Carg10077 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGATTCACACAGACGAACCTCCACTCCCGCCGGTGCCTCTCGCCGCCATCCGCCGCCGCCGCAGCAGCCAGCCTGCTTTCGGAGCCGGGCGCCAGCGTCCCTGCAAATCAACCGCCCCGATTGGAAGGTCGCCATCCCTCTCTTGACCCCGCTCGTCTCCCCATCCTCACCCAAAGAGATACAAACTTGGGCGTCTAATTCCGGCGAAGGATCCTCCAATTCTTCAAATCATAAAGAATCGGAGCCGGAGAAGCCGCCGGTTTTTAAGAAATGGCAGCATCCGGCGGCCCCTTTTCAGTACGATTCCGGCCCTATGGATCCCAGATTCATCCCTGCTTAG ATGGCTGATTCACACAGACGAACCTCCACTCCCGCCGGTGCCTCTCGCCGCCATCCGCCGCCGCCGCAGCAGCCAGCCTGCTTTCGGAGCCGGGCGCCAGCGTCCCTGCAAATCAACCGCCCCGATTGGAAGGTCGCCATCCCTCTCTTGACCCCGCTCGTCTCCCCATCCTCACCCAAAGAGATACAAACTTGGGCGTCTAATTCCGGCGAAGGATCCTCCAATTCTTCAAATCATAAAGAATCGGAGCCGGAGAAGCCGCCGGTTTTTAAGAAATGGCAGCATCCGGCGGCCCCTTTTCAGTACGATTCCGGCCCTATGGATCCCAGATTCATCCCTGCTTAG ATGGCTGATTCACACAGACGAACCTCCACTCCCGCCGGTGCCTCTCGCCGCCATCCGCCGCCGCCGCAGCAGCCAGCCTGCTTTCGGAGCCGGGCGCCAGCGTCCCTGCAAATCAACCGCCCCGATTGGAAGGTCGCCATCCCTCTCTTGACCCCGCTCGTCTCCCCATCCTCACCCAAAGAGATACAAACTTGGGCGTCTAATTCCGGCGAAGGATCCTCCAATTCTTCAAATCATAAAGAATCGGAGCCGGAGAAGCCGCCGGTTTTTAAGAAATGGCAGCATCCGGCGGCCCCTTTTCAGTACGATTCCGGCCCTATGGATCCCAGATTCATCCCTGCTTAG MADSHRRTSTPAGASRRHPPPPQQPACFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPKEIQTWASNSGEGSSNSSNHKESEPEKPPVFKKWQHPAAPFQYDSGPMDPRFIPA
BLAST of Carg10077 vs. NCBI nr
Match: XP_022958791.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 207.2 bits (526), Expect = 2.9e-50 Identity = 101/114 (88.60%), Postives = 101/114 (88.60%), Query Frame = 0
BLAST of Carg10077 vs. NCBI nr
Match: XP_023006762.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 201.4 bits (511), Expect = 1.6e-48 Identity = 98/114 (85.96%), Postives = 99/114 (86.84%), Query Frame = 0
BLAST of Carg10077 vs. NCBI nr
Match: XP_023548297.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 190.7 bits (483), Expect = 2.8e-45 Identity = 104/114 (91.23%), Postives = 105/114 (92.11%), Query Frame = 0
BLAST of Carg10077 vs. NCBI nr
Match: XP_022138670.1 (uncharacterized protein At4g14450, chloroplastic-like [Momordica charantia]) HSP 1 Score: 114.0 bits (284), Expect = 3.3e-22 Identity = 68/115 (59.13%), Postives = 77/115 (66.96%), Query Frame = 0
BLAST of Carg10077 vs. NCBI nr
Match: XP_008460625.2 (PREDICTED: uncharacterized protein At4g14450, chloroplastic-like [Cucumis melo]) HSP 1 Score: 111.7 bits (278), Expect = 1.7e-21 Identity = 66/132 (50.00%), Postives = 72/132 (54.55%), Query Frame = 0
BLAST of Carg10077 vs. TAIR10
Match: AT1G04330.1 (unknown protein) HSP 1 Score: 64.3 bits (155), Expect = 5.5e-11 Identity = 39/84 (46.43%), Postives = 43/84 (51.19%), Query Frame = 0
BLAST of Carg10077 vs. TAIR10
Match: AT3G23170.1 (unknown protein) HSP 1 Score: 55.1 bits (131), Expect = 3.3e-08 Identity = 34/74 (45.95%), Postives = 41/74 (55.41%), Query Frame = 0
BLAST of Carg10077 vs. TAIR10
Match: AT4G14450.1 (unknown protein) HSP 1 Score: 50.4 bits (119), Expect = 8.2e-07 Identity = 40/112 (35.71%), Postives = 52/112 (46.43%), Query Frame = 0
BLAST of Carg10077 vs. Swiss-Prot
Match: sp|Q6NN02|Y4445_ARATH (Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g14450 PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.5e-05 Identity = 40/112 (35.71%), Postives = 52/112 (46.43%), Query Frame = 0
BLAST of Carg10077 vs. TrEMBL
Match: tr|A0A1S3CDB1|A0A1S3CDB1_CUCME (uncharacterized protein At4g14450, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103499403 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21 Identity = 66/132 (50.00%), Postives = 72/132 (54.55%), Query Frame = 0
BLAST of Carg10077 vs. TrEMBL
Match: tr|A0A0A0LLJ8|A0A0A0LLJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190740 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 3.9e-19 Identity = 63/128 (49.22%), Postives = 71/128 (55.47%), Query Frame = 0
BLAST of Carg10077 vs. TrEMBL
Match: tr|A0A2K3M003|A0A2K3M003_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g040164 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 7.9e-12 Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 0
BLAST of Carg10077 vs. TrEMBL
Match: tr|A0A1S4AEQ9|A0A1S4AEQ9_TOBAC (uncharacterized protein At4g14450, chloroplastic-like OS=Nicotiana tabacum OX=4097 GN=LOC107796858 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.3e-11 Identity = 50/113 (44.25%), Postives = 70/113 (61.95%), Query Frame = 0
BLAST of Carg10077 vs. TrEMBL
Match: tr|A0A1U7XUL9|A0A1U7XUL9_NICSY (uncharacterized protein At4g14450, chloroplastic-like OS=Nicotiana sylvestris OX=4096 GN=LOC104241393 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.3e-11 Identity = 50/113 (44.25%), Postives = 70/113 (61.95%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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