STAM+S
Sbjct: 241 NLSCGKAIHDFVVENSLLADSRLRSALVAMYASCGSMDIAQELFDKMSSKNLVVSTAMIS 300
Query: 301 GLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
G +K G++ DAR +FDQMVEKDL+ WSAMI+GY ESD PQEAL LF MQ LG++PD ++
Sbjct: 301 GYSKLGRLQDARLIFDQMVEKDLVSWSAMIAGYAESDWPQEALRLFNDMQLLGIRPDQIT 358
BLAST of Cp4.1LG08g04190 vs. TrEMBL
Match:
V4S8H9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004433mg PE=4 SV=1)
HSP 1 Score: 407.1 bits (1045), Expect = 2.2e-110
Identity = 201/346 (58.09%), Postives = 257/346 (74.28%), Query Frame = 1
Query: 19 PTRPTAL--SAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCALSP----S 78
PT+P L S A+SS +SL H+KQ HAQIL+ +SLL KL+L+S +L S
Sbjct: 7 PTKPLTLPTSTAISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSS 66
Query: 79 LDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLSLDRFCFPPLLKA 138
L YALS+F QIP P +R NK +R +S P++AL ++ KM EGL++DRF FPP+LKA
Sbjct: 67 LYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKA 126
Query: 139 ASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDVVTW 198
+R L GM++HGL +KLGFGSDPFV+TGL+ MY AC RI++ARL+FDKMS RD+V W
Sbjct: 127 IARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGRILDARLMFDKMSYRDIVPW 186
Query: 199 SIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKIHEFITK 258
S+MIDGY +G +D LFEEMK + +EPDEM+LS ILSAC+RAGNL +G +HEFI
Sbjct: 187 SVMIDGYFQNGLFDDVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIID 246
Query: 259 NNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQIGDARCV 318
NN+ +D HLQS LI MYA+CG D+A L++K+ KN+V+STAMVSG ++ GQ+ DAR +
Sbjct: 247 NNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLI 306
Query: 319 FDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
FDQMVEKDLICWSAMISGY E++ PQEAL LF +MQ GMKPD V+
Sbjct: 307 FDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVT 352
BLAST of Cp4.1LG08g04190 vs. TrEMBL
Match:
A0A067GGS0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004938mg PE=4 SV=1)
HSP 1 Score: 406.4 bits (1043), Expect = 3.8e-110
Identity = 200/346 (57.80%), Postives = 257/346 (74.28%), Query Frame = 1
Query: 19 PTRPTAL--SAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCALSP----S 78
PT+P L S A+SS +SL H+KQ HAQIL+ +SLL KL+L+S +L S
Sbjct: 7 PTKPLTLPTSTAISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSS 66
Query: 79 LDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLSLDRFCFPPLLKA 138
L YALS+F QIP P +R NK +R +S P++AL ++ KM EGL++DRF FPP+LKA
Sbjct: 67 LYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKA 126
Query: 139 ASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDVVTW 198
+R L GM++HGL +KLGFGSDPFV+TGL+ MY AC +I++ARL+FDKMS RD+V W
Sbjct: 127 IARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPW 186
Query: 199 SIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKIHEFITK 258
S+MIDGY +G +D LFEEMK + +EPDEM+LS ILSAC+RAGNL +G +HEFI
Sbjct: 187 SVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIID 246
Query: 259 NNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQIGDARCV 318
NN+ +D HLQS LI MYA+CG D+A L++K+ KN+V+STAMVSG ++ GQ+ DAR +
Sbjct: 247 NNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLI 306
Query: 319 FDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
FDQMVEKDLICWSAMISGY E++ PQEAL LF +MQ GMKPD V+
Sbjct: 307 FDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVT 352
BLAST of Cp4.1LG08g04190 vs. TrEMBL
Match:
A0A067L6S3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02188 PE=4 SV=1)
HSP 1 Score: 401.7 bits (1031), Expect = 9.3e-109
Identity = 203/353 (57.51%), Postives = 265/353 (75.07%), Query Frame = 1
Query: 7 TTSILPLHLPPYPTRPTALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSS 66
T+ LPL L T L SS+TSL H+KQVHAQILRS S S+L KLILSS
Sbjct: 5 TSPALPLPLSSATIHTTLLPFLSSSSTSLYHLKQVHAQILRSSL----SPSILLKLILSS 64
Query: 67 CALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGL-SLDRFC 126
+ SL+YALSVF +P P+ NK LR LSR S+PE L +YEK+R +GL +DRF
Sbjct: 65 SSSISSLEYALSVFTHLPTPRPALSNKFLRALSRSSKPETVLLVYEKIREDGLFGVDRFS 124
Query: 127 FPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMS 186
P LLKAA++ +L GMEIHG+A+KLGF DPFV+TGL+ +Y AC +I+EARLVFDKMS
Sbjct: 125 LPLLLKAAAKVSALNEGMEIHGVATKLGFDKDPFVQTGLMSLYLACGKILEARLVFDKMS 184
Query: 187 QRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTK 246
RDVVTWSIMI+GY +G++D A + FEEMK + ++PD+++LSTI+SAC+RAGNL +G
Sbjct: 185 YRDVVTWSIMINGYYQNGHFDEALKFFEEMKSSNVQPDKVVLSTIISACSRAGNLSYGKA 244
Query: 247 IHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQ 306
+H+FI +NNI +DPHL+S LI MYA+CG D+A +L+ K++ +N+V+STAMVSG ++ G
Sbjct: 245 VHDFIIENNIEVDPHLESTLIFMYANCGCMDMAKELFFKMSSRNLVVSTAMVSGYSRVGN 304
Query: 307 IGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
+ DAR +FD+M +KDL+CWSAMISGY ESD PQEAL LF +MQ LG++PD V+
Sbjct: 305 VKDARLIFDEMDKKDLVCWSAMISGYAESDQPQEALNLFNEMQALGIEPDEVT 353
BLAST of Cp4.1LG08g04190 vs. TAIR10
Match:
AT4G14820.1 (AT4G14820.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 323.2 bits (827), Expect = 2.1e-88
Identity = 173/348 (49.71%), Postives = 233/348 (66.95%), Query Frame = 1
Query: 15 LPPYPTRPTALSAAL---SSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCALSP 74
LPP P TA + L S SL HIKQ+HA ILR+ +S LF L +SS +++
Sbjct: 3 LPP-PIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHK-LNSFLFNLSVSSSSIN- 62
Query: 75 SLDYALSVFDQIPEPKTRFC-NKLLRELSRGSEPENALFLYEKMRAEGLSLDRFCFPPLL 134
L YAL+VF IP P N LR+LSR SEP + Y+++R G LD+F F P+L
Sbjct: 63 -LSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPIL 122
Query: 135 KAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDVV 194
KA S+ +L GME+HG+A K+ DPFVETG + MYA+C RI AR VFD+MS RDVV
Sbjct: 123 KAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVV 182
Query: 195 TWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKIHEFI 254
TW+ MI+ YC G D AF+LFEEMK + + PDEMIL I+SAC R GN+ + I+EF+
Sbjct: 183 TWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL 242
Query: 255 TKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQIGDAR 314
+N++ MD HL +AL+ MYA G D+A + + K++ +N+ +STAMVSG +K G++ DA+
Sbjct: 243 IENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQ 302
Query: 315 CVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
+FDQ +KDL+CW+ MIS Y ESD PQEAL +F++M G+KPD+VS
Sbjct: 303 VIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVS 346
BLAST of Cp4.1LG08g04190 vs. TAIR10
Match:
AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 200.7 bits (509), Expect = 1.6e-51
Identity = 123/357 (34.45%), Postives = 200/357 (56.02%), Query Frame = 1
Query: 12 PLHLPPYPT-----RPTALS------AALSSATSLLHIKQVHAQILRS-KFERSDSDSLL 71
PL LP +P +PT + + + SL +KQ H ++R+ F S S L
Sbjct: 9 PLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKL 68
Query: 72 FKLI-LSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEG 131
F + LSS A SL+YA VFD+IP+P + N L+R + G +P +++ + M +E
Sbjct: 69 FAMAALSSFA---SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSES 128
Query: 132 LSL-DRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEA 191
+++ FP L+KAA+ SL G +HG+A K GSD FV LI Y +C + A
Sbjct: 129 QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSA 188
Query: 192 RLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARA 251
VF + ++DVV+W+ MI+G+ G D A +LF++M+ ++ + + +LSACA+
Sbjct: 189 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI 248
Query: 252 GNLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMV 311
NL+FG ++ +I +N + ++ L +A++ MY CGS + A L++ + K+ V T M+
Sbjct: 249 RNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 308
Query: 312 SGLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ-QLGMK 354
G A AR V + M +KD++ W+A+IS Y ++ P EAL++F ++Q Q MK
Sbjct: 309 DGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMK 362
BLAST of Cp4.1LG08g04190 vs. TAIR10
Match:
AT3G15930.1 (AT3G15930.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 185.7 bits (470), Expect = 5.3e-47
Identity = 102/319 (31.97%), Postives = 175/319 (54.86%), Query Frame = 1
Query: 39 KQVHAQILRSKFERSDSDSLLFKLILSSCA-LSPSLDYALSVFDQIPEPKTRFCNKLLRE 98
KQ+H+Q + + + + KL + C+ L + YA +F +IPEP N +++
Sbjct: 51 KQLHSQSITRGV--APNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKG 110
Query: 99 LSRGSEPENALFLYEKMRAEGLSLDRFCFPPLLKAASRNL-SLRTGMEIHGLASKLGFGS 158
S+ + LY M EG++ D FP LL R+ +L G ++H K G GS
Sbjct: 111 WSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGS 170
Query: 159 DPFVETGLIRMYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMK 218
+ +V+ L++MY+ C + AR VFD+ + DV +W++MI GY Y+ + +L EM+
Sbjct: 171 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 230
Query: 219 RTGLEPDEMILSTILSACARAGNLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTD 278
R + P + L +LSAC++ + D ++HE++++ L++AL+ YA+CG D
Sbjct: 231 RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMD 290
Query: 279 LAWDLYEKITPKNMVISTAMVSGLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDC 338
+A ++ + ++++ T++V G + G + AR FDQM +D I W+ MI GY + C
Sbjct: 291 IAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGC 350
Query: 339 PQEALVLFKKMQQLGMKPD 356
E+L +F++MQ GM PD
Sbjct: 351 FNESLEIFREMQSAGMIPD 367
BLAST of Cp4.1LG08g04190 vs. TAIR10
Match:
AT2G22410.1 (AT2G22410.1 SLOW GROWTH 1)
HSP 1 Score: 181.0 bits (458), Expect = 1.3e-45
Identity = 105/339 (30.97%), Postives = 180/339 (53.10%), Query Frame = 1
Query: 25 LSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCALSPS--LDYALSVFDQ 84
L + L LLH+KQ+ AQ++ + D +++ CALS S LDY++ +
Sbjct: 56 LLSLLEKCKLLLHLKQIQAQMIINGLIL---DPFASSRLIAFCALSESRYLDYSVKILKG 115
Query: 85 IPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLSL---DRFCFPPLLKAASRNLSL 144
I P N +R S P+ + LY++M G D F +P L K +
Sbjct: 116 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 175
Query: 145 RTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDVVTWSIMIDGY 204
G I G KL V I M+A+C + AR VFD+ RD+V+W+ +I+GY
Sbjct: 176 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 235
Query: 205 CISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKIHEFITKNNIVMDP 264
G + A +++ M+ G++PD++ + ++S+C+ G+L+ G + +E++ +N + M
Sbjct: 236 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 295
Query: 265 HLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQIGDARCVFDQMVEK 324
L +AL+ M++ CG A +++ + + +V T M+SG A+ G + +R +FD M EK
Sbjct: 296 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 355
Query: 325 DLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
D++ W+AMI G ++ Q+AL LF++MQ KPD ++
Sbjct: 356 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT 391
BLAST of Cp4.1LG08g04190 vs. TAIR10
Match:
AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)
HSP 1 Score: 180.6 bits (457), Expect = 1.7e-45
Identity = 101/298 (33.89%), Postives = 169/298 (56.71%), Query Frame = 1
Query: 26 SAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCALSPSLDYALSVFDQIPE 85
++ + SAT +KQ+HA++L + S L+ KLI +S + + +A VFD +P
Sbjct: 25 ASLIDSATHKAQLKQIHARLLVLGLQFSGF--LITKLIHASSSFG-DITFARQVFDDLPR 84
Query: 86 PKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLSLDRFCFPPLLKAASRNLSLRTGMEI 145
P+ N ++R SR + ++AL +Y M+ +S D F FP LLKA S L+ G +
Sbjct: 85 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 144
Query: 146 HGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFD--KMSQRDVVTWSIMIDGYCISG 205
H +LGF +D FV+ GLI +YA CRR+ AR VF+ + +R +V+W+ ++ Y +G
Sbjct: 145 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 204
Query: 206 YYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKIHEFITKNNIVMDPHLQS 265
A ++F +M++ ++PD + L ++L+A +L G IH + K + ++P L
Sbjct: 205 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 264
Query: 266 ALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQIGDARCVFDQMVEKDL 322
+L MYA CG A L++K+ N+++ AM+SG AK G +A +F +M+ KD+
Sbjct: 265 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV 319
BLAST of Cp4.1LG08g04190 vs. NCBI nr
Match:
gi|225432698|ref|XP_002278762.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Vitis vinifera])
HSP 1 Score: 476.5 bits (1225), Expect = 4.2e-131
Identity = 244/361 (67.59%), Postives = 288/361 (79.78%), Query Frame = 1
Query: 4 LSHTTSILPLHLPPYPTRPTALSA------ALSSATSLLHIKQVHAQILRSKFERSDSDS 63
+S T LP + P P PT L + ALSSATSL H+KQVHAQILRSK +RS S
Sbjct: 1 MSQTALALPPN--PNPATPTTLHSHHTLFSALSSATSLTHLKQVHAQILRSKLDRSTS-- 60
Query: 64 LLFKLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAE 123
LL KL++SSCALS SLDYALSVF+ IP+P+T CN+ LRELSR EPE L +YE+MR +
Sbjct: 61 LLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQ 120
Query: 124 GLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEA 183
GL++DRF FPPLLKA SR SL G+EIHGLA+KLGF SDPFV+TGL+RMYAAC RI EA
Sbjct: 121 GLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEA 180
Query: 184 RLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARA 243
RL+FDKM RDVVTWSIMIDGYC SG ++ A LFEEMK +EPDEM+LST+LSAC RA
Sbjct: 181 RLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRA 240
Query: 244 GNLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMV 303
GNL +G IH+FI +NNIV+DPHLQSAL+ MYASCGS DLA +L+EK+TPKN+V STAMV
Sbjct: 241 GNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMV 300
Query: 304 SGLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIV 359
+G +K GQI +AR VF+QMV+KDL+CWSAMISGY ESD PQEAL LF +MQ LG+KPD V
Sbjct: 301 TGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQV 357
BLAST of Cp4.1LG08g04190 vs. NCBI nr
Match:
gi|1009141445|ref|XP_015888199.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Ziziphus jujuba])
HSP 1 Score: 466.8 bits (1200), Expect = 3.4e-128
Identity = 238/361 (65.93%), Postives = 283/361 (78.39%), Query Frame = 1
Query: 1 METLSHTTSILPLH--LPPYPTRPTALSAALSSATSLLHIKQVHAQILRSKFERSDSDSL 60
M L+ TT LP + P + L ALS++T++ +KQVHAQILRSK +RS+ L
Sbjct: 1 MSALAQTTLALPPNPSFTPNSAAYSTLFTALSTSTTITQLKQVHAQILRSKLDRSNP--L 60
Query: 61 LFKLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEG 120
L KL+LSSC LSPSLDYALSVF+QI P T+FCNK LRELSR +EP AL +Y KMR+EG
Sbjct: 61 LIKLVLSSCVLSPSLDYALSVFNQISNPPTQFCNKFLRELSRRAEPSKALLVYGKMRSEG 120
Query: 121 LS-LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEA 180
L +DRF FPP+LKA SR +L GMEIHG+ASKLGF DPFV+TGL+RMYAAC RIMEA
Sbjct: 121 LGGVDRFSFPPILKAVSRAEALTEGMEIHGVASKLGFDKDPFVQTGLVRMYAACGRIMEA 180
Query: 181 RLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARA 240
RL+FDKMS RDVVTWSIMIDGYC SG +D F LFEEMK + +EPD MILST+LSAC RA
Sbjct: 181 RLMFDKMSHRDVVTWSIMIDGYCQSGLFDYVFHLFEEMKSSSVEPDGMILSTVLSACGRA 240
Query: 241 GNLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMV 300
GNL +G IH+FIT+NN+V+D HL SAL+ MYASCGS DLA Y K++PK++V STAMV
Sbjct: 241 GNLGYGRAIHDFITENNVVLDSHLNSALVAMYASCGSMDLARQFYNKMSPKSLVASTAMV 300
Query: 301 SGLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIV 359
SG +K GQI DAR +F+Q+VEKDLICWSAMISGY ESD PQEAL LF +MQ LG++PD V
Sbjct: 301 SGYSKLGQIEDARLIFNQLVEKDLICWSAMISGYAESDLPQEALRLFNEMQVLGIRPDQV 359
BLAST of Cp4.1LG08g04190 vs. NCBI nr
Match:
gi|694437735|ref|XP_009345879.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like [Pyrus x bretschneideri])
HSP 1 Score: 459.1 bits (1180), Expect = 7.0e-126
Identity = 230/360 (63.89%), Postives = 280/360 (77.78%), Query Frame = 1
Query: 1 METLSHTTSILPLHLPPYPTRPTALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
M +L HTT LP H PYP P LS A+SSA SL H+KQVHAQIL+S +R DS LL+
Sbjct: 1 MSSLPHTTLALPPHPNPYPNTPATLSTAVSSARSLTHLKQVHAQILKSNLDRPDS--LLY 60
Query: 61 KLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLS 120
L+LSSC LSPSL Y LS+F+QIP+P+ CNKLLRE SR +EP+ AL +YE+MR E +
Sbjct: 61 NLLLSSCTLSPSLHYPLSIFNQIPKPQIHMCNKLLREFSRCAEPDKALLVYERMRREDVG 120
Query: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
+DRF PPLLKA +R +L GMEIHG+A KLGF SDPFVETGL+RMYAAC RIM+ARLV
Sbjct: 121 VDRFSIPPLLKAVARASALSEGMEIHGVAWKLGFHSDPFVETGLVRMYAACGRIMDARLV 180
Query: 181 FDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLE--PDEMILSTILSACARAG 240
FDKMS+RDVV WSIMI+GYC SG++D AF+LFEEMK + E PDEMILS ILSAC AG
Sbjct: 181 FDKMSRRDVVAWSIMINGYCQSGHFDTAFRLFEEMKNSNAEPDPDEMILSAILSACGHAG 240
Query: 241 NLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVS 300
L +G IH+FI +N+IV+D HL+SALI MYA GS DLA L++K + KN V++TAMVS
Sbjct: 241 KLAYGKAIHDFIMENDIVVDSHLRSALIAMYAGSGSMDLAQQLFDKTSQKNFVVATAMVS 300
Query: 301 GLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
G +K G++ DAR +FDQ+VEKDL+CWSAMISGY ESD PQEAL LF +M+ G++PD V+
Sbjct: 301 GYSKLGRVEDARLIFDQIVEKDLVCWSAMISGYAESDRPQEALRLFAEMEASGLRPDPVT 358
BLAST of Cp4.1LG08g04190 vs. NCBI nr
Match:
gi|694388278|ref|XP_009369855.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like [Pyrus x bretschneideri])
HSP 1 Score: 457.2 bits (1175), Expect = 2.7e-125
Identity = 230/360 (63.89%), Postives = 279/360 (77.50%), Query Frame = 1
Query: 1 METLSHTTSILPLHLPPYPTRPTALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
M +L HTT LP H PYP P LS A+SSA SL H+KQVHAQIL+S +R DS LLF
Sbjct: 1 MSSLPHTTLALPPHPNPYPNTPATLSTAVSSARSLTHLKQVHAQILKSNLDRPDS--LLF 60
Query: 61 KLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLS 120
L+LSSC LSPSL Y LS+F+QIP+P+ CNKLLRE SR +EP+ AL +YE+MR E +
Sbjct: 61 NLLLSSCTLSPSLHYPLSIFNQIPKPQIHLCNKLLREFSRCAEPDKALLVYERMRREDVG 120
Query: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
+DRF PPLLKA +R +L GMEIHG+A KLGF SDPFVETGL+RMYAA RIM+ARL+
Sbjct: 121 VDRFSIPPLLKAVARASALSEGMEIHGVAWKLGFDSDPFVETGLVRMYAASGRIMDARLM 180
Query: 181 FDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLE--PDEMILSTILSACARAG 240
FDKMS+RDVV WSIMI+GYC SG++D AF+LFEEMK + E PDEMILS ILSAC AG
Sbjct: 181 FDKMSRRDVVAWSIMINGYCQSGHFDTAFRLFEEMKNSNAEPDPDEMILSAILSACGHAG 240
Query: 241 NLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVS 300
L +G IH+FI +N+IV+D HLQSALI MYA GS DLA L++K + KN V++TAMVS
Sbjct: 241 KLAYGKAIHDFIMENDIVVDSHLQSALIAMYAGSGSMDLAQQLFDKTSQKNFVVATAMVS 300
Query: 301 GLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
G +K G++ DAR +FDQ+VEKDL+CWSAMISGY ESD PQEAL LF +M+ G++PD V+
Sbjct: 301 GYSKLGRVEDARLIFDQIVEKDLVCWSAMISGYAESDQPQEALRLFAEMEASGLRPDPVT 358
BLAST of Cp4.1LG08g04190 vs. NCBI nr
Match:
gi|658011498|ref|XP_008340993.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Malus domestica])
HSP 1 Score: 451.8 bits (1161), Expect = 1.1e-123
Identity = 227/360 (63.06%), Postives = 277/360 (76.94%), Query Frame = 1
Query: 1 METLSHTTSILPLHLPPYPTRPTALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
M +L HTT LP H PYP P LS A+S A SL H++QVHAQIL+S +R D SLLF
Sbjct: 1 MSSLPHTTLALPPHPNPYPNTPATLSTAVSXARSLTHLRQVHAQILKSNLDRPD--SLLF 60
Query: 61 KLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLS 120
L+LSSC LSPSL Y LS+F+QI +P+ CNKLLRE SR +EP+ AL +YE+MR E +
Sbjct: 61 NLLLSSCTLSPSLHYPLSIFNQIXKPQIHLCNKLLREFSRRAEPDKALLVYERMRREDVG 120
Query: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
+DRF PPLLKA +R +L GMEIH +A KLGF SDPFVETGL+RMYAAC RIM+ARLV
Sbjct: 121 VDRFSIPPLLKAVARASALSEGMEIHXVAWKLGFHSDPFVETGLVRMYAACGRIMDARLV 180
Query: 181 FDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLE--PDEMILSTILSACARAG 240
FDKMS+RDVV WSIMI+GYC SG++D AF+LFEEMK + E PDEMILS ILSAC AG
Sbjct: 181 FDKMSRRDVVAWSIMINGYCQSGHFDTAFRLFEEMKNSNAEPDPDEMILSAILSACGHAG 240
Query: 241 NLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVS 300
L +G IH+FI +N+IV+D HL+SALI MYA GS DLA L++K + KN V++TAMVS
Sbjct: 241 KLAYGKAIHDFIMENDIVVDSHLRSALIAMYAGSGSMDLAQQLFDKTSQKNFVVATAMVS 300
Query: 301 GLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
G +K G++ DAR +FDQ+VEKDL+CWSAMISGY ESD PQEAL LF +M+ G++PD V+
Sbjct: 301 GYSKLGRVEDARLIFDQIVEKDLVCWSAMISGYAESDRPQEALRLFAEMEASGLRPDPVT 358
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP311_ARATH | 3.8e-87 | 49.71 | Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN... | [more] |
| PP175_ARATH | 2.8e-50 | 34.45 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
| PP235_ARATH | 9.4e-46 | 31.97 | Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th... | [more] |
| PP169_ARATH | 2.3e-44 | 30.97 | Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... | [more] |
| PP224_ARATH | 3.0e-44 | 33.89 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| D7T700_VITVI | 3.0e-131 | 67.59 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03630 PE=4 SV=... | [more] |
| W9R134_9ROSA | 3.9e-115 | 59.72 | Uncharacterized protein OS=Morus notabilis GN=L484_005425 PE=4 SV=1 | [more] |
| V4S8H9_9ROSI | 2.2e-110 | 58.09 | Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004433mg PE=4 SV=1 | [more] |
| A0A067GGS0_CITSI | 3.8e-110 | 57.80 | Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004938mg PE=4 SV=1 | [more] |
| A0A067L6S3_JATCU | 9.3e-109 | 57.51 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02188 PE=4 SV=1 | [more] |
