Cp4.1LG08g04190.1 (mRNA) Cucurbita pepo (Zucchini)

NameCp4.1LG08g04190.1
TypemRNA
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCp4.1LG08 : 1721130 .. 1723647 (+)
Sequence length1101
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACGCTCAGCCACACAACCTCCATCCTCCCTCTTCATCTCCCCCCATACCCCACCAGACCCACCGCTCTCTCCGCCGCTCTCTCCTCCGCCACCAGCCTCCTCCACATCAAACAAGTCCACGCTCAAATCCTCCGCTCCAAATTCGAACGCTCCGATTCCGATTCCCTTCTTTTCAAACTGATTCTTTCCTCTTGTGCTCTCTCGCCCAGCCTCGACTATGCCCTCTCTGTGTTCGATCAAATTCCTGAGCCCAAGACCCGTTTCTGCAACAAGCTTCTGCGTGAATTATCTCGAGGTTCTGAGCCGGAGAATGCGCTTTTTTTATACGAGAAGATGAGGGCTGAGGGTCTGAGTTTGGATAGGTTCTGCTTCCCACCCCTGTTAAAAGCGGCCTCGCGGAATCTTTCCTTGAGAACTGGGATGGAGATTCATGGACTCGCGTCGAAGCTGGGATTTGGTTCAGACCCATTTGTGGAGACGGGATTGATTAGAATGTATGCTGCCTGTAGAAGGATAATGGAAGCCCGGTTGGTGTTTGATAAAATGTCTCAGAGGGATGTCGTCACTTGGAGCATCATGATTGATGGGTATGAAACTAATTTTGTTGCTCTGCATTTAGTAGTGATGATGGATGTGGTAGAATTCTGTTAATTATACGCTTTCTTGCATTGTTATGGTTGTATCTTTCTATCTTATGATTTTGAATTCATGGTCATTTTCTCCTTACCCTCAAATATTCAGGTATTGCATAAGTGGTTATTATGATCTCGCCTTTCAACTCTTTGAAGAAATGAAGAGAACAGGCTTGGAACCAGATGAAATGATTCTTTCAACTATTCTTTCTGCCTGCGCCCGAGCTGGAAATTTGGATTTTGGAACAAAAATACACGAGTTCATAACTAAGAACAATATTGTCATGGATCCTCACTTACAAAGTGCTCTCATCAAGATGTATGCAAGTTGTGGCTCCACGGACTTGGCTTGGGATCTGTATGAAAAGATAACCCCTAAGAACATGGTTATTTCGACTGCCATGGTTTCTGGGCTTGCAAAAGGTGGACAGATTGGTGATGCTCGCTGTGTGTTTGATCAAATGGTGGAGAAGGACTTGATATGTTGGAGTGCAATGATTTCTGGATATACTGAGAGTGATTGCCCTCAAGAGGCTCTTGTACTGTTCAAGAAAATGCAACAACTGGGAATGAAACCTGATGTAGTCACCATGTTGAGTGTCATCTCAGCTTGTGCTCATCTTGGTGCATTAGATCAAGCCAAATGGATCCAGATTTATGTTGATAAAAATGGGTTCGGCAAGGCATTGTCTATCAATAATGCACTCATTGATATGTATGCCAAATGTGGGAGTCTAGAAGGAGCGAGAGAAATCTTTGGAAAGATGCCAAAGAAAAATGTTATATCTTGGACGAGTATGATTAATGCTCTTGCAATGCATGGAGATGCTCATAATGCCTTAAGTCTATTTCATCAAATGAAAGTTGAAAACGTTGAGCCTAATTGGATCACATTTGTGGGGTTGCTTTATGCTTGTAGCCATGGAGGTCTAGTTGAGGAGGGCCAAAGAATATTCCACTCGATGATCAATGAGTATGGCATAAGTCCCAAGCACGAGCATTTTGGTTGTATGGTTGACCTCTTTGGCCGTGCAAAATTGCTGAGAGAAGCTCTTGAGGTGGTAGAAGCAATGCCATTTGCTCCTAATGCTATTATTTGGGGATCCCTTATGGCTGCTTGTCAGCTCCACGGTGACACTGAGTTGGGAGAATTTGCTGCTAAACAAGTTCTCAAGCTCGAGCCAGATCACGATGGCGCCCTTGTTGTCTTATCGAACTTATATGCTAAAGAAAGAAGATGGGAAGACGCTGGGGATGTTAGAAAACTTATGAACGAGATGGGCGTTTCGAAAGAGAGAGGATGCAGTAGAATTGAATTGAACAATGAGGTGCATGAATTTCAAATGGCAGATAGAAAACACAAGCAAGCTGATCTAATATATCAAAAGTTAAATGAGGTAGTTCAAACGTTGAAGCTGGCTGGTTATACACCACAGATCAACTGTGTGCTCGTTGATTTAGACGAAGAGGAAAAGAAGGAATTAGTCCTCTGGCACAGTGAGAAACTGGCATTGTGCTATGCCCTTATGAATGAAGGGTCACGCATTTGCATTATAAAGAACCTTCGGATTTGTGAGGATTGTCATGCTTTTATGAAACTAGCCTCAAAGGTGTATGCCAGAGAGATTGTCGTTCGGGACAGAACTCGGTTTCACCATTACAGAGACGGTTCGTGTTCTTGTAAAGACTACTGGTGACCAATTCTTGTTACTTTTACAGGACGGTTCGTGTTCTTGTAAAGACGGTATGTGTTCATGTTCTCTGATATCTTTTATAAATTTCCAGCCAGAAAAAGTAACTATCAAATAGATAGAAACCTGATTCCATGAAGTTTACATTTACAGATAGTATCAACTAACATCTTGATCCTAGAGACATGA

mRNA sequence

ATGGAAACGCTCAGCCACACAACCTCCATCCTCCCTCTTCATCTCCCCCCATACCCCACCAGACCCACCGCTCTCTCCGCCGCTCTCTCCTCCGCCACCAGCCTCCTCCACATCAAACAAGTCCACGCTCAAATCCTCCGCTCCAAATTCGAACGCTCCGATTCCGATTCCCTTCTTTTCAAACTGATTCTTTCCTCTTGTGCTCTCTCGCCCAGCCTCGACTATGCCCTCTCTGTGTTCGATCAAATTCCTGAGCCCAAGACCCGTTTCTGCAACAAGCTTCTGCGTGAATTATCTCGAGGTTCTGAGCCGGAGAATGCGCTTTTTTTATACGAGAAGATGAGGGCTGAGGGTCTGAGTTTGGATAGGTTCTGCTTCCCACCCCTGTTAAAAGCGGCCTCGCGGAATCTTTCCTTGAGAACTGGGATGGAGATTCATGGACTCGCGTCGAAGCTGGGATTTGGTTCAGACCCATTTGTGGAGACGGGATTGATTAGAATGTATGCTGCCTGTAGAAGGATAATGGAAGCCCGGTTGGTGTTTGATAAAATGTCTCAGAGGGATGTCGTCACTTGGAGCATCATGATTGATGGGTATTGCATAAGTGGTTATTATGATCTCGCCTTTCAACTCTTTGAAGAAATGAAGAGAACAGGCTTGGAACCAGATGAAATGATTCTTTCAACTATTCTTTCTGCCTGCGCCCGAGCTGGAAATTTGGATTTTGGAACAAAAATACACGAGTTCATAACTAAGAACAATATTGTCATGGATCCTCACTTACAAAGTGCTCTCATCAAGATGTATGCAAGTTGTGGCTCCACGGACTTGGCTTGGGATCTGTATGAAAAGATAACCCCTAAGAACATGGTTATTTCGACTGCCATGGTTTCTGGGCTTGCAAAAGGTGGACAGATTGGTGATGCTCGCTGTGTGTTTGATCAAATGGTGGAGAAGGACTTGATATGTTGGAGTGCAATGATTTCTGGATATACTGAGAGTGATTGCCCTCAAGAGGCTCTTGTACTGTTCAAGAAAATGCAACAACTGGGAATGAAACCTGATATAGTATCAACTAACATCTTGATCCTAGAGACATGA

Coding sequence (CDS)

ATGGAAACGCTCAGCCACACAACCTCCATCCTCCCTCTTCATCTCCCCCCATACCCCACCAGACCCACCGCTCTCTCCGCCGCTCTCTCCTCCGCCACCAGCCTCCTCCACATCAAACAAGTCCACGCTCAAATCCTCCGCTCCAAATTCGAACGCTCCGATTCCGATTCCCTTCTTTTCAAACTGATTCTTTCCTCTTGTGCTCTCTCGCCCAGCCTCGACTATGCCCTCTCTGTGTTCGATCAAATTCCTGAGCCCAAGACCCGTTTCTGCAACAAGCTTCTGCGTGAATTATCTCGAGGTTCTGAGCCGGAGAATGCGCTTTTTTTATACGAGAAGATGAGGGCTGAGGGTCTGAGTTTGGATAGGTTCTGCTTCCCACCCCTGTTAAAAGCGGCCTCGCGGAATCTTTCCTTGAGAACTGGGATGGAGATTCATGGACTCGCGTCGAAGCTGGGATTTGGTTCAGACCCATTTGTGGAGACGGGATTGATTAGAATGTATGCTGCCTGTAGAAGGATAATGGAAGCCCGGTTGGTGTTTGATAAAATGTCTCAGAGGGATGTCGTCACTTGGAGCATCATGATTGATGGGTATTGCATAAGTGGTTATTATGATCTCGCCTTTCAACTCTTTGAAGAAATGAAGAGAACAGGCTTGGAACCAGATGAAATGATTCTTTCAACTATTCTTTCTGCCTGCGCCCGAGCTGGAAATTTGGATTTTGGAACAAAAATACACGAGTTCATAACTAAGAACAATATTGTCATGGATCCTCACTTACAAAGTGCTCTCATCAAGATGTATGCAAGTTGTGGCTCCACGGACTTGGCTTGGGATCTGTATGAAAAGATAACCCCTAAGAACATGGTTATTTCGACTGCCATGGTTTCTGGGCTTGCAAAAGGTGGACAGATTGGTGATGCTCGCTGTGTGTTTGATCAAATGGTGGAGAAGGACTTGATATGTTGGAGTGCAATGATTTCTGGATATACTGAGAGTGATTGCCCTCAAGAGGCTCTTGTACTGTTCAAGAAAATGCAACAACTGGGAATGAAACCTGATATAGTATCAACTAACATCTTGATCCTAGAGACATGA

Protein sequence

METLSHTTSILPLHLPPYPTRPTALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVSTNILILET
BLAST of Cp4.1LG08g04190.1 vs. Swiss-Prot
Match: PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.8e-87
Identity = 173/348 (49.71%), Postives = 233/348 (66.95%), Query Frame = 1

Query: 15  LPPYPTRPTALSAAL---SSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCALSP 74
           LPP P   TA +  L   S   SL HIKQ+HA ILR+       +S LF L +SS +++ 
Sbjct: 3   LPP-PIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHK-LNSFLFNLSVSSSSIN- 62

Query: 75  SLDYALSVFDQIPEPKTRFC-NKLLRELSRGSEPENALFLYEKMRAEGLSLDRFCFPPLL 134
            L YAL+VF  IP P      N  LR+LSR SEP   +  Y+++R  G  LD+F F P+L
Sbjct: 63  -LSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPIL 122

Query: 135 KAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDVV 194
           KA S+  +L  GME+HG+A K+    DPFVETG + MYA+C RI  AR VFD+MS RDVV
Sbjct: 123 KAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVV 182

Query: 195 TWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKIHEFI 254
           TW+ MI+ YC  G  D AF+LFEEMK + + PDEMIL  I+SAC R GN+ +   I+EF+
Sbjct: 183 TWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL 242

Query: 255 TKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQIGDAR 314
            +N++ MD HL +AL+ MYA  G  D+A + + K++ +N+ +STAMVSG +K G++ DA+
Sbjct: 243 IENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQ 302

Query: 315 CVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
            +FDQ  +KDL+CW+ MIS Y ESD PQEAL +F++M   G+KPD+VS
Sbjct: 303 VIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVS 346

BLAST of Cp4.1LG08g04190.1 vs. Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.8e-50
Identity = 123/357 (34.45%), Postives = 200/357 (56.02%), Query Frame = 1

Query: 12  PLHLPPYPT-----RPTALS------AALSSATSLLHIKQVHAQILRS-KFERSDSDSLL 71
           PL LP +P      +PT  +      + +    SL  +KQ H  ++R+  F    S S L
Sbjct: 9   PLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKL 68

Query: 72  FKLI-LSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEG 131
           F +  LSS A   SL+YA  VFD+IP+P +   N L+R  + G +P  +++ +  M +E 
Sbjct: 69  FAMAALSSFA---SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSES 128

Query: 132 LSL-DRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEA 191
               +++ FP L+KAA+   SL  G  +HG+A K   GSD FV   LI  Y +C  +  A
Sbjct: 129 QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSA 188

Query: 192 RLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARA 251
             VF  + ++DVV+W+ MI+G+   G  D A +LF++M+   ++   + +  +LSACA+ 
Sbjct: 189 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI 248

Query: 252 GNLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMV 311
            NL+FG ++  +I +N + ++  L +A++ MY  CGS + A  L++ +  K+ V  T M+
Sbjct: 249 RNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 308

Query: 312 SGLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ-QLGMK 354
            G A       AR V + M +KD++ W+A+IS Y ++  P EAL++F ++Q Q  MK
Sbjct: 309 DGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMK 362

BLAST of Cp4.1LG08g04190.1 vs. Swiss-Prot
Match: PP235_ARATH (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2)

HSP 1 Score: 185.7 bits (470), Expect = 9.4e-46
Identity = 102/319 (31.97%), Postives = 175/319 (54.86%), Query Frame = 1

Query: 39  KQVHAQILRSKFERSDSDSLLFKLILSSCA-LSPSLDYALSVFDQIPEPKTRFCNKLLRE 98
           KQ+H+Q +      + + +   KL +  C+ L   + YA  +F +IPEP     N +++ 
Sbjct: 51  KQLHSQSITRGV--APNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKG 110

Query: 99  LSRGSEPENALFLYEKMRAEGLSLDRFCFPPLLKAASRNL-SLRTGMEIHGLASKLGFGS 158
            S+       + LY  M  EG++ D   FP LL    R+  +L  G ++H    K G GS
Sbjct: 111 WSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGS 170

Query: 159 DPFVETGLIRMYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMK 218
           + +V+  L++MY+ C  +  AR VFD+  + DV +W++MI GY     Y+ + +L  EM+
Sbjct: 171 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 230

Query: 219 RTGLEPDEMILSTILSACARAGNLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTD 278
           R  + P  + L  +LSAC++  + D   ++HE++++        L++AL+  YA+CG  D
Sbjct: 231 RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMD 290

Query: 279 LAWDLYEKITPKNMVISTAMVSGLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDC 338
           +A  ++  +  ++++  T++V G  + G +  AR  FDQM  +D I W+ MI GY  + C
Sbjct: 291 IAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGC 350

Query: 339 PQEALVLFKKMQQLGMKPD 356
             E+L +F++MQ  GM PD
Sbjct: 351 FNESLEIFREMQSAGMIPD 367

BLAST of Cp4.1LG08g04190.1 vs. Swiss-Prot
Match: PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.3e-44
Identity = 105/339 (30.97%), Postives = 180/339 (53.10%), Query Frame = 1

Query: 25  LSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCALSPS--LDYALSVFDQ 84
           L + L     LLH+KQ+ AQ++ +       D      +++ CALS S  LDY++ +   
Sbjct: 56  LLSLLEKCKLLLHLKQIQAQMIINGLIL---DPFASSRLIAFCALSESRYLDYSVKILKG 115

Query: 85  IPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLSL---DRFCFPPLLKAASRNLSL 144
           I  P     N  +R  S    P+ +  LY++M   G      D F +P L K  +     
Sbjct: 116 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 175

Query: 145 RTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDVVTWSIMIDGY 204
             G  I G   KL       V    I M+A+C  +  AR VFD+   RD+V+W+ +I+GY
Sbjct: 176 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 235

Query: 205 CISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKIHEFITKNNIVMDP 264
              G  + A  +++ M+  G++PD++ +  ++S+C+  G+L+ G + +E++ +N + M  
Sbjct: 236 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 295

Query: 265 HLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQIGDARCVFDQMVEK 324
            L +AL+ M++ CG    A  +++ +  + +V  T M+SG A+ G +  +R +FD M EK
Sbjct: 296 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 355

Query: 325 DLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
           D++ W+AMI G  ++   Q+AL LF++MQ    KPD ++
Sbjct: 356 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT 391

BLAST of Cp4.1LG08g04190.1 vs. Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.0e-44
Identity = 101/298 (33.89%), Postives = 169/298 (56.71%), Query Frame = 1

Query: 26  SAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCALSPSLDYALSVFDQIPE 85
           ++ + SAT    +KQ+HA++L    + S    L+ KLI +S +    + +A  VFD +P 
Sbjct: 25  ASLIDSATHKAQLKQIHARLLVLGLQFSGF--LITKLIHASSSFG-DITFARQVFDDLPR 84

Query: 86  PKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLSLDRFCFPPLLKAASRNLSLRTGMEI 145
           P+    N ++R  SR +  ++AL +Y  M+   +S D F FP LLKA S    L+ G  +
Sbjct: 85  PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 144

Query: 146 HGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFD--KMSQRDVVTWSIMIDGYCISG 205
           H    +LGF +D FV+ GLI +YA CRR+  AR VF+   + +R +V+W+ ++  Y  +G
Sbjct: 145 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 204

Query: 206 YYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKIHEFITKNNIVMDPHLQS 265
               A ++F +M++  ++PD + L ++L+A     +L  G  IH  + K  + ++P L  
Sbjct: 205 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 264

Query: 266 ALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQIGDARCVFDQMVEKDL 322
           +L  MYA CG    A  L++K+   N+++  AM+SG AK G   +A  +F +M+ KD+
Sbjct: 265 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV 319

BLAST of Cp4.1LG08g04190.1 vs. TrEMBL
Match: D7T700_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03630 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 3.0e-131
Identity = 244/361 (67.59%), Postives = 288/361 (79.78%), Query Frame = 1

Query: 4   LSHTTSILPLHLPPYPTRPTALSA------ALSSATSLLHIKQVHAQILRSKFERSDSDS 63
           +S T   LP +  P P  PT L +      ALSSATSL H+KQVHAQILRSK +RS S  
Sbjct: 1   MSQTALALPPN--PNPATPTTLHSHHTLFSALSSATSLTHLKQVHAQILRSKLDRSTS-- 60

Query: 64  LLFKLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAE 123
           LL KL++SSCALS SLDYALSVF+ IP+P+T  CN+ LRELSR  EPE  L +YE+MR +
Sbjct: 61  LLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQ 120

Query: 124 GLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEA 183
           GL++DRF FPPLLKA SR  SL  G+EIHGLA+KLGF SDPFV+TGL+RMYAAC RI EA
Sbjct: 121 GLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEA 180

Query: 184 RLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARA 243
           RL+FDKM  RDVVTWSIMIDGYC SG ++ A  LFEEMK   +EPDEM+LST+LSAC RA
Sbjct: 181 RLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRA 240

Query: 244 GNLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMV 303
           GNL +G  IH+FI +NNIV+DPHLQSAL+ MYASCGS DLA +L+EK+TPKN+V STAMV
Sbjct: 241 GNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMV 300

Query: 304 SGLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIV 359
           +G +K GQI +AR VF+QMV+KDL+CWSAMISGY ESD PQEAL LF +MQ LG+KPD V
Sbjct: 301 TGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQV 357

BLAST of Cp4.1LG08g04190.1 vs. TrEMBL
Match: W9R134_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005425 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 3.9e-115
Identity = 215/360 (59.72%), Postives = 275/360 (76.39%), Query Frame = 1

Query: 1   METLSHTTSI-LPLHLPPYPTRPTALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLL 60
           M +L  +T + L   LPP PT    L+ ALSSAT+  H+KQ HAQILRSK +  +S  LL
Sbjct: 1   MSSLPESTLLSLSPALPPNPTT-ATLATALSSATTTSHLKQFHAQILRSKLDHPNS-LLL 60

Query: 61  FKLILSSCALS-PSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEG 120
            KL L+SC LS PSLDYALSVF +IP+P+ R  NKLLRE+SR  + +  L +Y +MR EG
Sbjct: 61  LKLALASCVLSPPSLDYALSVFARIPDPEPRLSNKLLREVSRRGDADKTLLVYGRMRREG 120

Query: 121 LSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEAR 180
            S+DR+ FP +LKAA +  +L  G EIHGLA+K+GF SDPFV+TGL+RMYA C RI++ R
Sbjct: 121 SSVDRYSFPAVLKAAGKTQALEEGREIHGLATKMGFDSDPFVQTGLVRMYAGCGRILDGR 180

Query: 181 LVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAG 240
           LVFDKMSQRDVV WSIMIDGY  S  +D  F L+EEM+ +G+EPDEMILSTILSAC RAG
Sbjct: 181 LVFDKMSQRDVVAWSIMIDGYSQSRLFDNVFNLYEEMRNSGVEPDEMILSTILSACGRAG 240

Query: 241 NLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVS 300
           NL  G  IH+F+ +N+++ D  L+SAL+ MYASCGS D+A +L++K++ KN+V+STAM+S
Sbjct: 241 NLSCGKAIHDFVVENSLLADSRLRSALVAMYASCGSMDIAQELFDKMSSKNLVVSTAMIS 300

Query: 301 GLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
           G +K G++ DAR +FDQMVEKDL+ WSAMI+GY ESD PQEAL LF  MQ LG++PD ++
Sbjct: 301 GYSKLGRLQDARLIFDQMVEKDLVSWSAMIAGYAESDWPQEALRLFNDMQLLGIRPDQIT 358

BLAST of Cp4.1LG08g04190.1 vs. TrEMBL
Match: V4S8H9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004433mg PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 2.2e-110
Identity = 201/346 (58.09%), Postives = 257/346 (74.28%), Query Frame = 1

Query: 19  PTRPTAL--SAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCALSP----S 78
           PT+P  L  S A+SS +SL H+KQ HAQIL+        +SLL KL+L+S +L      S
Sbjct: 7   PTKPLTLPTSTAISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSS 66

Query: 79  LDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLSLDRFCFPPLLKA 138
           L YALS+F QIP P +R  NK +R +S    P++AL ++ KM  EGL++DRF FPP+LKA
Sbjct: 67  LYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKA 126

Query: 139 ASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDVVTW 198
            +R   L  GM++HGL +KLGFGSDPFV+TGL+ MY AC RI++ARL+FDKMS RD+V W
Sbjct: 127 IARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGRILDARLMFDKMSYRDIVPW 186

Query: 199 SIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKIHEFITK 258
           S+MIDGY  +G +D    LFEEMK + +EPDEM+LS ILSAC+RAGNL +G  +HEFI  
Sbjct: 187 SVMIDGYFQNGLFDDVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIID 246

Query: 259 NNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQIGDARCV 318
           NN+ +D HLQS LI MYA+CG  D+A  L++K+  KN+V+STAMVSG ++ GQ+ DAR +
Sbjct: 247 NNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLI 306

Query: 319 FDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
           FDQMVEKDLICWSAMISGY E++ PQEAL LF +MQ  GMKPD V+
Sbjct: 307 FDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVT 352

BLAST of Cp4.1LG08g04190.1 vs. TrEMBL
Match: A0A067GGS0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004938mg PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 3.8e-110
Identity = 200/346 (57.80%), Postives = 257/346 (74.28%), Query Frame = 1

Query: 19  PTRPTAL--SAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCALSP----S 78
           PT+P  L  S A+SS +SL H+KQ HAQIL+        +SLL KL+L+S +L      S
Sbjct: 7   PTKPLTLPTSTAISSCSSLTHMKQTHAQILKLSHSHHSQNSLLLKLLLTSFSLPTTTPSS 66

Query: 79  LDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLSLDRFCFPPLLKA 138
           L YALS+F QIP P +R  NK +R +S    P++AL ++ KM  EGL++DRF FPP+LKA
Sbjct: 67  LYYALSIFSQIPAPPSRVSNKFIRAISWSHRPKHALKVFLKMLNEGLTIDRFSFPPILKA 126

Query: 139 ASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDVVTW 198
            +R   L  GM++HGL +KLGFGSDPFV+TGL+ MY AC +I++ARL+FDKMS RD+V W
Sbjct: 127 IARAEGLLEGMQVHGLGTKLGFGSDPFVQTGLVGMYGACGKILDARLMFDKMSYRDIVPW 186

Query: 199 SIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKIHEFITK 258
           S+MIDGY  +G +D    LFEEMK + +EPDEM+LS ILSAC+RAGNL +G  +HEFI  
Sbjct: 187 SVMIDGYFQNGLFDEVLNLFEEMKMSNVEPDEMVLSKILSACSRAGNLSYGEAVHEFIID 246

Query: 259 NNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQIGDARCV 318
           NN+ +D HLQS LI MYA+CG  D+A  L++K+  KN+V+STAMVSG ++ GQ+ DAR +
Sbjct: 247 NNVALDAHLQSTLITMYANCGCMDMAKGLFDKVLLKNLVVSTAMVSGYSRAGQVEDARLI 306

Query: 319 FDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
           FDQMVEKDLICWSAMISGY E++ PQEAL LF +MQ  GMKPD V+
Sbjct: 307 FDQMVEKDLICWSAMISGYAENNHPQEALKLFNEMQVCGMKPDKVT 352

BLAST of Cp4.1LG08g04190.1 vs. TrEMBL
Match: A0A067L6S3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02188 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 9.3e-109
Identity = 203/353 (57.51%), Postives = 265/353 (75.07%), Query Frame = 1

Query: 7   TTSILPLHLPPYPTRPTALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSS 66
           T+  LPL L       T L    SS+TSL H+KQVHAQILRS      S S+L KLILSS
Sbjct: 5   TSPALPLPLSSATIHTTLLPFLSSSSTSLYHLKQVHAQILRSSL----SPSILLKLILSS 64

Query: 67  CALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGL-SLDRFC 126
            +   SL+YALSVF  +P P+    NK LR LSR S+PE  L +YEK+R +GL  +DRF 
Sbjct: 65  SSSISSLEYALSVFTHLPTPRPALSNKFLRALSRSSKPETVLLVYEKIREDGLFGVDRFS 124

Query: 127 FPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMS 186
            P LLKAA++  +L  GMEIHG+A+KLGF  DPFV+TGL+ +Y AC +I+EARLVFDKMS
Sbjct: 125 LPLLLKAAAKVSALNEGMEIHGVATKLGFDKDPFVQTGLMSLYLACGKILEARLVFDKMS 184

Query: 187 QRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTK 246
            RDVVTWSIMI+GY  +G++D A + FEEMK + ++PD+++LSTI+SAC+RAGNL +G  
Sbjct: 185 YRDVVTWSIMINGYYQNGHFDEALKFFEEMKSSNVQPDKVVLSTIISACSRAGNLSYGKA 244

Query: 247 IHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQ 306
           +H+FI +NNI +DPHL+S LI MYA+CG  D+A +L+ K++ +N+V+STAMVSG ++ G 
Sbjct: 245 VHDFIIENNIEVDPHLESTLIFMYANCGCMDMAKELFFKMSSRNLVVSTAMVSGYSRVGN 304

Query: 307 IGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
           + DAR +FD+M +KDL+CWSAMISGY ESD PQEAL LF +MQ LG++PD V+
Sbjct: 305 VKDARLIFDEMDKKDLVCWSAMISGYAESDQPQEALNLFNEMQALGIEPDEVT 353

BLAST of Cp4.1LG08g04190.1 vs. TAIR10
Match: AT4G14820.1 (AT4G14820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 323.2 bits (827), Expect = 2.1e-88
Identity = 173/348 (49.71%), Postives = 233/348 (66.95%), Query Frame = 1

Query: 15  LPPYPTRPTALSAAL---SSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCALSP 74
           LPP P   TA +  L   S   SL HIKQ+HA ILR+       +S LF L +SS +++ 
Sbjct: 3   LPP-PIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHK-LNSFLFNLSVSSSSIN- 62

Query: 75  SLDYALSVFDQIPEPKTRFC-NKLLRELSRGSEPENALFLYEKMRAEGLSLDRFCFPPLL 134
            L YAL+VF  IP P      N  LR+LSR SEP   +  Y+++R  G  LD+F F P+L
Sbjct: 63  -LSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPIL 122

Query: 135 KAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDVV 194
           KA S+  +L  GME+HG+A K+    DPFVETG + MYA+C RI  AR VFD+MS RDVV
Sbjct: 123 KAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVV 182

Query: 195 TWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKIHEFI 254
           TW+ MI+ YC  G  D AF+LFEEMK + + PDEMIL  I+SAC R GN+ +   I+EF+
Sbjct: 183 TWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL 242

Query: 255 TKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQIGDAR 314
            +N++ MD HL +AL+ MYA  G  D+A + + K++ +N+ +STAMVSG +K G++ DA+
Sbjct: 243 IENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQ 302

Query: 315 CVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
            +FDQ  +KDL+CW+ MIS Y ESD PQEAL +F++M   G+KPD+VS
Sbjct: 303 VIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVS 346

BLAST of Cp4.1LG08g04190.1 vs. TAIR10
Match: AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 200.7 bits (509), Expect = 1.6e-51
Identity = 123/357 (34.45%), Postives = 200/357 (56.02%), Query Frame = 1

Query: 12  PLHLPPYPT-----RPTALS------AALSSATSLLHIKQVHAQILRS-KFERSDSDSLL 71
           PL LP +P      +PT  +      + +    SL  +KQ H  ++R+  F    S S L
Sbjct: 9   PLSLPRHPNFSNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKL 68

Query: 72  FKLI-LSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEG 131
           F +  LSS A   SL+YA  VFD+IP+P +   N L+R  + G +P  +++ +  M +E 
Sbjct: 69  FAMAALSSFA---SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSES 128

Query: 132 LSL-DRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEA 191
               +++ FP L+KAA+   SL  G  +HG+A K   GSD FV   LI  Y +C  +  A
Sbjct: 129 QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSA 188

Query: 192 RLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARA 251
             VF  + ++DVV+W+ MI+G+   G  D A +LF++M+   ++   + +  +LSACA+ 
Sbjct: 189 CKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKI 248

Query: 252 GNLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMV 311
            NL+FG ++  +I +N + ++  L +A++ MY  CGS + A  L++ +  K+ V  T M+
Sbjct: 249 RNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTML 308

Query: 312 SGLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQ-QLGMK 354
            G A       AR V + M +KD++ W+A+IS Y ++  P EAL++F ++Q Q  MK
Sbjct: 309 DGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMK 362

BLAST of Cp4.1LG08g04190.1 vs. TAIR10
Match: AT3G15930.1 (AT3G15930.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 185.7 bits (470), Expect = 5.3e-47
Identity = 102/319 (31.97%), Postives = 175/319 (54.86%), Query Frame = 1

Query: 39  KQVHAQILRSKFERSDSDSLLFKLILSSCA-LSPSLDYALSVFDQIPEPKTRFCNKLLRE 98
           KQ+H+Q +      + + +   KL +  C+ L   + YA  +F +IPEP     N +++ 
Sbjct: 51  KQLHSQSITRGV--APNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKG 110

Query: 99  LSRGSEPENALFLYEKMRAEGLSLDRFCFPPLLKAASRNL-SLRTGMEIHGLASKLGFGS 158
            S+       + LY  M  EG++ D   FP LL    R+  +L  G ++H    K G GS
Sbjct: 111 WSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGS 170

Query: 159 DPFVETGLIRMYAACRRIMEARLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMK 218
           + +V+  L++MY+ C  +  AR VFD+  + DV +W++MI GY     Y+ + +L  EM+
Sbjct: 171 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 230

Query: 219 RTGLEPDEMILSTILSACARAGNLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTD 278
           R  + P  + L  +LSAC++  + D   ++HE++++        L++AL+  YA+CG  D
Sbjct: 231 RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMD 290

Query: 279 LAWDLYEKITPKNMVISTAMVSGLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDC 338
           +A  ++  +  ++++  T++V G  + G +  AR  FDQM  +D I W+ MI GY  + C
Sbjct: 291 IAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGC 350

Query: 339 PQEALVLFKKMQQLGMKPD 356
             E+L +F++MQ  GM PD
Sbjct: 351 FNESLEIFREMQSAGMIPD 367

BLAST of Cp4.1LG08g04190.1 vs. TAIR10
Match: AT2G22410.1 (AT2G22410.1 SLOW GROWTH 1)

HSP 1 Score: 181.0 bits (458), Expect = 1.3e-45
Identity = 105/339 (30.97%), Postives = 180/339 (53.10%), Query Frame = 1

Query: 25  LSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCALSPS--LDYALSVFDQ 84
           L + L     LLH+KQ+ AQ++ +       D      +++ CALS S  LDY++ +   
Sbjct: 56  LLSLLEKCKLLLHLKQIQAQMIINGLIL---DPFASSRLIAFCALSESRYLDYSVKILKG 115

Query: 85  IPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLSL---DRFCFPPLLKAASRNLSL 144
           I  P     N  +R  S    P+ +  LY++M   G      D F +P L K  +     
Sbjct: 116 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 175

Query: 145 RTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFDKMSQRDVVTWSIMIDGY 204
             G  I G   KL       V    I M+A+C  +  AR VFD+   RD+V+W+ +I+GY
Sbjct: 176 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 235

Query: 205 CISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKIHEFITKNNIVMDP 264
              G  + A  +++ M+  G++PD++ +  ++S+C+  G+L+ G + +E++ +N + M  
Sbjct: 236 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 295

Query: 265 HLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQIGDARCVFDQMVEK 324
            L +AL+ M++ CG    A  +++ +  + +V  T M+SG A+ G +  +R +FD M EK
Sbjct: 296 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 355

Query: 325 DLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
           D++ W+AMI G  ++   Q+AL LF++MQ    KPD ++
Sbjct: 356 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT 391

BLAST of Cp4.1LG08g04190.1 vs. TAIR10
Match: AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)

HSP 1 Score: 180.6 bits (457), Expect = 1.7e-45
Identity = 101/298 (33.89%), Postives = 169/298 (56.71%), Query Frame = 1

Query: 26  SAALSSATSLLHIKQVHAQILRSKFERSDSDSLLFKLILSSCALSPSLDYALSVFDQIPE 85
           ++ + SAT    +KQ+HA++L    + S    L+ KLI +S +    + +A  VFD +P 
Sbjct: 25  ASLIDSATHKAQLKQIHARLLVLGLQFSGF--LITKLIHASSSFG-DITFARQVFDDLPR 84

Query: 86  PKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLSLDRFCFPPLLKAASRNLSLRTGMEI 145
           P+    N ++R  SR +  ++AL +Y  M+   +S D F FP LLKA S    L+ G  +
Sbjct: 85  PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 144

Query: 146 HGLASKLGFGSDPFVETGLIRMYAACRRIMEARLVFD--KMSQRDVVTWSIMIDGYCISG 205
           H    +LGF +D FV+ GLI +YA CRR+  AR VF+   + +R +V+W+ ++  Y  +G
Sbjct: 145 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 204

Query: 206 YYDLAFQLFEEMKRTGLEPDEMILSTILSACARAGNLDFGTKIHEFITKNNIVMDPHLQS 265
               A ++F +M++  ++PD + L ++L+A     +L  G  IH  + K  + ++P L  
Sbjct: 205 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 264

Query: 266 ALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVSGLAKGGQIGDARCVFDQMVEKDL 322
           +L  MYA CG    A  L++K+   N+++  AM+SG AK G   +A  +F +M+ KD+
Sbjct: 265 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV 319

BLAST of Cp4.1LG08g04190.1 vs. NCBI nr
Match: gi|225432698|ref|XP_002278762.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Vitis vinifera])

HSP 1 Score: 476.5 bits (1225), Expect = 4.2e-131
Identity = 244/361 (67.59%), Postives = 288/361 (79.78%), Query Frame = 1

Query: 4   LSHTTSILPLHLPPYPTRPTALSA------ALSSATSLLHIKQVHAQILRSKFERSDSDS 63
           +S T   LP +  P P  PT L +      ALSSATSL H+KQVHAQILRSK +RS S  
Sbjct: 1   MSQTALALPPN--PNPATPTTLHSHHTLFSALSSATSLTHLKQVHAQILRSKLDRSTS-- 60

Query: 64  LLFKLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAE 123
           LL KL++SSCALS SLDYALSVF+ IP+P+T  CN+ LRELSR  EPE  L +YE+MR +
Sbjct: 61  LLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQ 120

Query: 124 GLSLDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEA 183
           GL++DRF FPPLLKA SR  SL  G+EIHGLA+KLGF SDPFV+TGL+RMYAAC RI EA
Sbjct: 121 GLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEA 180

Query: 184 RLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARA 243
           RL+FDKM  RDVVTWSIMIDGYC SG ++ A  LFEEMK   +EPDEM+LST+LSAC RA
Sbjct: 181 RLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRA 240

Query: 244 GNLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMV 303
           GNL +G  IH+FI +NNIV+DPHLQSAL+ MYASCGS DLA +L+EK+TPKN+V STAMV
Sbjct: 241 GNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMV 300

Query: 304 SGLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIV 359
           +G +K GQI +AR VF+QMV+KDL+CWSAMISGY ESD PQEAL LF +MQ LG+KPD V
Sbjct: 301 TGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQV 357

BLAST of Cp4.1LG08g04190.1 vs. NCBI nr
Match: gi|1009141445|ref|XP_015888199.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Ziziphus jujuba])

HSP 1 Score: 466.8 bits (1200), Expect = 3.4e-128
Identity = 238/361 (65.93%), Postives = 283/361 (78.39%), Query Frame = 1

Query: 1   METLSHTTSILPLH--LPPYPTRPTALSAALSSATSLLHIKQVHAQILRSKFERSDSDSL 60
           M  L+ TT  LP +    P     + L  ALS++T++  +KQVHAQILRSK +RS+   L
Sbjct: 1   MSALAQTTLALPPNPSFTPNSAAYSTLFTALSTSTTITQLKQVHAQILRSKLDRSNP--L 60

Query: 61  LFKLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEG 120
           L KL+LSSC LSPSLDYALSVF+QI  P T+FCNK LRELSR +EP  AL +Y KMR+EG
Sbjct: 61  LIKLVLSSCVLSPSLDYALSVFNQISNPPTQFCNKFLRELSRRAEPSKALLVYGKMRSEG 120

Query: 121 LS-LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEA 180
           L  +DRF FPP+LKA SR  +L  GMEIHG+ASKLGF  DPFV+TGL+RMYAAC RIMEA
Sbjct: 121 LGGVDRFSFPPILKAVSRAEALTEGMEIHGVASKLGFDKDPFVQTGLVRMYAACGRIMEA 180

Query: 181 RLVFDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLEPDEMILSTILSACARA 240
           RL+FDKMS RDVVTWSIMIDGYC SG +D  F LFEEMK + +EPD MILST+LSAC RA
Sbjct: 181 RLMFDKMSHRDVVTWSIMIDGYCQSGLFDYVFHLFEEMKSSSVEPDGMILSTVLSACGRA 240

Query: 241 GNLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMV 300
           GNL +G  IH+FIT+NN+V+D HL SAL+ MYASCGS DLA   Y K++PK++V STAMV
Sbjct: 241 GNLGYGRAIHDFITENNVVLDSHLNSALVAMYASCGSMDLARQFYNKMSPKSLVASTAMV 300

Query: 301 SGLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIV 359
           SG +K GQI DAR +F+Q+VEKDLICWSAMISGY ESD PQEAL LF +MQ LG++PD V
Sbjct: 301 SGYSKLGQIEDARLIFNQLVEKDLICWSAMISGYAESDLPQEALRLFNEMQVLGIRPDQV 359

BLAST of Cp4.1LG08g04190.1 vs. NCBI nr
Match: gi|694437735|ref|XP_009345879.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like [Pyrus x bretschneideri])

HSP 1 Score: 459.1 bits (1180), Expect = 7.0e-126
Identity = 230/360 (63.89%), Postives = 280/360 (77.78%), Query Frame = 1

Query: 1   METLSHTTSILPLHLPPYPTRPTALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
           M +L HTT  LP H  PYP  P  LS A+SSA SL H+KQVHAQIL+S  +R DS  LL+
Sbjct: 1   MSSLPHTTLALPPHPNPYPNTPATLSTAVSSARSLTHLKQVHAQILKSNLDRPDS--LLY 60

Query: 61  KLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLS 120
            L+LSSC LSPSL Y LS+F+QIP+P+   CNKLLRE SR +EP+ AL +YE+MR E + 
Sbjct: 61  NLLLSSCTLSPSLHYPLSIFNQIPKPQIHMCNKLLREFSRCAEPDKALLVYERMRREDVG 120

Query: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
           +DRF  PPLLKA +R  +L  GMEIHG+A KLGF SDPFVETGL+RMYAAC RIM+ARLV
Sbjct: 121 VDRFSIPPLLKAVARASALSEGMEIHGVAWKLGFHSDPFVETGLVRMYAACGRIMDARLV 180

Query: 181 FDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLE--PDEMILSTILSACARAG 240
           FDKMS+RDVV WSIMI+GYC SG++D AF+LFEEMK +  E  PDEMILS ILSAC  AG
Sbjct: 181 FDKMSRRDVVAWSIMINGYCQSGHFDTAFRLFEEMKNSNAEPDPDEMILSAILSACGHAG 240

Query: 241 NLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVS 300
            L +G  IH+FI +N+IV+D HL+SALI MYA  GS DLA  L++K + KN V++TAMVS
Sbjct: 241 KLAYGKAIHDFIMENDIVVDSHLRSALIAMYAGSGSMDLAQQLFDKTSQKNFVVATAMVS 300

Query: 301 GLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
           G +K G++ DAR +FDQ+VEKDL+CWSAMISGY ESD PQEAL LF +M+  G++PD V+
Sbjct: 301 GYSKLGRVEDARLIFDQIVEKDLVCWSAMISGYAESDRPQEALRLFAEMEASGLRPDPVT 358

BLAST of Cp4.1LG08g04190.1 vs. NCBI nr
Match: gi|694388278|ref|XP_009369855.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like [Pyrus x bretschneideri])

HSP 1 Score: 457.2 bits (1175), Expect = 2.7e-125
Identity = 230/360 (63.89%), Postives = 279/360 (77.50%), Query Frame = 1

Query: 1   METLSHTTSILPLHLPPYPTRPTALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
           M +L HTT  LP H  PYP  P  LS A+SSA SL H+KQVHAQIL+S  +R DS  LLF
Sbjct: 1   MSSLPHTTLALPPHPNPYPNTPATLSTAVSSARSLTHLKQVHAQILKSNLDRPDS--LLF 60

Query: 61  KLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLS 120
            L+LSSC LSPSL Y LS+F+QIP+P+   CNKLLRE SR +EP+ AL +YE+MR E + 
Sbjct: 61  NLLLSSCTLSPSLHYPLSIFNQIPKPQIHLCNKLLREFSRCAEPDKALLVYERMRREDVG 120

Query: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
           +DRF  PPLLKA +R  +L  GMEIHG+A KLGF SDPFVETGL+RMYAA  RIM+ARL+
Sbjct: 121 VDRFSIPPLLKAVARASALSEGMEIHGVAWKLGFDSDPFVETGLVRMYAASGRIMDARLM 180

Query: 181 FDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLE--PDEMILSTILSACARAG 240
           FDKMS+RDVV WSIMI+GYC SG++D AF+LFEEMK +  E  PDEMILS ILSAC  AG
Sbjct: 181 FDKMSRRDVVAWSIMINGYCQSGHFDTAFRLFEEMKNSNAEPDPDEMILSAILSACGHAG 240

Query: 241 NLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVS 300
            L +G  IH+FI +N+IV+D HLQSALI MYA  GS DLA  L++K + KN V++TAMVS
Sbjct: 241 KLAYGKAIHDFIMENDIVVDSHLQSALIAMYAGSGSMDLAQQLFDKTSQKNFVVATAMVS 300

Query: 301 GLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
           G +K G++ DAR +FDQ+VEKDL+CWSAMISGY ESD PQEAL LF +M+  G++PD V+
Sbjct: 301 GYSKLGRVEDARLIFDQIVEKDLVCWSAMISGYAESDQPQEALRLFAEMEASGLRPDPVT 358

BLAST of Cp4.1LG08g04190.1 vs. NCBI nr
Match: gi|658011498|ref|XP_008340993.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Malus domestica])

HSP 1 Score: 451.8 bits (1161), Expect = 1.1e-123
Identity = 227/360 (63.06%), Postives = 277/360 (76.94%), Query Frame = 1

Query: 1   METLSHTTSILPLHLPPYPTRPTALSAALSSATSLLHIKQVHAQILRSKFERSDSDSLLF 60
           M +L HTT  LP H  PYP  P  LS A+S A SL H++QVHAQIL+S  +R D  SLLF
Sbjct: 1   MSSLPHTTLALPPHPNPYPNTPATLSTAVSXARSLTHLRQVHAQILKSNLDRPD--SLLF 60

Query: 61  KLILSSCALSPSLDYALSVFDQIPEPKTRFCNKLLRELSRGSEPENALFLYEKMRAEGLS 120
            L+LSSC LSPSL Y LS+F+QI +P+   CNKLLRE SR +EP+ AL +YE+MR E + 
Sbjct: 61  NLLLSSCTLSPSLHYPLSIFNQIXKPQIHLCNKLLREFSRRAEPDKALLVYERMRREDVG 120

Query: 121 LDRFCFPPLLKAASRNLSLRTGMEIHGLASKLGFGSDPFVETGLIRMYAACRRIMEARLV 180
           +DRF  PPLLKA +R  +L  GMEIH +A KLGF SDPFVETGL+RMYAAC RIM+ARLV
Sbjct: 121 VDRFSIPPLLKAVARASALSEGMEIHXVAWKLGFHSDPFVETGLVRMYAACGRIMDARLV 180

Query: 181 FDKMSQRDVVTWSIMIDGYCISGYYDLAFQLFEEMKRTGLE--PDEMILSTILSACARAG 240
           FDKMS+RDVV WSIMI+GYC SG++D AF+LFEEMK +  E  PDEMILS ILSAC  AG
Sbjct: 181 FDKMSRRDVVAWSIMINGYCQSGHFDTAFRLFEEMKNSNAEPDPDEMILSAILSACGHAG 240

Query: 241 NLDFGTKIHEFITKNNIVMDPHLQSALIKMYASCGSTDLAWDLYEKITPKNMVISTAMVS 300
            L +G  IH+FI +N+IV+D HL+SALI MYA  GS DLA  L++K + KN V++TAMVS
Sbjct: 241 KLAYGKAIHDFIMENDIVVDSHLRSALIAMYAGSGSMDLAQQLFDKTSQKNFVVATAMVS 300

Query: 301 GLAKGGQIGDARCVFDQMVEKDLICWSAMISGYTESDCPQEALVLFKKMQQLGMKPDIVS 359
           G +K G++ DAR +FDQ+VEKDL+CWSAMISGY ESD PQEAL LF +M+  G++PD V+
Sbjct: 301 GYSKLGRVEDARLIFDQIVEKDLVCWSAMISGYAESDRPQEALRLFAEMEASGLRPDPVT 358

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP311_ARATH3.8e-8749.71Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN... [more]
PP175_ARATH2.8e-5034.45Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
PP235_ARATH9.4e-4631.97Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis th... [more]
PP169_ARATH2.3e-4430.97Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... [more]
PP224_ARATH3.0e-4433.89Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
D7T700_VITVI3.0e-13167.59Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g03630 PE=4 SV=... [more]
W9R134_9ROSA3.9e-11559.72Uncharacterized protein OS=Morus notabilis GN=L484_005425 PE=4 SV=1[more]
V4S8H9_9ROSI2.2e-11058.09Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004433mg PE=4 SV=1[more]
A0A067GGS0_CITSI3.8e-11057.80Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004938mg PE=4 SV=1[more]
A0A067L6S3_JATCU9.3e-10957.51Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02188 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G14820.12.1e-8849.71 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G29760.11.6e-5134.45 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G15930.15.3e-4731.97 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G22410.11.3e-4530.97 SLOW GROWTH 1[more]
AT3G12770.11.7e-4533.89 mitochondrial editing factor 22[more]
Match NameE-valueIdentityDescription
gi|225432698|ref|XP_002278762.1|4.2e-13167.59PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Vitis vinifera... [more]
gi|1009141445|ref|XP_015888199.1|3.4e-12865.93PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Ziziphus jujub... [more]
gi|694437735|ref|XP_009345879.1|7.0e-12663.89PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like [Pyrus x b... [more]
gi|694388278|ref|XP_009369855.1|2.7e-12563.89PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like [Pyrus x b... [more]
gi|658011498|ref|XP_008340993.1|1.1e-12363.06PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Malus domestic... [more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cp4.1LG08g04190Cp4.1LG08g04190gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG08g04190.1:cds:003Cp4.1LG08g04190.1:cds:003CDS
Cp4.1LG08g04190.1:cds:002Cp4.1LG08g04190.1:cds:002CDS
Cp4.1LG08g04190.1:cds:001Cp4.1LG08g04190.1:cds:001CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cp4.1LG08g04190.1Cp4.1LG08g04190.1-proteinpolypeptide


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 263..285
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 319..363
score: 1.8E-8coord: 188..236
score: 5.7
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 294..321
score: 3.7E-5coord: 190..224
score: 1.3E-10coord: 322..356
score: 3.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 223..257
score: 7.728coord: 188..222
score: 14.25coord: 56..86
score: 5.415coord: 87..121
score: 8.111coord: 289..319
score: 8.429coord: 320..354
score: 11.444coord: 157..187
score: 7.256coord: 258..288
score: 6
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 11..357
score: 8.2E
NoneNo IPR availablePANTHERPTHR24015:SF581SUBFAMILY NOT NAMEDcoord: 11..357
score: 8.2E