CsaV3_1G000060 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G000060
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionEthylene-responsive transcription factor
Locationchr1 : 57226 .. 59022 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCATGCCAATGCTATGGATATGTCCATTCAATGGTTGGTGTTTATTCCACAGGAACAAAAGTTTACTCGAGTGATTATTGGCTTAGATGTGCCAGGAACCCTTTTCTGTTCTGGAGAATATAATAGGTGATACCGTGTCTTCTATTCTTATGTTGGGTAAAAGAATTGAAAGGAATATCGGAGACAAAAATAAAAAAGGTCAATAACTACAAAAATTAAAGTTGTAAAATAAAGTCGATACAAAAATAAAAAATGTCAATAGCTAACGAAGAGGTCATGAGTTTGACATATTGTGGTCATTTATCTACGAATTAATTTTTTTAAATATTTTTAGTAGCAATAAAATTAAATATAAAATTTATTTTTTATTGCAATTTTACTTTCAATTGTGTATAAATATTTAAGTATATGTGATATATTTTATAGGTTAGTTTTCATAAATATAACAAAACAACAAAATTTTACAGTTCAGGTATGTAATAAAATAAAAAAATCCAAAATATTTTCGTAAATTCCAGGTTTGCTCTTGAATATTGCGGACCATATTTCACTTTTTCTCTTTTAGAATTTCTTGCTTCGATTTTTCACTTCTTCAAATCCCTACTTGGTAAACGTTCTTCATCATCTCTTATATATTTCCTCTTCTAGACCTAAACGATCGTGTACTAAGATCTAAACGGTTCAAGATCGTATACCAGTTATGTAATTATGTAATTATGTAATTATGGAAGTTGTTTTTTGTAATTATGTAATTATGGGCTCAAACTCAAGGCTTAATTGTGTAATTATGGAAGTTGTTTTTTGTTTGTTTTGTTATGATTGTTTTCCCCATTTGGATCGTTATTTATATCATTTGATTTTTCAACGGTGGCATATGATTTTATAAAAAAAGATTTTTTTTTAATATAATTTTGATATGGGTATATCTTAATCACATATTAATTCATCTGTGAATTAACAAAATCATCCATTTCATAAATTTTGAGGTTCTAACTATATGTGAATGCTAACACATGAAATCCATCAACGAAATTAGAGGACCACTAGAAAAGCAGTTCTAAAAAAGGAACAAATGTCATGAATGTTAAAAGTATTCAAGTAAGAATAAAATATTTTGTAAAATAAACCAACCAAACACAAGTGTGTAAAAAGTTTTTTGCTTTTATTTTTTTATTTTAAATTTATTGTTTTAACAAATGAGAAAGCCATAACAAAATCTATATATAGAGAGAGAGGATAGGTTGGTAAGGGAAAAGGGGCACCCCGGAGAAGGTATATCAAGGAAAGGGAAAAATTAAAAGTGGATCCGAAGCGAGGGAAGAGAGCACTTTGTTCCGATGAATCGGAGGAAGAAAATCCGTTCCCGATCTACTCAGCTAGATCTGAATATGACACGTCGGCGATGGTATCTGCGTTAACTCAAGTGATAACGAGTGGGAGTGGGAGTGGCAGTGGGAGTAGCAGAAGCCTATCAGTAGTAGAAGAACCTGCAGCATCAGCGCGGGGAGATAATGAAGAAGGAGTGAAAAGGGAAAGCCGACATTATCGAGGAGTAAGGCAGAGACCGTGGGGAAAATGGGCTGCTGAGATTCGTGATCCAAAAAAGGCAGCAAGAGTGTGGTTGGGCACCTTTGACACTGCCGAGGCTGCGGCACTTGCTTACGATGAAGCTGCCCTCAGATTTAAGGGCACAAAAGCCAAGCTTAACTTCCCTGAGAGACTTACCACCCCACCATCATACCCCTATGCCCCCTATCATCATCAGGATGATTACCAAAACCACCGCTTTTAG

mRNA sequence

ATGGTTCATGCCAATGCTATGGATATGTCCATTCAATGGTTGGTGTTTATTCCACAGGAACAAAAGTTTACTCGAGTGATTATTGGCTTAGATGTGCCAGGAACCCTTTTCTGTTCTGGAGAATATAATAGGTATATCAAGGAAAGGGAAAAATTAAAAGTGGATCCGAAGCGAGGGAAGAGAGCACTTTGTTCCGATGAATCGGAGGAAGAAAATCCGTTCCCGATCTACTCAGCTAGATCTGAATATGACACGTCGGCGATGGTATCTGCGTTAACTCAAGTGATAACGAGTGGGAGTGGGAGTGGCAGTGGGAGTAGCAGAAGCCTATCAGTAGTAGAAGAACCTGCAGCATCAGCGCGGGGAGATAATGAAGAAGGAGTGAAAAGGGAAAGCCGACATTATCGAGGAGTAAGGCAGAGACCGTGGGGAAAATGGGCTGCTGAGATTCGTGATCCAAAAAAGGCAGCAAGAGTGTGGTTGGGCACCTTTGACACTGCCGAGGCTGCGGCACTTGCTTACGATGAAGCTGCCCTCAGATTTAAGGGCACAAAAGCCAAGCTTAACTTCCCTGAGAGACTTACCACCCCACCATCATACCCCTATGCCCCCTATCATCATCAGGATGATTACCAAAACCACCGCTTTTAG

Coding sequence (CDS)

ATGGTTCATGCCAATGCTATGGATATGTCCATTCAATGGTTGGTGTTTATTCCACAGGAACAAAAGTTTACTCGAGTGATTATTGGCTTAGATGTGCCAGGAACCCTTTTCTGTTCTGGAGAATATAATAGGTATATCAAGGAAAGGGAAAAATTAAAAGTGGATCCGAAGCGAGGGAAGAGAGCACTTTGTTCCGATGAATCGGAGGAAGAAAATCCGTTCCCGATCTACTCAGCTAGATCTGAATATGACACGTCGGCGATGGTATCTGCGTTAACTCAAGTGATAACGAGTGGGAGTGGGAGTGGCAGTGGGAGTAGCAGAAGCCTATCAGTAGTAGAAGAACCTGCAGCATCAGCGCGGGGAGATAATGAAGAAGGAGTGAAAAGGGAAAGCCGACATTATCGAGGAGTAAGGCAGAGACCGTGGGGAAAATGGGCTGCTGAGATTCGTGATCCAAAAAAGGCAGCAAGAGTGTGGTTGGGCACCTTTGACACTGCCGAGGCTGCGGCACTTGCTTACGATGAAGCTGCCCTCAGATTTAAGGGCACAAAAGCCAAGCTTAACTTCCCTGAGAGACTTACCACCCCACCATCATACCCCTATGCCCCCTATCATCATCAGGATGATTACCAAAACCACCGCTTTTAG

Protein sequence

MVHANAMDMSIQWLVFIPQEQKFTRVIIGLDVPGTLFCSGEYNRYIKEREKLKVDPKRGKRALCSDESEEENPFPIYSARSEYDTSAMVSALTQVITSGSGSGSGSSRSLSVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHHQDDYQNHRF
Homology
[Close]
BLAST of CsaV3_1G000060 vs. NCBI nr
Match: KGN63431.1 (hypothetical protein Csa_1G000550 [Cucumis sativus])

HSP 1 Score: 410.2 bits (1053), Expect = 4.3e-111
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0 

Query: 1   MVHANAMDMSIQWLVFIPQEQKFTRVIIGLDVPGTLFCSGEYNRYIKEREKLKVDPKRGK 60
           MVHANAMDMSIQWLVFIPQEQKFTRVIIGLDVPGTLFCSGEYNRYIKEREKLKVDPKRGK
Sbjct: 1   MVHANAMDMSIQWLVFIPQEQKFTRVIIGLDVPGTLFCSGEYNRYIKEREKLKVDPKRGK 60

Query: 61  RALCSDESEEENPFPIYSARSEYDTSAMVSALTQVITSXXXXXXXXXXXXXVVEEPAASA 120
           RALCSDESEEENPFPIYSARSEYDTSAMVSALTQVITSXXXXXXXXXXXXXVVEEPAASA
Sbjct: 61  RALCSDESEEENPFPIYSARSEYDTSAMVSALTQVITSXXXXXXXXXXXXXVVEEPAASA 120

Query: 121 RGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALR 180
           RGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALR
Sbjct: 121 RGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALR 180

Query: 181 FKGTKAKLNFPERLTTPPSYPYAPYHHQDDYQNHRF 217
           FKGTKAKLNFPERLTTPPSYPYAPYHHQDDYQNHRF
Sbjct: 181 FKGTKAKLNFPERLTTPPSYPYAPYHHQDDYQNHRF 216

[Close]
BLAST of CsaV3_1G000060 vs. NCBI nr
Match: XP_004138017.1 (PREDICTED: ethylene-responsive transcription factor ERF115 [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 2.7e-57
Identity = 127/129 (98.45%), Postives = 127/129 (98.45%), Query Frame = 0 

Query: 88  MVSALTQVITSXXXXXXXXXXXXXVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWA 147
           MVSALTQVITS XXXXXXXXXXXX VEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWA
Sbjct: 1   MVSALTQVITSGXXXXXXXXXXXXXVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWA 60

Query: 148 AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHH 207
           AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHH
Sbjct: 61  AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHH 120

Query: 208 QDDYQNHRF 217
           QDDYQNHRF
Sbjct: 121 QDDYQNHRF 129

[Close]
BLAST of CsaV3_1G000060 vs. NCBI nr
Match: XP_008464362.1 (PREDICTED: ethylene-responsive transcription factor ERF115 [Cucumis melo] >ADN33855.1 AP2 domain transcription factor RAP2.3 [Cucumis melo subsp. melo])

HSP 1 Score: 224.9 bits (572), Expect = 2.6e-55
Identity = 124/129 (96.12%), Postives = 126/129 (97.67%), Query Frame = 0 

Query: 88  MVSALTQVITSXXXXXXXXXXXXXVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWA 147
           MVSALTQVITS XXXXXXXXXXXXVVEEPAAS RGDNEEGVKRESRHYRGVRQRPWGKWA
Sbjct: 1   MVSALTQVITSGXXXXXXXXXXXXVVEEPAASVRGDNEEGVKRESRHYRGVRQRPWGKWA 60

Query: 148 AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHH 207
           AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSY YAPYHH
Sbjct: 61  AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYSYAPYHH 120

Query: 208 QDDYQNHRF 217
           QDD+Q+HRF
Sbjct: 121 QDDHQDHRF 129

[Close]
BLAST of CsaV3_1G000060 vs. NCBI nr
Match: XP_022921378.1 (ethylene-responsive transcription factor ERF114-like, partial [Cucurbita moschata])

HSP 1 Score: 204.9 bits (520), Expect = 2.7e-49
Identity = 110/155 (70.97%), Postives = 117/155 (75.48%), Query Frame = 0 

Query: 47  KEREKLKVDPKRGKRALCSDESEEENPFPIYSARSEYDTSAMVSALTQVITSXXXXXXXX 106
           K  +KLKVDP RGKR   SDE EEENPFPIYSARS++DTSAMVSAL QVITS        
Sbjct: 3   KTPKKLKVDPNRGKRPFSSDELEEENPFPIYSARSQHDTSAMVSALAQVITSGSGSSRSP 62

Query: 107 XXXXXVVEEPAASA----RGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLG 166
                  +   A+A     G +  G+    RHYRGVRQRPWGKWAAEIRDPKKAARVWLG
Sbjct: 63  VEADYWPQSQQAAADEEQGGGSRTGMVSRERHYRGVRQRPWGKWAAEIRDPKKAARVWLG 122

Query: 167 TFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 198
           TFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP
Sbjct: 123 TFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTP 157

[Close]
BLAST of CsaV3_1G000060 vs. NCBI nr
Match: RDX89871.1 (Ethylene-responsive transcription factor ERF114, partial [Mucuna pruriens])

HSP 1 Score: 168.7 bits (426), Expect = 2.2e-38
Identity = 90/150 (60.00%), Postives = 102/150 (68.00%), Query Frame = 0 

Query: 53  KVDPKRGKRALCSDESEEENPFPIYSARSEYDTSAMVSALTQVITSXXXXXXXXXXXXXV 112
           KVD K GKR+L  +E EEENPFP+YS RS+ D SA+VSAL QVI                
Sbjct: 2   KVDRKHGKRSLPLEEEEEENPFPVYSNRSQQDMSAVVSALVQVIGGNPVHQDPITVSHST 61

Query: 113 VEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAL 172
                ++ +    +      R YRGVRQRPWGKWAAEIRDPKKAARVWLGTF TAEAAAL
Sbjct: 62  AVGNDSNEKSQPPQHQGNARREYRGVRQRPWGKWAAEIRDPKKAARVWLGTFQTAEAAAL 121

Query: 173 AYDEAALRFKGTKAKLNFPERLTTPPSYPY 203
           AYDEAALRFKG+KAKLNFPER+   P + Y
Sbjct: 122 AYDEAALRFKGSKAKLNFPERVQFSPQFGY 151

[Close]
BLAST of CsaV3_1G000060 vs. TAIR10
Match: AT5G07310.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 156.4 bits (394), Expect = 2.0e-38
Identity = 88/144 (61.11%), Postives = 102/144 (70.83%), Query Frame = 0 

Query: 59  GKRALCSDESEE-------ENPFPIYSARSEYDTSAMVSALTQVITSXXXXXXXXXXXXX 118
           GKR    DES+E       EN FP +SARS+YD  AMVSALTQVI +             
Sbjct: 8   GKRPFRGDESDEKKEADDDENIFPFFSARSQYDMRAMVSALTQVIGNQSSSHDNNQHQPV 67

Query: 119 VV--EEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEA 178
           V   ++P   A    ++G+ R+ RHYRGVRQRPWGKWAAEIRDP+KAARVWLGTF+TAEA
Sbjct: 68  VYNQQDPNPPAPPTQDQGLLRK-RHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEA 127

Query: 179 AALAYDEAALRFKGTKAKLNFPER 194
           AALAYD AAL+FKG+KAKLNFPER
Sbjct: 128 AALAYDNAALKFKGSKAKLNFPER 150

[Close]
BLAST of CsaV3_1G000060 vs. TAIR10
Match: AT5G61890.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 151.4 bits (381), Expect = 6.5e-37
Identity = 86/147 (58.50%), Postives = 100/147 (68.03%), Query Frame = 0 

Query: 59  GKRALCSDESEE----ENPFPIYSARSEYDTSAMVSALTQVI-----TSXXXXXXXXXXX 118
           GKR    DESEE    EN FP++SARS++D   MVSALTQVI      S           
Sbjct: 3   GKRPFGGDESEEREEDENLFPVFSARSQHDMRVMVSALTQVIGNQQSKSHDNISSIDDNY 62

Query: 119 XXVV--EEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTA 178
             V   ++P       +++      RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TA
Sbjct: 63  PSVYNPQDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETA 122

Query: 179 EAAALAYDEAALRFKGTKAKLNFPERL 195
           E+AALAYDEAAL+FKG+KAKLNFPER+
Sbjct: 123 ESAALAYDEAALKFKGSKAKLNFPERV 149

[Close]
BLAST of CsaV3_1G000060 vs. TAIR10
Match: AT5G13330.1 (related to AP2 6l)

HSP 1 Score: 124.4 bits (311), Expect = 8.6e-29
Identity = 72/120 (60.00%), Postives = 84/120 (70.00%), Query Frame = 0 

Query: 88  MVSALTQVITSXXXXXXXXXXXXXVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWA 147
           MVSAL++VI +             V +E   S +   ++   R  RHYRGVRQRPWGKWA
Sbjct: 1   MVSALSRVIEN--------PTDPPVKQELDKSDQHQPDQDQPRR-RHYRGVRQRPWGKWA 60

Query: 148 AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERL---TTPPSYPYAP 205
           AEIRDPKKAARVWLGTF+TAE AALAYD AAL+FKGTKAKLNFPER+   TT  +  +AP
Sbjct: 61  AEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTTTTTISHAP 111

[Close]
BLAST of CsaV3_1G000060 vs. TAIR10
Match: AT5G50080.1 (ethylene response factor 110)

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-27
Identity = 73/141 (51.77%), Postives = 83/141 (58.87%), Query Frame = 0 

Query: 86  SAMVSALTQVI-------------TSXXXXXXXXXXXXXVVEEPAASARGDNE------- 145
           SAMVSALTQV+             +S                 P++ AR D+        
Sbjct: 2   SAMVSALTQVVSARSQTEAEGAHSSSSSAGHKRGWLGIDSAPIPSSFARVDSSHNPIEES 61

Query: 146 ------EGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAAL 199
                 E  + + R YRGVRQRPWGKWAAEIRDP +AARVWLGTFDTAEAAA AYDEAAL
Sbjct: 62  MSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAAL 121

[Close]
BLAST of CsaV3_1G000060 vs. TAIR10
Match: AT2G33710.2 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 116.3 bits (290), Expect = 2.3e-26
Identity = 74/149 (49.66%), Postives = 87/149 (58.39%), Query Frame = 0 

Query: 59  GKRALCSD----ESEEENPFPIYSARSEYDTSAMVSALT-QVITSXXXXXXXXXXXXXVV 118
           GKR L  +      EE+      S  SE D S  VS LT Q I S              +
Sbjct: 4   GKRPLSPESMAGNREEKKELCCCSTLSESDVSDFVSELTGQPIPSS-------------I 63

Query: 119 EEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALA 178
           ++ ++S     +E      R+YRGVRQRPWGKWAAEIRDP KAARVWLGTFDTAE AALA
Sbjct: 64  DDQSSSL--TLQEKSNSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALA 123

Query: 179 YDEAALRFKGTKAKLNFPERLTTPPSYPY 203
           YD+AA  F+G KAKLNFPE +   P+  Y
Sbjct: 124 YDKAAFEFRGHKAKLNFPEHIRVNPTQLY 137

[Close]
BLAST of CsaV3_1G000060 vs. Swiss-Prot
Match: sp|Q9LY29|EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 GN=ERF115 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.7e-37
Identity = 88/144 (61.11%), Postives = 102/144 (70.83%), Query Frame = 0 

Query: 59  GKRALCSDESEE-------ENPFPIYSARSEYDTSAMVSALTQVITSXXXXXXXXXXXXX 118
           GKR    DES+E       EN FP +SARS+YD  AMVSALTQVI +             
Sbjct: 8   GKRPFRGDESDEKKEADDDENIFPFFSARSQYDMRAMVSALTQVIGNQSSSHDNNQHQPV 67

Query: 119 VV--EEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEA 178
           V   ++P   A    ++G+ R+ RHYRGVRQRPWGKWAAEIRDP+KAARVWLGTF+TAEA
Sbjct: 68  VYNQQDPNPPAPPTQDQGLLRK-RHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEA 127

Query: 179 AALAYDEAALRFKGTKAKLNFPER 194
           AALAYD AAL+FKG+KAKLNFPER
Sbjct: 128 AALAYDNAALKFKGSKAKLNFPER 150

[Close]
BLAST of CsaV3_1G000060 vs. Swiss-Prot
Match: sp|Q9FH54|EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 GN=ERF114 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-35
Identity = 86/147 (58.50%), Postives = 100/147 (68.03%), Query Frame = 0 

Query: 59  GKRALCSDESEE----ENPFPIYSARSEYDTSAMVSALTQVI-----TSXXXXXXXXXXX 118
           GKR    DESEE    EN FP++SARS++D   MVSALTQVI      S           
Sbjct: 3   GKRPFGGDESEEREEDENLFPVFSARSQHDMRVMVSALTQVIGNQQSKSHDNISSIDDNY 62

Query: 119 XXVV--EEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTA 178
             V   ++P       +++      RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TA
Sbjct: 63  PSVYNPQDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETA 122

Query: 179 EAAALAYDEAALRFKGTKAKLNFPERL 195
           E+AALAYDEAAL+FKG+KAKLNFPER+
Sbjct: 123 ESAALAYDEAALKFKGSKAKLNFPERV 149

[Close]
BLAST of CsaV3_1G000060 vs. Swiss-Prot
Match: sp|Q9LYU3|EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 GN=ERF113 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.5e-27
Identity = 72/120 (60.00%), Postives = 84/120 (70.00%), Query Frame = 0 

Query: 88  MVSALTQVITSXXXXXXXXXXXXXVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWA 147
           MVSAL++VI +             V +E   S +   ++   R  RHYRGVRQRPWGKWA
Sbjct: 1   MVSALSRVIEN--------PTDPPVKQELDKSDQHQPDQDQPRR-RHYRGVRQRPWGKWA 60

Query: 148 AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERL---TTPPSYPYAP 205
           AEIRDPKKAARVWLGTF+TAE AALAYD AAL+FKGTKAKLNFPER+   TT  +  +AP
Sbjct: 61  AEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTTTTTISHAP 111

[Close]
BLAST of CsaV3_1G000060 vs. Swiss-Prot
Match: sp|Q70II3|EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 2.9e-26
Identity = 73/141 (51.77%), Postives = 83/141 (58.87%), Query Frame = 0 

Query: 86  SAMVSALTQVI-------------TSXXXXXXXXXXXXXVVEEPAASARGDNE------- 145
           SAMVSALTQV+             +S                 P++ AR D+        
Sbjct: 2   SAMVSALTQVVSARSQTEAEGAHSSSSSAGHKRGWLGIDSAPIPSSFARVDSSHNPIEES 61

Query: 146 ------EGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAAL 199
                 E  + + R YRGVRQRPWGKWAAEIRDP +AARVWLGTFDTAEAAA AYDEAAL
Sbjct: 62  MSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAAL 121

[Close]
BLAST of CsaV3_1G000060 vs. Swiss-Prot
Match: sp|P93007|EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 GN=ERF112 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.2e-25
Identity = 74/149 (49.66%), Postives = 87/149 (58.39%), Query Frame = 0 

Query: 59  GKRALCSD----ESEEENPFPIYSARSEYDTSAMVSALT-QVITSXXXXXXXXXXXXXVV 118
           GKR L  +      EE+      S  SE D S  VS LT Q I S              +
Sbjct: 4   GKRPLSPESMAGNREEKKELCCCSTLSESDVSDFVSELTGQPIPSS-------------I 63

Query: 119 EEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALA 178
           ++ ++S     +E      R+YRGVRQRPWGKWAAEIRDP KAARVWLGTFDTAE AALA
Sbjct: 64  DDQSSSL--TLQEKSNSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALA 123

Query: 179 YDEAALRFKGTKAKLNFPERLTTPPSYPY 203
           YD+AA  F+G KAKLNFPE +   P+  Y
Sbjct: 124 YDKAAFEFRGHKAKLNFPEHIRVNPTQLY 137

[Close]
BLAST of CsaV3_1G000060 vs. TrEMBL
Match: tr|A0A0A0LTV8|A0A0A0LTV8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000550 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 2.8e-111
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0 

Query: 1   MVHANAMDMSIQWLVFIPQEQKFTRVIIGLDVPGTLFCSGEYNRYIKEREKLKVDPKRGK 60
           MVHANAMDMSIQWLVFIPQEQKFTRVIIGLDVPGTLFCSGEYNRYIKEREKLKVDPKRGK
Sbjct: 1   MVHANAMDMSIQWLVFIPQEQKFTRVIIGLDVPGTLFCSGEYNRYIKEREKLKVDPKRGK 60

Query: 61  RALCSDESEEENPFPIYSARSEYDTSAMVSALTQVITSXXXXXXXXXXXXXVVEEPAASA 120
           RALCSDESEEENPFPIYSARSEYDTSAMVSALTQVITSXXXXXXXXXXXXXVVEEPAASA
Sbjct: 61  RALCSDESEEENPFPIYSARSEYDTSAMVSALTQVITSXXXXXXXXXXXXXVVEEPAASA 120

Query: 121 RGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALR 180
           RGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALR
Sbjct: 121 RGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALR 180

Query: 181 FKGTKAKLNFPERLTTPPSYPYAPYHHQDDYQNHRF 217
           FKGTKAKLNFPERLTTPPSYPYAPYHHQDDYQNHRF
Sbjct: 181 FKGTKAKLNFPERLTTPPSYPYAPYHHQDDYQNHRF 216

[Close]
BLAST of CsaV3_1G000060 vs. TrEMBL
Match: tr|A0A1S3CLA5|A0A1S3CLA5_CUCME (ethylene-responsive transcription factor ERF115 OS=Cucumis melo OX=3656 GN=LOC103502272 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.7e-55
Identity = 124/129 (96.12%), Postives = 126/129 (97.67%), Query Frame = 0 

Query: 88  MVSALTQVITSXXXXXXXXXXXXXVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWA 147
           MVSALTQVITS XXXXXXXXXXXXVVEEPAAS RGDNEEGVKRESRHYRGVRQRPWGKWA
Sbjct: 1   MVSALTQVITSGXXXXXXXXXXXXVVEEPAASVRGDNEEGVKRESRHYRGVRQRPWGKWA 60

Query: 148 AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHH 207
           AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSY YAPYHH
Sbjct: 61  AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYSYAPYHH 120

Query: 208 QDDYQNHRF 217
           QDD+Q+HRF
Sbjct: 121 QDDHQDHRF 129

[Close]
BLAST of CsaV3_1G000060 vs. TrEMBL
Match: tr|E5GBL4|E5GBL4_CUCME (AP2 domain transcription factor RAP2.3 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.7e-55
Identity = 124/129 (96.12%), Postives = 126/129 (97.67%), Query Frame = 0 

Query: 88  MVSALTQVITSXXXXXXXXXXXXXVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWA 147
           MVSALTQVITS XXXXXXXXXXXXVVEEPAAS RGDNEEGVKRESRHYRGVRQRPWGKWA
Sbjct: 1   MVSALTQVITSGXXXXXXXXXXXXVVEEPAASVRGDNEEGVKRESRHYRGVRQRPWGKWA 60

Query: 148 AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHH 207
           AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSY YAPYHH
Sbjct: 61  AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYSYAPYHH 120

Query: 208 QDDYQNHRF 217
           QDD+Q+HRF
Sbjct: 121 QDDHQDHRF 129

[Close]
BLAST of CsaV3_1G000060 vs. TrEMBL
Match: tr|A0A2I4FMK5|A0A2I4FMK5_9ROSI (ethylene-responsive transcription factor ERF114-like OS=Juglans regia OX=51240 GN=LOC109000456 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.1e-37
Identity = 92/159 (57.86%), Postives = 106/159 (66.67%), Query Frame = 0 

Query: 59  GKRALCS---DESEEENPFPIYSARSEYDTSAMVSALTQVITSXXXXXXXXXXXXXVVEE 118
           GKR L S   +E EE++ FP YSARS+ D S MVSAL QVI++             +  +
Sbjct: 3   GKRPLPSNEGEEKEEDHIFPTYSARSQQDMSVMVSALAQVISNRDQNPVQVHGNPLITSQ 62

Query: 119 PAASARGDN-----EEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAA 178
            +   + D      ++G  R  RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAA
Sbjct: 63  SSTREQDDQSQPTLDQGNVRRPRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAA 122

Query: 179 ALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHHQD 210
           ALAYDEAALRFKG+KAKLNFPER+       Y    HQD
Sbjct: 123 ALAYDEAALRFKGSKAKLNFPERVQGRNEIGYLTTRHQD 161

[Close]
BLAST of CsaV3_1G000060 vs. TrEMBL
Match: tr|D7M0H8|D7M0H8_ARALL (Uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_487556 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 7.9e-37
Identity = 94/160 (58.75%), Postives = 110/160 (68.75%), Query Frame = 0 

Query: 59  GKRALCSDESEE-------ENPFPIYSARSEYDTSAMVSALTQVITSXXXXXXXXXXXXX 118
           GKR   +DES+E       EN FP +SARS+YDT AMVSALTQVI +             
Sbjct: 8   GKRPFRADESDEKKEGDDDENIFPFFSARSQYDTRAMVSALTQVIGNQSSSHDNTQHQPV 67

Query: 119 VV--EEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEA 178
           V   + P   A    ++G+ R+ RHYRGVRQRPWGKWAAEIRDP+KAARVWLGTF+TAEA
Sbjct: 68  VYNQQNPNQPAPPTQDQGLVRK-RHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEA 127

Query: 179 AALAYDEAALRFKGTKAKLNFPER---------LTTPPSY 201
           AALAYDEAAL+FKG+KAKLNFPER         +T PP+Y
Sbjct: 128 AALAYDEAALKFKGSKAKLNFPERAQLASNTNSITGPPNY 166

The following BLAST results are available for this feature:
BLAST of CsaV3_1G000060 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63431.14.3e-111100.00hypothetical protein Csa_1G000550 [Cucumis sativus][more]
XP_004138017.12.7e-5798.45PREDICTED: ethylene-responsive transcription factor ERF115 [Cucumis sativus][more]
XP_008464362.12.6e-5596.12PREDICTED: ethylene-responsive transcription factor ERF115 [Cucumis melo] >ADN33... [more]
XP_022921378.12.7e-4970.97ethylene-responsive transcription factor ERF114-like, partial [Cucurbita moschat... [more]
RDX89871.12.2e-3860.00Ethylene-responsive transcription factor ERF114, partial [Mucuna pruriens][more]
BLAST of CsaV3_1G000060 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07310.12.0e-3861.11Integrase-type DNA-binding superfamily protein[more]
AT5G61890.16.5e-3758.50Integrase-type DNA-binding superfamily protein[more]
AT5G13330.18.6e-2960.00related to AP2 6l[more]
AT5G50080.11.6e-2751.77ethylene response factor 110[more]
AT2G33710.22.3e-2649.66Integrase-type DNA-binding superfamily protein[more]
BLAST of CsaV3_1G000060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LY29|EF115_ARATH3.7e-3761.11Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9FH54|EF114_ARATH1.2e-3558.50Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q9LYU3|EF113_ARATH1.5e-2760.00Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q70II3|EF110_ARATH2.9e-2651.77Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|P93007|EF112_ARATH4.2e-2549.66Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of CsaV3_1G000060 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LTV8|A0A0A0LTV8_CUCSA2.8e-111100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000550 PE=4 SV=1[more]
tr|A0A1S3CLA5|A0A1S3CLA5_CUCME1.7e-5596.12ethylene-responsive transcription factor ERF115 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|E5GBL4|E5GBL4_CUCME1.7e-5596.12AP2 domain transcription factor RAP2.3 OS=Cucumis melo subsp. melo OX=412675 PE=... [more]
tr|A0A2I4FMK5|A0A2I4FMK5_9ROSI2.1e-3757.86ethylene-responsive transcription factor ERF114-like OS=Juglans regia OX=51240 G... [more]
tr|D7M0H8|D7M0H8_ARALL7.9e-3758.75Uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata OX=81972 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf
IPR036955AP2/ERF_dom_sf
IPR001471AP2/ERF_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0032008 positive regulation of TOR signaling
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G000060.1CsaV3_1G000060.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 157..173
score: 70.7
coord: 135..146
score: 76.67
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 134..197
e-value: 1.3E-37
score: 141.0
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 134..183
e-value: 3.4E-14
score: 52.7
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 134..191
score: 25.014
IPR001471AP2/ERF domainCDDcd00018AP2coord: 134..192
e-value: 2.70888E-20
score: 80.3935
IPR036955AP2/ERF domain superfamilyGENE3DG3DSA:3.30.730.10coord: 133..194
e-value: 4.6E-32
score: 111.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..133
NoneNo IPR availablePANTHERPTHR31190:SF41ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13-RELATEDcoord: 66..204
NoneNo IPR availablePANTHERPTHR31190FAMILY NOT NAMEDcoord: 66..204
IPR016177DNA-binding domain superfamilySUPERFAMILYSSF54171DNA-binding domaincoord: 134..192