Carg10953 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGAATCGCAGAGACGACCCTCCGGCACCGCCGCCCGGAAGCAGCAGCCAAGCCGCCTGCAGCGCCGGGCTCCAGCCTCCCTCCAAATCAGCCGCTCCGATTGGAAGGTCGCCATCCCTCTCCTATCGCCACTCGTATCGCCATCGTCGCCGACAGAGATCCAAAATTGGACCGCCGATTCAGGATCGATTTCTTCTTCTTCTTCTCATCATCATCATCATCATCATCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCAGTTTTTAAGAAATGGCAGCATCCGGCGGCGCCGTTTCATTACGATTCGGGTTCTAGGGCTCCCAGAGCATTCGTACCCGTTTAG ATGGCCGAATCGCAGAGACGACCCTCCGGCACCGCCGCCCGGAAGCAGCAGCCAAGCCGCCTGCAGCGCCGGGCTCCAGCCTCCCTCCAAATCAGCCGCTCCGATTGGAAGGTCGCCATCCCTCTCCTATCGCCACTCGTATCGCCATCGTCGCCGACAGAGATCCAAAATTGGACCGCCGATTCAGGATCGATTTCTTCTTCTTCTTCTCATCATCATCATCATCATCATCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCAGTTTTTAAGAAATGGCAGCATCCGGCGGCGCCGTTTCATTACGATTCGGGTTCTAGGGCTCCCAGAGCATTCGTACCCGTTTAG ATGGCCGAATCGCAGAGACGACCCTCCGGCACCGCCGCCCGGAAGCAGCAGCCAAGCCGCCTGCAGCGCCGGGCTCCAGCCTCCCTCCAAATCAGCCGCTCCGATTGGAAGGTCGCCATCCCTCTCCTATCGCCACTCGTATCGCCATCGTCGCCGACAGAGATCCAAAATTGGACCGCCGATTCAGGATCGATTTCTTCTTCTTCTTCTCATCATCATCATCATCATCATCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCAGTTTTTAAGAAATGGCAGCATCCGGCGGCGCCGTTTCATTACGATTCGGGTTCTAGGGCTCCCAGAGCATTCGTACCCGTTTAG MAESQRRPSGTAARKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQNWTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV
BLAST of Carg10953 vs. NCBI nr
Match: XP_022930471.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 169.9 bits (429), Expect = 5.2e-39 Identity = 113/116 (97.41%), Postives = 113/116 (97.41%), Query Frame = 0
BLAST of Carg10953 vs. NCBI nr
Match: XP_023515028.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 165.2 bits (417), Expect = 1.3e-37 Identity = 109/116 (93.97%), Postives = 111/116 (95.69%), Query Frame = 0
BLAST of Carg10953 vs. NCBI nr
Match: XP_023000559.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 164.9 bits (416), Expect = 1.7e-37 Identity = 113/116 (97.41%), Postives = 113/116 (97.41%), Query Frame = 0
BLAST of Carg10953 vs. NCBI nr
Match: XP_022138670.1 (uncharacterized protein At4g14450, chloroplastic-like [Momordica charantia]) HSP 1 Score: 125.6 bits (314), Expect = 1.1e-25 Identity = 76/117 (64.96%), Postives = 80/117 (68.38%), Query Frame = 0
BLAST of Carg10953 vs. NCBI nr
Match: XP_008460625.2 (PREDICTED: uncharacterized protein At4g14450, chloroplastic-like [Cucumis melo]) HSP 1 Score: 125.2 bits (313), Expect = 1.5e-25 Identity = 97/128 (75.78%), Postives = 100/128 (78.12%), Query Frame = 0
BLAST of Carg10953 vs. TAIR10
Match: AT1G04330.1 (unknown protein) HSP 1 Score: 58.9 bits (141), Expect = 2.4e-09 Identity = 45/121 (37.19%), Postives = 57/121 (47.11%), Query Frame = 0
BLAST of Carg10953 vs. TAIR10
Match: AT3G23170.1 (unknown protein) HSP 1 Score: 54.7 bits (130), Expect = 4.5e-08 Identity = 43/113 (38.05%), Postives = 54/113 (47.79%), Query Frame = 0
BLAST of Carg10953 vs. TAIR10
Match: AT4G14450.1 (unknown protein) HSP 1 Score: 52.4 bits (124), Expect = 2.2e-07 Identity = 43/113 (38.05%), Postives = 54/113 (47.79%), Query Frame = 0
BLAST of Carg10953 vs. Swiss-Prot
Match: sp|Q6NN02|Y4445_ARATH (Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g14450 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 4.0e-06 Identity = 43/113 (38.05%), Postives = 54/113 (47.79%), Query Frame = 0
BLAST of Carg10953 vs. TrEMBL
Match: tr|A0A1S3CDB1|A0A1S3CDB1_CUCME (uncharacterized protein At4g14450, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103499403 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 9.8e-26 Identity = 97/128 (75.78%), Postives = 100/128 (78.12%), Query Frame = 0
BLAST of Carg10953 vs. TrEMBL
Match: tr|A0A0A0LLJ8|A0A0A0LLJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190740 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.8e-19 Identity = 89/123 (72.36%), Postives = 95/123 (77.24%), Query Frame = 0
BLAST of Carg10953 vs. TrEMBL
Match: tr|A0A1Q3CQ66|A0A1Q3CQ66_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_25829 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.0e-11 Identity = 58/118 (49.15%), Postives = 65/118 (55.08%), Query Frame = 0
BLAST of Carg10953 vs. TrEMBL
Match: tr|A0A2I4GEJ1|A0A2I4GEJ1_9ROSI (uncharacterized protein At4g14450, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC109007194 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.4e-11 Identity = 58/120 (48.33%), Postives = 66/120 (55.00%), Query Frame = 0
BLAST of Carg10953 vs. TrEMBL
Match: tr|A0A2N9IRN2|A0A2N9IRN2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54732 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.3e-11 Identity = 56/119 (47.06%), Postives = 59/119 (49.58%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |