Carg10239 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg10239
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ethylene-responsive transcription factor
Location	Cucurbita_argyrosperma_scaffold_047 : 33353 .. 33748 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCTGCGTTAGCTCAAGTGATAACGAGTGGGAGTGGGAGTAGCAGAAGCCCAGTAGAAGCAGATTACTGGCCGCAATCGCAGCAAGCAGCAGCAGATGAAGAACAAGGTGGTGGAAGCAGGACGGGGATGGTGTCAAGAGAGAGGCATTATCGAGGAGTAAGGCAGAGACCGTGGGGAAAATGGGCAGCTGAGATTCGTGATCCGAAAAAGGCAGCAAGAGTGTGGCTGGGCACCTTCGACACTGCTGAGGCTGCCGCACTTGCTTACGATGAAGCTGCCCTCAGATTCAAAGGCACCAAAGCCAAGCTCAACTTCCCTGAGAGACTCACTACCCCATGCCCTCCGCCCCCCTATGCCTATCATCACCATCACAATAACCACAACCTATAG

mRNA sequence

ATGGTTTCTGCGTTAGCTCAAGTGATAACGAGTGGGAGTGGGAGTAGCAGAAGCCCAGTAGAAGCAGATTACTGGCCGCAATCGCAGCAAGCAGCAGCAGATGAAGAACAAGGTGGTGGAAGCAGGACGGGGATGGTGTCAAGAGAGAGGCATTATCGAGGAGTAAGGCAGAGACCGTGGGGAAAATGGGCAGCTGAGATTCGTGATCCGAAAAAGGCAGCAAGAGTGTGGCTGGGCACCTTCGACACTGCTGAGGCTGCCGCACTTGCTTACGATGAAGCTGCCCTCAGATTCAAAGGCACCAAAGCCAAGCTCAACTTCCCTGAGAGACTCACTACCCCATGCCCTCCGCCCCCCTATGCCTATCATCACCATCACAATAACCACAACCTATAG

Coding sequence (CDS)

ATGGTTTCTGCGTTAGCTCAAGTGATAACGAGTGGGAGTGGGAGTAGCAGAAGCCCAGTAGAAGCAGATTACTGGCCGCAATCGCAGCAAGCAGCAGCAGATGAAGAACAAGGTGGTGGAAGCAGGACGGGGATGGTGTCAAGAGAGAGGCATTATCGAGGAGTAAGGCAGAGACCGTGGGGAAAATGGGCAGCTGAGATTCGTGATCCGAAAAAGGCAGCAAGAGTGTGGCTGGGCACCTTCGACACTGCTGAGGCTGCCGCACTTGCTTACGATGAAGCTGCCCTCAGATTCAAAGGCACCAAAGCCAAGCTCAACTTCCCTGAGAGACTCACTACCCCATGCCCTCCGCCCCCCTATGCCTATCATCACCATCACAATAACCACAACCTATAG

Protein sequence

MVSALAQVITSGSGSSRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPCPPPPYAYHHHHNNHNL

Homology

[Close]

BLAST of Carg10239 vs. NCBI nr
Match: XP_022921378.1 (ethylene-responsive transcription factor ERF114-like, partial [Cucurbita moschata])

HSP 1 Score: 226.9 bits (577), Expect = 4.1e-56
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MVSALAQVITSGSGSSRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQRPW 60
           MVSALAQVITSGSGSSRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQRPW
Sbjct: 44  MVSALAQVITSGSGSSRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQRPW 103

Query: 61  GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 115
           GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP
Sbjct: 104 GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 157

[Close]

BLAST of Carg10239 vs. NCBI nr
Match: XP_023516838.1 (ethylene-responsive transcription factor ERF115-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 220.3 bits (560), Expect = 3.8e-54
Identity = 113/116 (97.41%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MVSALAQVIT--SGSGSSRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQR 60
           MVSALAQVIT  SGSGSSRSPVEADYWPQSQQAAADE+QGGGSRTGMVSRERHYRGVRQR
Sbjct: 1   MVSALAQVITSGSGSGSSRSPVEADYWPQSQQAAADEKQGGGSRTGMVSRERHYRGVRQR 60

Query: 61  PWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 115
           PWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP
Sbjct: 61  PWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 116

[Close]

BLAST of Carg10239 vs. NCBI nr
Match: XP_022987260.1 (ethylene-responsive transcription factor ERF115-like [Cucurbita maxima])

HSP 1 Score: 219.2 bits (557), Expect = 8.5e-54
Identity = 113/116 (97.41%), Postives = 113/116 (97.41%), Query Frame = 0


Query: 1   MVSALAQVIT--SGSGSSRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQR 60
           MVSALAQVIT  SGSGSSRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQR
Sbjct: 1   MVSALAQVITSGSGSGSSRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQR 60

Query: 61  PWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 115
           PWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAA RFKGTKAKLNFPERLTTP
Sbjct: 61  PWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAAHRFKGTKAKLNFPERLTTP 116

[Close]

BLAST of Carg10239 vs. NCBI nr
Match: XP_004138017.1 (PREDICTED: ethylene-responsive transcription factor ERF115 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 4.1e-32
Identity = 80/114 (70.18%), Postives = 84/114 (73.68%), Query Frame = 0


Query: 1   MVSALAQVITSGSGSSRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQRPW 60
           MVSAL QVITSG              +   A+A     G +  G+    RHYRGVRQRPW
Sbjct: 1   MVSALTQVITSGXXXXXXXXXXXXXVEEPAASA----RGDNEEGVKRESRHYRGVRQRPW 60

Query: 61  GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 115
           GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP
Sbjct: 61  GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 110

[Close]

BLAST of Carg10239 vs. NCBI nr
Match: XP_008464362.1 (PREDICTED: ethylene-responsive transcription factor ERF115 [Cucumis melo] >ADN33855.1 AP2 domain transcription factor RAP2.3 [Cucumis melo subsp. melo])

HSP 1 Score: 144.8 bits (364), Expect = 2.0e-31
Identity = 79/114 (69.30%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 1   MVSALAQVITSGSGSSRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQRPW 60
           MVSAL QVITSG              +   A+      G +  G+    RHYRGVRQRPW
Sbjct: 1   MVSALTQVITSGXXXXXXXXXXXXVVEEPAASV----RGDNEEGVKRESRHYRGVRQRPW 60

Query: 61  GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 115
           GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP
Sbjct: 61  GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 110

[Close]

BLAST of Carg10239 vs. TAIR10
Match: AT5G61890.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 129.0 bits (323), Expect = 2.1e-30
Identity = 75/121 (61.98%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 1   MVSALAQVI---TSGSGSSRSPVEADY-------WPQSQQAAADEEQGGGSRTGMVSRER 60
           MVSAL QVI    S S  + S ++ +Y        P  Q A   ++QG         R R
Sbjct: 36  MVSALTQVIGNQQSKSHDNISSIDDNYPSVYNPQDPNQQVAPTHQDQGD-------LRRR 95

Query: 61  HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPER 112
           HYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAE+AALAYDEAAL+FKG+KAKLNFPER
Sbjct: 96  HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPER 149

[Close]

BLAST of Carg10239 vs. TAIR10
Match: AT5G07310.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 128.6 bits (322), Expect = 2.7e-30
Identity = 72/114 (63.16%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 1   MVSALAQVITSGSGS----SRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVR 60
           MVSAL QVI + S S       PV  +    +  A   ++QG       + R+RHYRGVR
Sbjct: 44  MVSALTQVIGNQSSSHDNNQHQPVVYNQQDPNPPAPPTQDQG-------LLRKRHYRGVR 103

Query: 61  QRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPER 111
           QRPWGKWAAEIRDP+KAARVWLGTF+TAEAAALAYD AAL+FKG+KAKLNFPER
Sbjct: 104 QRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPER 150

[Close]

BLAST of Carg10239 vs. TAIR10
Match: AT5G13330.1 (related to AP2 6l)

HSP 1 Score: 127.9 bits (320), Expect = 4.7e-30
Identity = 72/114 (63.16%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 1   MVSALAQVITSGSGSSRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQRPW 60
           MVSAL++VI      +  PV+ +   +S Q   D++Q          R RHYRGVRQRPW
Sbjct: 1   MVSALSRVI---ENPTDPPVKQEL-DKSDQHQPDQDQ---------PRRRHYRGVRQRPW 60

Query: 61  GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 115
           GKWAAEIRDPKKAARVWLGTF+TAE AALAYD AAL+FKGTKAKLNFPER+  P
Sbjct: 61  GKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGP 101

[Close]

BLAST of Carg10239 vs. TAIR10
Match: AT2G33710.2 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.1e-26
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 47  SRERHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLN 106
           SR+R+YRGVRQRPWGKWAAEIRDP KAARVWLGTFDTAE AALAYD+AA  F+G KAKLN
Sbjct: 65  SRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLN 124

Query: 107 FPERL 112
           FPE +
Sbjct: 125 FPEHI 129

[Close]

BLAST of Carg10239 vs. TAIR10
Match: AT5G50080.1 (ethylene response factor 110)

HSP 1 Score: 114.0 bits (284), Expect = 7.0e-26
Identity = 62/95 (65.26%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 15  SSRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQRPWGKWAAEIRDPKKAA 74
           SS +P+E     +S   A  EE           ++R YRGVRQRPWGKWAAEIRDP +AA
Sbjct: 53  SSHNPIE-----ESMSKAFPEEAR--------EKKRRYRGVRQRPWGKWAAEIRDPHRAA 112

Query: 75  RVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPE 110
           RVWLGTFDTAEAAA AYDEAALRF+G KAKLNFPE
Sbjct: 113 RVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPE 134

[Close]

BLAST of Carg10239 vs. Swiss-Prot
Match: sp|Q9FH54|EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 GN=ERF114 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-29
Identity = 75/121 (61.98%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 1   MVSALAQVI---TSGSGSSRSPVEADY-------WPQSQQAAADEEQGGGSRTGMVSRER 60
           MVSAL QVI    S S  + S ++ +Y        P  Q A   ++QG         R R
Sbjct: 36  MVSALTQVIGNQQSKSHDNISSIDDNYPSVYNPQDPNQQVAPTHQDQGD-------LRRR 95

Query: 61  HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPER 112
           HYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAE+AALAYDEAAL+FKG+KAKLNFPER
Sbjct: 96  HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPER 149

[Close]

BLAST of Carg10239 vs. Swiss-Prot
Match: sp|Q9LY29|EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 GN=ERF115 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.9e-29
Identity = 72/114 (63.16%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 1   MVSALAQVITSGSGS----SRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVR 60
           MVSAL QVI + S S       PV  +    +  A   ++QG       + R+RHYRGVR
Sbjct: 44  MVSALTQVIGNQSSSHDNNQHQPVVYNQQDPNPPAPPTQDQG-------LLRKRHYRGVR 103

Query: 61  QRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPER 111
           QRPWGKWAAEIRDP+KAARVWLGTF+TAEAAALAYD AAL+FKG+KAKLNFPER
Sbjct: 104 QRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPER 150

[Close]

BLAST of Carg10239 vs. Swiss-Prot
Match: sp|Q9LYU3|EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 GN=ERF113 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 8.4e-29
Identity = 72/114 (63.16%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 1   MVSALAQVITSGSGSSRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQRPW 60
           MVSAL++VI      +  PV+ +   +S Q   D++Q          R RHYRGVRQRPW
Sbjct: 1   MVSALSRVI---ENPTDPPVKQEL-DKSDQHQPDQDQ---------PRRRHYRGVRQRPW 60

Query: 61  GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 115
           GKWAAEIRDPKKAARVWLGTF+TAE AALAYD AAL+FKGTKAKLNFPER+  P
Sbjct: 61  GKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGP 101

[Close]

BLAST of Carg10239 vs. Swiss-Prot
Match: sp|P93007|EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 GN=ERF112 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.9e-25
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 47  SRERHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLN 106
           SR+R+YRGVRQRPWGKWAAEIRDP KAARVWLGTFDTAE AALAYD+AA  F+G KAKLN
Sbjct: 65  SRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLN 124

Query: 107 FPERL 112
           FPE +
Sbjct: 125 FPEHI 129

[Close]

BLAST of Carg10239 vs. Swiss-Prot
Match: sp|Q70II3|EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 1.3e-24
Identity = 62/95 (65.26%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 15  SSRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQRPWGKWAAEIRDPKKAA 74
           SS +P+E     +S   A  EE           ++R YRGVRQRPWGKWAAEIRDP +AA
Sbjct: 53  SSHNPIE-----ESMSKAFPEEAR--------EKKRRYRGVRQRPWGKWAAEIRDPHRAA 112

Query: 75  RVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPE 110
           RVWLGTFDTAEAAA AYDEAALRF+G KAKLNFPE
Sbjct: 113 RVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPE 134

[Close]

BLAST of Carg10239 vs. TrEMBL
Match: tr|A0A1S3CLA5|A0A1S3CLA5_CUCME (ethylene-responsive transcription factor ERF115 OS=Cucumis melo OX=3656 GN=LOC103502272 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.3e-31
Identity = 79/114 (69.30%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 1   MVSALAQVITSGSGSSRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQRPW 60
           MVSAL QVITSG              +   A+      G +  G+    RHYRGVRQRPW
Sbjct: 1   MVSALTQVITSGXXXXXXXXXXXXVVEEPAASV----RGDNEEGVKRESRHYRGVRQRPW 60

Query: 61  GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 115
           GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP
Sbjct: 61  GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 110

[Close]

BLAST of Carg10239 vs. TrEMBL
Match: tr|E5GBL4|E5GBL4_CUCME (AP2 domain transcription factor RAP2.3 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.3e-31
Identity = 79/114 (69.30%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 1   MVSALAQVITSGSGSSRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQRPW 60
           MVSAL QVITSG              +   A+      G +  G+    RHYRGVRQRPW
Sbjct: 1   MVSALTQVITSGXXXXXXXXXXXXVVEEPAASV----RGDNEEGVKRESRHYRGVRQRPW 60

Query: 61  GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 115
           GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP
Sbjct: 61  GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 110

[Close]

BLAST of Carg10239 vs. TrEMBL
Match: tr|A0A0A0LTV8|A0A0A0LTV8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000550 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.0e-31
Identity = 79/114 (69.30%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 1   MVSALAQVITSGSGSSRSPVEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQRPW 60
           MVSAL QVITS               +   A+A     G +  G+    RHYRGVRQRPW
Sbjct: 88  MVSALTQVITSXXXXXXXXXXXXXVVEEPAASA----RGDNEEGVKRESRHYRGVRQRPW 147

Query: 61  GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 115
           GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP
Sbjct: 148 GKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 197

[Close]

BLAST of Carg10239 vs. TrEMBL
Match: tr|A0A2I4FMK5|A0A2I4FMK5_9ROSI (ethylene-responsive transcription factor ERF114-like OS=Juglans regia OX=51240 GN=LOC109000456 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.3e-30
Identity = 79/115 (68.70%), Postives = 87/115 (75.65%), Query Frame = 0


Query: 1   MVSALAQVITSGSGSSRSPVEADYWPQSQQAAADEEQGGGSR----TGMVSRERHYRGVR 60
           MVSALAQVI   S   ++PV+    P     ++  EQ   S+     G V R RHYRGVR
Sbjct: 35  MVSALAQVI---SNRDQNPVQVHGNPLITSQSSTREQDDQSQPTLDQGNVRRPRHYRGVR 94

Query: 61  QRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERL 112
           QRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKG+KAKLNFPER+
Sbjct: 95  QRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGSKAKLNFPERV 146

[Close]

BLAST of Carg10239 vs. TrEMBL
Match: tr|A0A164XF47|A0A164XF47_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_016339 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.3e-30
Identity = 78/119 (65.55%), Postives = 87/119 (73.11%), Query Frame = 0


Query: 1   MVSALAQVITSGSGSSRSP-------VEADYWPQSQQAAADEEQGGGSRTGMVSRERHYR 60
           MVSAL+QVI + SG    P        EA    QS Q A +++Q G        R+RHYR
Sbjct: 45  MVSALSQVIGASSGGQFYPSEAVSGYTEATQQIQSSQPARNDDQQG----NQALRKRHYR 104

Query: 61  GVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLT 113
           GVRQRPWGKWAAEIRDP KAARVWLGTFDTAEAAA+AYD+AALRFKG KAKLNFPER+T
Sbjct: 105 GVRQRPWGKWAAEIRDPVKAARVWLGTFDTAEAAAIAYDDAALRFKGNKAKLNFPERVT 159

The following BLAST results are available for this feature:

BLAST of Carg10239 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921378.1	4.1e-56	100.00	ethylene-responsive transcription factor ERF114-like, partial [Cucurbita moschat...	[more]
XP_023516838.1	3.8e-54	97.41	ethylene-responsive transcription factor ERF115-like [Cucurbita pepo subsp. pepo...	[more]
XP_022987260.1	8.5e-54	97.41	ethylene-responsive transcription factor ERF115-like [Cucurbita maxima]	[more]
XP_004138017.1	4.1e-32	70.18	PREDICTED: ethylene-responsive transcription factor ERF115 [Cucumis sativus]	[more]
XP_008464362.1	2.0e-31	69.30	PREDICTED: ethylene-responsive transcription factor ERF115 [Cucumis melo] >ADN33...	[more]

BLAST of Carg10239 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G61890.1	2.1e-30	61.98	Integrase-type DNA-binding superfamily protein	[more]
AT5G07310.1	2.7e-30	63.16	Integrase-type DNA-binding superfamily protein	[more]
AT5G13330.1	4.7e-30	63.16	related to AP2 6l	[more]
AT2G33710.2	1.1e-26	83.08	Integrase-type DNA-binding superfamily protein	[more]
AT5G50080.1	7.0e-26	65.26	ethylene response factor 110	[more]

BLAST of Carg10239 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FH54\|EF114_ARATH	3.8e-29	61.98	Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9LY29\|EF115_ARATH	4.9e-29	63.16	Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9LYU3\|EF113_ARATH	8.4e-29	63.16	Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|P93007\|EF112_ARATH	1.9e-25	83.08	Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q70II3\|EF110_ARATH	1.3e-24	65.26	Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Carg10239 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CLA5\|A0A1S3CLA5_CUCME	1.3e-31	69.30	ethylene-responsive transcription factor ERF115 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|E5GBL4\|E5GBL4_CUCME	1.3e-31	69.30	AP2 domain transcription factor RAP2.3 OS=Cucumis melo subsp. melo OX=412675 PE=...	[more]
tr\|A0A0A0LTV8\|A0A0A0LTV8_CUCSA	3.0e-31	69.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000550 PE=4 SV=1	[more]
tr\|A0A2I4FMK5\|A0A2I4FMK5_9ROSI	3.3e-30	68.70	ethylene-responsive transcription factor ERF114-like OS=Juglans regia OX=51240 G...	[more]
tr\|A0A164XF47\|A0A164XF47_DAUCA	4.3e-30	65.55	Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_016339 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR017392	AP2/ERF-transcript_factor
IPR036955	AP2/ERF_dom_sf
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10239-RA	Carg10239-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 52..63 score: 76.67 coord: 74..90 score: 70.7
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 51..114 e-value: 1.3E-37 score: 141.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 51..100 e-value: 1.3E-14 score: 54.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 51..108 score: 25.014
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 51..109 e-value: 1.97997E-19 score: 76.1563
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 50..111 e-value: 1.6E-32 score: 113.1
IPR017392	AP2/ERF transcription factor ERF/PTI6	PIRSF	PIRSF038123	PTI6	coord: 14..115 e-value: 7.8E-26 score: 89.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..36
None	No IPR available	PANTHER	PTHR31190:SF73	SUBFAMILY NOT NAMED	coord: 1..119
None	No IPR available	PANTHER	PTHR31190	FAMILY NOT NAMED	coord: 1..119
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 51..109

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg10239	Cla019324	Watermelon (97103) v1	carwmB0356
Carg10239	Csa1G000550	Cucumber (Chinese Long) v2	carcuB0391
Carg10239	MELO3C026158	Melon (DHL92) v3.5.1	carmeB0369
Carg10239	ClCG06G018370	Watermelon (Charleston Gray)	carwcgB0357
Carg10239	CSPI01G00060	Wild cucumber (PI 183967)	carcpiB0396
Carg10239	Cucsa.156890	Cucumber (Gy14) v1	carcgyB0422
Carg10239	CmaCh10G000100	Cucurbita maxima (Rimu)	carcmaB0510
Carg10239	CmoCh10G000080	Cucurbita moschata (Rifu)	carcmoB0493
Carg10239	Lsi06G016870	Bottle gourd (USVL1VR-Ls)	carlsiB331
Carg10239	CsGy1G000050	Cucumber (Gy14) v2	carcgybB0371
Carg10239	MELO3C026158.2	Melon (DHL92) v3.6.1	carmedB0375
Carg10239	CsaV3_1G000060	Cucumber (Chinese Long) v3	carcucB0395
Carg10239	Cla97C06G128180	Watermelon (97103) v2	carwmbB0382
Carg10239	Bhi02G000464	Wax gourd	carwgoB0448

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg10239	Carg11559	Silver-seed gourd	carcarB012

The following block(s) are covering this gene:


Gene	Organism	Block
Carg10239	Silver-seed gourd	carcarB391
Carg10239	Cucurbita maxima (Rimu)	carcmaB0511
Carg10239	Cucurbita moschata (Rifu)	carcmoB0494
Carg10239	Cucurbita pepo (Zucchini)	carcpeB0508
Carg10239	Cucurbita pepo (Zucchini)	carcpeB0514