Cucsa.254370 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.254370
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPentatricopeptide repeat-containing-like protein
Locationscaffold02229 : 2699729 .. 2701604 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGCTGAGGGTCTGAGTTTGGATAGGTTCTGCTTCCCTCCGCTGTTGAAAGCGGCTTCGAGGAATCTTTCCTTGAGAACGGGGATGGAGATTCATGGACTCGCGTCAAAGTTGGGATTCGGGTCAGACCCATTTGTGGAGACGGGGTTGGTTAGAATGTATGCAGCCAGTGGACGGATAATGGAAGCTGGGTTTGTGTTTGATAAAATGTCTCATAAGGATGTCGTTACTACTGATTGATAATTTGGGTAAATTTTACTTTGTTGGTTTTTCGCGGAAAATTTGTTTGAGACTTTCAATTTACTAGCTTTCTTAAGTTGAAGAGTTGTAAACTAAGAAGCATAAATACAGATACGACAAGACACACAATAGTTTAGAAATTTAGGACACCATAAGACAAGGACAGGTAATAAAATATACATTTTTtAAAATATATTTtATTTTTATACGAAAAGAAAATTTAGAGTAAATTGTTCAGTACATTAAAAAAATTTGTCAGAAACTATTTTATACTCAAAAGTTATTATTAGTCATATATATATATATTATCTTAGTCTACTCAACTCAACTAGTATTCTATGCATGTCTAACGTATTTATTGATTAACAAGTGCTTGATACATGTCGAACATTTGTTGAAGTATCAAACACCAATACAATAGCTAAACTAAAGGGCATGTGCTTCTTAGGTTGTAAATCTGGTATGAACTATTCTAATGATAATATTTTTCTAGTTTAAATCCACGTTTAAAGGAAAAATTACTGCGAAACTTATATTTGGTCCTTGCCTTACATATAAAGGTATTGCTTAAGTGGTTGTTATGATCTCGCCTTTCAACTCTTTGAAGAAATGAAGAGAACAAGCTTGGAACTAGATGAAATGATTCTTTCTACCGTTCTTTCTGTGTGCGCTCGTGCTGAAACTTTGGATTTTGGAACAAAAATACACTGAGTCATTGCTAAGAAGAATTTTGTCATGGATCCTCGCTTACGAAGTGCTCTCATCACGATGTATGCAAGCTGTGGCGCCATGGACTTGGCTTGGGATTTGTATGAAAAGATTTCCCCTAAATACATGGTTGTCTTGACTGCCATGGTTTCTGGGCTTGCAAAAGGTGGAAAAATTGGAGATGCTCGCAATGTCTTTGATCAAATGGTGGAGGACTTGATATGTTGGAGTGCAATGATTTCTGGATAGACTGTGAGTGACTATCCTCAAGAGGCTTGTATTATTCAAGAAAATAGCAACAACTAGAAATGAAACCTGATGTAGTCACCATGCTTTAGATCAACAACTAGAAATGTCATTTCAGATTGTGCTCATCTTGGCGCTTTAGATCAAGCCAAATGGATACAAAATTATGTTGATAAAAATGGGTTTGGCAAGGCATTATCTGTCAATAATGCACTCATTGATATGTATGTCAAATGCGGGAGTCCAGAAGGAGGAAGAGAAGTTTTTGGAAAGACGCCAAAGAAAAATGCAATATCTTGGACAATTATGATTAATGCTCTTGAATGCATGGAGATGTTCACAGTGCTTTAAGCCTATTTCATCAAATAAAAGTTGAAAATGTGGAGCCTAATTGGATCACATTTGTAGGGTTGCTTTATGCTTGTAGCCATGGAGGTCTAGTTGAGGAAGGCCGAAGAATATTTCATTCATTGACCAATGAGTATGGTATAAGTCCCAAGCATGAGCACTTTGGTTGAATGGTTGACATGACCTGTTTTGCCGTGCAAATCTTCTCAGTGAAGCTCTTGAGATGATTGAGGCAATGCCCTTTGCTCCTAATGCTATCATTTGGGGGTCCCTTATGGCTGCTTGTCATGTCCATGGTGAGACTGAGTTAGGAGAATTTGCTGCTAAGTAA

mRNA sequence

ATGAGGGCTGAGGGTCTGAGTTTGGATAGGTTCTGCTTCCCTCCGCTGTTGAAAGCGGCTTCGAGGAATCTTTCCTTGAGAACGGGGATGGAGATTCATGGACTCGCGTCAAAGTTGGGATTCGGGTCAGACCCATTTGTGGAGACGGGGTTGGTTAGAATGTATGCAGCCAGTGGACGGATAATGGAAGCTGGGTTTGTGTTTGATAAAATGTCTCATAAGGATGTCAATTTTGTCATGGATCCTCGCTTACGAAGTGCTCTCATCACGATGTATGCAAGCTGTGGCGCCATGGACTTGGCTTGGGATTTGTATGAAAAGATTTCCCCTAAATACATGGTTGTCTTGACTGCCATGGTTTCTGGGCTTGCAAAAGGTGGAAAAATTGGAGATGCTCGCAATGTCTTTGATCAAATGCCTAATTGGATCACATTTGTAGGGTTGCTTTATGCTTGTAGCCATGGAGGTCTAGTTGAGGAAGGCCGAAGAATATTTCATTCATTGACCAATGAGTATGGTATAAGTCCCAAGCATGAGCACTTTGCTCTTGAGATGATTGAGGCAATGCCCTTTGCTCCTAATGCTATCATTTGGGGGTCCCTTATGGCTGCTTGTCATGTCCATGGTGAGACTGAGTTAGGAGAATTTGCTGCTAAGTAA

Coding sequence (CDS)

ATGAGGGCTGAGGGTCTGAGTTTGGATAGGTTCTGCTTCCCTCCGCTGTTGAAAGCGGCTTCGAGGAATCTTTCCTTGAGAACGGGGATGGAGATTCATGGACTCGCGTCAAAGTTGGGATTCGGGTCAGACCCATTTGTGGAGACGGGGTTGGTTAGAATGTATGCAGCCAGTGGACGGATAATGGAAGCTGGGTTTGTGTTTGATAAAATGTCTCATAAGGATGTCAATTTTGTCATGGATCCTCGCTTACGAAGTGCTCTCATCACGATGTATGCAAGCTGTGGCGCCATGGACTTGGCTTGGGATTTGTATGAAAAGATTTCCCCTAAATACATGGTTGTCTTGACTGCCATGGTTTCTGGGCTTGCAAAAGGTGGAAAAATTGGAGATGCTCGCAATGTCTTTGATCAAATGCCTAATTGGATCACATTTGTAGGGTTGCTTTATGCTTGTAGCCATGGAGGTCTAGTTGAGGAAGGCCGAAGAATATTTCATTCATTGACCAATGAGTATGGTATAAGTCCCAAGCATGAGCACTTTGCTCTTGAGATGATTGAGGCAATGCCCTTTGCTCCTAATGCTATCATTTGGGGGTCCCTTATGGCTGCTTGTCATGTCCATGGTGAGACTGAGTTAGGAGAATTTGCTGCTAAGTAA

Protein sequence

MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGRIMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMPNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHFALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK*
Homology
[Close]
BLAST of Cucsa.254370 vs. Swiss-Prot
Match: PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-35
Identity = 75/157 (47.77%), Postives = 106/157 (67.52%), Query Frame = 1 

Query: 84  LRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM---- 143
           + +ALI MYA CG +D   D++EK+  + +V  ++M++ L+  G+  DA ++F +M    
Sbjct: 381 INNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQEN 440

Query: 144 --PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF---------------A 203
             PN +TFVG+LY CSH GLVEEG++IF S+T+EY I+PK EH+               A
Sbjct: 441 VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREA 500

Query: 204 LEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
           LE+IE+MP A N +IWGSLM+AC +HGE ELG+FAAK
Sbjct: 501 LEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAK 537


HSP 2 Score: 85.5 bits (210), Expect = 7.9e-16
Identity = 53/141 (37.59%), Postives = 81/141 (57.45%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           +R  G  LD+F F P+LKA S+  +L  GME+HG+A K+    DPFVETG + MYA+ GR
Sbjct: 102 IRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGR 161

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYM----VVL 120
           I  A  VFD+MSH+DV         + +I  Y   G +D A+ L+E++    +    ++L
Sbjct: 162 INYARNVFDEMSHRDV------VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMIL 221

Query: 121 TAMVSGLAKGGKIGDARNVFD 138
             +VS   + G +   R +++
Sbjct: 222 CNIVSACGRTGNMRYNRAIYE 236


HSP 3 Score: 65.9 bits (159), Expect = 6.5e-10
Identity = 41/135 (30.37%), Postives = 70/135 (51.85%), Query Frame = 1 

Query: 44  DPFVETGLVRMYAASGRIMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWD 103
           D  +   +V     +G +     +++ +   DV   MD  L +AL+TMYA  G MD+A +
Sbjct: 211 DEMILCNIVSACGRTGNMRYNRAIYEFLIENDVR--MDTHLLTALVTMYAGAGCMDMARE 270

Query: 104 LYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQ--MPNWITFVGLLYACSHGGLVEEG 163
            + K+S + + V TAMVSG +K G++ DA+ +FDQ    + + +  ++ A       +E 
Sbjct: 271 FFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEA 330

Query: 164 RRIFHSLTNEYGISP 177
            R+F  +    GI P
Sbjct: 331 LRVFEEMCCS-GIKP 342


HSP 4 Score: 47.4 bits (111), Expect = 2.4e-04
Identity = 35/162 (21.60%), Postives = 75/162 (46.30%), Query Frame = 1 

Query: 13  FPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGRIMEAGFVFDKMS 72
           F P L+  SR+   R  +  +     +G   D F    +++  +    + E G     ++
Sbjct: 79  FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFE-GMELHGVA 138

Query: 73  HKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDA 132
            K +  + DP + +  + MYASCG ++ A ++++++S + +V    M+    + G + +A
Sbjct: 139 FK-IATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 198

Query: 133 RNVFDQ------MPNWITFVGLLYACSHGGLVEEGRRIFHSL 169
             +F++      MP+ +    ++ AC   G +   R I+  L
Sbjct: 199 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL 238

[Close]
BLAST of Cucsa.254370 vs. Swiss-Prot
Match: PP316_ARATH (Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3)

HSP 1 Score: 116.3 bits (290), Expect = 4.2e-25
Identity = 60/155 (38.71%), Postives = 89/155 (57.42%), Query Frame = 1 

Query: 86  SALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM------ 145
           ++LI+MY  CG +  AW L+E +  K +V   AM+SG A+ G    A  +F +M      
Sbjct: 323 TSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIR 382

Query: 146 PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF---------------ALE 205
           P+WITFV +L AC+H GLV  G   F S+  +Y + P+ +H+               AL+
Sbjct: 383 PDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALK 442

Query: 206 MIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
           +I +MPF P+A ++G+L+ AC VH   EL EFAA+
Sbjct: 443 LIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAE 477


HSP 2 Score: 103.2 bits (256), Expect = 3.7e-21
Identity = 70/234 (29.91%), Postives = 107/234 (45.73%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           M  EG+  +       L   S   +L+ G +IH + SK    +D    T L+ MY   G 
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGE 334

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMV 120
           + +A  +F+ M  KDV         +A+I+ YA  G  D A  L+ ++    +       
Sbjct: 335 LGDAWKLFEVMKKKDV------VAWNAMISGYAQHGNADKALCLFREMIDNKI------- 394

Query: 121 SGLAKGGKIGDARNVFDQMPNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEH 180
                              P+WITFV +L AC+H GLV  G   F S+  +Y + P+ +H
Sbjct: 395 ------------------RPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDH 454

Query: 181 F---------------ALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
           +               AL++I +MPF P+A ++G+L+ AC VH   EL EFAA+
Sbjct: 455 YTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAE 477


HSP 3 Score: 36.2 bits (82), Expect = 5.5e-01
Identity = 31/111 (27.93%), Postives = 48/111 (43.24%), Query Frame = 1 

Query: 30  MEIHGLASKLGFGSDPFVETGLVRMYAASGRIMEAGFVFDKMSHKDVNFVMDPRLRSALI 89
           ME H L  ++    D F    ++  Y  +    +A   FD+M  KD          + +I
Sbjct: 110 MEAHQLFDEIP-EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDA------ASWNTMI 169

Query: 90  TMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMP 141
           T YA  G M+ A +L+  +  K  V   AM+SG  + G +  A + F   P
Sbjct: 170 TGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAP 213

[Close]
BLAST of Cucsa.254370 vs. Swiss-Prot
Match: PP121_ARATH (Pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.2e-25
Identity = 72/226 (31.86%), Postives = 115/226 (50.88%), Query Frame = 1 

Query: 25  SLRTGMEIHGLASK----------LGFGSDPFVETGLVRMYAASGRIMEAGFVFDKMSHK 84
           SL +G   HGL              GF  D F  + +++  A S        V   ++  
Sbjct: 622 SLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITK- 681

Query: 85  DVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARN 144
            +    +P + S+L+TMY+  G++D     + +I+   ++  TA+++  A+ GK  +A  
Sbjct: 682 -IGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQ 741

Query: 145 VFDQM------PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF------- 204
           V++ M      P+ +TFVG+L ACSHGGLVEE     +S+  +YGI P++ H+       
Sbjct: 742 VYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDAL 801

Query: 205 --------ALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
                   A   I  M   P+A++WG+L+AAC +HGE ELG+ AAK
Sbjct: 802 GRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAK 845


HSP 2 Score: 39.3 bits (90), Expect = 6.5e-02
Identity = 19/56 (33.93%), Postives = 34/56 (60.71%), Query Frame = 1 

Query: 84  LRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM 140
           L SAL+ MY+ CG++ LA  +Y+++     V  ++++SG ++ G I D   +F  M
Sbjct: 588 LGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDM 643


HSP 3 Score: 33.9 bits (76), Expect = 2.7e+00
Identity = 17/63 (26.98%), Postives = 36/63 (57.14%), Query Frame = 1 

Query: 78  FVMDPRLRSALITMYASCGAMDLAWDLYEKISP-KYMVVLTAMVSGLAKGGKIGDARNVF 137
           F +D  + +ALI+MY+  G +DL+  ++E +   +   ++  M++  ++  K G A  +F
Sbjct: 382 FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLF 441

Query: 138 DQM 140
            +M
Sbjct: 442 TRM 444

[Close]
BLAST of Cucsa.254370 vs. Swiss-Prot
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 2.1e-24
Identity = 63/154 (40.91%), Postives = 92/154 (59.74%), Query Frame = 1 

Query: 86  SALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM------ 145
           +ALI+MYA CG++  A   + ++S K  V   A+++  +K G   +A + FDQM      
Sbjct: 731 NALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVR 790

Query: 146 PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF---------------ALE 205
           PN +T VG+L ACSH GLV++G   F S+ +EYG+SPK EH+               A E
Sbjct: 791 PNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKE 850

Query: 206 MIEAMPFAPNAIIWGSLMAACHVHGETELGEFAA 219
            I+ MP  P+A++W +L++AC VH   E+GEFAA
Sbjct: 851 FIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAA 884


HSP 2 Score: 42.0 bits (97), Expect = 1.0e-02
Identity = 27/94 (28.72%), Postives = 46/94 (48.94%), Query Frame = 1 

Query: 77  NFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVF 136
           NF ++  + S LI MYA  G +D AWD+  + + K +V  T M++G  +      A   F
Sbjct: 520 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 579

Query: 137 DQM------PNWITFVGLLYACSHGGLVEEGRRI 165
            QM       + +     + AC+    ++EG++I
Sbjct: 580 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613


HSP 3 Score: 37.0 bits (84), Expect = 3.2e-01
Identity = 21/64 (32.81%), Postives = 32/64 (50.00%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           M  +GL  D      L+ A S + +L  G ++H   +KLGF S+  +E  L+ +YA    
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439

Query: 61  IMEA 65
           I  A
Sbjct: 440 IETA 443

[Close]
BLAST of Cucsa.254370 vs. Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.6e-24
Identity = 71/240 (29.58%), Postives = 113/240 (47.08%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           ++ E +    + F  +LKA +    L  GM+ H                           
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHV-------------------------H 436

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMV 120
           +++ GF F      D+ FV      ++LI MY  CG ++  + ++ K+  +  V   AM+
Sbjct: 437 VLKHGFKFQSGEEDDI-FV-----GNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 496

Query: 121 SGLAKGGKIGDARNVFDQM------PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGI 180
            G A+ G   +A  +F +M      P+ IT +G+L AC H G VEEGR  F S+T ++G+
Sbjct: 497 IGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGV 556

Query: 181 SPKHEHF---------------ALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
           +P  +H+               A  MIE MP  P+++IWGSL+AAC VH    LG++ A+
Sbjct: 557 APLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAE 585


HSP 2 Score: 58.5 bits (140), Expect = 1.0e-07
Identity = 61/236 (25.85%), Postives = 102/236 (43.22%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           M  EG  L+ + F  +L A S    +  G+++H L +K  F SD ++ + LV MY+  G 
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYE-----KISPKYMVV 120
           + +A  VFD+M  ++V         ++LIT +   G    A D+++     ++ P   V 
Sbjct: 203 VNDAQRVFDEMGDRNV------VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPD-EVT 262

Query: 121 LTAMVSGLAKGGKIGDARNVF------DQMPNWI----TFVGLLYACSHGGLVEEGRRIF 180
           L +++S  A    I   + V       D++ N I     FV +   CS    ++E R IF
Sbjct: 263 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR---IKEARFIF 322

Query: 181 HSLTNEYGISPKHEHFALEMIEAMPFA---------PNAIIWGSLMAACHVHGETE 213
            S+     I+         M  +   A          N + W +L+A    +GE E
Sbjct: 323 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENE 368


HSP 3 Score: 52.8 bits (125), Expect = 5.7e-06
Identity = 37/152 (24.34%), Postives = 71/152 (46.71%), Query Frame = 1 

Query: 9   DRFCFPPLLKAASRNLSLRTGMEIHGLASKLG-FGSDPFVETGLVRMYAASGRIMEAGFV 68
           D      ++ A +   +++ G E+HG   K     +D  +    V MYA   RI EA F+
Sbjct: 252 DEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFI 311

Query: 69  FDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGG 128
           FD M  ++V         +++I+ YA   +   A  ++ K++ + +V   A+++G  + G
Sbjct: 312 FDSMPIRNV------IAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 371

Query: 129 KIGDARNVF------DQMPNWITFVGLLYACS 154
           +  +A ++F         P   +F  +L AC+
Sbjct: 372 ENEEALSLFCLLKRESVCPTHYSFANILKACA 397


HSP 4 Score: 36.2 bits (82), Expect = 5.5e-01
Identity = 15/57 (26.32%), Postives = 35/57 (61.40%), Query Frame = 1 

Query: 84  LRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMP 141
           +++ LI  Y+ CG+++    +++K+  + +    ++V+GL K G + +A ++F  MP
Sbjct: 57  IQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP 113

[Close]
BLAST of Cucsa.254370 vs. TrEMBL
Match: D7T700_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03630 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.5e-37
Identity = 92/232 (39.66%), Postives = 129/232 (55.60%), Query Frame = 1 

Query: 9   DRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGRIMEAGFVF 68
           D  C+  ++   + + S +  + +      LG   D      ++   A  G + +A ++ 
Sbjct: 319 DLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIH 378

Query: 69  DKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGK 128
             +        +   + +ALI MYA CG+++ A  +++K+  K ++  T M+S  A  G 
Sbjct: 379 LFVDKNGFGGALP--INNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGD 438

Query: 129 IGDARNVFDQM------PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF- 188
            G A   F QM      PN ITFVG+LYACSH GLVEEGR+IF+S+ NE+ I+PKH H+ 
Sbjct: 439 AGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYG 498

Query: 189 --------------ALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
                         ALE++EAMP APN IIWGSLMAAC VHGE ELGEFAAK
Sbjct: 499 CMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAK 548

[Close]
BLAST of Cucsa.254370 vs. TrEMBL
Match: D7T700_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03630 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.0e-23
Identity = 68/142 (47.89%), Postives = 89/142 (62.68%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           MR +GL++DRF FPPLLKA SR  SL  G+EIHGLA+KLGF SDPFV+TGLVRMYAA GR
Sbjct: 113 MRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGR 172

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEK-----ISPKYMVV 120
           I EA  +FDKM H+DV         S +I  Y   G  + A  L+E+     + P  M +
Sbjct: 173 IAEARLMFDKMFHRDV------VTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEM-M 232

Query: 121 LTAMVSGLAKGGKIGDARNVFD 138
           L+ ++S   + G +   + + D
Sbjct: 233 LSTVLSACGRAGNLSYGKMIHD 247


HSP 2 Score: 85.1 bits (209), Expect = 1.2e-13
Identity = 52/134 (38.81%), Postives = 81/134 (60.45%), Query Frame = 1 

Query: 48  ETGLVRMYAASGRIMEAGFVFDKMSHKDV---NFVMDPRLRSALITMYASCGAMDLAWDL 107
           E  L  + +A GR       + KM H  +   N V+DP L+SAL+TMYASCG+MDLA +L
Sbjct: 223 EMMLSTVLSACGRA--GNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNL 282

Query: 108 YEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM--PNWITFVGLLYACSHGGLVEEGR 167
           +EK++PK +V  TAMV+G +K G+I +AR+VF+QM   + + +  ++   +     +E  
Sbjct: 283 FEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEAL 342

Query: 168 RIFHSLTNEYGISP 177
            +F+ +    GI P
Sbjct: 343 NLFNEM-QSLGIKP 353


HSP 3 Score: 72.0 bits (175), Expect = 1.0e-09
Identity = 59/230 (25.65%), Postives = 111/230 (48.26%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           M+   +  D      +L A  R  +L  G  IH    +     DP +++ LV MYA+ G 
Sbjct: 214 MKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGS 273

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMV 120
           +  A  +F+KM+ K  N V      +A++T Y+  G ++ A  ++ ++  K +V  +AM+
Sbjct: 274 MDLALNLFEKMTPK--NLVAS----TAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMI 333

Query: 121 SGLAKGGKIGDARNVFDQM------PNWITFVGLLYACSHGGLVEEGRRIFHSL-TNEYG 180
           SG A+     +A N+F++M      P+ +T + ++ AC+H G +++ + I   +  N +G
Sbjct: 334 SGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFG 393

Query: 181 ISPKHEHFALEM-------------IEAMPFAPNAIIWGSLMAACHVHGE 211
            +    +  +EM              + MP   N I W  +++A  +HG+
Sbjct: 394 GALPINNALIEMYAKCGSLERARRIFDKMP-RKNVISWTCMISAFAMHGD 436


HSP 4 Score: 47.8 bits (112), Expect = 2.0e-02
Identity = 29/114 (25.44%), Postives = 55/114 (48.25%), Query Frame = 1 

Query: 76  VNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNV 135
           + F  DP +++ L+ MYA+CG +  A  +++K+  + +V  + M+ G  + G   DA  +
Sbjct: 151 LGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLL 210

Query: 136 FDQMPNW------ITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHFAL 184
           F++M N+      +    +L AC   G +  G+ I   +     +   H   AL
Sbjct: 211 FEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSAL 264


HSP 5 Score: 157.9 bits (398), Expect = 1.4e-35
Identity = 76/158 (48.10%), Postives = 107/158 (67.72%), Query Frame = 1 

Query: 83  RLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM--- 142
           R+ +ALI MYA CG+++ A +++EK++ + ++  T M++  A  G   +A   F +M   
Sbjct: 385 RINNALIDMYAKCGSLERARNVFEKMTSRNVISWTGMINAFAIHGDANNALRYFQKMKEA 444

Query: 143 ---PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF--------------- 202
              PN +TFVG+LYACSH GLVE+GR+IF S+ NE+ I+PKHEH+               
Sbjct: 445 RVEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCMVDLLGRANLLRE 504

Query: 203 ALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
           A+E++E MPFAPN +IWGSLM+AC +HGETELGEF AK
Sbjct: 505 AVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAK 542

[Close]
BLAST of Cucsa.254370 vs. TrEMBL
Match: A0A0B0NLW2_GOSAR (Pentatricopeptide repeat-containing-like protein OS=Gossypium arboreum GN=F383_05089 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.1e-30
Identity = 86/230 (37.39%), Postives = 120/230 (52.17%), Query Frame = 1 

Query: 5   GLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGRIMEA 64
           G+  D+     ++ A +    L     IH  A K GFG    +   L+ MYA  G +  A
Sbjct: 344 GIRPDQVTMLSVISACANLGVLDKAKWIHVYADKNGFGGSLRINNALIDMYAKCGSLERA 403

Query: 65  GFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLA 124
             VF+KM+ ++V         + +I  +A  G  + A   ++K+                
Sbjct: 404 RNVFEKMTSRNV------ISWTGMINAFAIHGDANNALRYFQKMK--------------- 463

Query: 125 KGGKIGDARNVFDQMPNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF--- 184
                 +AR      PN +TFVG+LYACSH GLVE+GR+IF S+ NE+ I+PKHEH+   
Sbjct: 464 ------EAR----VEPNGVTFVGVLYACSHAGLVEDGRKIFASMINEHNITPKHEHYGCM 523

Query: 185 ------------ALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
                       A+E++E MPFAPN +IWGSLM+AC +HGETELGEF AK
Sbjct: 524 VDLLGRANLLREAVEIVETMPFAPNVVIWGSLMSACQIHGETELGEFTAK 542


HSP 2 Score: 97.8 bits (242), Expect = 1.7e-17
Identity = 58/141 (41.13%), Postives = 80/141 (56.74%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           +R EG+ +DRF FPPLLKAASR   L  G EIHG   K GF SDPFV+TGL+ MY   GR
Sbjct: 107 LRNEGIPIDRFAFPPLLKAASRVGWLAEGKEIHGFGFKSGFHSDPFVQTGLMVMYVGCGR 166

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYM----VVL 120
           + EA  VFDKMS++D+           +I  Y      D A +L+E++    +     VL
Sbjct: 167 LPEARLVFDKMSYRDI------VAWRIMIDGYCQSELFDDALELFEEMKRANIEADKFVL 226

Query: 121 TAMVSGLAKGGKIGDARNVFD 138
           + ++S  A+ G +   + + D
Sbjct: 227 SGILSACARAGNLDCGKAIHD 241


HSP 3 Score: 87.8 bits (216), Expect = 1.8e-14
Identity = 49/141 (34.75%), Postives = 83/141 (58.87%), Query Frame = 1 

Query: 30  MEIHGLASKLGFGSDPFVETGLVRMYAASGRIMEAGFVFDKMSHKDVNFVMDPRLRSALI 89
           +E+     +    +D FV +G++   A +G +     + D +  K++  V+D  LR AL+
Sbjct: 202 LELFEEMKRANIEADKFVLSGILSACARAGNLDCGKAIHDYIIQKEL--VIDAHLRCALV 261

Query: 90  TMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM--PNWITFVG 149
           TMYASCG MD+A  LY+++ PK +VV TAMVSG ++ G++ DAR +FDQM   + +++  
Sbjct: 262 TMYASCGCMDMAQQLYDQMKPKNVVVSTAMVSGYSRHGRVKDARLIFDQMVEKDLVSWSA 321

Query: 150 LLYACSHGGLVEEGRRIFHSL 169
           ++   +     +E  R+F  L
Sbjct: 322 MISGYAESDQPQEALRLFKEL 340


HSP 4 Score: 35.0 bits (79), Expect = 1.4e+02
Identity = 43/168 (25.60%), Postives = 73/168 (43.45%), Query Frame = 1 

Query: 47  VETGLVRMYAASGRIMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYE 106
           V T +V  Y+  GR+ +A  +FD+M  KD+         SA+I+ YA       A  L++
Sbjct: 285 VSTAMVSGYSRHGRVKDARLIFDQMVEKDL------VSWSAMISGYAESDQPQEALRLFK 344

Query: 107 KIS----PKYMVVLTAMVSGLAKGGKIGDARNVFDQMPNWITFVGLLYACSHGGLVEEGR 166
           ++         V + +++S  A  G +  A+        WI     +YA  +G       
Sbjct: 345 ELQILGIRPDQVTMLSVISACANLGVLDKAK--------WIH----VYADKNG--FGGSL 404

Query: 167 RIFHSLTNEYGISPKHEHFALEMIEAMPFAPNAIIWGSLMAACHVHGE 211
           RI ++L + Y      E  A  + E M  + N I W  ++ A  +HG+
Sbjct: 405 RINNALIDMYAKCGSLER-ARNVFEKMT-SRNVISWTGMINAFAIHGD 430


HSP 5 Score: 157.1 bits (396), Expect = 2.4e-35
Identity = 80/155 (51.61%), Postives = 105/155 (67.74%), Query Frame = 1 

Query: 86  SALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM------ 145
           +AL+ MYA CG+++ A +++EK+  K ++  T+M++  A  G   +A ++F +M      
Sbjct: 395 NALVDMYAKCGSLERAREVFEKMQRKNVISWTSMINACAMHGDAVNALSLFHRMKDKNVE 454

Query: 146 PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF---------------ALE 205
           PN +TFVG+LYACSH GLVEEGR IF S+ NEY I+PKHEH+               ALE
Sbjct: 455 PNSVTFVGVLYACSHTGLVEEGRNIFASMINEYNIAPKHEHYGCMVDLFGRANLLREALE 514

Query: 206 MIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
           +IE MP APN IIWGSLMAAC +HGE ELGEFAAK
Sbjct: 515 VIETMPVAPNVIIWGSLMAACRIHGENELGEFAAK 549

[Close]
BLAST of Cucsa.254370 vs. TrEMBL
Match: W9R134_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005425 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-30
Identity = 92/234 (39.32%), Postives = 118/234 (50.43%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           M+  G+  D+     ++ A +   +L     +H  A + GFG    V   LV MYA  G 
Sbjct: 347 MQLLGIRPDQITMLSVISACAHLGALDKANWMHIYADRNGFGGALPVSNALVDMYAKCGS 406

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMV 120
           +  A  VF+KM  K+V         +++I   A  G    A  L+ ++  K         
Sbjct: 407 LERAREVFEKMQRKNV------ISWTSMINACAMHGDAVNALSLFHRMKDK--------- 466

Query: 121 SGLAKGGKIGDARNVFDQMPNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEH 180
                           +  PN +TFVG+LYACSH GLVEEGR IF S+ NEY I+PKHEH
Sbjct: 467 ----------------NVEPNSVTFVGVLYACSHTGLVEEGRNIFASMINEYNIAPKHEH 526

Query: 181 F---------------ALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
           +               ALE+IE MP APN IIWGSLMAAC +HGE ELGEFAAK
Sbjct: 527 YGCMVDLFGRANLLREALEVIETMPVAPNVIIWGSLMAACRIHGENELGEFAAK 549


HSP 2 Score: 109.0 bits (271), Expect = 7.5e-21
Identity = 61/142 (42.96%), Postives = 86/142 (60.56%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           MR EG S+DR+ FP +LKAA +  +L  G EIHGLA+K+GF SDPFV+TGLVRMYA  GR
Sbjct: 114 MRREGSSVDRYSFPAVLKAAGKTQALEEGREIHGLATKMGFDSDPFVQTGLVRMYAGCGR 173

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEK-----ISPKYMVV 120
           I++   VFDKMS +DV         S +I  Y+     D  ++LYE+     + P  M +
Sbjct: 174 ILDGRLVFDKMSQRDV------VAWSIMIDGYSQSRLFDNVFNLYEEMRNSGVEPDEM-I 233

Query: 121 LTAMVSGLAKGGKIGDARNVFD 138
           L+ ++S   + G +   + + D
Sbjct: 234 LSTILSACGRAGNLSCGKAIHD 248


HSP 3 Score: 79.7 bits (195), Expect = 4.8e-12
Identity = 39/94 (41.49%), Postives = 65/94 (69.15%), Query Frame = 1 

Query: 77  NFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVF 136
           + + D RLRSAL+ MYASCG+MD+A +L++K+S K +VV TAM+SG +K G++ DAR +F
Sbjct: 254 SLLADSRLRSALVAMYASCGSMDIAQELFDKMSSKNLVVSTAMISGYSKLGRLQDARLIF 313

Query: 137 DQM--PNWITFVGLLYACSHGGLVEEGRRIFHSL 169
           DQM   + +++  ++   +     +E  R+F+ +
Sbjct: 314 DQMVEKDLVSWSAMIAGYAESDWPQEALRLFNDM 347


HSP 4 Score: 156.4 bits (394), Expect = 4.1e-35
Identity = 86/202 (42.57%), Postives = 123/202 (60.89%), Query Frame = 1 

Query: 39  LGFGSDPFVETGLVRMYAASGRIMEAGFVFDKMSHKDVN-FVMDPRLRSALITMYASCGA 98
           LG G D      ++   A  G + +A +   K  + D N F    R+ +ALI MYA CG+
Sbjct: 343 LGIGPDQVTMLSVISACANLGVLDKAKW---KHVYADKNGFGGSLRINNALIDMYAKCGS 402

Query: 99  MDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM------PNWITFVGLLYA 158
           ++ A +++EK++ + ++  T+M++  A  G   +A   F +M      PN +TFVG+LYA
Sbjct: 403 LERARNVFEKMTSRNVISWTSMINAFAIHGDANNALRYFQKMKEACVEPNGVTFVGVLYA 462

Query: 159 CSHGGLVEEGRRIFHSLTNEYGISPKHEHF---------------ALEMIEAMPFAPNAI 218
           CSH GLVEEGR+IF S+ NE+ I+PKHEH+               A+E++E MPFA N +
Sbjct: 463 CSHAGLVEEGRKIFASMINEHNITPKHEHYGCMVDLFGRANLLREAVEIVETMPFASNVV 522

[Close]
BLAST of Cucsa.254370 vs. TrEMBL
Match: A0A0D2T7B3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G264200 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.8e-17
Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           +R EG+ +DRF FPPLLKAASR   L  G EIHG   K GF SDPFV+TGL+ MY   GR
Sbjct: 107 LRNEGIPIDRFAFPPLLKAASRVGWLAEGKEIHGFGFKSGFHSDPFVQTGLMVMYVGCGR 166

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYM----VVL 120
           + EA  VFDKMS++D+           +I  Y      D A +L+E++    +     VL
Sbjct: 167 LTEARLVFDKMSYRDI------VAWRVMIDGYCQNELFDDALELFEEMKRANIEADKFVL 226

Query: 121 TAMVSGLAKGGKIGDARNVFD 138
           ++++S   + G +   + + D
Sbjct: 227 SSILSACGRAGNLDCGKAIHD 241


HSP 2 Score: 84.3 bits (207), Expect = 2.0e-13
Identity = 50/149 (33.56%), Postives = 85/149 (57.05%), Query Frame = 1 

Query: 30  MEIHGLASKLGFGSDPFVETGLVRMYAASGRIMEAGFVFDKMSHKDVNFVMDPRLRSALI 89
           +E+     +    +D FV + ++     +G +     + D +  K++  V+D  LR AL+
Sbjct: 202 LELFEEMKRANIEADKFVLSSILSACGRAGNLDCGKAIHDYIIQKEL--VIDAHLRCALV 261

Query: 90  TMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM--PNWITFVG 149
           TMYASCG MD+A  LY+++ PK +VV TAMVSG ++ G++ DAR +FDQM   + +++  
Sbjct: 262 TMYASCGCMDMAQQLYDQMIPKNVVVSTAMVSGYSRHGRVKDARLIFDQMVEKDLVSWSA 321

Query: 150 LLYACSHGGLVEEGRRIFHSLTNEYGISP 177
           ++   +     +E  R+F+ L    GI P
Sbjct: 322 MISGYAESDQPQEALRLFNEL-EILGIGP 347


HSP 3 Score: 35.8 bits (81), Expect = 8.0e+01
Identity = 40/179 (22.35%), Postives = 75/179 (41.90%), Query Frame = 1 

Query: 47  VETGLVRMYAASGRIMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYE 106
           V T +V  Y+  GR+ +A  +FD+M  KD+         SA+I+ YA       A  L+ 
Sbjct: 285 VSTAMVSGYSRHGRVKDARLIFDQMVEKDL------VSWSAMISGYAESDQPQEALRLFN 344

Query: 107 KISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMPNWITFVGLLYACSHGGLVEEGR---- 166
           ++           + G+                P+ +T + ++ AC++ G++++ +    
Sbjct: 345 ELE----------ILGIG---------------PDQVTMLSVISACANLGVLDKAKWKHV 404

Query: 167 -----------RIFHSLTNEYGISPKHEHFALEMIEAMPFAPNAIIWGSLMAACHVHGE 211
                      RI ++L + Y      E  A  + E M  + N I W S++ A  +HG+
Sbjct: 405 YADKNGFGGSLRINNALIDMYAKCGSLER-ARNVFEKMT-SRNVISWTSMINAFAIHGD 430


HSP 4 Score: 156.0 bits (393), Expect = 5.3e-35
Identity = 79/157 (50.32%), Postives = 102/157 (64.97%), Query Frame = 1 

Query: 84  LRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM---- 143
           + +ALI MYA CG +  A  ++EK+  + ++  T+M++  A  G   +A   F QM    
Sbjct: 386 VNNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDEN 445

Query: 144 --PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF---------------A 203
             PN +TFVG+LYACSH GLVEEGRR F S+TNE+ I+PKHEH+               A
Sbjct: 446 IKPNGVTFVGVLYACSHAGLVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDA 505

Query: 204 LEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
           LE++E MP APN +IWGSLMAAC +HGE ELGEFAAK
Sbjct: 506 LELVETMPLAPNVVIWGSLMAACQIHGENELGEFAAK 542

[Close]
BLAST of Cucsa.254370 vs. TAIR10
Match: AT4G14820.1 (AT4G14820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-36
Identity = 75/157 (47.77%), Postives = 106/157 (67.52%), Query Frame = 1 

Query: 84  LRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM---- 143
           + +ALI MYA CG +D   D++EK+  + +V  ++M++ L+  G+  DA ++F +M    
Sbjct: 381 INNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQEN 440

Query: 144 --PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF---------------A 203
             PN +TFVG+LY CSH GLVEEG++IF S+T+EY I+PK EH+               A
Sbjct: 441 VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREA 500

Query: 204 LEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
           LE+IE+MP A N +IWGSLM+AC +HGE ELG+FAAK
Sbjct: 501 LEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAK 537


HSP 2 Score: 85.5 bits (210), Expect = 4.5e-17
Identity = 53/141 (37.59%), Postives = 81/141 (57.45%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           +R  G  LD+F F P+LKA S+  +L  GME+HG+A K+    DPFVETG + MYA+ GR
Sbjct: 102 IRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGR 161

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYM----VVL 120
           I  A  VFD+MSH+DV         + +I  Y   G +D A+ L+E++    +    ++L
Sbjct: 162 INYARNVFDEMSHRDV------VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMIL 221

Query: 121 TAMVSGLAKGGKIGDARNVFD 138
             +VS   + G +   R +++
Sbjct: 222 CNIVSACGRTGNMRYNRAIYE 236


HSP 3 Score: 65.9 bits (159), Expect = 3.7e-11
Identity = 41/135 (30.37%), Postives = 70/135 (51.85%), Query Frame = 1 

Query: 44  DPFVETGLVRMYAASGRIMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWD 103
           D  +   +V     +G +     +++ +   DV   MD  L +AL+TMYA  G MD+A +
Sbjct: 211 DEMILCNIVSACGRTGNMRYNRAIYEFLIENDVR--MDTHLLTALVTMYAGAGCMDMARE 270

Query: 104 LYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQ--MPNWITFVGLLYACSHGGLVEEG 163
            + K+S + + V TAMVSG +K G++ DA+ +FDQ    + + +  ++ A       +E 
Sbjct: 271 FFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEA 330

Query: 164 RRIFHSLTNEYGISP 177
            R+F  +    GI P
Sbjct: 331 LRVFEEMCCS-GIKP 342


HSP 4 Score: 47.4 bits (111), Expect = 1.3e-05
Identity = 35/162 (21.60%), Postives = 75/162 (46.30%), Query Frame = 1 

Query: 13  FPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGRIMEAGFVFDKMS 72
           F P L+  SR+   R  +  +     +G   D F    +++  +    + E G     ++
Sbjct: 79  FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFE-GMELHGVA 138

Query: 73  HKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDA 132
            K +  + DP + +  + MYASCG ++ A ++++++S + +V    M+    + G + +A
Sbjct: 139 FK-IATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 198

Query: 133 RNVFDQ------MPNWITFVGLLYACSHGGLVEEGRRIFHSL 169
             +F++      MP+ +    ++ AC   G +   R I+  L
Sbjct: 199 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL 238

[Close]
BLAST of Cucsa.254370 vs. TAIR10
Match: AT4G16835.1 (AT4G16835.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 116.3 bits (290), Expect = 2.4e-26
Identity = 60/155 (38.71%), Postives = 89/155 (57.42%), Query Frame = 1 

Query: 86  SALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM------ 145
           ++LI+MY  CG +  AW L+E +  K +V   AM+SG A+ G    A  +F +M      
Sbjct: 323 TSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIR 382

Query: 146 PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF---------------ALE 205
           P+WITFV +L AC+H GLV  G   F S+  +Y + P+ +H+               AL+
Sbjct: 383 PDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALK 442

Query: 206 MIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
           +I +MPF P+A ++G+L+ AC VH   EL EFAA+
Sbjct: 443 LIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAE 477


HSP 2 Score: 103.2 bits (256), Expect = 2.1e-22
Identity = 70/234 (29.91%), Postives = 107/234 (45.73%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           M  EG+  +       L   S   +L+ G +IH + SK    +D    T L+ MY   G 
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGE 334

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMV 120
           + +A  +F+ M  KDV         +A+I+ YA  G  D A  L+ ++    +       
Sbjct: 335 LGDAWKLFEVMKKKDV------VAWNAMISGYAQHGNADKALCLFREMIDNKI------- 394

Query: 121 SGLAKGGKIGDARNVFDQMPNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEH 180
                              P+WITFV +L AC+H GLV  G   F S+  +Y + P+ +H
Sbjct: 395 ------------------RPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDH 454

Query: 181 F---------------ALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
           +               AL++I +MPF P+A ++G+L+ AC VH   EL EFAA+
Sbjct: 455 YTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAE 477


HSP 3 Score: 36.2 bits (82), Expect = 3.1e-02
Identity = 31/111 (27.93%), Postives = 48/111 (43.24%), Query Frame = 1 

Query: 30  MEIHGLASKLGFGSDPFVETGLVRMYAASGRIMEAGFVFDKMSHKDVNFVMDPRLRSALI 89
           ME H L  ++    D F    ++  Y  +    +A   FD+M  KD          + +I
Sbjct: 110 MEAHQLFDEIP-EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDA------ASWNTMI 169

Query: 90  TMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMP 141
           T YA  G M+ A +L+  +  K  V   AM+SG  + G +  A + F   P
Sbjct: 170 TGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAP 213

[Close]
BLAST of Cucsa.254370 vs. TAIR10
Match: AT1G74600.1 (AT1G74600.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 115.5 bits (288), Expect = 4.0e-26
Identity = 72/226 (31.86%), Postives = 115/226 (50.88%), Query Frame = 1 

Query: 25  SLRTGMEIHGLASK----------LGFGSDPFVETGLVRMYAASGRIMEAGFVFDKMSHK 84
           SL +G   HGL              GF  D F  + +++  A S        V   ++  
Sbjct: 622 SLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITK- 681

Query: 85  DVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARN 144
            +    +P + S+L+TMY+  G++D     + +I+   ++  TA+++  A+ GK  +A  
Sbjct: 682 -IGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQ 741

Query: 145 VFDQM------PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF------- 204
           V++ M      P+ +TFVG+L ACSHGGLVEE     +S+  +YGI P++ H+       
Sbjct: 742 VYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDAL 801

Query: 205 --------ALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
                   A   I  M   P+A++WG+L+AAC +HGE ELG+ AAK
Sbjct: 802 GRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAK 845


HSP 2 Score: 39.3 bits (90), Expect = 3.7e-03
Identity = 19/56 (33.93%), Postives = 34/56 (60.71%), Query Frame = 1 

Query: 84  LRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM 140
           L SAL+ MY+ CG++ LA  +Y+++     V  ++++SG ++ G I D   +F  M
Sbjct: 588 LGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDM 643


HSP 3 Score: 33.9 bits (76), Expect = 1.5e-01
Identity = 17/63 (26.98%), Postives = 36/63 (57.14%), Query Frame = 1 

Query: 78  FVMDPRLRSALITMYASCGAMDLAWDLYEKISP-KYMVVLTAMVSGLAKGGKIGDARNVF 137
           F +D  + +ALI+MY+  G +DL+  ++E +   +   ++  M++  ++  K G A  +F
Sbjct: 382 FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLF 441

Query: 138 DQM 140
            +M
Sbjct: 442 TRM 444

[Close]
BLAST of Cucsa.254370 vs. TAIR10
Match: AT4G13650.1 (AT4G13650.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-25
Identity = 63/154 (40.91%), Postives = 92/154 (59.74%), Query Frame = 1 

Query: 86  SALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM------ 145
           +ALI+MYA CG++  A   + ++S K  V   A+++  +K G   +A + FDQM      
Sbjct: 731 NALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVR 790

Query: 146 PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF---------------ALE 205
           PN +T VG+L ACSH GLV++G   F S+ +EYG+SPK EH+               A E
Sbjct: 791 PNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKE 850

Query: 206 MIEAMPFAPNAIIWGSLMAACHVHGETELGEFAA 219
            I+ MP  P+A++W +L++AC VH   E+GEFAA
Sbjct: 851 FIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAA 884


HSP 2 Score: 42.0 bits (97), Expect = 5.7e-04
Identity = 27/94 (28.72%), Postives = 46/94 (48.94%), Query Frame = 1 

Query: 77  NFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVF 136
           NF ++  + S LI MYA  G +D AWD+  + + K +V  T M++G  +      A   F
Sbjct: 520 NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTF 579

Query: 137 DQM------PNWITFVGLLYACSHGGLVEEGRRI 165
            QM       + +     + AC+    ++EG++I
Sbjct: 580 RQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613


HSP 3 Score: 37.0 bits (84), Expect = 1.8e-02
Identity = 21/64 (32.81%), Postives = 32/64 (50.00%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           M  +GL  D      L+ A S + +L  G ++H   +KLGF S+  +E  L+ +YA    
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439

Query: 61  IMEA 65
           I  A
Sbjct: 440 IETA 443

[Close]
BLAST of Cucsa.254370 vs. TAIR10
Match: AT2G13600.1 (AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 112.8 bits (281), Expect = 2.6e-25
Identity = 71/240 (29.58%), Postives = 113/240 (47.08%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           ++ E +    + F  +LKA +    L  GM+ H                           
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHV-------------------------H 436

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMV 120
           +++ GF F      D+ FV      ++LI MY  CG ++  + ++ K+  +  V   AM+
Sbjct: 437 VLKHGFKFQSGEEDDI-FV-----GNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 496

Query: 121 SGLAKGGKIGDARNVFDQM------PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGI 180
            G A+ G   +A  +F +M      P+ IT +G+L AC H G VEEGR  F S+T ++G+
Sbjct: 497 IGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGV 556

Query: 181 SPKHEHF---------------ALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
           +P  +H+               A  MIE MP  P+++IWGSL+AAC VH    LG++ A+
Sbjct: 557 APLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAE 585


HSP 2 Score: 58.5 bits (140), Expect = 5.8e-09
Identity = 61/236 (25.85%), Postives = 102/236 (43.22%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           M  EG  L+ + F  +L A S    +  G+++H L +K  F SD ++ + LV MY+  G 
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYE-----KISPKYMVV 120
           + +A  VFD+M  ++V         ++LIT +   G    A D+++     ++ P   V 
Sbjct: 203 VNDAQRVFDEMGDRNV------VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPD-EVT 262

Query: 121 LTAMVSGLAKGGKIGDARNVF------DQMPNWI----TFVGLLYACSHGGLVEEGRRIF 180
           L +++S  A    I   + V       D++ N I     FV +   CS    ++E R IF
Sbjct: 263 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR---IKEARFIF 322

Query: 181 HSLTNEYGISPKHEHFALEMIEAMPFA---------PNAIIWGSLMAACHVHGETE 213
            S+     I+         M  +   A          N + W +L+A    +GE E
Sbjct: 323 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENE 368


HSP 3 Score: 52.8 bits (125), Expect = 3.2e-07
Identity = 37/152 (24.34%), Postives = 71/152 (46.71%), Query Frame = 1 

Query: 9   DRFCFPPLLKAASRNLSLRTGMEIHGLASKLG-FGSDPFVETGLVRMYAASGRIMEAGFV 68
           D      ++ A +   +++ G E+HG   K     +D  +    V MYA   RI EA F+
Sbjct: 252 DEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFI 311

Query: 69  FDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGG 128
           FD M  ++V         +++I+ YA   +   A  ++ K++ + +V   A+++G  + G
Sbjct: 312 FDSMPIRNV------IAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 371

Query: 129 KIGDARNVF------DQMPNWITFVGLLYACS 154
           +  +A ++F         P   +F  +L AC+
Sbjct: 372 ENEEALSLFCLLKRESVCPTHYSFANILKACA 397


HSP 4 Score: 36.2 bits (82), Expect = 3.1e-02
Identity = 15/57 (26.32%), Postives = 35/57 (61.40%), Query Frame = 1 

Query: 84  LRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQMP 141
           +++ LI  Y+ CG+++    +++K+  + +    ++V+GL K G + +A ++F  MP
Sbjct: 57  IQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP 113

[Close]
BLAST of Cucsa.254370 vs. NCBI nr
Match: gi|778688466|ref|XP_011652755.1| (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g14820 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 4.5e-43
Identity = 95/158 (60.13%), Postives = 109/158 (68.99%), Query Frame = 1 

Query: 84  LRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM---- 143
           + +ALI MY  CG+ +   +++ K   K  +  T M++ L   G +  A ++F Q+    
Sbjct: 264 VNNALIDMYVKCGSPEGGREVFGKTPKKNAISWTIMINALXMHGDVHSALSLFHQIKVEN 323

Query: 144 --PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF---------------- 203
             PNWITFVGLLYACSHGGL EEGRRIFHSLTNEYGISPKHEHF                
Sbjct: 324 VEPNWITFVGLLYACSHGGLAEEGRRIFHSLTNEYGISPKHEHFGXMVDDLFCRANLLSE 383

Query: 204 ALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
           ALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK
Sbjct: 384 ALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 421

[Close]
BLAST of Cucsa.254370 vs. NCBI nr
Match: gi|778688466|ref|XP_011652755.1| (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g14820 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 9.0e-28
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 1 

Query: 1  MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
          MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR
Sbjct: 1  MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60

Query: 61 IMEAGF 67
          IMEAG+
Sbjct: 61 IMEAGY 66


HSP 2 Score: 129.4 bits (324), Expect = 7.6e-27
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 77  NFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVF 136
           NFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVF
Sbjct: 121 NFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNVF 180

Query: 137 DQM 140
           DQM
Sbjct: 181 DQM 183


HSP 3 Score: 56.2 bits (134), Expect = 8.2e-05
Identity = 42/139 (30.22%), Postives = 59/139 (42.45%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           M+   L LD      +L   +R  +L  G +IH   +K  F  DP + + L+ MYA+ G 
Sbjct: 82  MKRTSLELDEMILSTVLSVCARAETLDFGTKIHEFIAKKNFVMDPRLRSALITMYASCGA 141

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMV 120
           +  A  +++K+S         P+    L  M +                           
Sbjct: 142 MDLAWDLYEKIS---------PKYMVVLTAMVSG-------------------------- 183

Query: 121 SGLAKGGKIGDARNVFDQM 140
             LAKGGKIGDARNVFDQM
Sbjct: 202 --LAKGGKIGDARNVFDQM 183


HSP 4 Score: 166.8 bits (421), Expect = 4.3e-38
Identity = 90/232 (38.79%), Postives = 132/232 (56.90%), Query Frame = 1 

Query: 9   DRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGRIMEAGFVF 68
           D  C+  ++   + +   +  + +       G   DP     ++      G + +A +V 
Sbjct: 320 DLVCWSAMISGYAESDQPQEALRLFAEMEASGLRPDPVTMLSVISACGHLGALDQAKWVH 379

Query: 69  DKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGK 128
             +       V+   + +ALI MYA CG ++ A +++E +  + ++  T M+S  A  G+
Sbjct: 380 LYVDKNGFGRVLS--VNNALIDMYAKCGNLEKATEVFENMRRRNVISWTTMISAFAIHGE 439

Query: 129 IGDARNVFDQM------PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF- 188
             +A N F+QM      PN +TFVG+LYACSH GLVEEGRR+F S+ +EY I+PKHEH+ 
Sbjct: 440 ASNALNFFNQMKDENFEPNGVTFVGVLYACSHAGLVEEGRRVFESMIDEYNITPKHEHYG 499

Query: 189 --------------ALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
                         ALE+IEAMPFAPN +IWGSLMAAC +HGETELGE+AA+
Sbjct: 500 CMVDLFGRAGLLREALEVIEAMPFAPNVVIWGSLMAACQIHGETELGEYAAR 549

[Close]
BLAST of Cucsa.254370 vs. NCBI nr
Match: gi|694388278|ref|XP_009369855.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like [Pyrus x bretschneideri])

HSP 1 Score: 117.5 bits (293), Expect = 3.0e-23
Identity = 67/143 (46.85%), Postives = 88/143 (61.54%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           MR E + +DRF  PPLLKA +R  +L  GMEIHG+A KLGF SDPFVETGLVRMYAASGR
Sbjct: 112 MRREDVGVDRFSIPPLLKAVARASALSEGMEIHGVAWKLGFDSDPFVETGLVRMYAASGR 171

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYM------V 120
           IM+A  +FDKMS +DV         S +I  Y   G  D A+ L+E++           +
Sbjct: 172 IMDARLMFDKMSRRDV------VAWSIMINGYCQSGHFDTAFRLFEEMKNSNAEPDPDEM 231

Query: 121 VLTAMVSGLAKGGKIGDARNVFD 138
           +L+A++S     GK+   + + D
Sbjct: 232 ILSAILSACGHAGKLAYGKAIHD 248


HSP 2 Score: 72.0 bits (175), Expect = 1.4e-09
Identity = 39/96 (40.62%), Postives = 59/96 (61.46%), Query Frame = 1 

Query: 44  DPFVETGLVRMYAASGRIMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWD 103
           D  + + ++     +G++     + D +   D+  V+D  L+SALI MYA  G+MDLA  
Sbjct: 223 DEMILSAILSACGHAGKLAYGKAIHDFIMENDI--VVDSHLQSALIAMYAGSGSMDLAQQ 282

Query: 104 LYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM 140
           L++K S K  VV TAMVSG +K G++ DAR +FDQ+
Sbjct: 283 LFDKTSQKNFVVATAMVSGYSKLGRVEDARLIFDQI 316


HSP 3 Score: 68.2 bits (165), Expect = 2.1e-08
Identity = 58/223 (26.01%), Postives = 105/223 (47.09%), Query Frame = 1 

Query: 9   DRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGRIMEAGFVF 68
           D      +L A      L  G  IH    +     D  +++ L+ MYA SG +  A  +F
Sbjct: 223 DEMILSAILSACGHAGKLAYGKAIHDFIMENDIVVDSHLQSALIAMYAGSGSMDLAQQLF 282

Query: 69  DKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGK 128
           DK S K  NFV+     +A+++ Y+  G ++ A  ++++I  K +V  +AM+SG A+  +
Sbjct: 283 DKTSQK--NFVV----ATAMVSGYSKLGRVEDARLIFDQIVEKDLVCWSAMISGYAESDQ 342

Query: 129 IGDARNVFDQM------PNWITFVGLLYACSHGGLVEEGR---------------RIFHS 188
             +A  +F +M      P+ +T + ++ AC H G +++ +                + ++
Sbjct: 343 PQEALRLFAEMEASGLRPDPVTMLSVISACGHLGALDQAKWVHLYVDKNGFGRVLSVNNA 402

Query: 189 LTNEYGISPKHEHFALEMIEAMPFAPNAIIWGSLMAACHVHGE 211
           L + Y      E  A E+ E M    N I W ++++A  +HGE
Sbjct: 403 LIDMYAKCGNLEK-ATEVFENMR-RRNVISWTTMISAFAIHGE 437


HSP 4 Score: 163.7 bits (413), Expect = 3.7e-37
Identity = 92/232 (39.66%), Postives = 129/232 (55.60%), Query Frame = 1 

Query: 9   DRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGRIMEAGFVF 68
           D  C+  ++   + + S +  + +      LG   D      ++   A  G + +A ++ 
Sbjct: 319 DLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIH 378

Query: 69  DKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGK 128
             +        +   + +ALI MYA CG+++ A  +++K+  K ++  T M+S  A  G 
Sbjct: 379 LFVDKNGFGGALP--INNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGD 438

Query: 129 IGDARNVFDQM------PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF- 188
            G A   F QM      PN ITFVG+LYACSH GLVEEGR+IF+S+ NE+ I+PKH H+ 
Sbjct: 439 AGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYG 498

Query: 189 --------------ALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
                         ALE++EAMP APN IIWGSLMAAC VHGE ELGEFAAK
Sbjct: 499 CMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAK 548

[Close]
BLAST of Cucsa.254370 vs. NCBI nr
Match: gi|225432698|ref|XP_002278762.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Vitis vinifera])

HSP 1 Score: 115.5 bits (288), Expect = 1.1e-22
Identity = 68/142 (47.89%), Postives = 89/142 (62.68%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           MR +GL++DRF FPPLLKA SR  SL  G+EIHGLA+KLGF SDPFV+TGLVRMYAA GR
Sbjct: 113 MRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGR 172

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEK-----ISPKYMVV 120
           I EA  +FDKM H+DV         S +I  Y   G  + A  L+E+     + P  M +
Sbjct: 173 IAEARLMFDKMFHRDV------VTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEM-M 232

Query: 121 LTAMVSGLAKGGKIGDARNVFD 138
           L+ ++S   + G +   + + D
Sbjct: 233 LSTVLSACGRAGNLSYGKMIHD 247


HSP 2 Score: 85.1 bits (209), Expect = 1.7e-13
Identity = 52/134 (38.81%), Postives = 81/134 (60.45%), Query Frame = 1 

Query: 48  ETGLVRMYAASGRIMEAGFVFDKMSHKDV---NFVMDPRLRSALITMYASCGAMDLAWDL 107
           E  L  + +A GR       + KM H  +   N V+DP L+SAL+TMYASCG+MDLA +L
Sbjct: 223 EMMLSTVLSACGRA--GNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNL 282

Query: 108 YEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM--PNWITFVGLLYACSHGGLVEEGR 167
           +EK++PK +V  TAMV+G +K G+I +AR+VF+QM   + + +  ++   +     +E  
Sbjct: 283 FEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEAL 342

Query: 168 RIFHSLTNEYGISP 177
            +F+ +    GI P
Sbjct: 343 NLFNEM-QSLGIKP 353


HSP 3 Score: 72.0 bits (175), Expect = 1.4e-09
Identity = 59/230 (25.65%), Postives = 111/230 (48.26%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           M+   +  D      +L A  R  +L  G  IH    +     DP +++ LV MYA+ G 
Sbjct: 214 MKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGS 273

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMV 120
           +  A  +F+KM+ K  N V      +A++T Y+  G ++ A  ++ ++  K +V  +AM+
Sbjct: 274 MDLALNLFEKMTPK--NLVAS----TAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMI 333

Query: 121 SGLAKGGKIGDARNVFDQM------PNWITFVGLLYACSHGGLVEEGRRIFHSL-TNEYG 180
           SG A+     +A N+F++M      P+ +T + ++ AC+H G +++ + I   +  N +G
Sbjct: 334 SGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFG 393

Query: 181 ISPKHEHFALEM-------------IEAMPFAPNAIIWGSLMAACHVHGE 211
            +    +  +EM              + MP   N I W  +++A  +HG+
Sbjct: 394 GALPINNALIEMYAKCGSLERARRIFDKMP-RKNVISWTCMISAFAMHGD 436


HSP 4 Score: 47.8 bits (112), Expect = 2.9e-02
Identity = 29/114 (25.44%), Postives = 55/114 (48.25%), Query Frame = 1 

Query: 76  VNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNV 135
           + F  DP +++ L+ MYA+CG +  A  +++K+  + +V  + M+ G  + G   DA  +
Sbjct: 151 LGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLL 210

Query: 136 FDQMPNW------ITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHFAL 184
           F++M N+      +    +L AC   G +  G+ I   +     +   H   AL
Sbjct: 211 FEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSAL 264


HSP 5 Score: 163.3 bits (412), Expect = 4.8e-37
Identity = 89/232 (38.36%), Postives = 131/232 (56.47%), Query Frame = 1 

Query: 9   DRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGRIMEAGFVF 68
           D  C+  ++   + +   +  + +       G   DP     +V      G + +A +V 
Sbjct: 320 DLVCWSAMISGYAESDRPQEALRLFAEMEASGLRPDPVTMLSVVSACGHLGALDQAKWVH 379

Query: 69  DKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGK 128
             +       V+   + +ALI MYA CG ++ A ++++ +  + ++  T M+S  A  G+
Sbjct: 380 LYVDKNGFGRVLS--VNNALIDMYAKCGNLEKATEVFDNMRRRNVISWTTMISAFAIHGE 439

Query: 129 IGDARNVFDQM------PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF- 188
             +A N F+QM      PN +TFVG+LYACSH GLVEEGRR+F S+ +EY I+PKHEH+ 
Sbjct: 440 ASNALNFFNQMKDENFEPNGVTFVGVLYACSHAGLVEEGRRVFESMIDEYNITPKHEHYG 499

Query: 189 --------------ALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
                         ALE+IEAMPFAPN +IW SLMAAC +HGETELGE+AA+
Sbjct: 500 CMVDLFGRAGLLREALEVIEAMPFAPNVVIWSSLMAACQIHGETELGEYAAR 549

[Close]
BLAST of Cucsa.254370 vs. NCBI nr
Match: gi|658011498|ref|XP_008340993.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Malus domestica])

HSP 1 Score: 113.6 bits (283), Expect = 4.3e-22
Identity = 66/143 (46.15%), Postives = 86/143 (60.14%), Query Frame = 1 

Query: 1   MRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGR 60
           MR E + +DRF  PPLLKA +R  +L  GMEIH +A KLGF SDPFVETGLVRMYAA GR
Sbjct: 112 MRREDVGVDRFSIPPLLKAVARASALSEGMEIHXVAWKLGFHSDPFVETGLVRMYAACGR 171

Query: 61  IMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYM------V 120
           IM+A  VFDKMS +DV         S +I  Y   G  D A+ L+E++           +
Sbjct: 172 IMDARLVFDKMSRRDV------VAWSIMINGYCQSGHFDTAFRLFEEMKNSNAEPDPDEM 231

Query: 121 VLTAMVSGLAKGGKIGDARNVFD 138
           +L+A++S     GK+   + + D
Sbjct: 232 ILSAILSACGHAGKLAYGKAIHD 248


HSP 2 Score: 73.6 bits (179), Expect = 5.0e-10
Identity = 40/96 (41.67%), Postives = 59/96 (61.46%), Query Frame = 1 

Query: 44  DPFVETGLVRMYAASGRIMEAGFVFDKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWD 103
           D  + + ++     +G++     + D +   D+  V+D  LRSALI MYA  G+MDLA  
Sbjct: 223 DEMILSAILSACGHAGKLAYGKAIHDFIMENDI--VVDSHLRSALIAMYAGSGSMDLAQQ 282

Query: 104 LYEKISPKYMVVLTAMVSGLAKGGKIGDARNVFDQM 140
           L++K S K  VV TAMVSG +K G++ DAR +FDQ+
Sbjct: 283 LFDKTSQKNFVVATAMVSGYSKLGRVEDARLIFDQI 316


HSP 3 Score: 66.2 bits (160), Expect = 7.9e-08
Identity = 57/223 (25.56%), Postives = 104/223 (46.64%), Query Frame = 1 

Query: 9   DRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGRIMEAGFVF 68
           D      +L A      L  G  IH    +     D  + + L+ MYA SG +  A  +F
Sbjct: 223 DEMILSAILSACGHAGKLAYGKAIHDFIMENDIVVDSHLRSALIAMYAGSGSMDLAQQLF 282

Query: 69  DKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGK 128
           DK S K  NFV+     +A+++ Y+  G ++ A  ++++I  K +V  +AM+SG A+  +
Sbjct: 283 DKTSQK--NFVV----ATAMVSGYSKLGRVEDARLIFDQIVEKDLVCWSAMISGYAESDR 342

Query: 129 IGDARNVFDQM------PNWITFVGLLYACSHGGLVEEGR---------------RIFHS 188
             +A  +F +M      P+ +T + ++ AC H G +++ +                + ++
Sbjct: 343 PQEALRLFAEMEASGLRPDPVTMLSVVSACGHLGALDQAKWVHLYVDKNGFGRVLSVNNA 402

Query: 189 LTNEYGISPKHEHFALEMIEAMPFAPNAIIWGSLMAACHVHGE 211
           L + Y      E  A E+ + M    N I W ++++A  +HGE
Sbjct: 403 LIDMYAKCGNLEK-ATEVFDNMR-RRNVISWTTMISAFAIHGE 437


HSP 4 Score: 50.1 bits (118), Expect = 5.9e-03
Identity = 41/176 (23.30%), Postives = 78/176 (44.32%), Query Frame = 1 

Query: 16  LLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGRIMEAGFVFDKMSHKD 75
           LL+  SR       + ++    +   G D F    L++  A +  + E G     ++   
Sbjct: 92  LLREFSRRAEPDKALLVYERMRREDVGVDRFSIPPLLKAVARASALSE-GMEIHXVAW-K 151

Query: 76  VNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGKIGDARNV 135
           + F  DP + + L+ MYA+CG +  A  +++K+S + +V  + M++G  + G    A  +
Sbjct: 152 LGFHSDPFVETGLVRMYAACGRIMDARLVFDKMSRRDVVAWSIMINGYCQSGHFDTAFRL 211

Query: 136 FDQM--------PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHFAL 184
           F++M        P+ +    +L AC H G +  G+ I   +     +   H   AL
Sbjct: 212 FEEMKNSNAEPDPDEMILSAILSACGHAGKLAYGKAIHDFIMENDIVVDSHLRSAL 265


HSP 5 Score: 162.5 bits (410), Expect = 8.1e-37
Identity = 89/232 (38.36%), Postives = 132/232 (56.90%), Query Frame = 1 

Query: 9   DRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLVRMYAASGRIMEAGFVF 68
           D  C+  ++   + +   +  + +       G   DP     ++      G + +A +V 
Sbjct: 320 DLVCWSAMISGYAESDRPQEALRLFAEMEASGLRPDPVTMLSVISACGHLGALDQAKWVH 379

Query: 69  DKMSHKDVNFVMDPRLRSALITMYASCGAMDLAWDLYEKISPKYMVVLTAMVSGLAKGGK 128
             +       V+   + +ALI MYA CG ++ A +++E +  + ++  T M+S  A  G+
Sbjct: 380 LYVDKNGFGRVLS--VNNALIDMYAKCGNLEKATEVFENMRRRNVISWTTMISAFAIHGE 439

Query: 129 IGDARNVFDQM------PNWITFVGLLYACSHGGLVEEGRRIFHSLTNEYGISPKHEHF- 188
             +A N F+QM      PN +TFVG+LYACSH GLVEEGRR+F S+ +EY I+PKHEH+ 
Sbjct: 440 AINALNFFNQMKDENFEPNGVTFVGVLYACSHMGLVEEGRRVFESMIDEYNITPKHEHYG 499

Query: 189 --------------ALEMIEAMPFAPNAIIWGSLMAACHVHGETELGEFAAK 220
                         ALE+I+AMPFAPN +IWGSLMAAC +HGETELGE+AA+
Sbjct: 500 CMVDLFGRAGLLREALEVIQAMPFAPNVVIWGSLMAACQIHGETELGEYAAR 549

The following BLAST results are available for this feature:
BLAST of Cucsa.254370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP311_ARATH2.0e-3547.77Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN... [more]
PP316_ARATH4.2e-2538.71Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidop... [more]
PP121_ARATH7.2e-2531.86Pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Arabidop... [more]
PP307_ARATH2.1e-2440.91Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN... [more]
PP151_ARATH4.6e-2429.58Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN... [more]
BLAST of Cucsa.254370 vs. TrEMBL
Match NameE-valueIdentityDescription
D7T700_VITVI2.5e-3739.66Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03630 PE=4 SV=... [more]
D7T700_VITVI8.0e-2347.89Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03630 PE=4 SV=... [more]
A0A0B0NLW2_GOSAR5.1e-3037.39Pentatricopeptide repeat-containing-like protein OS=Gossypium arboreum GN=F383_0... [more]
W9R134_9ROSA2.3e-3039.32Uncharacterized protein OS=Morus notabilis GN=L484_005425 PE=4 SV=1[more]
A0A0D2T7B3_GOSRA3.8e-1740.43Uncharacterized protein OS=Gossypium raimondii GN=B456_008G264200 PE=4 SV=1[more]
BLAST of Cucsa.254370 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G14820.11.1e-3647.77 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G16835.12.4e-2638.71 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G74600.14.0e-2631.86 pentatricopeptide (PPR) repeat-containing protein[more]
AT4G13650.11.2e-2540.91 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G13600.12.6e-2529.58 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Cucsa.254370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778688466|ref|XP_011652755.1|4.5e-4360.13PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g... [more]
gi|778688466|ref|XP_011652755.1|9.0e-2898.48PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g... [more]
gi|694388278|ref|XP_009369855.1|3.0e-2346.85PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like [Pyrus x b... [more]
gi|225432698|ref|XP_002278762.1|1.1e-2247.89PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Vitis vinifera... [more]
gi|658011498|ref|XP_008340993.1|4.3e-2246.15PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Malus domestic... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.254370.1Cucsa.254370.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 114..140
score: 0.0016coord: 51..74
score: 0.71coord: 86..107
score:
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 115..139
score: 2.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 1..219
score: 6.4E
NoneNo IPR availablePANTHERPTHR24015:SF581SUBFAMILY NOT NAMEDcoord: 1..219
score: 6.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.254370Csa3G146580Cucumber (Chinese Long) v2cgycuB366
Cucsa.254370CSPI03G13050Wild cucumber (PI 183967)cgycpiB383
Cucsa.254370CmaCh06G014020Cucurbita maxima (Rimu)cgycmaB0727
Cucsa.254370CmoCh06G014060Cucurbita moschata (Rifu)cgycmoB0718
Cucsa.254370Lsi05G016110Bottle gourd (USVL1VR-Ls)cgylsiB415
Cucsa.254370Cp4.1LG08g04190Cucurbita pepo (Zucchini)cgycpeB0687
Cucsa.254370CsaV3_3G013210Cucumber (Chinese Long) v3cgycucB387
Cucsa.254370Cla97C05G086260Watermelon (97103) v2cgywmbB452
Cucsa.254370Bhi01G000577Wax gourdcgywgoB522
Cucsa.254370Carg17425Silver-seed gourdcarcgyB0681
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.254370Cucurbita pepo (Zucchini)cgycpeB0676
Cucsa.254370Cucurbita pepo (Zucchini)cgycpeB0682
Cucsa.254370Bottle gourd (USVL1VR-Ls)cgylsiB412
Cucsa.254370Melon (DHL92) v3.6.1cgymedB432
Cucsa.254370Silver-seed gourdcarcgyB0134
Cucsa.254370Silver-seed gourdcarcgyB0269
Cucsa.254370Silver-seed gourdcarcgyB0383
Cucsa.254370Silver-seed gourdcarcgyB0970
Cucsa.254370Watermelon (97103) v2cgywmbB453
Cucsa.254370Watermelon (97103) v2cgywmbB458
Cucsa.254370Wax gourdcgywgoB511
Cucsa.254370Wax gourdcgywgoB533
Cucsa.254370Cucumber (Gy14) v1cgycgyB123
Cucsa.254370Cucurbita maxima (Rimu)cgycmaB0714
Cucsa.254370Cucurbita maxima (Rimu)cgycmaB0709
Cucsa.254370Cucurbita maxima (Rimu)cgycmaB0731
Cucsa.254370Cucurbita moschata (Rifu)cgycmoB0700
Cucsa.254370Cucurbita moschata (Rifu)cgycmoB0706
Cucsa.254370Cucurbita moschata (Rifu)cgycmoB0707
Cucsa.254370Cucurbita moschata (Rifu)cgycmoB0720
Cucsa.254370Melon (DHL92) v3.5.1cgymeB439
Cucsa.254370Watermelon (Charleston Gray)cgywcgB442
Cucsa.254370Watermelon (Charleston Gray)cgywcgB451
Cucsa.254370Watermelon (Charleston Gray)cgywcgB452
Cucsa.254370Watermelon (97103) v1cgywmB472
Cucsa.254370Watermelon (97103) v1cgywmB479
Cucsa.254370Watermelon (97103) v1cgywmB483