CSPI01G00060 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G00060
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Ethylene-responsive transcription factor
Location	Chr1 : 37596 .. 38512 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGTTAAAAGTATTCAAGTAAGAATAAAATATTTTGTAAAATAAACCAACCAAACACAAGTGTGTAAAAAGTTTTTTGCTTTTATTTTTTTATTTTAAATTTATTGTTTTAACAAATGAGAAAGCCATAACAAAATCTATATATAGAGAGAGAGGATAGGTTGGTAAGGGAAAAGGGGCACCCCGGAGAAGGTATATCAAGGAAAGGGAAAAATTAAAAGTGGATCCGAAGCGAGGGAAGAGAGCACTTTGTTCCGATGAATCGGAGGAAGAAAATCCGTTCCCGATCTACTCAGCTAGATCTGAATATGACACGTCGGCGATGGTATCTGCGTTAACTCAAGTGATAACGAGTGGGAGTGGGAGTGGGAGTGGGAGTAGCAGAAGCCTATCAGTAGTAGAAGAACCTGCAGCATCAGCGCGGGGAGATAATGAAGAAGGAGTGAAAAGGGAAAGCCGACATTATCGAGGAGTAAGGCAGAGACCGTGGGGAAAATGGGCTGCTGAGATTCGTGATCCAAAAAAGGCAGCAAGAGTGTGGTTGGGCACCTTTGACACTGCCGAGGCTGCGGCACTTGCTTACGATGAAGCTGCCCTCAGATTTAAGGGCACAAAAGCCAAGCTTAACTTCCCCGAGAGACTTACCACCCCACCATCATACCCCTATGCCCCCTATCATCATCAGGATGATTACCAAAACCACCGCTTTTAGTTTAATTTAATTACTTATTGTTAATCTTGTTTTTAATTCACTTACCTAGCTAGCTGCCACTATATATCTTTAATTACTTTTCACGTTCTATATATATTTTGATTTTTCTCAGCAACTACTTATAAAATTATGATTATATATGCAGTACATCCCAGTTGTAACATTCACATAAGGCGTTTTGCATACTTATATACGTCCCCAG

mRNA sequence

ATGAATGTTAAAAGTATTCAAGTTGGTAAGGGAAAAGGGGCACCCCGGAGAAGGTATATCAAGGAAAGGGAAAAATTAAAAGTGGATCCGAAGCGAGGGAAGAGAGCACTTTGTTCCGATGAATCGGAGGAAGAAAATCCGTTCCCGATCTACTCAGCTAGATCTGAATATGACACGTCGGCGATGGTATCTGCGTTAACTCAAGTGATAACGAGTGGGAGTGGGAGTGGGAGTGGGAGTAGCAGAAGCCTATCAGTAGTAGAAGAACCTGCAGCATCAGCGCGGGGAGATAATGAAGAAGGAGTGAAAAGGGAAAGCCGACATTATCGAGGAGTAAGGCAGAGACCGTGGGGAAAATGGGCTGCTGAGATTCGTGATCCAAAAAAGGCAGCAAGAGTGTGGTTGGGCACCTTTGACACTGCCGAGGCTGCGGCACTTGCTTACGATGAAGCTGCCCTCAGATTTAAGGGCACAAAAGCCAAGCTTAACTTCCCCGAGAGACTTACCACCCCACCATCATACCCCTATGCCCCCTATCATCATCAGGATGATTACCAAAACCACCGCTTTTAG

Coding sequence (CDS)

ATGAATGTTAAAAGTATTCAAGTTGGTAAGGGAAAAGGGGCACCCCGGAGAAGGTATATCAAGGAAAGGGAAAAATTAAAAGTGGATCCGAAGCGAGGGAAGAGAGCACTTTGTTCCGATGAATCGGAGGAAGAAAATCCGTTCCCGATCTACTCAGCTAGATCTGAATATGACACGTCGGCGATGGTATCTGCGTTAACTCAAGTGATAACGAGTGGGAGTGGGAGTGGGAGTGGGAGTAGCAGAAGCCTATCAGTAGTAGAAGAACCTGCAGCATCAGCGCGGGGAGATAATGAAGAAGGAGTGAAAAGGGAAAGCCGACATTATCGAGGAGTAAGGCAGAGACCGTGGGGAAAATGGGCTGCTGAGATTCGTGATCCAAAAAAGGCAGCAAGAGTGTGGTTGGGCACCTTTGACACTGCCGAGGCTGCGGCACTTGCTTACGATGAAGCTGCCCTCAGATTTAAGGGCACAAAAGCCAAGCTTAACTTCCCCGAGAGACTTACCACCCCACCATCATACCCCTATGCCCCCTATCATCATCAGGATGATTACCAAAACCACCGCTTTTAG

Homology

[Close]

BLAST of CSPI01G00060 vs. Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-37
Identity = 94/160 (58.75%), Postives = 110/160 (68.75%), Query Frame = 1


Query: 33  GKRALCSDESEE-------ENPFPIYSARSEYDTSAMVSALTQVITSGSGSGSGSSRSLS 92
           GKR    DES+E       EN FP +SARS+YD  AMVSALTQVI + S S   +     
Sbjct: 8   GKRPFRGDESDEKKEADDDENIFPFFSARSQYDMRAMVSALTQVIGNQSSSHDNNQHQPV 67

Query: 93  VV--EEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEA 152
           V   ++P   A    ++G+ R+ RHYRGVRQRPWGKWAAEIRDP+KAARVWLGTF+TAEA
Sbjct: 68  VYNQQDPNPPAPPTQDQGLLRK-RHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEA 127

Query: 153 AALAYDEAALRFKGTKAKLNFPER---------LTTPPSY 175
           AALAYD AAL+FKG+KAKLNFPER          T PP+Y
Sbjct: 128 AALAYDNAALKFKGSKAKLNFPERAQLASNTSTTTGPPNY 166

[Close]

BLAST of CSPI01G00060 vs. Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-35
Identity = 87/147 (59.18%), Postives = 104/147 (70.75%), Query Frame = 1


Query: 33  GKRALCSDESEE----ENPFPIYSARSEYDTSAMVSALTQVITSGSGSGSGSSRSL---- 92
           GKR    DESEE    EN FP++SARS++D   MVSALTQVI +       +  S+    
Sbjct: 3   GKRPFGGDESEEREEDENLFPVFSARSQHDMRVMVSALTQVIGNQQSKSHDNISSIDDNY 62

Query: 93  -SVV--EEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTA 152
            SV   ++P       +++      RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TA
Sbjct: 63  PSVYNPQDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETA 122

Query: 153 EAAALAYDEAALRFKGTKAKLNFPERL 169
           E+AALAYDEAAL+FKG+KAKLNFPER+
Sbjct: 123 ESAALAYDEAALKFKGSKAKLNFPERV 149

[Close]

BLAST of CSPI01G00060 vs. Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 2.3e-27
Identity = 76/141 (53.90%), Postives = 90/141 (63.83%), Query Frame = 1


Query: 60  SAMVSALTQVITS----------GSGSGSGSSRSLSVVEE---PAASARGDNE------- 119
           SAMVSALTQV+++           S S +G  R    ++    P++ AR D+        
Sbjct: 2   SAMVSALTQVVSARSQTEAEGAHSSSSSAGHKRGWLGIDSAPIPSSFARVDSSHNPIEES 61

Query: 120 ------EGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAAL 173
                 E  + + R YRGVRQRPWGKWAAEIRDP +AARVWLGTFDTAEAAA AYDEAAL
Sbjct: 62  MSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAAL 121

[Close]

BLAST of CSPI01G00060 vs. Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 8.7e-27
Identity = 71/120 (59.17%), Postives = 85/120 (70.83%), Query Frame = 1


Query: 62  MVSALTQVITSGSGSGSGSSRSLSVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWA 121
           MVSAL++VI + +          S   +P       +++  +R  RHYRGVRQRPWGKWA
Sbjct: 1   MVSALSRVIENPTDPPVKQELDKSDQHQP-------DQDQPRR--RHYRGVRQRPWGKWA 60

Query: 122 AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERL---TTPPSYPYAP 179
           AEIRDPKKAARVWLGTF+TAE AALAYD AAL+FKGTKAKLNFPER+   TT  +  +AP
Sbjct: 61  AEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTTTTTISHAP 111

[Close]

BLAST of CSPI01G00060 vs. Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.8e-25
Identity = 74/148 (50.00%), Postives = 83/148 (56.08%), Query Frame = 1


Query: 33  GKRALCSDES----EEENPFPIYSARSEYDTSAMVSALTQVITSGSGSGSGSSRSLSVVE 92
           GKR L  +      EE+      S  SE D S  VS LT      S     SS +L    
Sbjct: 4   GKRPLSPESMAGNREEKKELCCCSTLSESDVSDFVSELTGQPIPSSIDDQSSSLTL---- 63

Query: 93  EPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAY 152
                     +E      R+YRGVRQRPWGKWAAEIRDP KAARVWLGTFDTAE AALAY
Sbjct: 64  ----------QEKSNSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAY 123

Query: 153 DEAALRFKGTKAKLNFPERLTTPPSYPY 177
           D+AA  F+G KAKLNFPE +   P+  Y
Sbjct: 124 DKAAFEFRGHKAKLNFPEHIRVNPTQLY 137

[Close]

BLAST of CSPI01G00060 vs. TrEMBL
Match: A0A0A0LTV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000550 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 7.7e-91
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1


Query: 18  RYIKEREKLKVDPKRGKRALCSDESEEENPFPIYSARSEYDTSAMVSALTQVITSGSGSG 77
           RYIKEREKLKVDPKRGKRALCSDESEEENPFPIYSARSEYDTSAMVSALTQVITSGSGSG
Sbjct: 44  RYIKEREKLKVDPKRGKRALCSDESEEENPFPIYSARSEYDTSAMVSALTQVITSGSGSG 103

Query: 78  SGSSRSLSVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGT 137
           SGSSRSLSVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGT
Sbjct: 104 SGSSRSLSVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGT 163

Query: 138 FDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHHQDDYQNHRF 191
           FDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHHQDDYQNHRF
Sbjct: 164 FDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHHQDDYQNHRF 216

[Close]

BLAST of CSPI01G00060 vs. TrEMBL
Match: E5GBL4_CUCME (AP2 domain transcription factor RAP2.3 OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 5.2e-63
Identity = 125/129 (96.90%), Postives = 127/129 (98.45%), Query Frame = 1


Query: 62  MVSALTQVITSGSGSGSGSSRSLSVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWA 121
           MVSALTQVITSGSGSGSGSSRSLSVVEEPAAS RGDNEEGVKRESRHYRGVRQRPWGKWA
Sbjct: 1   MVSALTQVITSGSGSGSGSSRSLSVVEEPAASVRGDNEEGVKRESRHYRGVRQRPWGKWA 60

Query: 122 AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHH 181
           AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSY YAPYHH
Sbjct: 61  AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYSYAPYHH 120

Query: 182 QDDYQNHRF 191
           QDD+Q+HRF
Sbjct: 121 QDDHQDHRF 129

[Close]

BLAST of CSPI01G00060 vs. TrEMBL
Match: K4DF15_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.9e-39
Identity = 98/169 (57.99%), Postives = 119/169 (70.41%), Query Frame = 1


Query: 28  VDPKRGKRALCSDESEEENP--FPIYSARSEYDTSAMVSALTQVITSGSG----SGSGSS 87
           VD + GKR   S+E EE+    FPIYSARS++D SAMVS L+QVI++ +     S S S 
Sbjct: 2   VDRRYGKRPFSSNEWEEKEDINFPIYSARSQHDMSAMVSVLSQVISNTNNTTNISSSSSM 61

Query: 88  RSLSVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTA 147
             +  +  P  +    +E+G ++  RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTA
Sbjct: 62  HEIDPLTLPQPTTNQIHEQGNQQRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTA 121

Query: 148 EAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHHQDDYQNHRF 191
           EAAALAYDEAALRFKG KAKLNFPER+ +  +  Y    HQ   Q++ F
Sbjct: 122 EAAALAYDEAALRFKGNKAKLNFPERVQS-GNTQYLTTTHQQQQQHYAF 169

[Close]

BLAST of CSPI01G00060 vs. TrEMBL
Match: A0A061FZL7_THECC (Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_014762 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.7e-37
Identity = 93/163 (57.06%), Postives = 114/163 (69.94%), Query Frame = 1


Query: 17  RRYIKER--EKLKVDPKRGKRALCSDESEEENP---FPIYSARSEYDTSAMVSALTQVIT 76
           + YIK    +  KVDP++GKR L  DESEE+     FP+YSARS+ D +AMV AL QVI 
Sbjct: 10  KAYIKGENPKTYKVDPRQGKRPLSPDESEEKEEDHIFPVYSARSQQDMNAMVQALAQVIG 69

Query: 77  SGSGSGSGSSRSLS------VVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIR 136
           + + + + +S            +   A  +  +++      RHYRGVRQRPWGKWAAEIR
Sbjct: 70  NNNSNNNNNSNPFQPHDQHPTYQSDTAGQQNQSQDQGNVRRRHYRGVRQRPWGKWAAEIR 129

Query: 137 DPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERL 169
           DPKKAARVWLGTF+TAEAAALAYDEAALRFKG+KAKLNFPER+
Sbjct: 130 DPKKAARVWLGTFETAEAAALAYDEAALRFKGSKAKLNFPERV 172

[Close]

BLAST of CSPI01G00060 vs. TrEMBL
Match: D7M0H8_ARALL (Putative uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_487556 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.8e-37
Identity = 96/160 (60.00%), Postives = 113/160 (70.62%), Query Frame = 1


Query: 33  GKRALCSDESEE-------ENPFPIYSARSEYDTSAMVSALTQVITSGSGSGSGSSRSLS 92
           GKR   +DES+E       EN FP +SARS+YDT AMVSALTQVI + S S   +     
Sbjct: 8   GKRPFRADESDEKKEGDDDENIFPFFSARSQYDTRAMVSALTQVIGNQSSSHDNTQHQPV 67

Query: 93  VVEE--PAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEA 152
           V  +  P   A    ++G+ R+ RHYRGVRQRPWGKWAAEIRDP+KAARVWLGTF+TAEA
Sbjct: 68  VYNQQNPNQPAPPTQDQGLVRK-RHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEA 127

Query: 153 AALAYDEAALRFKGTKAKLNFPER---------LTTPPSY 175
           AALAYDEAAL+FKG+KAKLNFPER         +T PP+Y
Sbjct: 128 AALAYDEAALKFKGSKAKLNFPERAQLASNTNSITGPPNY 166

[Close]

BLAST of CSPI01G00060 vs. TAIR10
Match: AT5G07310.1 (AT5G07310.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 157.9 bits (398), Expect = 6.1e-39
Identity = 94/160 (58.75%), Postives = 110/160 (68.75%), Query Frame = 1


Query: 33  GKRALCSDESEE-------ENPFPIYSARSEYDTSAMVSALTQVITSGSGSGSGSSRSLS 92
           GKR    DES+E       EN FP +SARS+YD  AMVSALTQVI + S S   +     
Sbjct: 8   GKRPFRGDESDEKKEADDDENIFPFFSARSQYDMRAMVSALTQVIGNQSSSHDNNQHQPV 67

Query: 93  VV--EEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEA 152
           V   ++P   A    ++G+ R+ RHYRGVRQRPWGKWAAEIRDP+KAARVWLGTF+TAEA
Sbjct: 68  VYNQQDPNPPAPPTQDQGLLRK-RHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEA 127

Query: 153 AALAYDEAALRFKGTKAKLNFPER---------LTTPPSY 175
           AALAYD AAL+FKG+KAKLNFPER          T PP+Y
Sbjct: 128 AALAYDNAALKFKGSKAKLNFPERAQLASNTSTTTGPPNY 166

[Close]

BLAST of CSPI01G00060 vs. TAIR10
Match: AT5G61890.1 (AT5G61890.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 151.0 bits (380), Expect = 7.5e-37
Identity = 87/147 (59.18%), Postives = 104/147 (70.75%), Query Frame = 1


Query: 33  GKRALCSDESEE----ENPFPIYSARSEYDTSAMVSALTQVITSGSGSGSGSSRSL---- 92
           GKR    DESEE    EN FP++SARS++D   MVSALTQVI +       +  S+    
Sbjct: 3   GKRPFGGDESEEREEDENLFPVFSARSQHDMRVMVSALTQVIGNQQSKSHDNISSIDDNY 62

Query: 93  -SVV--EEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTA 152
            SV   ++P       +++      RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TA
Sbjct: 63  PSVYNPQDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETA 122

Query: 153 EAAALAYDEAALRFKGTKAKLNFPERL 169
           E+AALAYDEAAL+FKG+KAKLNFPER+
Sbjct: 123 ESAALAYDEAALKFKGSKAKLNFPERV 149

[Close]

BLAST of CSPI01G00060 vs. TAIR10
Match: AT5G50080.1 (AT5G50080.1 ethylene response factor 110)

HSP 1 Score: 123.6 bits (309), Expect = 1.3e-28
Identity = 76/141 (53.90%), Postives = 90/141 (63.83%), Query Frame = 1


Query: 60  SAMVSALTQVITS----------GSGSGSGSSRSLSVVEE---PAASARGDNE------- 119
           SAMVSALTQV+++           S S +G  R    ++    P++ AR D+        
Sbjct: 2   SAMVSALTQVVSARSQTEAEGAHSSSSSAGHKRGWLGIDSAPIPSSFARVDSSHNPIEES 61

Query: 120 ------EGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAAL 173
                 E  + + R YRGVRQRPWGKWAAEIRDP +AARVWLGTFDTAEAAA AYDEAAL
Sbjct: 62  MSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAAL 121

[Close]

BLAST of CSPI01G00060 vs. TAIR10
Match: AT5G13330.1 (AT5G13330.1 related to AP2 6l)

HSP 1 Score: 121.7 bits (304), Expect = 4.9e-28
Identity = 71/120 (59.17%), Postives = 85/120 (70.83%), Query Frame = 1


Query: 62  MVSALTQVITSGSGSGSGSSRSLSVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWA 121
           MVSAL++VI + +          S   +P       +++  +R  RHYRGVRQRPWGKWA
Sbjct: 1   MVSALSRVIENPTDPPVKQELDKSDQHQP-------DQDQPRR--RHYRGVRQRPWGKWA 60

Query: 122 AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERL---TTPPSYPYAP 179
           AEIRDPKKAARVWLGTF+TAE AALAYD AAL+FKGTKAKLNFPER+   TT  +  +AP
Sbjct: 61  AEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTTTTTISHAP 111

[Close]

BLAST of CSPI01G00060 vs. TAIR10
Match: AT2G33710.2 (AT2G33710.2 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 115.9 bits (289), Expect = 2.7e-26
Identity = 74/148 (50.00%), Postives = 83/148 (56.08%), Query Frame = 1


Query: 33  GKRALCSDES----EEENPFPIYSARSEYDTSAMVSALTQVITSGSGSGSGSSRSLSVVE 92
           GKR L  +      EE+      S  SE D S  VS LT      S     SS +L    
Sbjct: 4   GKRPLSPESMAGNREEKKELCCCSTLSESDVSDFVSELTGQPIPSSIDDQSSSLTL---- 63

Query: 93  EPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAY 152
                     +E      R+YRGVRQRPWGKWAAEIRDP KAARVWLGTFDTAE AALAY
Sbjct: 64  ----------QEKSNSRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAY 123

Query: 153 DEAALRFKGTKAKLNFPERLTTPPSYPY 177
           D+AA  F+G KAKLNFPE +   P+  Y
Sbjct: 124 DKAAFEFRGHKAKLNFPEHIRVNPTQLY 137

[Close]

BLAST of CSPI01G00060 vs. NCBI nr
Match: gi|700208335|gb|KGN63431.1| (hypothetical protein Csa_1G000550 [Cucumis sativus])

HSP 1 Score: 341.3 bits (874), Expect = 1.1e-90
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1


Query: 18  RYIKEREKLKVDPKRGKRALCSDESEEENPFPIYSARSEYDTSAMVSALTQVITSGSGSG 77
           RYIKEREKLKVDPKRGKRALCSDESEEENPFPIYSARSEYDTSAMVSALTQVITSGSGSG
Sbjct: 44  RYIKEREKLKVDPKRGKRALCSDESEEENPFPIYSARSEYDTSAMVSALTQVITSGSGSG 103

Query: 78  SGSSRSLSVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGT 137
           SGSSRSLSVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGT
Sbjct: 104 SGSSRSLSVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGT 163

Query: 138 FDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHHQDDYQNHRF 191
           FDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHHQDDYQNHRF
Sbjct: 164 FDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHHQDDYQNHRF 216

[Close]

BLAST of CSPI01G00060 vs. NCBI nr
Match: gi|449440490|ref|XP_004138017.1| (PREDICTED: ethylene-responsive transcription factor ERF115 [Cucumis sativus])

HSP 1 Score: 257.3 bits (656), Expect = 2.1e-65
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1


Query: 62  MVSALTQVITSGSGSGSGSSRSLSVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWA 121
           MVSALTQVITSGSGSGSGSSRSLSVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWA
Sbjct: 1   MVSALTQVITSGSGSGSGSSRSLSVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWA 60

Query: 122 AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHH 181
           AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHH
Sbjct: 61  AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHH 120

Query: 182 QDDYQNHRF 191
           QDDYQNHRF
Sbjct: 121 QDDYQNHRF 129

[Close]

BLAST of CSPI01G00060 vs. NCBI nr
Match: gi|659128773|ref|XP_008464362.1| (PREDICTED: ethylene-responsive transcription factor ERF115 [Cucumis melo])

HSP 1 Score: 248.8 bits (634), Expect = 7.5e-63
Identity = 125/129 (96.90%), Postives = 127/129 (98.45%), Query Frame = 1


Query: 62  MVSALTQVITSGSGSGSGSSRSLSVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWA 121
           MVSALTQVITSGSGSGSGSSRSLSVVEEPAAS RGDNEEGVKRESRHYRGVRQRPWGKWA
Sbjct: 1   MVSALTQVITSGSGSGSGSSRSLSVVEEPAASVRGDNEEGVKRESRHYRGVRQRPWGKWA 60

Query: 122 AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHH 181
           AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSY YAPYHH
Sbjct: 61  AEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYSYAPYHH 120

Query: 182 QDDYQNHRF 191
           QDD+Q+HRF
Sbjct: 121 QDDHQDHRF 129

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BLAST of CSPI01G00060 vs. NCBI nr
Match: gi|971549058|ref|XP_015163844.1| (PREDICTED: ethylene-responsive transcription factor ERF114-like [Solanum tuberosum])

HSP 1 Score: 169.9 bits (429), Expect = 4.4e-39
Identity = 103/175 (58.86%), Postives = 123/175 (70.29%), Query Frame = 1


Query: 28  VDPKRGKRALCSDESEE-----ENPFPIYSARSEYDTSAMVSALTQVI--TSGSGSGSGS 87
           VD + GKR   S+ESEE     E+ FPIYSARS++D SAMVS L+QVI  T+ S + +  
Sbjct: 74  VDRRYGKRPFSSNESEEKEDINESIFPIYSARSQHDMSAMVSVLSQVIGNTNNSNNTTNI 133

Query: 88  SRSLSV-----VEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWL 147
           S S SV     +  P ++     E+G ++  RHYRGVRQRPWGKWAAEIRDPKKAARVWL
Sbjct: 134 SSSSSVHGINPLTLPQSTTNQIQEQGNEQRKRHYRGVRQRPWGKWAAEIRDPKKAARVWL 193

Query: 148 GTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHHQDDYQNHRF 191
           GTFDTAEAAALAYDEAALRFKG KAKLNFPER+ +  +  Y    HQ   Q++ F
Sbjct: 194 GTFDTAEAAALAYDEAALRFKGNKAKLNFPERVQS-GNTQYLTTTHQQQQQHYTF 247

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BLAST of CSPI01G00060 vs. NCBI nr
Match: gi|723750672|ref|XP_004252471.2| (PREDICTED: ethylene-responsive transcription factor ERF114-like [Solanum lycopersicum])

HSP 1 Score: 168.7 bits (426), Expect = 9.9e-39
Identity = 98/169 (57.99%), Postives = 119/169 (70.41%), Query Frame = 1


Query: 28  VDPKRGKRALCSDESEEENP--FPIYSARSEYDTSAMVSALTQVITSGSG----SGSGSS 87
           VD + GKR   S+E EE+    FPIYSARS++D SAMVS L+QVI++ +     S S S 
Sbjct: 2   VDRRYGKRPFSSNEWEEKEDINFPIYSARSQHDMSAMVSVLSQVISNTNNTTNISSSSSM 61

Query: 88  RSLSVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTA 147
             +  +  P  +    +E+G ++  RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTA
Sbjct: 62  HEIDPLTLPQPTTNQIHEQGNQQRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTA 121

Query: 148 EAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHHQDDYQNHRF 191
           EAAALAYDEAALRFKG KAKLNFPER+ +  +  Y    HQ   Q++ F
Sbjct: 122 EAAALAYDEAALRFKGNKAKLNFPERVQS-GNTQYLTTTHQQQQQHYAF 169

The following BLAST results are available for this feature:

BLAST of CSPI01G00060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EF115_ARATH	1.1e-37	58.75	Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF11...	[more]
EF114_ARATH	1.3e-35	59.18	Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF11...	[more]
EF110_ARATH	2.3e-27	53.90	Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF11...	[more]
EF113_ARATH	8.7e-27	59.17	Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF11...	[more]
EF112_ARATH	4.8e-25	50.00	Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF11...	[more]

BLAST of CSPI01G00060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTV8_CUCSA	7.7e-91	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000550 PE=4 SV=1	[more]
E5GBL4_CUCME	5.2e-63	96.90	AP2 domain transcription factor RAP2.3 OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
K4DF15_SOLLC	6.9e-39	57.99	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A061FZL7_THECC	1.7e-37	57.06	Integrase-type DNA-binding superfamily protein, putative OS=Theobroma cacao GN=T...	[more]
D7M0H8_ARALL	3.8e-37	60.00	Putative uncharacterized protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata ...	[more]

BLAST of CSPI01G00060 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07310.1	6.1e-39	58.75	Integrase-type DNA-binding superfamily protein	[more]
AT5G61890.1	7.5e-37	59.18	Integrase-type DNA-binding superfamily protein	[more]
AT5G50080.1	1.3e-28	53.90	ethylene response factor 110	[more]
AT5G13330.1	4.9e-28	59.17	related to AP2 6l	[more]
AT2G33710.2	2.7e-26	50.00	Integrase-type DNA-binding superfamily protein	[more]

BLAST of CSPI01G00060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700208335\|gb\|KGN63431.1\|	1.1e-90	100.00	hypothetical protein Csa_1G000550 [Cucumis sativus]	[more]
gi\|449440490\|ref\|XP_004138017.1\|	2.1e-65	100.00	PREDICTED: ethylene-responsive transcription factor ERF115 [Cucumis sativus]	[more]
gi\|659128773\|ref\|XP_008464362.1\|	7.5e-63	96.90	PREDICTED: ethylene-responsive transcription factor ERF115 [Cucumis melo]	[more]
gi\|971549058\|ref\|XP_015163844.1\|	4.4e-39	58.86	PREDICTED: ethylene-responsive transcription factor ERF114-like [Solanum tuberos...	[more]
gi\|723750672\|ref\|XP_004252471.2\|	9.9e-39	57.99	PREDICTED: ethylene-responsive transcription factor ERF114-like [Solanum lycoper...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0032008	positive regulation of TOR signaling
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G00060.1	CSPI01G00060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 109..120 score: 7.9E-12coord: 131..147 score: 7.9
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 107..166 score: 3.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 108..157 score: 1.8
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 108..171 score: 1.3
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 108..165 score: 25
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 108..166 score: 2.03
None	No IPR available	PANTHER	PTHR31190	FAMILY NOT NAMED	coord: 39..167 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G00060	Cla019324	Watermelon (97103) v1	cpiwmB099
CSPI01G00060	Csa1G000550	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G00060	MELO3C026158	Melon (DHL92) v3.5.1	cpimeB055
CSPI01G00060	ClCG06G018370	Watermelon (Charleston Gray)	cpiwcgB083
CSPI01G00060	Lsi06G016870	Bottle gourd (USVL1VR-Ls)	cpilsiB070
CSPI01G00060	Lsi09G017700	Bottle gourd (USVL1VR-Ls)	cpilsiB001
CSPI01G00060	MELO3C026158.2	Melon (DHL92) v3.6.1	cpimedB049
CSPI01G00060	CsaV3_6G007740	Cucumber (Chinese Long) v3	cpicucB053
CSPI01G00060	CsaV3_1G000060	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G00060	Cla97C06G128180	Watermelon (97103) v2	cpiwmbB079
CSPI01G00060	Bhi02G000464	Wax gourd	cpiwgoB081
CSPI01G00060	Cucsa.156890	Cucumber (Gy14) v1	cgycpiB229
CSPI01G00060	CmaCh10G000100	Cucurbita maxima (Rimu)	cmacpiB049
CSPI01G00060	CmoCh10G000080	Cucurbita moschata (Rifu)	cmocpiB040
CSPI01G00060	CsGy1G000050	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G00060	Carg10239	Silver-seed gourd	carcpiB0396

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G00060	Cucurbita maxima (Rimu)	cmacpiB085
CSPI01G00060	Cucurbita moschata (Rifu)	cmocpiB079
CSPI01G00060	Cucurbita pepo (Zucchini)	cpecpiB361
CSPI01G00060	Cucurbita pepo (Zucchini)	cpecpiB656
CSPI01G00060	Silver-seed gourd	carcpiB0642